Clone Name | rbah61e02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 145 bits (73), Expect = 2e-31 Identities = 145/169 (85%) Strand = Plus / Plus Query: 272 tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331 |||||||||||||| |||||||||||||| || |||| |||||||||| ||||| ||| Sbjct: 17895376 tccccaagtaagctctccatctcttcaggattttgttgtgcccatggatgttgcattacc 17895435 Query: 332 ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391 ||||||| |||||||||||| ||||||||||||||||| | || || |||||||||||| Sbjct: 17895436 ttcctcaacctatcgagcttgtctgcaacttccttcatcaacggtctattctcaccagac 17895495 Query: 392 atctccaaacaatgctttgccagctccgctatttcttcaagaatctcca 440 || ||||| || |||||||| | ||| || || |||||||||| ||||| Sbjct: 17895496 atttccaagcattgctttgctaactctgcaatctcttcaagaaactcca 17895544 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 312 cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371 |||| ||||| |||| |||||| |||| ||||| ||||| ||||||||||||||||||| Sbjct: 17906930 cccaaggatggtgcaaaacctttctcaagctatcaagcttttctgcaacttccttcattg 17906989 Query: 372 agggcctgttctcaccagacatctccaaacaatgctttgccagctccgctatttcttcaa 431 | ||||| ||||||||| |||| ||||| || | | |||| ||| || || ||||||| Sbjct: 17906990 atggcctattctcaccacacatttccaagcatcgtctggccaactcagcaatctcttcaa 17907049 Query: 432 gaatctccatgttgtcctcgtccttgatcccatcatccaagataacctcaagcctattct 491 |||||||||| || |||||| ||| || |||||||||||| |||||||| | |||| Sbjct: 17907050 gaatctccatattctcctcgctcttaatttgatcatccaagatttcctcaagcttgttct 17907109 Query: 492 cctt 495 |||| Sbjct: 17907110 cctt 17907113 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 312 cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371 |||||||||| ||||||||||| |||||||| || || || ||||||| | |||||||| Sbjct: 17948171 cccatggatgttgcataacctttctcagcctgtcaagattatctgcaatgtgcttcattg 17948230 Query: 372 agggcctgttctcaccagacatctccaa 399 | ||||| ||| |||||||||||||||| Sbjct: 17948231 atggcctattcacaccagacatctccaa 17948258 Score = 77.8 bits (39), Expect = 3e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 275 ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334 ||||| ||||| |||| |||||||| || ||||| |||||| || ||||| ||||| Sbjct: 17922166 ccaagcaagctctccaattcttcaggattttgttgcgtccatgggtgttgcattacctta 17922225 Query: 335 ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394 ||| ||||||||||||||| |||||||||||||| || || || | ||||||| |||| Sbjct: 17922226 atcaacctatcgagcttctccgcaacttccttcatggatggtctatcctcaccacacatt 17922285 Query: 395 tccaaacaatgctttgccagctccgctatttcttcaagaatctccat 441 |||| || |||||||| | ||||| | ||||||||||| |||||| Sbjct: 17922286 gccaagcattgctttgctaaatccgcaacttcttcaagaaactccat 17922332 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 275 ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334 ||||| ||||| |||| ||||||||| || ||||| |||||| || ||||| ||||| Sbjct: 17914076 ccaagcaagctctccaactcttcaggattttgttgcgtccatgggtgttgcattacctta 17914135 Query: 335 ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394 |||||||||||||||||| ||||||| |||||| || || || | ||||||| |||| Sbjct: 17914136 accagcctatcgagcttctccgcaactttcttcatggatggtctatcctcaccacacatt 17914195 Query: 395 tccaaacaatgctttgc 411 |||| || |||||||| Sbjct: 17914196 gccaagcattgctttgc 17914212 Score = 48.1 bits (24), Expect = 0.030 Identities = 57/68 (83%) Strand = Plus / Plus Query: 332 ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391 |||||||||||||| ||||| ||| |||||||||||||| ||||| | |||| ||| Sbjct: 17932948 ttcctcagcctatcaagcttatctcttacttccttcattgatggcctatctacaccggac 17933007 Query: 392 atctccaa 399 |||||||| Sbjct: 17933008 atctccaa 17933015 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 463 atcatccaagataacctcaagcctattctccttcatcgcagacataaacatcat 516 ||||| ||| ||| |||| ||| | ||||||||||||||||| | ||||||||| Sbjct: 12441100 atcattcaacatatcctcgagcttgttctccttcatcgcagagagaaacatcat 12441153 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 ctttcttctcgatgctgaaat 230 ||||||||||||||||||||| Sbjct: 17922101 ctttcttctcgatgctgaaat 17922121 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 ctttcttctcgatgctgaaat 230 ||||||||||||||||||||| Sbjct: 17914011 ctttcttctcgatgctgaaat 17914031 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 tccccaagtaagctttccatctcttcagggttc 304 |||||||| ||||| ||||||||||| |||||| Sbjct: 12440909 tccccaagaaagctctccatctcttctgggttc 12440941
