ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
2dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
3ref|XM_450977.1| Oryza sativa (japonica cultivar-group), mRNA 96 1e-16
4dbj|AK060211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
5ref|XM_450981.1| Oryza sativa (japonica cultivar-group), mRNA 80 9e-12
6dbj|AK071360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 9e-12
7dbj|AK111541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
8dbj|AK119296.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.030
9ref|XM_463892.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.47
10gb|AC109162.12| Mus musculus chromosome 7, clone RP24-177G14, co... 44 0.47
11gb|AC107231.9| Mus musculus chromosome 14, clone RP23-475A2, com... 44 0.47
12gb|AF512555.1| Homo sapiens excision repair cross-complementing ... 44 0.47
13gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, comp... 44 0.47
14gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, comp... 44 0.47
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
17gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, co... 44 0.47
18dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
19dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
20dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
21dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
22dbj|AK111716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
23gb|AC154195.1| Mus musculus BAC clone RP24-419F8 from 14, comple... 44 0.47
24gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 1... 44 0.47
25emb|AL513132.6| Human DNA sequence from clone RP11-460C6 on chro... 42 1.9
26gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, co... 42 1.9
27emb|AL031904.1|HS103M22 Human DNA sequence from clone RP1-103M22... 42 1.9
28gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 m... 42 1.9
29emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4,... 42 1.9
30emb|BX537351.16| Zebrafish DNA sequence from clone DKEYP-84B10 i... 42 1.9
31emb|BX005338.9| Zebrafish DNA sequence from clone DKEY-14I9 in l... 42 1.9
32gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, com... 42 1.9
33gb|AC079795.6| Homo sapiens BAC clone RP11-610P16 from 4, comple... 42 1.9
34gb|AC100795.2| Homo sapiens chromosome 18, clone RP11-956K8, com... 42 1.9
35emb|BX842688.12| Zebrafish DNA sequence from clone DKEY-202E17 i... 42 1.9
36gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p,... 42 1.9
37gb|AC090958.3| Homo sapiens chromosome 3 clone RP11-758G22 map 3... 42 1.9
38gb|AC023263.4|AC023263 Homo sapiens, clone RP11-590E14, complete... 42 1.9
39gb|AF298204.1| Dictyostelium discoideum gypsy-like LTR retrotran... 42 1.9
40dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
41gb|AC022234.4| Homo sapiens chromosome 3 clone RP11-25O17 map 3p... 42 1.9
42emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.9
43emb|AL954834.12| Zebrafish DNA sequence from clone CH211-286D20,... 42 1.9
44emb|AL671920.9| Mouse DNA sequence from clone RP23-445A22 on chr... 42 1.9
45gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 40 7.4
46gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Child... 40 7.4
47gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 40 7.4
48gb|AC150412.2| Branchiostoma floridae clone CH302-60C21, complet... 40 7.4
49gb|AF100673.1| Caenorhabditis elegans cosmid Y66H1B, complete se... 40 7.4
50gb|AC112794.4| Mus musculus chromosome 12 clone RP24-121O24, com... 40 7.4
51emb|CT009638.5| Zebrafish DNA sequence from clone CH73-162A18 in... 40 7.4
52emb|BX927195.18| Zebrafish DNA sequence from clone CH211-124E6 i... 40 7.4
53emb|BX936422.17| Zebrafish DNA sequence from clone DKEY-10I19 in... 40 7.4
54emb|CR450763.5| Zebrafish DNA sequence from clone CH211-180M24, ... 40 7.4
55emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC... 40 7.4
56emb|AL139075.2|CJ11168X2 Campylobacter jejuni subsp. jejuni NCTC... 40 7.4
57emb|AJ557546.1|MLI557546 Melittangium lichenicola melithiazol ge... 40 7.4
58emb|CR450726.6| Zebrafish DNA sequence from clone CH211-149F21 i... 40 7.4
59gb|AC103592.2| Homo sapiens chromosome 1 clone RP11-335E14, comp... 40 7.4
60emb|BX510907.15| Zebrafish DNA sequence from clone CH211-234B6 i... 40 7.4
61gb|AC145456.1| Cicer arietinum strain FLIP84-92C clone gl1-15o9,... 40 7.4
62gb|AC087600.21| Homo sapiens 12q BAC RP11-495C23 (Roswell Park C... 40 7.4
63emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 ... 40 7.4
64ref|NM_001027796.1| Caenorhabditis elegans U2AF splicing factor ... 40 7.4
65emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in... 40 7.4
66gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O... 40 7.4
67gb|AC079131.4|AC079131 Arabidopsis thaliana chromosome 1 BAC T18... 40 7.4
68gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15... 40 7.4
69gb|AC104799.4| Homo sapiens BAC clone RP11-345F13 from 2, comple... 40 7.4
70gb|AC011233.6| Homo sapiens BAC clone RP11-105F19 from 2, comple... 40 7.4
71gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 7.4
72gb|AC098932.3| Homo sapiens chromosome 1 clone RP11-480D2, compl... 40 7.4
73emb|Z29326.1|CJ16SRNA C.jejuni TGH9011(ATCC43431) gene for ribos... 40 7.4
74gb|AF074840.1|AF074840 Campylobacter coli strain JEO2777 (783) t... 40 7.4
75gb|AF074836.1|AF074836 Campylobacter jejuni strain NCTC11951 T t... 40 7.4
76gb|AF074835.1|AF074835 Campylobacter jejuni strain JEO2762 (22-5... 40 7.4
77gb|AF074833.1|AF074833 Campylobacter jejuni strain JEO2693 (1258... 40 7.4
78gb|AF074832.1|AF074832 Campylobacter jejuni strain JEO2677 (3-1 ... 40 7.4
79gb|AF074831.1|AF074831 Campylobacter jejuni strain JEO2677 (3-1 ... 40 7.4
80gb|AF074830.1|AF074830 Campylobacter jejuni strain KJ7 tRNA-Ala ... 40 7.4
81gb|AF074828.1|AF074828 Campylobacter jejuni strain NCTC11168 tRN... 40 7.4
82emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC... 40 7.4
83emb|BX927393.12| Zebrafish DNA sequence from clone CH211-231B2 i... 40 7.4
84gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome... 40 7.4
85emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chr... 40 7.4
86dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 7.4
87dbj|AB024414.1| Gallid herpesvirus 1 (serotype 2) DNA, UL region... 40 7.4
88dbj|AB049735.1| Gallid herpesvirus 3 DNA, complete genome, strai... 40 7.4
89dbj|AB024309.1| Gallid herpesvirus 1 (serotype 2) UL30 to UL40 g... 40 7.4
90dbj|AB240156.1| Octopus ocellatus mitochondrial DNA, complete ge... 40 7.4 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  145 bits (73), Expect = 2e-31
 Identities = 145/169 (85%)
 Strand = Plus / Plus

