ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61e02 |
|---|---|
| Clone Library Name | barley_pub |
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 46.2 bits (108), Expect = 6e-05 Identities = 21/68 (30%), Positives = 39/68 (57%) Frame = -2 Query: 537 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 358 GQ+ + + ++R++ I+D GIK + ++ E+A + C+E +NRP MKEV Sbjct: 302 GQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEV 361 Query: 357 AEKLDRLR 334 E L+ ++ Sbjct: 362 VEVLEHIQ 369
>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC| 2.7.11.1) Length = 901 Score = 40.0 bits (92), Expect = 0.004 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Frame = -2 Query: 498 MKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDR-LRKVMH 322 +K + ILD + ++E L++IA +A C+ M G++RPSM +V L+ L +M Sbjct: 728 IKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALEHALALLMG 787 Query: 321 HPWVQRNPEEMESLLG 274 P +++ E +LG Sbjct: 788 SPCIEQPILPTEVVLG 803
>HSP77_YEAST (P12398) Heat shock protein SSC1, mitochondrial precursor| (Endonuclease SCEI 75 kDa subunit) (mtHSP70) Length = 654 Score = 34.7 bits (78), Expect = 0.18 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = -2 Query: 543 AIGQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMK 364 A +D S+++ S + EN +E +++D K + E ++ E A +++ + S+K Sbjct: 515 ATNKDSSITVAGSSGLSENEIEQMVNDAEKFKSQDEARKQAIETANKADQLANDTENSLK 574 Query: 363 EVAEKLDR 340 E K+D+ Sbjct: 575 EFEGKVDK 582
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 34.7 bits (78), Expect = 0.18 Identities = 20/70 (28%), Positives = 35/70 (50%) Frame = -2 Query: 498 MKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHH 319 +KE +LE ++D ++ E +E++ ++A C + S RP M EV L+ + Sbjct: 513 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE--GDGLAE 570 Query: 318 PWVQRNPEEM 289 W + EEM Sbjct: 571 RWEEWQKEEM 580
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 34.7 bits (78), Expect = 0.18 Identities = 16/52 (30%), Positives = 30/52 (57%) Frame = -2 Query: 498 MKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLD 343 ++ ++++ I+D GIK + E L + E+A CLE RP M ++ +L+ Sbjct: 817 IRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 868
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does| not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 34.7 bits (78), Expect = 0.18 Identities = 16/52 (30%), Positives = 30/52 (57%) Frame = -2 Query: 498 MKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLD 343 ++ ++++ I+D GIK + E L + E+A CLE RP M ++ +L+ Sbjct: 818 IRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 869
>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)| Length = 412 Score = 34.3 bits (77), Expect = 0.23 Identities = 18/68 (26%), Positives = 36/68 (52%) Frame = -2 Query: 537 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 358 G+ K + + +L ++D+ ++D+ +ME ++A LA CL + RP+M EV Sbjct: 288 GEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEV 347 Query: 357 AEKLDRLR 334 L+ ++ Sbjct: 348 VSHLEHIQ 355
>RIMB1_RAT (Q9JIR0) Peripheral-type benzodiazepine receptor-associated protein| 1 (PRAX-1) (RIM-binding protein 1) (RIM-BP1) Length = 1847 Score = 34.3 bits (77), Expect = 0.23 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = -2 Query: 462 GIKDEDNMEILEEIAELAKHCLEMSGEN----RPSMKEVAEKLDRLRK 331 G D N+E+L + EL +HC + EN + S E EK+ RL++ Sbjct: 115 GFGDRPNLELLRALGELQQHCTILKEENQMLRKSSFPETEEKVRRLKR 162
