>GFRA2_CHICK (O13157) GDNF family receptor alpha-2 precursor (GFR-alpha-2)|
           (Neurturin receptor alpha) (NTNR-alpha) (NRTNR-alpha)
           (GDNF receptor beta) (GDNFR-beta)
          Length = 465

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 277 PLGKSLQSWRRPVLLLRPNKLC 212
           P G+ LQ WR PV  +R NKLC
Sbjct: 26  PPGQDLQGWRVPVDCIRANKLC 47

>SYC_XANAC (Q8PK23) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 476

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 330 VAQESCSPGRGTRFHAWCHSGSPSRAGAAQSYSCGPI 220
           +AQ  C+ G  T    W H+G  + +GA  S S G I
Sbjct: 241 IAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNI 277

>SYC_XYLFT (Q87EL7) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 467

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 330 VAQESCSPGRGTRFHAWCHSGSPSRAGAAQSYSCGPI 220
           +AQ  C+ G  T    W H+G  +  GA  S S G I
Sbjct: 239 IAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNI 275

>SYC_XYLFA (Q9PEN3) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 467

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 330 VAQESCSPGRGTRFHAWCHSGSPSRAGAAQSYSCGPI 220
           +AQ  C+ G  T    W H+G  +  GA  S S G I
Sbjct: 239 IAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNI 275

>PIGF_HUMAN (Q07326) Phosphatidylinositol-glycan biosynthesis, class F protein|
           (PIG-F) (GPI11 homolog)
          Length = 219

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = -2

Query: 316 LLTRTRNTVPCLVPLGKSLQSW-----RRPVLLLRPNKLCLSVFLFFFGAF 179
           ++  T  TVPCL  LG +L++W     R  V  +  N L ++    F GA+
Sbjct: 117 VILSTFTTVPCLCLLGPNLKAWLRVFSRNGVTSIWENSLQITTISSFVGAW 167

>IM23_SCHJA (P27591) 23 kDa integral membrane protein (Sj23)|
          Length = 218

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -2

Query: 283 LVPLGKSLQSWRRPVLLLRPNKLCLSVFLFFFGAFTIFSLNSYILSVHLVWQFKIISIIL 104
           +  LG  ++  +  V +L    L  S+ L   GA+     + Y  ++H VWQ   I+II+
Sbjct: 1   MATLGTGMRCLKSCVFILNIICLLCSLVLIGAGAYVEVKFSQYEANLHKVWQAAPIAIIV 60

>Y267_AQUAE (O66624) Hypothetical protein aq_267|
          Length = 378

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 220 KLCLSVFLFFFGAFTIFSLNSYILSVHLVWQFKI 119
           +L L + L+ FGAFTIF    ++L   +VW +K+
Sbjct: 275 RLHLDLILYGFGAFTIFGGMLHLLP-RIVWNWKV 307

>ALG10_ASHGO (Q75AQ8) Alpha-1,2 glucosyltransferase ALG10 (EC 2.4.1.-)|
           (Alpha-2-glucosyltransferase ALG10)
           (Dolichyl-phosphoglucose-dependent glucosyltransferase
           ALG10) (Asparagine-linked glycosylation protein 10)
          Length = 509

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -2

Query: 262 LQSWRRPVLLLRPNKLCLSVFLFFFGAFTIFSLNSYILSVHLVWQFKIISII 107
           +++W   VL    N     +FL + G+ T+   +S++   HLV  F  +  I
Sbjct: 244 IENWNSLVLPYAVNFALFLIFLLYNGSVTLGDKSSHVAGFHLVQMFYCLLFI 295

>Y086_MYCPN (P75607) Hypothetical protein MPN086 (R02_orf105)|
          Length = 105

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 214 CLSVFLFFFGAFTIFSLNSYILSVHLVWQFKIISIILGRA 95
           C+++ LF F  ++ F  N       L W F +++I+ G A
Sbjct: 43  CIAIDLFRFDLYSQFFFNHLSTLSALAWTFFVLAILFGAA 82

