Clone Name | rbah61d19 |
---|---|
Clone Library Name | barley_pub |
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 137 bits (345), Expect = 6e-33 Identities = 69/78 (88%), Positives = 74/78 (94%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLGQQMSSQKDYSMATADIVD EVRELV+ AY RATQIINTHIDILH+LA LLIEKETVD Sbjct: 629 FLGQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVD 688 Query: 211 GEEFMSLFIDGQAELFVA 158 GEEFMSLFIDG+AEL+V+ Sbjct: 689 GEEFMSLFIDGKAELYVS 706
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 137 bits (345), Expect = 6e-33 Identities = 68/78 (87%), Positives = 74/78 (94%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 F+GQQMSSQKDYSMATADIVDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVD Sbjct: 639 FMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVD 698 Query: 211 GEEFMSLFIDGQAELFVA 158 GEEFMSLFIDGQAEL+++ Sbjct: 699 GEEFMSLFIDGQAELYIS 716
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 135 bits (340), Expect = 2e-32 Identities = 67/81 (82%), Positives = 76/81 (93%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLGQQMS+QKDYSMATAD+VDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVD Sbjct: 630 FLGQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVD 689 Query: 211 GEEFMSLFIDGQAELFVA*VA 149 GEEFMSLFIDG+AEL+++ V+ Sbjct: 690 GEEFMSLFIDGKAELYISWVS 710
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 130 bits (326), Expect = 1e-30 Identities = 66/78 (84%), Positives = 71/78 (91%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLGQ MSSQKDYSMATAD+VDAEVRELVE AY RA +II T IDILH+LA LLIEKETVD Sbjct: 627 FLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVD 686 Query: 211 GEEFMSLFIDGQAELFVA 158 GEEFMSLFIDGQAEL+V+ Sbjct: 687 GEEFMSLFIDGQAELYVS 704
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 95.1 bits (235), Expect = 4e-20 Identities = 47/56 (83%), Positives = 51/56 (91%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEK 224 FLGQQMS+QKDYSMATAD+VD+EVRELVE AY RA QII THIDILH+LA LLIEK Sbjct: 607 FLGQQMSTQKDYSMATADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 69.3 bits (168), Expect = 2e-12 Identities = 34/75 (45%), Positives = 51/75 (68%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ ++S +D+S TA +D EV +LV+ AY RA Q++ + IL +LA +L+EKETVD Sbjct: 538 FLGRDIASDRDFSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVD 597 Query: 211 GEEFMSLFIDGQAEL 167 EE +L + A+L Sbjct: 598 SEELQTLLANNNAKL 612
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 61.6 bits (148), Expect = 4e-10 Identities = 31/70 (44%), Positives = 45/70 (64%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ M +Q DYS A +D EVR+L+E A++ A +I+ + D+L LA L+EKET+ Sbjct: 535 FLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLH 594 Query: 211 GEEFMSLFID 182 E S+F D Sbjct: 595 RPELESIFAD 604
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 61.6 bits (148), Expect = 4e-10 Identities = 31/70 (44%), Positives = 45/70 (64%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ M +Q DYS A +D EVR+L+E A++ A +I+ + D+L LA L+EKET+ Sbjct: 535 FLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLH 594 Query: 211 GEEFMSLFID 182 E S+F D Sbjct: 595 RPELESIFAD 604
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 60.8 bits (146), Expect = 7e-10 Identities = 28/67 (41%), Positives = 44/67 (65%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG + ++ +YS A +DA+VR+L E + A +I+ +++ RL +LLIEKET+D Sbjct: 544 FLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETID 603 Query: 211 GEEFMSL 191 GEEF + Sbjct: 604 GEEFRQI 610
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 58.2 bits (139), Expect = 5e-09 Identities = 29/66 (43%), Positives = 43/66 (65%) Frame = -2 Query: 370 SQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191 S + S ATA+++DAEV+ ++ Y A I+ HID LH LAN LIE ET+ G++ +L Sbjct: 533 SSNEISEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL 592 Query: 190 FIDGQA 173 + G+A Sbjct: 593 -LSGRA 597
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 58.2 bits (139), Expect = 5e-09 Identities = 29/60 (48%), Positives = 40/60 (66%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ ++ K S TA I+D EV+ L+E YSRA I+N +IDILH + LI+ ET+D Sbjct: 526 FLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETID 585
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 57.8 bits (138), Expect = 6e-09 Identities = 27/70 (38%), Positives = 43/70 (61%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ M S YS A +D +VR +++ ++ QII + ++ +L +LLIEKET+D Sbjct: 545 FLGRTMGSSSQYSEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETID 604 Query: 211 GEEFMSLFID 182 G+EF + D Sbjct: 605 GDEFRQIVGD 614
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 57.8 bits (138), Expect = 6e-09 Identities = 29/72 (40%), Positives = 44/72 (61%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 F+G+ K YS ATA ++D EVR ++ AY RA + I TH + +A L++ ET+D Sbjct: 565 FIGRDYGQTKTYSEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLD 624 Query: 211 GEEFMSLFIDGQ 176 ++ MSLF G+ Sbjct: 625 AKQIMSLFKTGK 636
