Clone Information

BLAST Search Result

Clone Name	rbah61d19
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	137	6e-33
2	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	137	6e-33
3	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	135	2e-32
4	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	130	1e-30
5	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	95	4e-20
6	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	69	2e-12
7	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	62	4e-10
8	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	62	4e-10
9	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	61	7e-10
10	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	58	5e-09
11	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	58	5e-09
12	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	58	6e-09
13	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	58	6e-09
14	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	58	6e-09
15	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	57	8e-09
16	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	57	1e-08
17	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	56	2e-08
18	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	56	2e-08
19	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	56	2e-08
20	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	55	3e-08
21	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	55	3e-08
22	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	55	3e-08
23	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	54	7e-08
24	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	54	9e-08
25	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	54	9e-08
26	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	53	2e-07
27	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	52	3e-07
28	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	49	2e-06
29	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	49	3e-06
30	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	49	3e-06
31	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	49	4e-06
32	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	47	8e-06
33	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	45	5e-05
34	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	44	9e-05
35	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	44	1e-04
36	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	42	5e-04
37	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	41	6e-04
38	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	41	6e-04
39	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	41	8e-04
40	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	39	0.003
41	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	38	0.005
42	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	38	0.005
43	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	37	0.011
44	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	36	0.019
45	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	36	0.019
46	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	36	0.019
47	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	34	0.096
48	TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-...	33	0.21
49	TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-...	32	0.28
50	CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha	32	0.37
51	GLND_METCA (Q60BB2) [Protein-PII] uridylyltransferase (EC 2.7.7....	31	0.82
52	CR023_HUMAN (Q8NB54) Protein C18orf23	29	3.1
53	TSG6_HUMAN (P98066) Tumor necrosis factor-inducible protein TSG-...	29	3.1
54	DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1...	29	3.1
55	DBP4_SCHPO (Q9UTP9) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)	28	4.1
56	LTAA_AERJA (O07051) L-allo-threonine aldolase (EC 4.1.2.-) (L-al...	28	4.1
57	Y739_METCA (Q60AV5) UPF0042 protein MCA0739	28	5.3
58	DDC_DROSI (O96567) Aromatic-L-amino-acid decarboxylase (EC 4.1.1...	28	6.9
59	DDC_DROME (P05031) Aromatic-L-amino-acid decarboxylase (EC 4.1.1...	28	6.9
60	MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin...	28	6.9
61	DDC_CAVPO (P22781) Aromatic-L-amino-acid decarboxylase (EC 4.1.1...	28	6.9
62	RBP2_MOUSE (Q9ERU9) Ran-binding protein 2 (RanBP2)	27	9.0
63	MGR8_HUMAN (O00222) Metabotropic glutamate receptor 8 precursor ...	27	9.0
64	DDC_DROLE (O96571) Aromatic-L-amino-acid decarboxylase (EC 4.1.1...	27	9.0
65	DDC_RAT (P14173) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.2...	27	9.0
66	DDC_MOUSE (O88533) Aromatic-L-amino-acid decarboxylase (EC 4.1.1...	27	9.0

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  137 bits (345), Expect = 6e-33
 Identities = 69/78 (88%), Positives = 74/78 (94%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLGQQMSSQKDYSMATADIVD EVRELV+ AY RATQIINTHIDILH+LA LLIEKETVD
Sbjct: 629 FLGQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVD 688

Query: 211 GEEFMSLFIDGQAELFVA 158
           GEEFMSLFIDG+AEL+V+
Sbjct: 689 GEEFMSLFIDGKAELYVS 706

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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  137 bits (345), Expect = 6e-33
 Identities = 68/78 (87%), Positives = 74/78 (94%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           F+GQQMSSQKDYSMATADIVDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVD
Sbjct: 639 FMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVD 698

Query: 211 GEEFMSLFIDGQAELFVA 158
           GEEFMSLFIDGQAEL+++
Sbjct: 699 GEEFMSLFIDGQAELYIS 716

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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  135 bits (340), Expect = 2e-32
 Identities = 67/81 (82%), Positives = 76/81 (93%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLGQQMS+QKDYSMATAD+VDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVD
Sbjct: 630 FLGQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVD 689