                                                                            
Query: 272      tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331
                |||||||||||||| |||||||||||||| ||  ||||  |||||||||| ||||| |||
Sbjct: 17895376 tccccaagtaagctctccatctcttcaggattttgttgtgcccatggatgttgcattacc 17895435

                                                                            
Query: 332      ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391
                ||||||| |||||||||||| |||||||||||||||||  | || || ||||||||||||
Sbjct: 17895436 ttcctcaacctatcgagcttgtctgcaacttccttcatcaacggtctattctcaccagac 17895495

                                                                 
Query: 392      atctccaaacaatgctttgccagctccgctatttcttcaagaatctcca 440
                || ||||| || |||||||| | ||| || || |||||||||| |||||
Sbjct: 17895496 atttccaagcattgctttgctaactctgcaatctcttcaagaaactcca 17895544



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 150/184 (81%)
 Strand = Plus / Plus

                                                                            
Query: 312      cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371
                |||| ||||| |||| |||||| ||||  ||||| ||||| |||||||||||||||||||
Sbjct: 17906930 cccaaggatggtgcaaaacctttctcaagctatcaagcttttctgcaacttccttcattg 17906989

                                                                            
Query: 372      agggcctgttctcaccagacatctccaaacaatgctttgccagctccgctatttcttcaa 431
                | ||||| ||||||||| |||| ||||| ||  |  | |||| ||| || || |||||||
Sbjct: 17906990 atggcctattctcaccacacatttccaagcatcgtctggccaactcagcaatctcttcaa 17907049

                                                                            
Query: 432      gaatctccatgttgtcctcgtccttgatcccatcatccaagataacctcaagcctattct 491
                |||||||||| || ||||||  ||| ||   ||||||||||||  |||||||| | ||||
Sbjct: 17907050 gaatctccatattctcctcgctcttaatttgatcatccaagatttcctcaagcttgttct 17907109

                    
Query: 492      cctt 495
                ||||
Sbjct: 17907110 cctt 17907113



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                            
Query: 312      cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371
                |||||||||| ||||||||||| |||||||| || || || |||||||  | ||||||||
Sbjct: 17948171 cccatggatgttgcataacctttctcagcctgtcaagattatctgcaatgtgcttcattg 17948230

                                            
Query: 372      agggcctgttctcaccagacatctccaa 399
                | ||||| ||| ||||||||||||||||
Sbjct: 17948231 atggcctattcacaccagacatctccaa 17948258



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 135/167 (80%)
 Strand = Plus / Plus

                                                                            
Query: 275      ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334
                ||||| ||||| ||||  |||||||| ||  |||||  |||||| || ||||| ||||| 
Sbjct: 17922166 ccaagcaagctctccaattcttcaggattttgttgcgtccatgggtgttgcattacctta 17922225

                                                                            
Query: 335      ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394
                 ||| ||||||||||||||| |||||||||||||| || || || | ||||||| |||| 
Sbjct: 17922226 atcaacctatcgagcttctccgcaacttccttcatggatggtctatcctcaccacacatt 17922285

                                                               
Query: 395      tccaaacaatgctttgccagctccgctatttcttcaagaatctccat 441
                 |||| || |||||||| |  ||||| | ||||||||||| ||||||
Sbjct: 17922286 gccaagcattgctttgctaaatccgcaacttcttcaagaaactccat 17922332



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                            
Query: 275      ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334
                ||||| ||||| |||| ||||||||| ||  |||||  |||||| || ||||| ||||| 
Sbjct: 17914076 ccaagcaagctctccaactcttcaggattttgttgcgtccatgggtgttgcattacctta 17914135

                                                                            
Query: 335      ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394
                  |||||||||||||||||| ||||||| |||||| || || || | ||||||| |||| 
Sbjct: 17914136 accagcctatcgagcttctccgcaactttcttcatggatggtctatcctcaccacacatt 17914195

                                 
Query: 395      tccaaacaatgctttgc 411
                 |||| || ||||||||
Sbjct: 17914196 gccaagcattgctttgc 17914212



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                            
Query: 332      ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391
                |||||||||||||| ||||| |||   |||||||||||||| ||||| |   |||| |||
Sbjct: 17932948 ttcctcagcctatcaagcttatctcttacttccttcattgatggcctatctacaccggac 17933007