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 57.8 bits (138), Expect = 6e-09 Identities = 29/68 (42%), Positives = 43/68 (63%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ M +Q DYS A +D EVR+L+E A++ A +I+ + D+L LA L+EKET+ Sbjct: 535 FLGRTMGTQADYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLH 594 Query: 211 GEEFMSLF 188 E +F Sbjct: 595 RPELEGIF 602
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 57.4 bits (137), Expect = 8e-09 Identities = 27/60 (45%), Positives = 42/60 (70%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ ++ K S TA I+D EV+ L+E Y+RA +I+N ++DILH + + LI+ ET+D Sbjct: 526 FLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETID 585
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 57.0 bits (136), Expect = 1e-08 Identities = 27/64 (42%), Positives = 40/64 (62%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ M +YS A +D +VRE+V Y A +I+ + ++ RL +LLIEKET++ Sbjct: 545 FLGRGMGGGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIE 604 Query: 211 GEEF 200 G EF Sbjct: 605 GNEF 608
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/61 (45%), Positives = 41/61 (67%) Frame = -2 Query: 355 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 176 S ATA+++DAEV+ ++ Y A I+ HID LH LAN LIE ET+ G++ +L + G+ Sbjct: 538 SEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGR 596 Query: 175 A 173 A Sbjct: 597 A 597
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 56.2 bits (134), Expect = 2e-08 Identities = 27/67 (40%), Positives = 43/67 (64%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ ++ K S TA I+D EV+ L+E Y+RA QI+ ++DILH + + L++ ET+D Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETID 585 Query: 211 GEEFMSL 191 + L Sbjct: 586 APQIDDL 592
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 56.2 bits (134), Expect = 2e-08 Identities = 27/67 (40%), Positives = 43/67 (64%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ ++ K S TA I+D EV+ L+E Y+RA QI+ ++DILH + + L++ ET+D Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETID 585 Query: 211 GEEFMSL 191 + L Sbjct: 586 APQIDDL 592
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 55.5 bits (132), Expect = 3e-08 Identities = 26/67 (38%), Positives = 43/67 (64%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ ++ K S TA I+D EV+ L+E Y+RA Q++ ++DILH + + L++ ET+D Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETID 585 Query: 211 GEEFMSL 191 + L Sbjct: 586 APQIDDL 592
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 55.5 bits (132), Expect = 3e-08 Identities = 26/67 (38%), Positives = 43/67 (64%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ ++ K S TA I+D EV+ L+E Y+RA Q++ ++DILH + + L++ ET+D Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETID 585 Query: 211 GEEFMSL 191 + L Sbjct: 586 APQIDDL 592
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 55.5 bits (132), Expect = 3e-08 Identities = 26/67 (38%), Positives = 43/67 (64%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ ++ K S TA I+D EV+ L+E Y+RA Q++ ++DILH + + L++ ET+D Sbjct: 526 FLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETID 585 Query: 211 GEEFMSL 191 + L Sbjct: 586 APQIDDL 592
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 54.3 bits (129), Expect = 7e-08 Identities = 27/67 (40%), Positives = 43/67 (64%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ ++ K S TA I+D EV+ LVE Y+RA +I+ ++DILH + + LI+ ET++ Sbjct: 526 FLGRTVTKSKHMSDETARIIDEEVKLLVEKNYNRAKKILEENLDILHAMKDALIKYETIN 585 Query: 211 GEEFMSL 191 + L Sbjct: 586 SRQIDDL 592
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 53.9 bits (128), Expect = 9e-08 Identities = 26/67 (38%), Positives = 42/67 (62%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ M+ K S TA +D EVR +V Y+RA +I+ ++DILH + + L++ ET++ Sbjct: 525 FLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIE 584 Query: 211 GEEFMSL 191 E+ L Sbjct: 585 EEQIKQL 591
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 53.9 bits (128), Expect = 9e-08 Identities = 26/67 (38%), Positives = 42/67 (62%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ M+ K S TA +D EVR +V Y+RA +I+ ++DILH + + L++ ET++ Sbjct: 271 FLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIE 330 Query: 211 GEEFMSL 191 E+ L Sbjct: 331 EEQIKQL 337
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 53.1 bits (126), Expect = 2e-07 Identities = 25/72 (34%), Positives = 46/72 (63%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ + ++++YS A A +D EV+ +++ Y+R QI+ + D L +A L++ ET+D Sbjct: 539 FLGRDIQNEQNYSDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLD 598 Query: 211 GEEFMSLFIDGQ 176 E+ SL +G+ Sbjct: 599 AEQIKSLVHEGK 610
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/67 (35%), Positives = 42/67 (62%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG M+S +Y+ AD +D EVR+++ Y +A +I+ + ++ + L++KET+D Sbjct: 559 FLGGNMASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMD 618 Query: 211 GEEFMSL 191 G+EF L Sbjct: 619 GDEFREL 625