>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)| Length = 389 Score = 33.5 bits (75), Expect = 0.40 Identities = 16/66 (24%), Positives = 36/66 (54%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 313 + RL ++D ++ + ++ +IA LA C+ + ++RP+M E+ + ++ L Sbjct: 302 KRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEELHIQKEASK 361 Query: 312 VQRNPE 295 Q+NP+ Sbjct: 362 EQQNPQ 367
>CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-dependent helicase| CHD1) Length = 1468 Score = 33.5 bits (75), Expect = 0.40 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%) Frame = -2 Query: 546 DAIGQDKSLSMMFMSAMKENRLEVILDDGIKD--------EDNMEILEEIAELAKHCLEM 391 D+IG+ + + ++ + +K L+ ILD+ I D E E +E+ E AK C+ Sbjct: 1008 DSIGESE-VRALYKAILKFGNLKEILDELIADGTLPVKSFEKYGETYDEMMEAAKDCVHE 1066 Query: 390 SGENRPSMKEVAEKLDR 340 +NR KE+ EKL++ Sbjct: 1067 EEKNR---KEILEKLEK 1080
>HIS2_METMA (Q8PUG2) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 104 Score = 33.1 bits (74), Expect = 0.52 Identities = 17/56 (30%), Positives = 33/56 (58%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVM 325 E +E IL +++ED+ EI+ E ++L H L + N +++E+A++L + M Sbjct: 48 EESIETIL--AVRNEDHREIVSESSDLIFHLLVLLAANNITLEEIADELSTRHEKM 101
>HIS2_BACC1 (P62346) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 107 Score = 32.7 bits (73), Expect = 0.68 Identities = 19/64 (29%), Positives = 35/64 (54%) Frame = -2 Query: 537 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 358 G+DK L + E EVI+ K+ DN E+++EI ++ HC + E S++++ Sbjct: 32 GEDKILKKI-----GEECTEVIIAS--KNNDNEELVKEIVDVLYHCFVLLAEKNISLEDI 84 Query: 357 AEKL 346 E++ Sbjct: 85 MEEV 88
>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)| Length = 410 Score = 32.3 bits (72), Expect = 0.89 Identities = 14/49 (28%), Positives = 30/49 (61%) Frame = -2 Query: 474 ILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKV 328 ++D+ ++D+ +ME ++A L+ CL + RP+M EV L+ ++ + Sbjct: 308 VIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSL 356
>NEK9_XENLA (Q7ZZC8) Serine/threonine-protein kinase Nek9 (EC 2.7.11.1)| (NimA-related protein kinase 9) (XNek9) (Nercc1 kinase) Length = 944 Score = 32.3 bits (72), Expect = 0.89 Identities = 20/71 (28%), Positives = 34/71 (47%) Frame = -2 Query: 447 DNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLLGEP 268 DN +E+ E+ CLE E RP+ E+ E R ++ W +R+ EE S+L Sbjct: 255 DNTVYTQELIEVVHACLEQDPEKRPTADEILE-----RPIL--SWRRRDMEEKVSMLNRS 307 Query: 267 SAMVHSTIVSD 235 + + V++ Sbjct: 308 NKKPRTGTVTE 318
>RIMB1_MOUSE (Q7TNF8) Peripheral-type benzodiazepine receptor-associated protein| 1 (PRAX-1) (Peripheral benzodiazepine receptor-interacting protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1) Length = 1846 Score = 32.3 bits (72), Expect = 0.89 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Frame = -2 Query: 462 GIKDEDNMEILEEIAELAKHCLEMSGEN----RPSMKEVAEKLDRL-RKVMHHPWVQRNP 298 G D N+E+L + EL + C + EN + S E EK+ RL RK + + Sbjct: 115 GFGDRPNLELLRALGELQQRCTILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRL 174 Query: 297 EEMESLLGEPSAMVHSTIVSDQYFSIE 217 EE L E + V S V S+E Sbjct: 175 EERAQKLQETNMRVVSAPVPRPGSSLE 201