                        
Query: 392      atctccaa 399
                ||||||||
Sbjct: 17933008 atctccaa 17933015



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                      
Query: 463      atcatccaagataacctcaagcctattctccttcatcgcagacataaacatcat 516
                ||||| ||| ||| |||| ||| | ||||||||||||||||| | |||||||||
Sbjct: 12441100 atcattcaacatatcctcgagcttgttctccttcatcgcagagagaaacatcat 12441153



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 210      ctttcttctcgatgctgaaat 230
                |||||||||||||||||||||
Sbjct: 17922101 ctttcttctcgatgctgaaat 17922121



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 210      ctttcttctcgatgctgaaat 230
                |||||||||||||||||||||
Sbjct: 17914011 ctttcttctcgatgctgaaat 17914031



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 272      tccccaagtaagctttccatctcttcagggttc 304
                |||||||| ||||| ||||||||||| ||||||
Sbjct: 12440909 tccccaagaaagctctccatctcttctgggttc 12440941
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>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1118_B06
          Length = 106678

 Score =  145 bits (73), Expect = 2e-31
 Identities = 145/169 (85%)
 Strand = Plus / Plus

                                                                         
Query: 272   tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331
             |||||||||||||| |||||||||||||| ||  ||||  |||||||||| ||||| |||
Sbjct: 46195 tccccaagtaagctctccatctcttcaggattttgttgtgcccatggatgttgcattacc 46254

                                                                         
Query: 332   ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391
             ||||||| |||||||||||| |||||||||||||||||  | || || ||||||||||||
Sbjct: 46255 ttcctcaacctatcgagcttgtctgcaacttccttcatcaacggtctattctcaccagac 46314

                                                              
Query: 392   atctccaaacaatgctttgccagctccgctatttcttcaagaatctcca 440
             || ||||| || |||||||| | ||| || || |||||||||| |||||
Sbjct: 46315 atttccaagcattgctttgctaactctgcaatctcttcaagaaactcca 46363



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 150/184 (81%)
 Strand = Plus / Plus

                                                                         
Query: 312   cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371
             |||| ||||| |||| |||||| ||||  ||||| ||||| |||||||||||||||||||
Sbjct: 57749 cccaaggatggtgcaaaacctttctcaagctatcaagcttttctgcaacttccttcattg 57808

                                                                         
Query: 372   agggcctgttctcaccagacatctccaaacaatgctttgccagctccgctatttcttcaa 431
             | ||||| ||||||||| |||| ||||| ||  |  | |||| ||| || || |||||||
Sbjct: 57809 atggcctattctcaccacacatttccaagcatcgtctggccaactcagcaatctcttcaa 57868

                                                                         
Query: 432   gaatctccatgttgtcctcgtccttgatcccatcatccaagataacctcaagcctattct 491
             |||||||||| || ||||||  ||| ||   ||||||||||||  |||||||| | ||||
Sbjct: 57869 gaatctccatattctcctcgctcttaatttgatcatccaagatttcctcaagcttgttct 57928

                 
Query: 492   cctt 495
             ||||
Sbjct: 57929 cctt 57932



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                         
Query: 312   cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371
             |||||||||| ||||||||||| |||||||| || || || |||||||  | ||||||||
Sbjct: 98990 cccatggatgttgcataacctttctcagcctgtcaagattatctgcaatgtgcttcattg 99049

                                         
Query: 372   agggcctgttctcaccagacatctccaa 399
             | ||||| ||| ||||||||||||||||
Sbjct: 99050 atggcctattcacaccagacatctccaa 99077



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 135/167 (80%)
 Strand = Plus / Plus

                                                                         
Query: 275   ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334
             ||||| ||||| ||||  |||||||| ||  |||||  |||||| || ||||| ||||| 
Sbjct: 72985 ccaagcaagctctccaattcttcaggattttgttgcgtccatgggtgttgcattacctta 73044

                                                                         
Query: 335   ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394
              ||| ||||||||||||||| |||||||||||||| || || || | ||||||| |||| 
Sbjct: 73045 atcaacctatcgagcttctccgcaacttccttcatggatggtctatcctcaccacacatt 73104

                                                            
Query: 395   tccaaacaatgctttgccagctccgctatttcttcaagaatctccat 441
              |||| || |||||||| |  ||||| | ||||||||||| ||||||
Sbjct: 73105 gccaagcattgctttgctaaatccgcaacttcttcaagaaactccat 73151



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                         
Query: 275   ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334
             ||||| ||||| |||| ||||||||| ||  |||||  |||||| || ||||| ||||| 
Sbjct: 64895 ccaagcaagctctccaactcttcaggattttgttgcgtccatgggtgttgcattacctta 64954

                                                                         
Query: 335   ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394
               |||||||||||||||||| ||||||| |||||| || || || | ||||||| |||| 
Sbjct: 64955 accagcctatcgagcttctccgcaactttcttcatggatggtctatcctcaccacacatt 65014

                              
Query: 395   tccaaacaatgctttgc 411
              |||| || ||||||||
Sbjct: 65015 gccaagcattgctttgc 65031



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 332   ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391
             |||||||||||||| ||||| |||   |||||||||||||| ||||| |   |||| |||
Sbjct: 83767 ttcctcagcctatcaagcttatctcttacttccttcattgatggcctatctacaccggac 83826