Query: 211 GEEFMSLFIDGQAELFVA*VA 149
           GEEFMSLFIDG+AEL+++ V+
Sbjct: 690 GEEFMSLFIDGKAELYISWVS 710

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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  130 bits (326), Expect = 1e-30
 Identities = 66/78 (84%), Positives = 71/78 (91%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLGQ MSSQKDYSMATAD+VDAEVRELVE AY RA +II T IDILH+LA LLIEKETVD
Sbjct: 627 FLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVD 686

Query: 211 GEEFMSLFIDGQAELFVA 158
           GEEFMSLFIDGQAEL+V+
Sbjct: 687 GEEFMSLFIDGQAELYVS 704

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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 47/56 (83%), Positives = 51/56 (91%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEK 224
           FLGQQMS+QKDYSMATAD+VD+EVRELVE AY RA QII THIDILH+LA LLIEK
Sbjct: 607 FLGQQMSTQKDYSMATADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662

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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 34/75 (45%), Positives = 51/75 (68%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ ++S +D+S  TA  +D EV +LV+ AY RA Q++  +  IL +LA +L+EKETVD
Sbjct: 538 FLGRDIASDRDFSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVD 597

Query: 211 GEEFMSLFIDGQAEL 167
            EE  +L  +  A+L
Sbjct: 598 SEELQTLLANNNAKL 612

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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 31/70 (44%), Positives = 45/70 (64%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ M +Q DYS   A  +D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+ 
Sbjct: 535 FLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLH 594

Query: 211 GEEFMSLFID 182
             E  S+F D
Sbjct: 595 RPELESIFAD 604

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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 31/70 (44%), Positives = 45/70 (64%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ M +Q DYS   A  +D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+ 
Sbjct: 535 FLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLH 594

Query: 211 GEEFMSLFID 182
             E  S+F D
Sbjct: 595 RPELESIFAD 604

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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 60.8 bits (146), Expect = 7e-10
 Identities = 28/67 (41%), Positives = 44/67 (65%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG  + ++ +YS   A  +DA+VR+L E  +  A +I+    +++ RL +LLIEKET+D
Sbjct: 544 FLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETID 603

Query: 211 GEEFMSL 191
           GEEF  +
Sbjct: 604 GEEFRQI 610

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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 29/66 (43%), Positives = 43/66 (65%)
 Frame = -2

Query: 370 SQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191
           S  + S ATA+++DAEV+ ++   Y  A  I+  HID LH LAN LIE ET+ G++  +L
Sbjct: 533 SSNEISEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL 592

Query: 190 FIDGQA 173
            + G+A
Sbjct: 593 -LSGRA 597

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ ++  K  S  TA I+D EV+ L+E  YSRA  I+N +IDILH +   LI+ ET+D
Sbjct: 526 FLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETID 585

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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 57.8 bits (138), Expect = 6e-09
 Identities = 27/70 (38%), Positives = 43/70 (61%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ M S   YS   A  +D +VR +++  ++   QII  +  ++ +L +LLIEKET+D
Sbjct: 545 FLGRTMGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETID 604

Query: 211 GEEFMSLFID 182
           G+EF  +  D
Sbjct: 605 GDEFRQIVGD 614

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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 57.8 bits (138), Expect = 6e-09
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           F+G+     K YS ATA ++D EVR ++  AY RA + I TH +    +A  L++ ET+D
Sbjct: 565 FIGRDYGQTKTYSEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLD 624

Query: 211 GEEFMSLFIDGQ 176
            ++ MSLF  G+
Sbjct: 625 AKQIMSLFKTGK 636

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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 57.8 bits (138), Expect = 6e-09
 Identities = 29/68 (42%), Positives = 43/68 (63%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ M +Q DYS   A  +D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+ 
Sbjct: 535 FLGRTMGTQADYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLH 594

Query: 211 GEEFMSLF 188
             E   +F
Sbjct: 595 RPELEGIF 602

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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 57.4 bits (137), Expect = 8e-09
 Identities = 27/60 (45%), Positives = 42/60 (70%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ ++  K  S  TA I+D EV+ L+E  Y+RA +I+N ++DILH + + LI+ ET+D
Sbjct: 526 FLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETID 585