>SYV_GLOVI (Q7NCQ9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 897 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = -2 Query: 417 ELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLLGEP 268 ELAK LE R + + +A LDR +++ HPW+ EE+ LL +P Sbjct: 669 ELAKPRLEALETRRGAQQVLAAVLDRTLRLL-HPWMPHLSEEIWQLLHQP 717
>DYHC_TRIGR (P23098) Dynein beta chain, ciliary| Length = 4466 Score = 32.0 bits (71), Expect = 1.2 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = -2 Query: 531 DKSLSMMFMSAMKENRLEVILDDGIKDEDNMEIL-EEIAELAKHCLEMSGENRPSMKEVA 355 DK + ++ + K ++ + I DD +E + I+ EE+++ AK C E + P++ Sbjct: 3085 DKLIQVVGVETEKVSKEKAIADD---EEKKVAIINEEVSKKAKDCSEDLAKAEPALLAAQ 3141 Query: 354 EKLDRLRKVMHHPWVQRNPEEMESLLGEPSAMV 256 E L+ L K N E++S PSA++ Sbjct: 3142 EALNTLNK--------NNLTELKSFGSPPSAVL 3166
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3| (EC 2.7.11.1) Length = 1309 Score = 31.6 bits (70), Expect = 1.5 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%) Frame = -2 Query: 435 ILEEIAELAKHCLEMSGENRPSMK---EVAEKLDRLRKVMH 322 I +I ELA+ CL SGEN + + E+ EKL+RL + H Sbjct: 214 IHHQIVELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAH 254
>TPM4_MOUSE (Q6IRU2) Tropomyosin alpha-4 chain (Tropomyosin-4)| Length = 247 Score = 31.2 bits (69), Expect = 2.0 Identities = 20/49 (40%), Positives = 29/49 (59%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 E ++VI + +KDE+ MEILE + AKH ++ E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEILEMQLKEAKH---ITDEADRKYEEVARKL 132
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -2 Query: 465 DGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDR 340 D + D ME + E LA C E + RP+M++V ++L R Sbjct: 1053 DELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVVKQLTR 1094
>TWINE_DROME (Q03019) Cdc25-like protein phosphatase twine (EC 3.1.3.48)| Length = 426 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Frame = -2 Query: 483 LEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRP--SMKEVAEKLDRLRKVMHHPWV 310 LEV+L +K E N+E + + CL M +P +++E ++ + K M + Sbjct: 145 LEVLLSGQLKSESNLEEMSNKKGSLRRCLSMYPSEQPEEAVQEPDQETNMPMKKMQRKTL 204 Query: 309 QRNPEEMESLLGEPSAMV 256 N E+ LG+ ++ Sbjct: 205 SMNDAEIMRALGDEPELI 222
>HIS1_THEMA (Q9X0D2) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 208 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = -2 Query: 450 EDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHH 319 E+N+EIL+EI + H + R +EV L++L++V+ H Sbjct: 157 ENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEH 200
>HIS2_METAC (P58834) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 104 Score = 31.2 bits (69), Expect = 2.0 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVM 325 E +E IL +++ED+ EI+ E ++L H L + N ++ E+A +L + M Sbjct: 48 EESIETIL--AVRNEDHKEIVSESSDLIFHLLVLLAANNVTLDEIAGELSARHEKM 101
>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein| 1 (PRAX-1) (Peripheral benzodiazepine receptor-interacting protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1) Length = 1857 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 8/79 (10%) Frame = -2 Query: 543 AIGQDKSLSMMFMSAMKENRLEVILDDGIK----DEDNMEILEEIAELAKHCLEMSGEN- 379 ++GQ S S ++ +E L + D N+E+L + EL + C + EN Sbjct: 86 SLGQQASSSGPACQRPEDEEVEAFLKAKLNMSFGDRPNLELLRALGELRQRCAILKEENQ 145 Query: 378 ---RPSMKEVAEKLDRLRK 331 + S E EK+ RL++ Sbjct: 146 MLRKSSFPETEEKVRRLKR 164