                     
Query: 392   atctccaa 399
             ||||||||
Sbjct: 83827 atctccaa 83834



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   ctttcttctcgatgctgaaat 230
             |||||||||||||||||||||
Sbjct: 72920 ctttcttctcgatgctgaaat 72940



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   ctttcttctcgatgctgaaat 230
             |||||||||||||||||||||
Sbjct: 64830 ctttcttctcgatgctgaaat 64850
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>ref|XM_450977.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2322

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 150/184 (81%)
 Strand = Plus / Minus

                                                                        
Query: 312  cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371
            |||| ||||| |||| |||||| ||||  ||||| ||||| |||||||||||||||||||
Sbjct: 2194 cccaaggatggtgcaaaacctttctcaagctatcaagcttttctgcaacttccttcattg 2135

                                                                        
Query: 372  agggcctgttctcaccagacatctccaaacaatgctttgccagctccgctatttcttcaa 431
            | ||||| ||||||||| |||| ||||| ||  |  | |||| ||| || || |||||||
Sbjct: 2134 atggcctattctcaccacacatttccaagcatcgtctggccaactcagcaatctcttcaa 2075

                                                                        
Query: 432  gaatctccatgttgtcctcgtccttgatcccatcatccaagataacctcaagcctattct 491
            |||||||||| || ||||||  ||| ||   ||||||||||||  |||||||| | ||||
Sbjct: 2074 gaatctccatattctcctcgctcttaatttgatcatccaagatttcctcaagcttgttct 2015

                
Query: 492  cctt 495
            ||||
Sbjct: 2014 cctt 2011
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>dbj|AK060211.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B07, full
            insert sequence
          Length = 1502

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 150/184 (81%)
 Strand = Plus / Minus

                                                                        
Query: 312  cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371
            |||| ||||| |||| |||||| ||||  ||||| ||||| |||||||||||||||||||
Sbjct: 1205 cccaaggatggtgcaaaacctttctcaagctatcaagcttttctgcaacttccttcattg 1146

                                                                        
Query: 372  agggcctgttctcaccagacatctccaaacaatgctttgccagctccgctatttcttcaa 431
            | ||||| ||||||||| |||| ||||| ||  |  | |||| ||| || || |||||||
Sbjct: 1145 atggcctattctcaccacacatttccaagcatcgtctggccaactcagcaatctcttcaa 1086

                                                                        
Query: 432  gaatctccatgttgtcctcgtccttgatcccatcatccaagataacctcaagcctattct 491
            |||||||||| || ||||||  ||| ||   ||||||||||||  |||||||| | ||||
Sbjct: 1085 gaatctccatattctcctcgctcttaatttgatcatccaagatttcctcaagcttgttct 1026

                
Query: 492  cctt 495
            ||||
Sbjct: 1025 cctt 1022
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>ref|XM_450981.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2396

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 312  cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371
            |||||||||| ||||||||||| |||||||| || || || |||||||  | ||||||||
Sbjct: 2094 cccatggatgttgcataacctttctcagcctgtcaagattatctgcaatgtgcttcattg 2035

                                        
Query: 372  agggcctgttctcaccagacatctccaa 399
            | ||||| ||| ||||||||||||||||
Sbjct: 2034 atggcctattcacaccagacatctccaa 2007
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>dbj|AK071360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090B05, full
            insert sequence
          Length = 2453

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 312  cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371
            |||||||||| ||||||||||| |||||||| || || || |||||||  | ||||||||
Sbjct: 2151 cccatggatgttgcataacctttctcagcctgtcaagattatctgcaatgtgcttcattg 2092

                                        
Query: 372  agggcctgttctcaccagacatctccaa 399
            | ||||| ||| ||||||||||||||||
Sbjct: 2091 atggcctattcacaccagacatctccaa 2064
to top
>dbj|AK111541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038H19, full
            insert sequence
          Length = 2604

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Minus

                                                                        
Query: 275  ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334
            ||||| ||||| |||| ||||||||| ||  |||||  |||||| || ||||| ||||| 
Sbjct: 2279 ccaagcaagctctccaactcttcaggattttgttgcgtccatgggtgttgcattacctta 2220

                                                                        
Query: 335  ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394
              |||||||||||||||||| ||||||| |||||| || || || | ||||||| |||| 
Sbjct: 2219 accagcctatcgagcttctccgcaactttcttcatggatggtctatcctcaccacacatt 2160

                             
Query: 395  tccaaacaatgctttgc 411
             |||| || ||||||||
Sbjct: 2159 gccaagcattgctttgc 2143



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 210  ctttcttctcgatgctgaaat 230
            |||||||||||||||||||||
Sbjct: 2344 ctttcttctcgatgctgaaat 2324
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>dbj|AK119296.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E06, full
            insert sequence
          Length = 2995

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 332  ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391
            |||||||||||||| ||||| |||   |||||||||||||| ||||| |   |||| |||
Sbjct: 2573 ttcctcagcctatcaagcttatctcttacttccttcattgatggcctatctacaccggac 2514

                    
Query: 392  atctccaa 399
            ||||||||
Sbjct: 2513 atctccaa 2506
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>ref|XM_463892.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1611

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 358  aacttccttcattgagggcctg 379
            ||||||||||||||||||||||
Sbjct: 1236 aacttccttcattgagggcctg 1215
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>gb|AC109162.12| Mus musculus chromosome 7, clone RP24-177G14, complete sequence
          Length = 176990

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 139   attgattgattgttttgagaca 160
             ||||||||||||||||||||||
Sbjct: 71967 attgattgattgttttgagaca 71946
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>gb|AC107231.9| Mus musculus chromosome 14, clone RP23-475A2, complete sequence
          Length = 216217