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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ M    +YS   A  +D +VRE+V   Y  A +I+  +  ++ RL +LLIEKET++
Sbjct: 545 FLGRGMGGGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIE 604

Query: 211 GEEF 200
           G EF
Sbjct: 605 GNEF 608

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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 28/61 (45%), Positives = 41/61 (67%)
 Frame = -2

Query: 355 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 176
           S ATA+++DAEV+ ++   Y  A  I+  HID LH LAN LIE ET+ G++  +L + G+
Sbjct: 538 SEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGR 596

Query: 175 A 173
           A
Sbjct: 597 A 597

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ ++  K  S  TA I+D EV+ L+E  Y+RA QI+  ++DILH + + L++ ET+D
Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETID 585

Query: 211 GEEFMSL 191
             +   L
Sbjct: 586 APQIDDL 592

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ ++  K  S  TA I+D EV+ L+E  Y+RA QI+  ++DILH + + L++ ET+D
Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETID 585

Query: 211 GEEFMSL 191
             +   L
Sbjct: 586 APQIDDL 592

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 26/67 (38%), Positives = 43/67 (64%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ ++  K  S  TA I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D
Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETID 585

Query: 211 GEEFMSL 191
             +   L
Sbjct: 586 APQIDDL 592

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 26/67 (38%), Positives = 43/67 (64%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ ++  K  S  TA I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D
Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETID 585

Query: 211 GEEFMSL 191
             +   L
Sbjct: 586 APQIDDL 592

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 26/67 (38%), Positives = 43/67 (64%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ ++  K  S  TA I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D
Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETID 585

Query: 211 GEEFMSL 191
             +   L
Sbjct: 586 APQIDDL 592

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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ ++  K  S  TA I+D EV+ LVE  Y+RA +I+  ++DILH + + LI+ ET++
Sbjct: 526 FLGRTVTKSKHMSDETARIIDEEVKLLVEKNYNRAKKILEENLDILHAMKDALIKYETIN 585

Query: 211 GEEFMSL 191
             +   L
Sbjct: 586 SRQIDDL 592

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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 26/67 (38%), Positives = 42/67 (62%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ M+  K  S  TA  +D EVR +V   Y+RA +I+  ++DILH + + L++ ET++
Sbjct: 525 FLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIE 584

Query: 211 GEEFMSL 191
            E+   L
Sbjct: 585 EEQIKQL 591

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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 26/67 (38%), Positives = 42/67 (62%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ M+  K  S  TA  +D EVR +V   Y+RA +I+  ++DILH + + L++ ET++
Sbjct: 271 FLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIE 330

Query: 211 GEEFMSL 191
            E+   L
Sbjct: 331 EEQIKQL 337

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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 25/72 (34%), Positives = 46/72 (63%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ + ++++YS A A  +D EV+ +++  Y+R  QI+  + D L  +A  L++ ET+D
Sbjct: 539 FLGRDIQNEQNYSDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLD 598

Query: 211 GEEFMSLFIDGQ 176
            E+  SL  +G+
Sbjct: 599 AEQIKSLVHEGK 610

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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 24/67 (35%), Positives = 42/67 (62%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG  M+S  +Y+   AD +D EVR+++   Y +A +I+  +  ++  +   L++KET+D
Sbjct: 559 FLGGNMASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMD 618

Query: 211 GEEFMSL 191
           G+EF  L
Sbjct: 619 GDEFREL 625

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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -2

Query: 391 FLGQQMSS-QKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETV 215
           FLGQ M + ++  S  TA  +D EV+E+VE  +++A  I+  + D+L  +A  ++EKE +
Sbjct: 549 FLGQGMGNPRRMVSDDTAKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVI 608

Query: 214 DGEEFMSLFIDGQA 173
           +GEE   L    QA
Sbjct: 609 EGEELHHLLGQVQA 622

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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 23/71 (32%), Positives = 42/71 (59%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+  +++++YS   A  +D E++ +++  Y RA QI+  + D L  +A  L++ ET+D
Sbjct: 534 FLGRDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLD 593