>HIS2_SYNEL (Q8DM88) Histidine biosynthesis bifunctional protein hisIE| [Includes: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH); Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)] Length = 214 Score = 30.8 bits (68), Expect = 2.6 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = -2 Query: 507 MSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRK 331 + + E EV++ KD+D I E+A+L H L +R S+++V E+L R+ Sbjct: 158 LKKLGEETAEVVM--ACKDDDPEAIASEVADLFYHTLVALAYHRVSLRQVYEQLQLRRR 214
>HIS2_BACHK (Q6HLE1) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 107 Score = 30.8 bits (68), Expect = 2.6 Identities = 18/64 (28%), Positives = 34/64 (53%) Frame = -2 Query: 537 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 358 G+DK L + E EVI+ K+ DN E+++E+ ++ HC + E +K++ Sbjct: 32 GEDKILKKI-----GEECSEVIIAS--KNNDNEELVKEMVDVLYHCFVLLAEKNIPLKDI 84 Query: 357 AEKL 346 E++ Sbjct: 85 MEEV 88
>HIS2_BACCZ (Q63DW6) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 107 Score = 30.8 bits (68), Expect = 2.6 Identities = 18/64 (28%), Positives = 34/64 (53%) Frame = -2 Query: 537 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 358 G+DK L + E EVI+ K+ DN E+++E+ ++ HC + E +K++ Sbjct: 32 GEDKILKKI-----GEECSEVIIAS--KNNDNEELVKEMVDVLYHCFVLLAEKNIPLKDI 84 Query: 357 AEKL 346 E++ Sbjct: 85 MEEV 88
>DYHC_ANTCR (P39057) Dynein beta chain, ciliary| Length = 4466 Score = 30.8 bits (68), Expect = 2.6 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = -2 Query: 531 DKSLSMMFMSAMKENRLEVILDDGIKDEDNMEIL-EEIAELAKHCLEMSGENRPSMKEVA 355 DK + ++ + K ++ + +DD +E + I+ EE+++ AK C E + P++ Sbjct: 3085 DKLIQVVGVETEKVSKEKATVDD---EEKKVAIINEEVSKKAKDCSEDLAKAEPALLAAQ 3141 Query: 354 EKLDRLRKVMHHPWVQRNPEEMESLLGEPSAMV 256 E L+ L K N E++S PSA++ Sbjct: 3142 EALNTLNK--------NNLTELKSFGSPPSAVL 3166
>STTP1_MOUSE (Q91WG4) Stat3-interacting protein (StIP1)| Length = 831 Score = 30.4 bits (67), Expect = 3.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 335 GRLCIIHGCNGTLKRWKAYLGNPRQWS 255 G + I H +G L WK NPRQW+ Sbjct: 352 GTMIIAHAFHGALHLWKQSTVNPRQWA 378
>Y3528_METJA (Q60287) Hypothetical protein MJECL28| Length = 1272 Score = 30.4 bits (67), Expect = 3.4 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = -2 Query: 456 KDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHH 319 KD+D L+E K CLE E + +KE+ E DR K ++H Sbjct: 1011 KDDDKKSNLDE--NTIKKCLEEINEYKKIVKEINENEDRKTKKIYH 1054
>TATB_VIBPA (Q87TH0) Sec-independent protein translocase protein tatB homolog| Length = 132 Score = 30.4 bits (67), Expect = 3.4 Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 2/88 (2%) Frame = -2 Query: 465 DGIKDEDNMEI-LEEIAELAKHCLEMSGEN-RPSMKEVAEKLDRLRKVMHHPWVQRNPEE 292 + +KDE + E+ ++E+ E + +M E+ P +K E+L + + ++ P+ + E Sbjct: 44 NSVKDELSHELKVQELQENLRKAEQMGMEDLSPELKSSVEELKKAAQSVNRPYADKAQSE 103 Query: 291 MESLLGEPSAMVHSTIVSDQYFSIEKKA 208 E+ EP + + + +KKA Sbjct: 104 TETAKAEPVTESAEKVEEIKVSAADKKA 131
>NU1M_DALCH (O63623) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 310 Score = 30.4 bits (67), Expect = 3.4 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = -2 Query: 132 MFVIYFSLTISTVIGLFMVTCILSWKSDYNCLVYILNLI 16 MF + F ++I + +V+CI+ + SD+N L + + LI Sbjct: 219 MFALLFISEYLSIIFICLVSCIIFFGSDFNSLFFYIKLI 257