>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_B06 Length = 106678 Score = 145 bits (73), Expect = 2e-31 Identities = 145/169 (85%) Strand = Plus / Plus Query: 272 tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331 |||||||||||||| |||||||||||||| || |||| |||||||||| ||||| ||| Sbjct: 46195 tccccaagtaagctctccatctcttcaggattttgttgtgcccatggatgttgcattacc 46254 Query: 332 ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391 ||||||| |||||||||||| ||||||||||||||||| | || || |||||||||||| Sbjct: 46255 ttcctcaacctatcgagcttgtctgcaacttccttcatcaacggtctattctcaccagac 46314 Query: 392 atctccaaacaatgctttgccagctccgctatttcttcaagaatctcca 440 || ||||| || |||||||| | ||| || || |||||||||| ||||| Sbjct: 46315 atttccaagcattgctttgctaactctgcaatctcttcaagaaactcca 46363 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 312 cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371 |||| ||||| |||| |||||| |||| ||||| ||||| ||||||||||||||||||| Sbjct: 57749 cccaaggatggtgcaaaacctttctcaagctatcaagcttttctgcaacttccttcattg 57808 Query: 372 agggcctgttctcaccagacatctccaaacaatgctttgccagctccgctatttcttcaa 431 | ||||| ||||||||| |||| ||||| || | | |||| ||| || || ||||||| Sbjct: 57809 atggcctattctcaccacacatttccaagcatcgtctggccaactcagcaatctcttcaa 57868 Query: 432 gaatctccatgttgtcctcgtccttgatcccatcatccaagataacctcaagcctattct 491 |||||||||| || |||||| ||| || |||||||||||| |||||||| | |||| Sbjct: 57869 gaatctccatattctcctcgctcttaatttgatcatccaagatttcctcaagcttgttct 57928 Query: 492 cctt 495 |||| Sbjct: 57929 cctt 57932 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 312 cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371 |||||||||| ||||||||||| |||||||| || || || ||||||| | |||||||| Sbjct: 98990 cccatggatgttgcataacctttctcagcctgtcaagattatctgcaatgtgcttcattg 99049 Query: 372 agggcctgttctcaccagacatctccaa 399 | ||||| ||| |||||||||||||||| Sbjct: 99050 atggcctattcacaccagacatctccaa 99077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 275 ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334 ||||| ||||| |||| |||||||| || ||||| |||||| || ||||| ||||| Sbjct: 72985 ccaagcaagctctccaattcttcaggattttgttgcgtccatgggtgttgcattacctta 73044 Query: 335 ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394 ||| ||||||||||||||| |||||||||||||| || || || | ||||||| |||| Sbjct: 73045 atcaacctatcgagcttctccgcaacttccttcatggatggtctatcctcaccacacatt 73104 Query: 395 tccaaacaatgctttgccagctccgctatttcttcaagaatctccat 441 |||| || |||||||| | ||||| | ||||||||||| |||||| Sbjct: 73105 gccaagcattgctttgctaaatccgcaacttcttcaagaaactccat 73151 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 275 ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334 ||||| ||||| |||| ||||||||| || ||||| |||||| || ||||| ||||| Sbjct: 64895 ccaagcaagctctccaactcttcaggattttgttgcgtccatgggtgttgcattacctta 64954 Query: 335 ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394 |||||||||||||||||| ||||||| |||||| || || || | ||||||| |||| Sbjct: 64955 accagcctatcgagcttctccgcaactttcttcatggatggtctatcctcaccacacatt 65014 Query: 395 tccaaacaatgctttgc 411 |||| || |||||||| Sbjct: 65015 gccaagcattgctttgc 65031 Score = 48.1 bits (24), Expect = 0.030 Identities = 57/68 (83%) Strand = Plus / Plus Query: 332 ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391 |||||||||||||| ||||| ||| |||||||||||||| ||||| | |||| ||| Sbjct: 83767 ttcctcagcctatcaagcttatctcttacttccttcattgatggcctatctacaccggac 83826 Query: 392 atctccaa 399 |||||||| Sbjct: 83827 atctccaa 83834 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 ctttcttctcgatgctgaaat 230 ||||||||||||||||||||| Sbjct: 72920 ctttcttctcgatgctgaaat 72940 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 ctttcttctcgatgctgaaat 230 ||||||||||||||||||||| Sbjct: 64830 ctttcttctcgatgctgaaat 64850