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 139    attgattgattgttttgagaca 160
              ||||||||||||||||||||||
Sbjct: 171668 attgattgattgttttgagaca 171689
to top
>gb|AF512555.1| Homo sapiens excision repair cross-complementing rodent repair
            deficiency, complementation group 1 (includes overlapping
            antisense sequence) (ERCC1) gene, complete cds
          Length = 17285

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 139  attgattgattgttttgagaca 160
            ||||||||||||||||||||||
Sbjct: 7443 attgattgattgttttgagaca 7464
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>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence
          Length = 139476

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 139   attgattgattgttttgagaca 160
             ||||||||||||||||||||||
Sbjct: 68552 attgattgattgttttgagaca 68573
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>gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, complete sequence
          Length = 174831

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 139   attgattgattgttttgagaca 160
             ||||||||||||||||||||||
Sbjct: 19563 attgattgattgttttgagaca 19584
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                           
Query: 272     tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331
               ||||| |||||||| |||||||| || ||||   | ||| ||||||| || ||||| |||
Sbjct: 3514213 tccccgagtaagctctccatctcctccgggtcatgctgcgcccatgggtgctgcatgacc 3514272

                         
Query: 332     ttcctcagcc 341
               ||||||||||
Sbjct: 3514273 ttcctcagcc 3514282
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 358    aacttccttcattgagggcctg 379
              ||||||||||||||||||||||
Sbjct: 954315 aacttccttcattgagggcctg 954294
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>gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, complete sequence
          Length = 38480

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 139   attgattgattgttttgagaca 160
             ||||||||||||||||||||||
Sbjct: 22437 attgattgattgttttgagaca 22458
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>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0675A05
          Length = 131972

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 272  tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331
            ||||| |||||||| |||||||| || ||||   | ||| ||||||| || ||||| |||
Sbjct: 6050 tccccgagtaagctctccatctcctccgggtcatgctgcgcccatgggtgctgcatgacc 6109

                      
Query: 332  ttcctcagcc 341
            ||||||||||
Sbjct: 6110 ttcctcagcc 6119
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>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0033B09
          Length = 143545

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                          
Query: 272    tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331
              ||||| |||||||| |||||||| || ||||   | ||| ||||||| || ||||| |||
Sbjct: 130917 tccccgagtaagctctccatctcctccgggtcatgctgcgcccatgggtgctgcatgacc 130976

                        
Query: 332    ttcctcagcc 341
              ||||||||||
Sbjct: 130977 ttcctcagcc 130986
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>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0599F09
          Length = 157415

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                    
Query: 463    atcatccaagataacctcaagcctattctccttcatcgcagacataaacatcat 516
              ||||| ||| ||| |||| ||| | ||||||||||||||||| | |||||||||
Sbjct: 106684 atcattcaacatatcctcgagcttgttctccttcatcgcagagagaaacatcat 106737



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 272    tccccaagtaagctttccatctcttcagggttc 304
              |||||||| ||||| ||||||||||| ||||||
Sbjct: 106493 tccccaagaaagctctccatctcttctgggttc 106525
to top
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1217_F02
          Length = 118822

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 358   aacttccttcattgagggcctg 379
             ||||||||||||||||||||||
Sbjct: 25734 aacttccttcattgagggcctg 25713
to top
>dbj|AK111716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022O07, full
            insert sequence
          Length = 1611

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 358  aacttccttcattgagggcctg 379
            ||||||||||||||||||||||
Sbjct: 1236 aacttccttcattgagggcctg 1215
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>gb|AC154195.1| Mus musculus BAC clone RP24-419F8 from 14, complete sequence
          Length = 159281

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 139    attgattgattgttttgagaca 160
              ||||||||||||||||||||||
Sbjct: 132184 attgattgattgttttgagaca 132163
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>gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 19q13.3 (obtained by
             automated sequence analysis)
          Length = 37314

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 139   attgattgattgttttgagaca 160
             ||||||||||||||||||||||
Sbjct: 16976 attgattgattgttttgagaca 16955
to top
>emb|AL513132.6| Human DNA sequence from clone RP11-460C6 on chromosome 9 Contains a
             malic enzyme pseudogene, complete sequence
          Length = 180296

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 12    attagattaaatttaaaatataaac 36
             ||||||| |||||||||||||||||
Sbjct: 94639 attagataaaatttaaaatataaac 94663
to top
>gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, complete sequence
          Length = 198781

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 140   ttgattgattgttttgagaca 160
             |||||||||||||||||||||
Sbjct: 81124 ttgattgattgttttgagaca 81104
to top
>emb|AL031904.1|HS103M22 Human DNA sequence from clone RP1-103M22 on chromosome 6p24 Contains a
              CpG island, complete sequence
          Length = 140709

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      tttatttacattagattaaat 23
              |||||||||||||||||||||
Sbjct: 138323 tttatttacattagattaaat 138343
to top
>gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 map X, complete sequence
          Length = 203953

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    ttgattgattgttttgagaca 160
              |||||||||||||||||||||
Sbjct: 117806 ttgattgattgttttgagaca 117786
to top
>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11,
             complete sequence
          Length = 134231

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 284   ctttccatctcttcagggttc 304
             |||||||||||||||||||||
Sbjct: 30161 ctttccatctcttcagggttc 30181
to top
>emb|BX537351.16| Zebrafish DNA sequence from clone DKEYP-84B10 in linkage group 17,
              complete sequence
          Length = 161005