Query: 211 GEEFMSLFIDG 179
            E+   L   G
Sbjct: 594 AEQIKHLIDHG 604

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>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 22/67 (32%), Positives = 39/67 (58%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG+ M    + S      +DA+VR ++E  Y +  +++  +  ++ R+   L+EKET+D
Sbjct: 526 FLGRDMRLMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLD 585

Query: 211 GEEFMSL 191
           G+EF  L
Sbjct: 586 GKEFRQL 592

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>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/67 (34%), Positives = 40/67 (59%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           F G     + +YS   A  +D E++ +V  A+ RAT+II  + +++  L + LI++ET++
Sbjct: 583 FSGGDWGKRSEYSEDIAARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIE 642

Query: 211 GEEFMSL 191
           GE F  L
Sbjct: 643 GEHFRQL 649

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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 21/67 (31%), Positives = 41/67 (61%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           F+G+ +  + + S      VD EVR +++  Y +A  I++ +  ++ R+ N L+EKET++
Sbjct: 543 FIGRDLMGRHELSEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIE 602

Query: 211 GEEFMSL 191
            +EFM +
Sbjct: 603 AKEFMRI 609

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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 23/62 (37%), Positives = 36/62 (58%)
 Frame = -2

Query: 376 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 197
           M  +K YS ATA ++D EVR L+  AY R   ++      + ++A LL+EKE +D  + +
Sbjct: 683 MVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMV 742

Query: 196 SL 191
            L
Sbjct: 743 EL 744

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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 23/62 (37%), Positives = 36/62 (58%)
 Frame = -2

Query: 376 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 197
           M  +K YS ATA ++D EVR L+  AY R   ++      + ++A LL+EKE +D  + +
Sbjct: 682 MVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMV 741

Query: 196 SL 191
            L
Sbjct: 742 QL 743

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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 20/59 (33%), Positives = 37/59 (62%)
 Frame = -2

Query: 367 QKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191
           +K YS ATA ++D EVR LV +AY+R  +++    + + ++   L+EKE ++  + + L
Sbjct: 552 EKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIEL 610

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>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 17/58 (29%), Positives = 36/58 (62%)
 Frame = -2

Query: 364 KDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191
           K +S  T DI+D+EV  +V+  + R T+++    + + ++A +L++KE +  E+ + L
Sbjct: 725 KPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDL 782

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>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/71 (35%), Positives = 41/71 (57%)
 Frame = -2

Query: 388 LGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDG 209
           LG Q S QK  S  TA  +D EVR L+  A ++A +II ++ +    +A  L++ ET+D 
Sbjct: 558 LGAQ-SPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDS 616

Query: 208 EEFMSLFIDGQ 176
            +  +L+  G+
Sbjct: 617 TQIKALYETGK 627

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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/71 (35%), Positives = 41/71 (57%)
 Frame = -2

Query: 388 LGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDG 209
           LG Q S QK  S  TA  +D EVR L+  A ++A +II ++ +    +A  L++ ET+D 
Sbjct: 558 LGAQ-SPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDS 616

Query: 208 EEFMSLFIDGQ 176
            +  +L+  G+
Sbjct: 617 TQIKALYETGK 627

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 19/59 (32%), Positives = 34/59 (57%)
 Frame = -2

Query: 367 QKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191
           ++ +S     ++D E R LV  AY    +++  ++D L  LAN L+EKE ++ E+  +L
Sbjct: 688 RRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEAL 746

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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 22/68 (32%), Positives = 37/68 (54%)
 Frame = -2

Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212
           FLG  M++  D S      +D EV+ ++   Y +A  I+  + + L  +   L+EKET+ 
Sbjct: 529 FLGG-MTTAVDTSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETIT 587

Query: 211 GEEFMSLF 188
            EEF+ +F
Sbjct: 588 CEEFVEVF 595

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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = -2

Query: 364 KDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 203
           + +S    DI D EV EL++ +  RA +++      LHRLA  LIE ET+D  E
Sbjct: 649 ESWSNKIRDIADNEVIELLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAHE 702

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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 21/62 (33%), Positives = 35/62 (56%)
 Frame = -2