>ref|XM_450977.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2322 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Minus Query: 312 cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371 |||| ||||| |||| |||||| |||| ||||| ||||| ||||||||||||||||||| Sbjct: 2194 cccaaggatggtgcaaaacctttctcaagctatcaagcttttctgcaacttccttcattg 2135 Query: 372 agggcctgttctcaccagacatctccaaacaatgctttgccagctccgctatttcttcaa 431 | ||||| ||||||||| |||| ||||| || | | |||| ||| || || ||||||| Sbjct: 2134 atggcctattctcaccacacatttccaagcatcgtctggccaactcagcaatctcttcaa 2075 Query: 432 gaatctccatgttgtcctcgtccttgatcccatcatccaagataacctcaagcctattct 491 |||||||||| || |||||| ||| || |||||||||||| |||||||| | |||| Sbjct: 2074 gaatctccatattctcctcgctcttaatttgatcatccaagatttcctcaagcttgttct 2015 Query: 492 cctt 495 |||| Sbjct: 2014 cctt 2011
>dbj|AK060211.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B07, full insert sequence Length = 1502 Score = 95.6 bits (48), Expect = 1e-16 Identities = 150/184 (81%) Strand = Plus / Minus Query: 312 cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371 |||| ||||| |||| |||||| |||| ||||| ||||| ||||||||||||||||||| Sbjct: 1205 cccaaggatggtgcaaaacctttctcaagctatcaagcttttctgcaacttccttcattg 1146 Query: 372 agggcctgttctcaccagacatctccaaacaatgctttgccagctccgctatttcttcaa 431 | ||||| ||||||||| |||| ||||| || | | |||| ||| || || ||||||| Sbjct: 1145 atggcctattctcaccacacatttccaagcatcgtctggccaactcagcaatctcttcaa 1086 Query: 432 gaatctccatgttgtcctcgtccttgatcccatcatccaagataacctcaagcctattct 491 |||||||||| || |||||| ||| || |||||||||||| |||||||| | |||| Sbjct: 1085 gaatctccatattctcctcgctcttaatttgatcatccaagatttcctcaagcttgttct 1026 Query: 492 cctt 495 |||| Sbjct: 1025 cctt 1022
>ref|XM_450981.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2396 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 312 cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371 |||||||||| ||||||||||| |||||||| || || || ||||||| | |||||||| Sbjct: 2094 cccatggatgttgcataacctttctcagcctgtcaagattatctgcaatgtgcttcattg 2035 Query: 372 agggcctgttctcaccagacatctccaa 399 | ||||| ||| |||||||||||||||| Sbjct: 2034 atggcctattcacaccagacatctccaa 2007
>dbj|AK071360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090B05, full insert sequence Length = 2453 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 312 cccatggatgatgcataaccttcctcagcctatcgagcttctctgcaacttccttcattg 371 |||||||||| ||||||||||| |||||||| || || || ||||||| | |||||||| Sbjct: 2151 cccatggatgttgcataacctttctcagcctgtcaagattatctgcaatgtgcttcattg 2092 Query: 372 agggcctgttctcaccagacatctccaa 399 | ||||| ||| |||||||||||||||| Sbjct: 2091 atggcctattcacaccagacatctccaa 2064
>dbj|AK111541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038H19, full insert sequence Length = 2604 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Minus Query: 275 ccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataaccttc 334 ||||| ||||| |||| ||||||||| || ||||| |||||| || ||||| ||||| Sbjct: 2279 ccaagcaagctctccaactcttcaggattttgttgcgtccatgggtgttgcattacctta 2220 Query: 335 ctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagacatc 394 |||||||||||||||||| ||||||| |||||| || || || | ||||||| |||| Sbjct: 2219 accagcctatcgagcttctccgcaactttcttcatggatggtctatcctcaccacacatt 2160 Query: 395 tccaaacaatgctttgc 411 |||| || |||||||| Sbjct: 2159 gccaagcattgctttgc 2143 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 ctttcttctcgatgctgaaat 230 ||||||||||||||||||||| Sbjct: 2344 ctttcttctcgatgctgaaat 2324
>dbj|AK119296.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E06, full insert sequence Length = 2995 Score = 48.1 bits (24), Expect = 0.030 Identities = 57/68 (83%) Strand = Plus / Minus Query: 332 ttcctcagcctatcgagcttctctgcaacttccttcattgagggcctgttctcaccagac 391 |||||||||||||| ||||| ||| |||||||||||||| ||||| | |||| ||| Sbjct: 2573 ttcctcagcctatcaagcttatctcttacttccttcattgatggcctatctacaccggac 2514 Query: 392 atctccaa 399 |||||||| Sbjct: 2513 atctccaa 2506
>ref|XM_463892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1611 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 aacttccttcattgagggcctg 379 |||||||||||||||||||||| Sbjct: 1236 aacttccttcattgagggcctg 1215