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     atgcaagttaccatgaaaagt 88
              |||||||||||||||||||||
Sbjct: 116377 atgcaagttaccatgaaaagt 116357
to top
>emb|BX005338.9| Zebrafish DNA sequence from clone DKEY-14I9 in linkage group 20 Conatins
              a CpG island, complete sequence
          Length = 159482

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     attaaatttaaaatataaact 37
              |||||||||||||||||||||
Sbjct: 118737 attaaatttaaaatataaact 118757
to top
>gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, complete sequence
          Length = 163126

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    aaatttaaaatataaactaga 40
             |||||||||||||||||||||
Sbjct: 30012 aaatttaaaatataaactaga 30032
to top
>gb|AC079795.6| Homo sapiens BAC clone RP11-610P16 from 4, complete sequence
          Length = 110185

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     aaatttaaaatataaactaga 40
              |||||||||||||||||||||
Sbjct: 105434 aaatttaaaatataaactaga 105454
to top
>gb|AC100795.2| Homo sapiens chromosome 18, clone RP11-956K8, complete sequence
          Length = 193569

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 268    gggttccccaagtaagctttc 288
              |||||||||||||||||||||
Sbjct: 153243 gggttccccaagtaagctttc 153263
to top
>emb|BX842688.12| Zebrafish DNA sequence from clone DKEY-202E17 in linkage group 19,
             complete sequence
          Length = 254720

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaatttaaaatataaactaga 40
             |||||||||||||||||||||
Sbjct: 68730 aaatttaaaatataaactaga 68710
to top
>gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p, complete sequence
          Length = 198264

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   attgattgattgttttgagac 159
             |||||||||||||||||||||
Sbjct: 69071 attgattgattgttttgagac 69091
to top
>gb|AC090958.3| Homo sapiens chromosome 3 clone RP11-758G22 map 3p, complete sequence
          Length = 193333

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 139   attgattgattgttttgagac 159
             |||||||||||||||||||||
Sbjct: 23078 attgattgattgttttgagac 23058
to top
>gb|AC023263.4|AC023263 Homo sapiens, clone RP11-590E14, complete sequence
          Length = 174176

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 268 gggttccccaagtaagctttc 288
           |||||||||||||||||||||
Sbjct: 743 gggttccccaagtaagctttc 763
to top
>gb|AF298204.1| Dictyostelium discoideum gypsy-like LTR retrotransposon DGLT-A1,
           polyprotein (pol) gene, complete cds
          Length = 5054

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 7   tttacattagattaaatttaa 27
           |||||||||||||||||||||
Sbjct: 351 tttacattagattaaatttaa 371
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 284      ctttccatctcttcagggttc 304
                |||||||||||||||||||||
Sbjct: 32887312 ctttccatctcttcagggttc 32887332
to top
>gb|AC022234.4| Homo sapiens chromosome 3 clone RP11-25O17 map 3p, complete sequence
          Length = 147172

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 139   attgattgattgttttgagac 159
             |||||||||||||||||||||
Sbjct: 78131 attgattgattgttttgagac 78111
to top
>emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete
             sequence
          Length = 123337

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 284   ctttccatctcttcagggttc 304
             |||||||||||||||||||||
Sbjct: 10392 ctttccatctcttcagggttc 10412
to top
>emb|AL954834.12| Zebrafish DNA sequence from clone CH211-286D20, complete sequence
          Length = 187914

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    attaaatttaaaatataaact 37
             |||||||||||||||||||||
Sbjct: 91288 attaaatttaaaatataaact 91268
to top
>emb|AL671920.9| Mouse DNA sequence from clone RP23-445A22 on chromosome X, complete
             sequence
          Length = 166399

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 140   ttgattgattgttttgagaca 160
             |||||||||||||||||||||
Sbjct: 68963 ttgattgattgttttgagaca 68943
to top
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     tagattaaatttaaaatataaact 37
              |||||||||| |||||||||||||
Sbjct: 776999 tagattaaatataaaatataaact 777022



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     tagattaaatttaaaatataaact 37
              |||||||||| |||||||||||||
Sbjct: 434040 tagattaaatataaaatataaact 434063



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    tagattaaatttaaaatataaact 37
             |||||||||| |||||||||||||
Sbjct: 39225 tagattaaatataaaatataaact 39248
to top
>gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 156223

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   attgttttgagacaaaataa 166
             ||||||||||||||||||||
Sbjct: 38027 attgttttgagacaaaataa 38008
to top
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     tttatttacattagattaaattta 26
             ||||| ||||||||||||||||||
Sbjct: 14899 tttatctacattagattaaattta 14922
to top
>gb|AC150412.2| Branchiostoma floridae clone CH302-60C21, complete sequence
          Length = 169780

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   aatgagaaatagataacaaa 129
             ||||||||||||||||||||
Sbjct: 51985 aatgagaaatagataacaaa 52004
to top
>gb|AF100673.1| Caenorhabditis elegans cosmid Y66H1B, complete sequence
          Length = 34122

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   aaattgattgattgttttga 156
             ||||||||||||||||||||
Sbjct: 21994 aaattgattgattgttttga 22013
to top
>gb|AC112794.4| Mus musculus chromosome 12 clone RP24-121O24, complete sequence
          Length = 171520

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   ctttccatctcttcagggtt 303
             ||||||||||||||||||||
Sbjct: 45099 ctttccatctcttcagggtt 45118
to top
>emb|CT009638.5| Zebrafish DNA sequence from clone CH73-162A18 in linkage group 6,
             complete sequence
          Length = 101890