>Y134_MYCPN (P75264) ABC transporter ATP-binding protein MG187 homolog| (E07_orf586) Length = 586 Score = 30.4 bits (67), Expect = 3.4 Identities = 21/68 (30%), Positives = 34/68 (50%) Frame = -2 Query: 525 SLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 +L + S K+ + + L DG E L +I EL K + + + KEVAEKL Sbjct: 295 NLKKQYRSYFKQLKAKYSLKDGNLTESE---LSQIEELQKRIVSLKDFINRTAKEVAEKL 351 Query: 345 DRLRKVMH 322 + + K++H Sbjct: 352 E-ITKILH 358
>MUKB_VIBCH (Q9KRC8) Chromosome partition protein mukB (Structural maintenance| of chromosome-related protein) Length = 1491 Score = 30.0 bits (66), Expect = 4.4 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Frame = -2 Query: 534 QDKSLSMMFMSAMKENRLEVILDDG----IKDEDNMEILEEIAELAKHCLEMSGENRPSM 367 Q +S+ + K++R V+LDD ++ E + +LEE+ ++C E G+ R Sbjct: 531 QQRSVRELATQYHKQHR--VVLDDAATVELERERHSALLEELETEQENCREQRGQLRHQE 588 Query: 366 KEVAEKLDRLRKVMHHPWVQRNPEEMESLLGEPSA 262 +E+ ++ R + W++ N + +E+L + A Sbjct: 589 QELQTQIARFESIA-PAWIKAN-DALETLREQSGA 621
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 30.0 bits (66), Expect = 4.4 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +3 Query: 258 PLPRVPQVSFPSLQGSVAPMDDA*PSSAYRASLQLPSLRACSHQTSPNNAL 410 PLP PQ +FP G+ AP+ + S+ + QLP + S T+P L Sbjct: 425 PLPLRPQTNFP---GAQAPLQNPYAYSSQLPTSQLPPQQNISRATAPQTPL 472
>CKI1_SCHPO (P40233) Casein kinase I homolog 1 (EC 2.7.11.1)| Length = 446 Score = 29.6 bits (65), Expect = 5.8 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = +3 Query: 210 LSSRC*NIDH*QSSSGPLPRVPQVSFPSLQGSVAPMDDA*PSSAYRASLQLPSLRACSHQ 389 L SR ++ +SS P P++ S P+LQ + + S Y P L + S Sbjct: 307 LKSRNAETENQRSSKPPAPKLESKS-PALQNHASTQNVVSKRSDYEKPFAEPHLNSASDS 365 Query: 390 TSPN-NALPAP 419 PN N+LP P Sbjct: 366 AEPNQNSLPNP 376
>TPM4_RAT (P09495) Tropomyosin alpha-4 chain (Tropomyosin-4) (TM-4)| Length = 247 Score = 29.6 bits (65), Expect = 5.8 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 E ++VI + +KDE+ MEI E + AKH E E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE---EADRKYEEVARKL 132
>TPM4_PIG (P67937) Tropomyosin alpha-4 chain (Tropomyosin-4)| Length = 247 Score = 29.6 bits (65), Expect = 5.8 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 E ++VI + +KDE+ MEI E + AKH E E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE---EADRKYEEVARKL 132
>TPM4_HUMAN (P67936) Tropomyosin alpha-4 chain (Tropomyosin-4) (TM30p1)| Length = 247 Score = 29.6 bits (65), Expect = 5.8 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 E ++VI + +KDE+ MEI E + AKH E E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE---EADRKYEEVARKL 132
>TPM4_HORSE (P02561) Tropomyosin alpha-4 chain (Tropomyosin-4) (Platelet beta| tropomyosin) Length = 247 Score = 29.6 bits (65), Expect = 5.8 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 E ++VI + +KDE+ MEI E + AKH E E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE---EADRKYEEVARKL 132
>TPM2_RAT (P58775) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.6 bits (65), Expect = 5.8 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 313 E ++VI + +KDE+ ME+ E + AKH E S +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDR---KYEEVARKLVILEGELERS- 179 Query: 312 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 208 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>TPM2_RABIT (P58776) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.6 bits (65), Expect = 5.8 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 