>gb|AC109162.12| Mus musculus chromosome 7, clone RP24-177G14, complete sequence Length = 176990 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 139 attgattgattgttttgagaca 160 |||||||||||||||||||||| Sbjct: 71967 attgattgattgttttgagaca 71946
>gb|AC107231.9| Mus musculus chromosome 14, clone RP23-475A2, complete sequence Length = 216217 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 attgattgattgttttgagaca 160 |||||||||||||||||||||| Sbjct: 171668 attgattgattgttttgagaca 171689
>gb|AF512555.1| Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) (ERCC1) gene, complete cds Length = 17285 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 attgattgattgttttgagaca 160 |||||||||||||||||||||| Sbjct: 7443 attgattgattgttttgagaca 7464
>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence Length = 139476 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 attgattgattgttttgagaca 160 |||||||||||||||||||||| Sbjct: 68552 attgattgattgttttgagaca 68573
>gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, complete sequence Length = 174831 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 attgattgattgttttgagaca 160 |||||||||||||||||||||| Sbjct: 19563 attgattgattgttttgagaca 19584
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.47 Identities = 58/70 (82%) Strand = Plus / Plus Query: 272 tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331 ||||| |||||||| |||||||| || |||| | ||| ||||||| || ||||| ||| Sbjct: 3514213 tccccgagtaagctctccatctcctccgggtcatgctgcgcccatgggtgctgcatgacc 3514272 Query: 332 ttcctcagcc 341 |||||||||| Sbjct: 3514273 ttcctcagcc 3514282
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 aacttccttcattgagggcctg 379 |||||||||||||||||||||| Sbjct: 954315 aacttccttcattgagggcctg 954294
>gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, complete sequence Length = 38480 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 139 attgattgattgttttgagaca 160 |||||||||||||||||||||| Sbjct: 22437 attgattgattgttttgagaca 22458
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0675A05 Length = 131972 Score = 44.1 bits (22), Expect = 0.47 Identities = 58/70 (82%) Strand = Plus / Plus Query: 272 tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331 ||||| |||||||| |||||||| || |||| | ||| ||||||| || ||||| ||| Sbjct: 6050 tccccgagtaagctctccatctcctccgggtcatgctgcgcccatgggtgctgcatgacc 6109 Query: 332 ttcctcagcc 341 |||||||||| Sbjct: 6110 ttcctcagcc 6119
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 44.1 bits (22), Expect = 0.47 Identities = 58/70 (82%) Strand = Plus / Plus Query: 272 tccccaagtaagctttccatctcttcagggttccgttgcacccatggatgatgcataacc 331 ||||| |||||||| |||||||| || |||| | ||| ||||||| || ||||| ||| Sbjct: 130917 tccccgagtaagctctccatctcctccgggtcatgctgcgcccatgggtgctgcatgacc 130976 Query: 332 ttcctcagcc 341 |||||||||| Sbjct: 130977 ttcctcagcc 130986
>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0599F09 Length = 157415 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 463 atcatccaagataacctcaagcctattctccttcatcgcagacataaacatcat 516 ||||| ||| ||| |||| ||| | ||||||||||||||||| | ||||||||| Sbjct: 106684 atcattcaacatatcctcgagcttgttctccttcatcgcagagagaaacatcat 106737 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 272 tccccaagtaagctttccatctcttcagggttc 304 |||||||| ||||| ||||||||||| |||||| Sbjct: 106493 tccccaagaaagctctccatctcttctgggttc 106525
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 aacttccttcattgagggcctg 379 |||||||||||||||||||||| Sbjct: 25734 aacttccttcattgagggcctg 25713
>dbj|AK111716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022O07, full insert sequence Length = 1611 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 358 aacttccttcattgagggcctg 379 |||||||||||||||||||||| Sbjct: 1236 aacttccttcattgagggcctg 1215
>gb|AC154195.1| Mus musculus BAC clone RP24-419F8 from 14, complete sequence Length = 159281 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 139 attgattgattgttttgagaca 160 |||||||||||||||||||||| Sbjct: 132184 attgattgattgttttgagaca 132163
>gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 19q13.3 (obtained by automated sequence analysis) Length = 37314 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 139 attgattgattgttttgagaca 160 |||||||||||||||||||||| Sbjct: 16976 attgattgattgttttgagaca 16955