Query: 361 DYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 182
           D +  TA+++DAE+  +++ +Y RA  I+ T       LA  L+E ET+  +E +   I 
Sbjct: 580 DLAPQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADE-VKRVIS 638

Query: 181 GQ 176
           GQ
Sbjct: 639 GQ 640

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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -2

Query: 364 KDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 200
           ++YS  T   VD EV  ++   Y     ++    ++L  +A  L+E+ET++ +EF
Sbjct: 520 REYSECTQQYVDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERDEF 574

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>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = -2

Query: 355 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 176
           S  T   ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 652 SPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710

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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = -2

Query: 355 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 176
           S  T   ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 652 SPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710

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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = -2

Query: 355 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 176
           S  T   ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 710 SPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 768

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>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
 Frame = -2

Query: 364 KDYSMAT-----ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 203
           +DYS  T     A  +D E+R+++  +   A + I  ++++L  + + L+E ET+  EE
Sbjct: 588 RDYSKGTFGSKMAHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEE 646

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>TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein)
          Length = 275

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 30  VHFYKELYKHVCKNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 179
           V  ++E +    KN IF  S+W  QA   Y+R    G    TYA   + C
Sbjct: 9   VLLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVC 58

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>TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein) (Hyaluronate-binding
           protein PS4)
          Length = 276

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 66  KNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 179
           KN IF  S+W  QA   Y+R   +G    TYA   + C
Sbjct: 21  KNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVC 58

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>CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha|
          Length = 909

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
 Frame = -2

Query: 346 TADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAEL 167
           +AD+V   + E V  + +R T++ N  IDILH+    L+    +          D   + 
Sbjct: 208 SADVVHYPLPENVRGSRARLTELDNVEIDILHQRGAFLLPPRAL---------CDELIDA 258

Query: 166 FVA*VAPSCPVC----FRRLYEGPACRNHIDLVKMLFLQTCLYSSL*KCTXTECVD 11
           + + V P  PV     F R Y  P      +   +L LQ+ L +    C   + +D
Sbjct: 259 YFSWVHPIVPVINRTRFMRQYRDPK-----NPPSLLLLQSVLLAGTRACNNAQLMD 309

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>GLND_METCA (Q60BB2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 877

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +1

Query: 31  YIFTRNYTNMFAKTTFLLDQCGSYKLDPRITA 126
           +I+ RN   +FA+TT +LDQ G   LD +I A
Sbjct: 698 FIYERNRDFLFAQTTAVLDQLGLTVLDAKIIA 729

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>CR023_HUMAN (Q8NB54) Protein C18orf23|
          Length = 160

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -3

Query: 168 CLSHKSPRHALYVFGGYTRVQLVGTTLI**KCCFCKHVCIVPCK 37
           C +H +PR+ L +   YT  + +G  +     C C +VC+  C+
Sbjct: 33  CPAHPAPRNCLCMTVAYTGSRCLGACVC---VCVCLYVCVHVCE 73

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>TSG6_HUMAN (P98066) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein) (Hyaluronate-binding
           protein)
          Length = 277

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 66  KNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 179
           K+ IF  S+W  +A   Y+R   +G    TYA   + C
Sbjct: 21  KDGIFHNSIWLERAAGVYHREARSGKYKLTYAEAKAVC 58

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>DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 480

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +3

Query: 99  LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 266
           L+ GP  N+     H  A YA ++  CP  + L+N      SF+       L +    +M
Sbjct: 255 LEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAM 314

Query: 267 WV 272
           WV
Sbjct: 315 WV 316

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>DBP4_SCHPO (Q9UTP9) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)|
          Length = 735

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
 Frame = -2

Query: 388 LGQQMSSQKDYSMATA------DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIE 227
           L     SQKDY+ +T+        VD E ++ V T Y R  +  N  +   HR   + + 
Sbjct: 485 LKNHSQSQKDYNSSTSLDSSEESEVDVENKQNVRTKYDRIFERKNQDVLAAHRQRLVEVN 544

Query: 226 KETVDGE 206
            +  DG+
Sbjct: 545 SDEDDGD 551

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>LTAA_AERJA (O07051) L-allo-threonine aldolase (EC 4.1.2.-) (L-allo-TA)|
           (L-allo-threonine acetaldehyde-lyase)
          Length = 338