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    attaaatttaaaatataaac 36
             ||||||||||||||||||||
Sbjct: 76035 attaaatttaaaatataaac 76054
to top
>emb|BX927195.18| Zebrafish DNA sequence from clone CH211-124E6 in linkage group 19,
             complete sequence
          Length = 148711

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   attgattgttttgagacaaa 162
             ||||||||||||||||||||
Sbjct: 76203 attgattgttttgagacaaa 76184
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>emb|BX936422.17| Zebrafish DNA sequence from clone DKEY-10I19 in linkage group 14,
              complete sequence
          Length = 260668

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      tttacattagattaaattta 26
              ||||||||||||||||||||
Sbjct: 199728 tttacattagattaaattta 199747
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>emb|CR450763.5| Zebrafish DNA sequence from clone CH211-180M24, complete sequence
          Length = 97685

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     tatttacattagattaaatt 24
             ||||||||||||||||||||
Sbjct: 16707 tatttacattagattaaatt 16688
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>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             3/6
          Length = 317511

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    tagattaaatttaaaatataaact 37
             |||||||||| |||||||||||||
Sbjct: 75604 tagattaaatataaaatataaact 75627
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>emb|AL139075.2|CJ11168X2 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             2/6
          Length = 308601

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    tagattaaatttaaaatataaact 37
             |||||||||| |||||||||||||
Sbjct: 81860 tagattaaatataaaatataaact 81883
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>emb|AJ557546.1|MLI557546 Melittangium lichenicola melithiazol gene cluster
          Length = 51855

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   atgttgtcctcgtccttgat 459
             ||||||||||||||||||||
Sbjct: 37561 atgttgtcctcgtccttgat 37542
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>emb|CR450726.6| Zebrafish DNA sequence from clone CH211-149F21 in linkage group 5,
             complete sequence
          Length = 93211

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     tatttacattagattaaatt 24
             ||||||||||||||||||||
Sbjct: 45984 tatttacattagattaaatt 46003
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>gb|AC103592.2| Homo sapiens chromosome 1 clone RP11-335E14, complete sequence
          Length = 197372

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   aatgagaaatagataacaaa 129
             ||||||||||||||||||||
Sbjct: 39380 aatgagaaatagataacaaa 39361
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>emb|BX510907.15| Zebrafish DNA sequence from clone CH211-234B6 in linkage group 5,
             complete sequence
          Length = 154591

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ttacattagattaaatttaa 27
             ||||||||||||||||||||
Sbjct: 75323 ttacattagattaaatttaa 75342
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>gb|AC145456.1| Cicer arietinum strain FLIP84-92C clone gl1-15o9, complete sequence
          Length = 45868

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   ttaaatttaaaatataaact 37
            ||||||||||||||||||||
Sbjct: 5361 ttaaatttaaaatataaact 5380
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>gb|AC087600.21| Homo sapiens 12q BAC RP11-495C23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 185454

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   attgttttgagacaaaataa 166
             ||||||||||||||||||||
Sbjct: 85909 attgttttgagacaaaataa 85928
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>emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 in linkage group 19,
              complete sequence
          Length = 188940

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 139    attgattgattgttttgagacaaa 162
              |||||||||||| |||||||||||
Sbjct: 171155 attgattgattgatttgagacaaa 171178
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>ref|NM_001027796.1| Caenorhabditis elegans U2AF splicing factor family member (uaf-1)
            (uaf-1) mRNA, complete cds
          Length = 1677

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 9    tacattagattaaatttaaaatat 32
            |||||| |||||||||||||||||
Sbjct: 1595 tacattggattaaatttaaaatat 1572
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>emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in linkage group 2,
             complete sequence
          Length = 184594

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 5     tatttacattagattaaatttaaaatataaac 36
             ||||||| ||| ||||||||||||||| ||||
Sbjct: 32097 tatttactttatattaaatttaaaataaaaac 32066
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>gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O12 genomic sequence, complete
             sequence
          Length = 39456

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   gataacaaacatatacaaat 140
             ||||||||||||||||||||
Sbjct: 34090 gataacaaacatatacaaat 34071
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>gb|AC079131.4|AC079131 Arabidopsis thaliana chromosome 1 BAC T18I24 genomic sequence, complete
             sequence
          Length = 85961

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   catcatccaagataacctca 481
             ||||||||||||||||||||
Sbjct: 12981 catcatccaagataacctca 13000
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>gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15M6 genomic sequence, complete
             sequence
          Length = 103637

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   catcatccaagataacctca 481
             ||||||||||||||||||||
Sbjct: 85359 catcatccaagataacctca 85378
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>gb|AC104799.4| Homo sapiens BAC clone RP11-345F13 from 2, complete sequence
          Length = 159933

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   gaaatagttaatgagaaata 120
             ||||||||||||||||||||
Sbjct: 35867 gaaatagttaatgagaaata 35886
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>gb|AC011233.6| Homo sapiens BAC clone RP11-105F19 from 2, complete sequence
          Length = 156939

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tttaaaatataaactagaca 42
             ||||||||||||||||||||
Sbjct: 90319 tttaaaatataaactagaca 90338
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 209     gctttcttctcgatgctgaaatat 232
               ||||||||||||| ||||||||||
Sbjct: 1680143 gctttcttctcgaggctgaaatat 1680166
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>gb|AC098932.3| Homo sapiens chromosome 1 clone RP11-480D2, complete sequence
          Length = 186291