>emb|AL513132.6| Human DNA sequence from clone RP11-460C6 on chromosome 9 Contains a malic enzyme pseudogene, complete sequence Length = 180296 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 attagattaaatttaaaatataaac 36 ||||||| ||||||||||||||||| Sbjct: 94639 attagataaaatttaaaatataaac 94663
>gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, complete sequence Length = 198781 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 ttgattgattgttttgagaca 160 ||||||||||||||||||||| Sbjct: 81124 ttgattgattgttttgagaca 81104
>emb|AL031904.1|HS103M22 Human DNA sequence from clone RP1-103M22 on chromosome 6p24 Contains a CpG island, complete sequence Length = 140709 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tttatttacattagattaaat 23 ||||||||||||||||||||| Sbjct: 138323 tttatttacattagattaaat 138343
>gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 map X, complete sequence Length = 203953 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 ttgattgattgttttgagaca 160 ||||||||||||||||||||| Sbjct: 117806 ttgattgattgttttgagaca 117786
>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11, complete sequence Length = 134231 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ctttccatctcttcagggttc 304 ||||||||||||||||||||| Sbjct: 30161 ctttccatctcttcagggttc 30181
>emb|BX537351.16| Zebrafish DNA sequence from clone DKEYP-84B10 in linkage group 17, complete sequence Length = 161005 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 atgcaagttaccatgaaaagt 88 ||||||||||||||||||||| Sbjct: 116377 atgcaagttaccatgaaaagt 116357
>emb|BX005338.9| Zebrafish DNA sequence from clone DKEY-14I9 in linkage group 20 Conatins a CpG island, complete sequence Length = 159482 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 attaaatttaaaatataaact 37 ||||||||||||||||||||| Sbjct: 118737 attaaatttaaaatataaact 118757
>gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, complete sequence Length = 163126 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 aaatttaaaatataaactaga 40 ||||||||||||||||||||| Sbjct: 30012 aaatttaaaatataaactaga 30032
>gb|AC079795.6| Homo sapiens BAC clone RP11-610P16 from 4, complete sequence Length = 110185 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 aaatttaaaatataaactaga 40 ||||||||||||||||||||| Sbjct: 105434 aaatttaaaatataaactaga 105454
>gb|AC100795.2| Homo sapiens chromosome 18, clone RP11-956K8, complete sequence Length = 193569 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 gggttccccaagtaagctttc 288 ||||||||||||||||||||| Sbjct: 153243 gggttccccaagtaagctttc 153263
>emb|BX842688.12| Zebrafish DNA sequence from clone DKEY-202E17 in linkage group 19, complete sequence Length = 254720 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 aaatttaaaatataaactaga 40 ||||||||||||||||||||| Sbjct: 68730 aaatttaaaatataaactaga 68710
>gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p, complete sequence Length = 198264 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 attgattgattgttttgagac 159 ||||||||||||||||||||| Sbjct: 69071 attgattgattgttttgagac 69091
>gb|AC090958.3| Homo sapiens chromosome 3 clone RP11-758G22 map 3p, complete sequence Length = 193333 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 attgattgattgttttgagac 159 ||||||||||||||||||||| Sbjct: 23078 attgattgattgttttgagac 23058
>gb|AC023263.4|AC023263 Homo sapiens, clone RP11-590E14, complete sequence Length = 174176 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 gggttccccaagtaagctttc 288 ||||||||||||||||||||| Sbjct: 743 gggttccccaagtaagctttc 763
>gb|AF298204.1| Dictyostelium discoideum gypsy-like LTR retrotransposon DGLT-A1, polyprotein (pol) gene, complete cds Length = 5054 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tttacattagattaaatttaa 27 ||||||||||||||||||||| Sbjct: 351 tttacattagattaaatttaa 371
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ctttccatctcttcagggttc 304 ||||||||||||||||||||| Sbjct: 32887312 ctttccatctcttcagggttc 32887332