>RIR2_SHV21 (Q01038) Ribonucleoside-diphosphate reductase small chain (EC|
           1.17.4.1) (Ribonucleotide reductase small subunit)
          Length = 305

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 294 VFLVLVSNFLAQHFLKINLFHGLGILNSVCL 386
           +FL++   F    F  I LF   GI+N +CL
Sbjct: 152 LFLLVEGIFFISSFFSIGLFRVRGIMNGICL 182

>PIGF_MOUSE (O09101) Phosphatidylinositol-glycan biosynthesis, class F protein|
           (PIG-F)
          Length = 219

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -2

Query: 304 TRNTVPCLVPLGKSLQSW-----RRPVLLLRPNKLCLSVFLFFFGAF 179
           T  TVPCL  LG +L++W     R  V  +  N L ++    F GA+
Sbjct: 121 TFTTVPCLCLLGPNLKAWLRVFSRNGVTSIWENSLQITTISSFTGAW 167

>SYC_NEIMB (Q9JXE6) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 473

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 242 WAAPALEGLPEWHQAWNRVPRPGEQLSCATLSQN 343
           W A A  G P W   W    RPG  + C+ +S+N
Sbjct: 184 WKA-AKAGEPAWESPWGN-GRPGWHIECSAMSEN 215

>SYC_AZOBR (O07045) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 448

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 251 PALEGLPEWHQAWNRVPRPGEQLSCATLSQ 340
           P+ +G P W   W R  RPG  + C+ +++
Sbjct: 183 PSTDGQPGWDSPWGR-GRPGWHIECSAMAK 211

>SYC_NEIMA (Q9JWJ3) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 699

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 242 WAAPALEGLPEWHQAWNRVPRPGEQLSCATLSQN 343
           W A A  G P W   W    RPG  + C+ +S+N
Sbjct: 410 WKA-AKAGEPAWESPWGN-GRPGWHIECSAMSEN 441

>ISPZ_BUCAI (P57363) Probable intracellular septation protein|
          Length = 177

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 223 NKLCLSVFL--FFFGAFTIFSLNSYILSVHLVWQFKIISII 107
           +K+ L  FL  FFFG+ TIF  NS  +     W+  II II
Sbjct: 48  DKISLFSFLSVFFFGSLTIFFHNSQFIK----WKITIIYII 84

>ZFP95_MOUSE (Q9Z1D8) Zinc finger protein 95 (Zfp-95)|
          Length = 819

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -3

Query: 315 CSPGRGTRFHAWCHSGSPSRAGAAQSYSCGPISFAYL 205
           C  G G R H   H    SR  + Q + CG I F Y+
Sbjct: 629 CGKGFGRRSHLAGHLRLHSRDKSHQCHECGEIFFQYV 665

>SYC_XANCP (Q8P8J0) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 457

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 330 VAQESCSPGRGTRFHAWCHSGSPSRAGAAQSYSCGPI 220
           +AQ  C+ G       W H+G  + +GA  S S G I
Sbjct: 241 IAQSECAHGGAVFARFWLHNGMLNFSGAKMSKSLGNI 277

>ADCY4_HUMAN (Q8NFM4) Adenylate cyclase type 4 (EC 4.6.1.1) (Adenylate cyclase|
           type IV) (ATP pyrophosphate-lyase 4) (Adenylyl cyclase
           4)
          Length = 1077

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -2

Query: 247 RPVLLLRPNKL-CLSVFLFFFGAFTIFSLNSYILSVHLVWQFKI 119
           RP +L  P  +  +S F+FFF    +   N Y   +  +W+ K+
Sbjct: 781 RPGVLKEPKLMGAISFFIFFFTLLVLARQNEYYCRLDFLWKKKL 824


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,589,901
Number of Sequences: 219361
Number of extensions: 964688
Number of successful extensions: 3154
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3154
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)