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    aaatagataacaaacatatacaaa 139
              |||||||||||||||| |||||||
Sbjct: 106601 aaatagataacaaacagatacaaa 106578
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>emb|Z29326.1|CJ16SRNA C.jejuni TGH9011(ATCC43431) gene for ribosomal RNA operon
          Length = 5996

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 14   tagattaaatttaaaatataaact 37
            |||||||||| |||||||||||||
Sbjct: 2093 tagattaaatataaaatataaact 2116
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>gb|AF074840.1|AF074840 Campylobacter coli strain JEO2777 (783) tRNA-Ala and tRNA-Ile
           genes, complete sequence
          Length = 914

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  tagattaaatttaaaatataaact 37
           |||||||||| |||||||||||||
Sbjct: 263 tagattaaatataaaatataaact 286
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>gb|AF074836.1|AF074836 Campylobacter jejuni strain NCTC11951 T tRNA-Ala and tRNA-Ile
           genes, complete sequence
          Length = 778

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  tagattaaatttaaaatataaact 37
           |||||||||| |||||||||||||
Sbjct: 285 tagattaaatataaaatataaact 308
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>gb|AF074835.1|AF074835 Campylobacter jejuni strain JEO2762 (22-5 b) tRNA-Ala and tRNA-Ile
           genes, complete sequence
          Length = 750

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  tagattaaatttaaaatataaact 37
           |||||||||| |||||||||||||
Sbjct: 263 tagattaaatataaaatataaact 286
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>gb|AF074833.1|AF074833 Campylobacter jejuni strain JEO2693 (12583/87) tRNA-Ala and
           tRNA-Ile genes, complete sequence
          Length = 751

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  tagattaaatttaaaatataaact 37
           |||||||||| |||||||||||||
Sbjct: 263 tagattaaatataaaatataaact 286
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>gb|AF074832.1|AF074832 Campylobacter jejuni strain JEO2677 (3-1 a) tRNA-Ala and tRNA-Ile
           genes, complete sequence
          Length = 751

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  tagattaaatttaaaatataaact 37
           |||||||||| |||||||||||||
Sbjct: 263 tagattaaatataaaatataaact 286
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>gb|AF074831.1|AF074831 Campylobacter jejuni strain JEO2677 (3-1 a) tRNA-Ala and tRNA-Ile
           genes, complete sequence
          Length = 750

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  tagattaaatttaaaatataaact 37
           |||||||||| |||||||||||||
Sbjct: 263 tagattaaatataaaatataaact 286
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>gb|AF074830.1|AF074830 Campylobacter jejuni strain KJ7 tRNA-Ala and tRNA-Ile genes,
           complete sequence
          Length = 751

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  tagattaaatttaaaatataaact 37
           |||||||||| |||||||||||||
Sbjct: 263 tagattaaatataaaatataaact 286
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>gb|AF074828.1|AF074828 Campylobacter jejuni strain NCTC11168 tRNA-Ala and tRNA-Ile genes,
           complete sequence
          Length = 753

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  tagattaaatttaaaatataaact 37
           |||||||||| |||||||||||||
Sbjct: 263 tagattaaatataaaatataaact 286
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>emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             1/6
          Length = 314150

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    tagattaaatttaaaatataaact 37
             |||||||||| |||||||||||||
Sbjct: 41078 tagattaaatataaaatataaact 41101
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>emb|BX927393.12| Zebrafish DNA sequence from clone CH211-231B2 in linkage group 1,
             complete sequence
          Length = 152923

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     catttatttacattagatta 20
             ||||||||||||||||||||
Sbjct: 29341 catttatttacattagatta 29360
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>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence
          Length = 184821

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   tgattgattgttttgagaca 160
             ||||||||||||||||||||
Sbjct: 48462 tgattgattgttttgagaca 48443
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>emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chromosome 2, complete
             sequence
          Length = 142565

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   acatatacaaattgattgat 148
             ||||||||||||||||||||
Sbjct: 72601 acatatacaaattgattgat 72620
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>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399,
             complete sequence
          Length = 94919

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    attagattaaatttaaaatataaa 35
             |||||||||| |||||||||||||
Sbjct: 27430 attagattaattttaaaatataaa 27453
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>dbj|AB024414.1| Gallid herpesvirus 1 (serotype 2) DNA, UL region complete sequence
          Length = 110637

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   tacaaattgattgattgttt 153
             ||||||||||||||||||||
Sbjct: 59514 tacaaattgattgattgttt 59495
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>dbj|AB049735.1| Gallid herpesvirus 3 DNA, complete genome, strain:HPRS24
          Length = 164270

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   tacaaattgattgattgttt 153
             ||||||||||||||||||||
Sbjct: 71338 tacaaattgattgattgttt 71319
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>dbj|AB024309.1| Gallid herpesvirus 1 (serotype 2) UL30 to UL40 genes, complete cds
          Length = 27535

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 134  tacaaattgattgattgttt 153
            ||||||||||||||||||||
Sbjct: 5127 tacaaattgattgattgttt 5108
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>dbj|AB240156.1| Octopus ocellatus mitochondrial DNA, complete genome
          Length = 15979

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 89   ccaattacagttgaaatagttaat 112
            ||||||||||||||||| ||||||
Sbjct: 4699 ccaattacagttgaaattgttaat 4722


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,532,288
Number of Sequences: 3902068
Number of extensions: 6532288
Number of successful extensions: 159043
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 158512
Number of HSP's gapped (non-prelim): 523
length of query: 547
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 524
effective length of database: 17,143,297,704
effective search space: 8983087996896
effective search space used: 8983087996896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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