>gb|AC022234.4| Homo sapiens chromosome 3 clone RP11-25O17 map 3p, complete sequence Length = 147172 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 attgattgattgttttgagac 159 ||||||||||||||||||||| Sbjct: 78131 attgattgattgttttgagac 78111
>emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete sequence Length = 123337 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ctttccatctcttcagggttc 304 ||||||||||||||||||||| Sbjct: 10392 ctttccatctcttcagggttc 10412
>emb|AL954834.12| Zebrafish DNA sequence from clone CH211-286D20, complete sequence Length = 187914 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 attaaatttaaaatataaact 37 ||||||||||||||||||||| Sbjct: 91288 attaaatttaaaatataaact 91268
>emb|AL671920.9| Mouse DNA sequence from clone RP23-445A22 on chromosome X, complete sequence Length = 166399 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 ttgattgattgttttgagaca 160 ||||||||||||||||||||| Sbjct: 68963 ttgattgattgttttgagaca 68943
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 776999 tagattaaatataaaatataaact 777022 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 434040 tagattaaatataaaatataaact 434063 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 39225 tagattaaatataaaatataaact 39248
>gb|AC119615.7| Rattus norvegicus 10 NOVECTOR CH230-502G21 (Children's Hospital Oakland Research Institute) complete sequence Length = 156223 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 attgttttgagacaaaataa 166 |||||||||||||||||||| Sbjct: 38027 attgttttgagacaaaataa 38008
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 tttatttacattagattaaattta 26 ||||| |||||||||||||||||| Sbjct: 14899 tttatctacattagattaaattta 14922
>gb|AC150412.2| Branchiostoma floridae clone CH302-60C21, complete sequence Length = 169780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aatgagaaatagataacaaa 129 |||||||||||||||||||| Sbjct: 51985 aatgagaaatagataacaaa 52004
>gb|AF100673.1| Caenorhabditis elegans cosmid Y66H1B, complete sequence Length = 34122 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aaattgattgattgttttga 156 |||||||||||||||||||| Sbjct: 21994 aaattgattgattgttttga 22013
>gb|AC112794.4| Mus musculus chromosome 12 clone RP24-121O24, complete sequence Length = 171520 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctttccatctcttcagggtt 303 |||||||||||||||||||| Sbjct: 45099 ctttccatctcttcagggtt 45118
>emb|CT009638.5| Zebrafish DNA sequence from clone CH73-162A18 in linkage group 6, complete sequence Length = 101890 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 attaaatttaaaatataaac 36 |||||||||||||||||||| Sbjct: 76035 attaaatttaaaatataaac 76054
>emb|BX927195.18| Zebrafish DNA sequence from clone CH211-124E6 in linkage group 19, complete sequence Length = 148711 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 attgattgttttgagacaaa 162 |||||||||||||||||||| Sbjct: 76203 attgattgttttgagacaaa 76184
>emb|BX936422.17| Zebrafish DNA sequence from clone DKEY-10I19 in linkage group 14, complete sequence Length = 260668 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tttacattagattaaattta 26 |||||||||||||||||||| Sbjct: 199728 tttacattagattaaattta 199747
>emb|CR450763.5| Zebrafish DNA sequence from clone CH211-180M24, complete sequence Length = 97685 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tatttacattagattaaatt 24 |||||||||||||||||||| Sbjct: 16707 tatttacattagattaaatt 16688
>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 3/6 Length = 317511 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 75604 tagattaaatataaaatataaact 75627
>emb|AL139075.2|CJ11168X2 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 2/6 Length = 308601 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 81860 tagattaaatataaaatataaact 81883
>emb|AJ557546.1|MLI557546 Melittangium lichenicola melithiazol gene cluster Length = 51855 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 atgttgtcctcgtccttgat 459 |||||||||||||||||||| Sbjct: 37561 atgttgtcctcgtccttgat 37542