313 E ++VI + +KDE+ ME+ E + AKH E S +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDR---KYEEVARKLVILEGELERS- 179 Query: 312 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 208 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>TPM2_MOUSE (P58774) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.6 bits (65), Expect = 5.8 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 313 E ++VI + +KDE+ ME+ E + AKH E S +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDR---KYEEVARKLVILEGELERS- 179 Query: 312 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 208 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>TPM2_HUMAN (P07951) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.6 bits (65), Expect = 5.8 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 313 E ++VI + +KDE+ ME+ E + AKH E S +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDR---KYEEVARKLVILEGELERS- 179 Query: 312 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 208 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)| Length = 821 Score = 29.6 bits (65), Expect = 5.8 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -3 Query: 335 GRLCIIHGCNGTLKRWKAYLGNPRQWS 255 G + I H +G + WK NPRQW+ Sbjct: 352 GSMIIAHAFHGAMHLWKQSTVNPRQWA 378
>SYR2_BACAN (Q81R81) Arginyl-tRNA synthetase 2 (EC 6.1.1.19) (Arginine--tRNA| ligase 2) (ArgRS 2) Length = 562 Score = 29.6 bits (65), Expect = 5.8 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Frame = -2 Query: 528 KSLSMMFMSAMKENRLEVILDDGIKDEDNM-------EILEEIAELAKHCLEMSGENRPS 370 K L ++ M+ IL DG K E+LEE ELAK +E N Sbjct: 347 KKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLKQ 406 Query: 369 MKEVAEKLDRLRKVMH 322 +EVA+++ + H Sbjct: 407 KEEVAKQVGAGAVIFH 422
>GRHL3_HUMAN (Q8TE85) Grainyhead-like protein 3 homolog (Sister of mammalian| grainyhead) (Transcription factor CP2-like 4) Length = 626 Score = 29.6 bits (65), Expect = 5.8 Identities = 21/53 (39%), Positives = 25/53 (47%) Frame = +3 Query: 258 PLPRVPQVSFPSLQGSVAPMDDA*PSSAYRASLQLPSLRACSHQTSPNNALPA 416 P+ +P V F SLQ S A PSS+ R LP R CS T LP+ Sbjct: 456 PVLFIPNVHFSSLQRSGGAAPSAGPSSSNR----LPLKRTCSPFTEEFEPLPS 504
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRL 337 E R I D I D+D+ E + + E+A CL + + RP+ +++ L+ + Sbjct: 966 EKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLENI 1017
>YE56_CAEEL (P90747) Probable cation-transporting ATPase C10C6.6 in chromosome IV| (EC 3.6.3.-) Length = 1178 Score = 29.3 bits (64), Expect = 7.6 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 4/108 (3%) Frame = -2 Query: 375 PSMKEVAE-KLDRLRKVMHHPWVQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA--V 205 P M A+ +LD L K + + + ++ + P +++I S + + + V Sbjct: 904 PPMANAAQARLDNLMKELEEEEKAQVIKLGDASIAAPFTSKYTSIASICHVIKQGRCTLV 963 Query: 204 TNLQSGR*VIAPNYFVSKQSIN-LYMFVIYFSLTISTVIGLFMVTCIL 64 T LQ + ++A N VS S++ LY+ + FS T +T+ GL + C L Sbjct: 964 TTLQMFK-ILALNALVSAYSLSALYLDGVKFSDTQATIQGLLLAACFL 1010