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 28/78 (35%), Positives = 38/78 (48%)
 Frame = -2

Query: 382 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 203
           Q +  Q D S+A AD+  A   + V    +R   + NTH   +  L  L   +E VD E 
Sbjct: 103 QPVPMQADGSLALADVRAAIAPDDVHFTPTRLVCLENTHNGKVLPLPYLREMRELVD-EH 161

Query: 202 FMSLFIDGQAELFVA*VA 149
            + L +DG A LF A VA
Sbjct: 162 GLQLHLDG-ARLFNAVVA 178

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>Y739_METCA (Q60AV5) UPF0042 protein MCA0739|
          Length = 295

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -2

Query: 361 DYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191
           D S+  A+ ++ E R L+E   SRA   I+T    +H+L  L+ ++  +     MSL
Sbjct: 112 DASVPLAEAIELE-RHLLEPVLSRADLHIDTTYTTIHQLRELVRQRVGIPSGGLMSL 167

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>DDC_DROSI (O96567) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 510

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 102 QAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFS 230
           + GP  N+     H  A YA ++  CP  + LM    S  SF+
Sbjct: 290 ECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFN 332

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>DDC_DROME (P05031) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 510

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 102 QAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFS 230
           + GP  N+     H  A YA ++  CP  + LM    S  SF+
Sbjct: 290 ECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFN 332

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>MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory|
           light chain-interacting protein) (MIR)
          Length = 472

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 142 CPVCFRRLYEGPACRNHIDLVKMLFLQTC 56
           C  C  +L   P CR+ ++ V+ ++L TC
Sbjct: 405 CQNCAAQLQSCPVCRSEVEHVQHVYLPTC 433

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>DDC_CAVPO (P22781) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 480

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +3

Query: 99  LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 266
           L+ GP  N+ +   H  A YA ++  CP  + L++      SF+       L +    +M
Sbjct: 255 LEVGPICNQEEMWLHIDAAYAGSAFICPEFRHLLDGVEFADSFNFNPHKWLLVNFDCSAM 314

Query: 267 WV 272
           WV
Sbjct: 315 WV 316

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>RBP2_MOUSE (Q9ERU9) Ran-binding protein 2 (RanBP2)|
          Length = 3053

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
 Frame = -2

Query: 325 EVRELVETA---YSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA* 155
           EV E ++ A   Y R+ ++  T  D++ ++A LL + +  DG      +++  A+LF   
Sbjct: 71  EVEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVTDGR--AKYWVERAAKLF--- 125

Query: 154 VAPSCPVCFR 125
             P  P  ++
Sbjct: 126 --PGSPAIYK 133

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>MGR8_HUMAN (O00222) Metabotropic glutamate receptor 8 precursor (mGluR8)|
          Length = 908

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -2

Query: 331 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 197
           + +V+ +++  YS A  + N H D+      L     T+DG+E +
Sbjct: 399 EGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKELL 443

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>DDC_DROLE (O96571) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC) (Fragment)
          Length = 403

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 102 QAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFS 230
           + GP  N+     H  A YA ++  CP  + LM    +  SF+
Sbjct: 182 ECGPVANKHNVWVHVDAAYAGSAFICPEYRHLMKGIETADSFN 224

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>DDC_RAT (P14173) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 480

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +3

Query: 99  LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 266
           L+ GP  N+     H  A YA ++  CP  + L+N      SF+       L +    +M
Sbjct: 255 LEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAM 314

Query: 267 WV 272
           WV
Sbjct: 315 WV 316

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>DDC_MOUSE (O88533) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)|
           (DOPA decarboxylase) (DDC)
          Length = 480

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +3

Query: 99  LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 266
           L+ GP  N+     H  A YA ++  CP  + L+N      SF+       L +    +M
Sbjct: 255 LEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAM 314

Query: 267 WV 272
           WV
Sbjct: 315 WV 316


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,489,524
Number of Sequences: 219361
Number of extensions: 694785
Number of successful extensions: 2196
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 2155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2196
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result