>emb|CR450726.6| Zebrafish DNA sequence from clone CH211-149F21 in linkage group 5, complete sequence Length = 93211 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tatttacattagattaaatt 24 |||||||||||||||||||| Sbjct: 45984 tatttacattagattaaatt 46003
>gb|AC103592.2| Homo sapiens chromosome 1 clone RP11-335E14, complete sequence Length = 197372 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 aatgagaaatagataacaaa 129 |||||||||||||||||||| Sbjct: 39380 aatgagaaatagataacaaa 39361
>emb|BX510907.15| Zebrafish DNA sequence from clone CH211-234B6 in linkage group 5, complete sequence Length = 154591 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ttacattagattaaatttaa 27 |||||||||||||||||||| Sbjct: 75323 ttacattagattaaatttaa 75342
>gb|AC145456.1| Cicer arietinum strain FLIP84-92C clone gl1-15o9, complete sequence Length = 45868 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ttaaatttaaaatataaact 37 |||||||||||||||||||| Sbjct: 5361 ttaaatttaaaatataaact 5380
>gb|AC087600.21| Homo sapiens 12q BAC RP11-495C23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185454 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 attgttttgagacaaaataa 166 |||||||||||||||||||| Sbjct: 85909 attgttttgagacaaaataa 85928
>emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 in linkage group 19, complete sequence Length = 188940 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 attgattgattgttttgagacaaa 162 |||||||||||| ||||||||||| Sbjct: 171155 attgattgattgatttgagacaaa 171178
>ref|NM_001027796.1| Caenorhabditis elegans U2AF splicing factor family member (uaf-1) (uaf-1) mRNA, complete cds Length = 1677 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 tacattagattaaatttaaaatat 32 |||||| ||||||||||||||||| Sbjct: 1595 tacattggattaaatttaaaatat 1572
>emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in linkage group 2, complete sequence Length = 184594 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 5 tatttacattagattaaatttaaaatataaac 36 ||||||| ||| ||||||||||||||| |||| Sbjct: 32097 tatttactttatattaaatttaaaataaaaac 32066
>gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O12 genomic sequence, complete sequence Length = 39456 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gataacaaacatatacaaat 140 |||||||||||||||||||| Sbjct: 34090 gataacaaacatatacaaat 34071
>gb|AC079131.4|AC079131 Arabidopsis thaliana chromosome 1 BAC T18I24 genomic sequence, complete sequence Length = 85961 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 catcatccaagataacctca 481 |||||||||||||||||||| Sbjct: 12981 catcatccaagataacctca 13000
>gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15M6 genomic sequence, complete sequence Length = 103637 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 catcatccaagataacctca 481 |||||||||||||||||||| Sbjct: 85359 catcatccaagataacctca 85378
>gb|AC104799.4| Homo sapiens BAC clone RP11-345F13 from 2, complete sequence Length = 159933 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gaaatagttaatgagaaata 120 |||||||||||||||||||| Sbjct: 35867 gaaatagttaatgagaaata 35886
>gb|AC011233.6| Homo sapiens BAC clone RP11-105F19 from 2, complete sequence Length = 156939 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tttaaaatataaactagaca 42 |||||||||||||||||||| Sbjct: 90319 tttaaaatataaactagaca 90338
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 gctttcttctcgatgctgaaatat 232 ||||||||||||| |||||||||| Sbjct: 1680143 gctttcttctcgaggctgaaatat 1680166
>gb|AC098932.3| Homo sapiens chromosome 1 clone RP11-480D2, complete sequence Length = 186291 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 aaatagataacaaacatatacaaa 139 |||||||||||||||| ||||||| Sbjct: 106601 aaatagataacaaacagatacaaa 106578
>emb|Z29326.1|CJ16SRNA C.jejuni TGH9011(ATCC43431) gene for ribosomal RNA operon Length = 5996 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 2093 tagattaaatataaaatataaact 2116
>gb|AF074840.1|AF074840 Campylobacter coli strain JEO2777 (783) tRNA-Ala and tRNA-Ile genes, complete sequence Length = 914 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 263 tagattaaatataaaatataaact 286