>TPM2_CHICK (P19352) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.3 bits (64), Expect = 7.6 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 313 E ++VI + +KDE+ ME+ E + AKH E E +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAE---EADRKYEEVARKLVVLEGELERS- 179 Query: 312 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 208 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>HIS2_NITEU (Q82WM7) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 112 Score = 29.3 bits (64), Expect = 7.6 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -2 Query: 507 MSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDR 340 + + E E I+ KD D +I+ E A+L HCL M + S +++ +L+R Sbjct: 39 LKKIAEEAAETIM--ACKDNDREQIIYETADLWFHCLIMLTRHDISPEDILRELER 92
>STTP1_HUMAN (Q6IA86) Stat3-interacting protein (StIP1) (SHINC-2)| Length = 826 Score = 29.3 bits (64), Expect = 7.6 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -3 Query: 335 GRLCIIHGCNGTLKRWKAYLGNPRQWS 255 G + I H +G L WK NPR+W+ Sbjct: 353 GSMIIAHAFHGALHLWKQNTVNPREWT 379
>GUC2C_CAVPO (P70106) Heat-stable enterotoxin receptor precursor (GC-C)| (Intestinal guanylate cyclase) (EC 4.6.1.2) (STA receptor) (Guanylyl cyclase C) Length = 1076 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -2 Query: 426 EIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLL 277 E+ L K+C E E RP K++ L ++ + H Q+N M++L+ Sbjct: 722 EVFLLVKNCWEEDPEKRPDFKKIENTLAKIFGLFHD---QKNESYMDTLI 768
>GUC2C_PIG (P55204) Heat-stable enterotoxin receptor precursor (GC-C)| (Intestinal guanylate cyclase) (EC 4.6.1.2) (STA receptor) Length = 1073 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -2 Query: 426 EIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLL 277 E+ L K+C E E RP K++ L ++ + H Q+N M++L+ Sbjct: 719 EVYLLVKNCWEEDPEKRPDFKKIENTLAKIFGLFHD---QKNESYMDTLI 765
>ZO3_MOUSE (Q9QXY1) Tight junction protein ZO-3 (Zonula occludens 3 protein)| (Zona occludens 3 protein) (Tight junction protein 3) Length = 905 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = -1 Query: 460 DQGRGQHGDS*RNSGAGKALFGDVW*EQALNEGSCREAR*AEEGYASSMGATE 302 D GRG GDS +SG+G++ W E++ + R R G SS G +E Sbjct: 117 DHGRGYEGDS--SSGSGRS-----WGERSRRSRAGRRGRVGSHGRRSSGGGSE 162
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 28.9 bits (63), Expect = 9.9 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -2 Query: 495 KENRLEVILDDGIK-DEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHH 319 KE + +D I DE+ + + +AELA HC RP M L L ++ Sbjct: 815 KEASFKKAIDTTIDLDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNILSSLVELWKP 874 Query: 318 PWVQRNPEEM 289 +NPE++ Sbjct: 875 S--DQNPEDI 882
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 28.9 bits (63), Expect = 9.9 Identities = 21/86 (24%), Positives = 37/86 (43%) Frame = -2 Query: 462 GIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMES 283 G D +L E A LA G+ +M+E+ E LDR+ + + +P+E E Sbjct: 359 GFTGADLENLLNEAALLAAR----KGKEEITMEEIEEALDRITMGLERKGMTISPKEKEK 414 Query: 282 LLGEPSAMVHSTIVSDQYFSIEKKAV 205 + + +VSD + K ++ Sbjct: 415 IAIHEAGHALMGLVSDDDDKVHKISI 440
>ZHX1_HUMAN (Q9UKY1) Zinc fingers and homeoboxes protein 1| Length = 873 Score = 28.9 bits (63), Expect = 9.9 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Frame = -2 Query: 510 FMSAMKENRLEVILDDGIKDE--DNMEILEEIAELAKHC-LEMSG---ENRPSMKEVAEK 349 F M + + I + I D D + EE AE A+ + SG P MK + K Sbjct: 131 FKLTMVKRNNQTIFEQTINDLTFDGSFVKEENAEQAESTEVSSSGISISKTPIMKMMKNK 190 Query: 348 LDRLRKVMHHPWVQRNPEEMES 283 ++ R +HH V+ PEE E+ Sbjct: 191 VENKRIAVHHNSVEDVPEEKEN 212