>gb|AF074836.1|AF074836 Campylobacter jejuni strain NCTC11951 T tRNA-Ala and tRNA-Ile genes, complete sequence Length = 778 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 285 tagattaaatataaaatataaact 308
>gb|AF074835.1|AF074835 Campylobacter jejuni strain JEO2762 (22-5 b) tRNA-Ala and tRNA-Ile genes, complete sequence Length = 750 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 263 tagattaaatataaaatataaact 286
>gb|AF074833.1|AF074833 Campylobacter jejuni strain JEO2693 (12583/87) tRNA-Ala and tRNA-Ile genes, complete sequence Length = 751 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 263 tagattaaatataaaatataaact 286
>gb|AF074832.1|AF074832 Campylobacter jejuni strain JEO2677 (3-1 a) tRNA-Ala and tRNA-Ile genes, complete sequence Length = 751 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 263 tagattaaatataaaatataaact 286
>gb|AF074831.1|AF074831 Campylobacter jejuni strain JEO2677 (3-1 a) tRNA-Ala and tRNA-Ile genes, complete sequence Length = 750 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 263 tagattaaatataaaatataaact 286
>gb|AF074830.1|AF074830 Campylobacter jejuni strain KJ7 tRNA-Ala and tRNA-Ile genes, complete sequence Length = 751 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 263 tagattaaatataaaatataaact 286
>gb|AF074828.1|AF074828 Campylobacter jejuni strain NCTC11168 tRNA-Ala and tRNA-Ile genes, complete sequence Length = 753 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 263 tagattaaatataaaatataaact 286
>emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 1/6 Length = 314150 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tagattaaatttaaaatataaact 37 |||||||||| ||||||||||||| Sbjct: 41078 tagattaaatataaaatataaact 41101
>emb|BX927393.12| Zebrafish DNA sequence from clone CH211-231B2 in linkage group 1, complete sequence Length = 152923 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 catttatttacattagatta 20 |||||||||||||||||||| Sbjct: 29341 catttatttacattagatta 29360
>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence Length = 184821 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tgattgattgttttgagaca 160 |||||||||||||||||||| Sbjct: 48462 tgattgattgttttgagaca 48443
>emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chromosome 2, complete sequence Length = 142565 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 acatatacaaattgattgat 148 |||||||||||||||||||| Sbjct: 72601 acatatacaaattgattgat 72620
>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399, complete sequence Length = 94919 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 attagattaaatttaaaatataaa 35 |||||||||| ||||||||||||| Sbjct: 27430 attagattaattttaaaatataaa 27453
>dbj|AB024414.1| Gallid herpesvirus 1 (serotype 2) DNA, UL region complete sequence Length = 110637 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tacaaattgattgattgttt 153 |||||||||||||||||||| Sbjct: 59514 tacaaattgattgattgttt 59495
>dbj|AB049735.1| Gallid herpesvirus 3 DNA, complete genome, strain:HPRS24 Length = 164270 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tacaaattgattgattgttt 153 |||||||||||||||||||| Sbjct: 71338 tacaaattgattgattgttt 71319
>dbj|AB024309.1| Gallid herpesvirus 1 (serotype 2) UL30 to UL40 genes, complete cds Length = 27535 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tacaaattgattgattgttt 153 |||||||||||||||||||| Sbjct: 5127 tacaaattgattgattgttt 5108
>dbj|AB240156.1| Octopus ocellatus mitochondrial DNA, complete genome Length = 15979 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 ccaattacagttgaaatagttaat 112 ||||||||||||||||| |||||| Sbjct: 4699 ccaattacagttgaaattgttaat 4722 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,532,288 Number of Sequences: 3902068 Number of extensions: 6532288 Number of successful extensions: 159043 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 158512 Number of HSP's gapped (non-prelim): 523 length of query: 547 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 524 effective length of database: 17,143,297,704 effective search space: 8983087996896 effective search space used: 8983087996896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)