>TPM_HAELO (Q8IT89) Tropomyosin| Length = 284 Score = 28.9 bits (63), Expect = 9.9 Identities = 14/57 (24%), Positives = 34/57 (59%) Frame = -2 Query: 441 MEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLLGE 271 +++LEE E ++ L+++ + + A++ +R+RK++ H + + E M+ L G+ Sbjct: 92 IQLLEEDLERSEERLKIATQKLEEASQAADESERMRKMLEHRSI-TDEERMDGLEGQ 147
>TPM_BOOMI (O97162) Tropomyosin| Length = 284 Score = 28.9 bits (63), Expect = 9.9 Identities = 14/57 (24%), Positives = 34/57 (59%) Frame = -2 Query: 441 MEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLLGE 271 +++LEE E ++ L+++ + + A++ +R+RK++ H + + E M+ L G+ Sbjct: 92 IQLLEEDLERSEERLKIATQKLEEASQAADESERMRKMLEHRSI-TDEERMDGLEGQ 147
>TPM3_MOUSE (P21107) Tropomyosin alpha-3 chain (Tropomyosin-3) (Tropomyosin| gamma) Length = 284 Score = 28.9 bits (63), Expect = 9.9 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 E ++VI + +KDE+ ME+ E + AKH E E +EVA KL Sbjct: 124 ERGMKVIENRALKDEEKMELQEIQLKEAKHIAE---EADRKYEEVARKL 169
>TPM3_HUMAN (P06753) Tropomyosin alpha-3 chain (Tropomyosin-3) (Tropomyosin| gamma) (hTM5) Length = 284 Score = 28.9 bits (63), Expect = 9.9 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 E ++VI + +KDE+ ME+ E + AKH E E +EVA KL Sbjct: 124 ERGMKVIENRALKDEEKMELQEIQLKEAKHIAE---EADRKYEEVARKL 169
>TPM1_XENLA (Q01173) Tropomyosin 1 alpha chain (Alpha-tropomyosin)| Length = 284 Score = 28.9 bits (63), Expect = 9.9 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 E ++VI + +KDE+ ME+ E + AKH E E +EVA KL Sbjct: 124 ERGMKVIENRALKDEEKMELQEIQLKEAKHIAE---EADRKYEEVARKL 169
>TPM1_BRARE (P13104) Tropomyosin 1 alpha chain (Alpha-tropomyosin)| Length = 284 Score = 28.9 bits (63), Expect = 9.9 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = -2 Query: 492 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 346 E ++VI + +KDE+ ME+ E + AKH E E +EVA KL Sbjct: 124 ERGMKVIENRALKDEEKMELQEIQLKEAKHIAE---EADRKYEEVARKL 169
>GCH1_SULSO (Q980E8) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 208 Score = 28.9 bits (63), Expect = 9.9 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%) Frame = -2 Query: 447 DNMEILEEIAELAKHCLEMSGEN--RPSMKEVAEKL 346 D+ +++EEIA + LE+ GEN R +KE E++ Sbjct: 7 DDQKLVEEIARRIREILELLGENPEREGLKETPERV 42
>GUC2C_HUMAN (P25092) Heat-stable enterotoxin receptor precursor (GC-C)| (Intestinal guanylate cyclase) (EC 4.6.1.2) (STA receptor) (hSTAR) Length = 1073 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -2 Query: 426 EIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLL 277 E+ L K+C E E RP K++ L ++ + H Q+N M++L+ Sbjct: 719 EVYLLVKNCWEEDPEKRPDFKKIETTLAKIFGLFHD---QKNESYMDTLI 765
>CATA_HALMA (O59651) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)| Length = 730 Score = 28.9 bits (63), Expect = 9.9 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Frame = -2 Query: 465 DGIKDEDNMEILEEI-------AELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQ 307 D I DE+ E+ EEI ++L K + R S K RLR W Sbjct: 438 DLIGDEEIAELKEEILDSDLSVSQLVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEV 497 Query: 306 RNPEEMESLLG 274 PE++E++LG Sbjct: 498 NEPEQLETVLG 508 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,452,834 Number of Sequences: 219361 Number of extensions: 1410506 Number of successful extensions: 4546 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 4420 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4544 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