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 49.3 bits (116), Expect = 2e-06 Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%) Frame = -2 Query: 391 FLGQQMSS-QKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETV 215 FLGQ M + ++ S TA +D EV+E+VE +++A I+ + D+L +A ++EKE + Sbjct: 549 FLGQGMGNPRRMVSDDTAKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVI 608 Query: 214 DGEEFMSLFIDGQA 173 +GEE L QA Sbjct: 609 EGEELHHLLGQVQA 622
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 48.9 bits (115), Expect = 3e-06 Identities = 23/71 (32%), Positives = 42/71 (59%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ +++++YS A +D E++ +++ Y RA QI+ + D L +A L++ ET+D Sbjct: 534 FLGRDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLD 593 Query: 211 GEEFMSLFIDG 179 E+ L G Sbjct: 594 AEQIKHLIDHG 604
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 48.9 bits (115), Expect = 3e-06 Identities = 22/67 (32%), Positives = 39/67 (58%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG+ M + S +DA+VR ++E Y + +++ + ++ R+ L+EKET+D Sbjct: 526 FLGRDMRLMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLD 585 Query: 211 GEEFMSL 191 G+EF L Sbjct: 586 GKEFRQL 592
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/67 (34%), Positives = 40/67 (59%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 F G + +YS A +D E++ +V A+ RAT+II + +++ L + LI++ET++ Sbjct: 583 FSGGDWGKRSEYSEDIAARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIE 642 Query: 211 GEEFMSL 191 GE F L Sbjct: 643 GEHFRQL 649
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 47.4 bits (111), Expect = 8e-06 Identities = 21/67 (31%), Positives = 41/67 (61%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 F+G+ + + + S VD EVR +++ Y +A I++ + ++ R+ N L+EKET++ Sbjct: 543 FIGRDLMGRHELSEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIE 602 Query: 211 GEEFMSL 191 +EFM + Sbjct: 603 AKEFMRI 609
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 44.7 bits (104), Expect = 5e-05 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = -2 Query: 376 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 197 M +K YS ATA ++D EVR L+ AY R ++ + ++A LL+EKE +D + + Sbjct: 683 MVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMV 742 Query: 196 SL 191 L Sbjct: 743 EL 744
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 43.9 bits (102), Expect = 9e-05 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = -2 Query: 376 MSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 197 M +K YS ATA ++D EVR L+ AY R ++ + ++A LL+EKE +D + + Sbjct: 682 MVLEKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMV 741 Query: 196 SL 191 L Sbjct: 742 QL 743
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 43.5 bits (101), Expect = 1e-04 Identities = 20/59 (33%), Positives = 37/59 (62%) Frame = -2 Query: 367 QKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191 +K YS ATA ++D EVR LV +AY+R +++ + + ++ L+EKE ++ + + L Sbjct: 552 EKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIEL 610
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 41.6 bits (96), Expect = 5e-04 Identities = 17/58 (29%), Positives = 36/58 (62%) Frame = -2 Query: 364 KDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191 K +S T DI+D+EV +V+ + R T+++ + + ++A +L++KE + E+ + L Sbjct: 725 KPFSDETGDIIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDL 782
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/71 (35%), Positives = 41/71 (57%) Frame = -2 Query: 388 LGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDG 209 LG Q S QK S TA +D EVR L+ A ++A +II ++ + +A L++ ET+D Sbjct: 558 LGAQ-SPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDS 616 Query: 208 EEFMSLFIDGQ 176 + +L+ G+ Sbjct: 617 TQIKALYETGK 627
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/71 (35%), Positives = 41/71 (57%) Frame = -2 Query: 388 LGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDG 209 LG Q S QK S TA +D EVR L+ A ++A +II ++ + +A L++ ET+D Sbjct: 558 LGAQ-SPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDS 616 Query: 208 EEFMSLFIDGQ 176 + +L+ G+ Sbjct: 617 TQIKALYETGK 627
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 40.8 bits (94), Expect = 8e-04 Identities = 19/59 (32%), Positives = 34/59 (57%) Frame = -2 Query: 367 QKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191 ++ +S ++D E R LV AY +++ ++D L LAN L+EKE ++ E+ +L Sbjct: 688 RRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEAL 746
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 38.9 bits (89), Expect = 0.003 Identities = 22/68 (32%), Positives = 37/68 (54%) Frame = -2 Query: 391 FLGQQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 212 FLG M++ D S +D EV+ ++ Y +A I+ + + L + L+EKET+ Sbjct: 529 FLGG-MTTAVDTSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETIT 587 Query: 211 GEEFMSLF 188 EEF+ +F Sbjct: 588 CEEFVEVF 595
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/54 (40%), Positives = 31/54 (57%) Frame = -2 Query: 364 KDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 203 + +S DI D EV EL++ + RA +++ LHRLA LIE ET+D E Sbjct: 649 ESWSNKIRDIADNEVIELLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAHE 702
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 38.1 bits (87), Expect = 0.005 Identities = 21/62 (33%), Positives = 35/62 (56%) Frame = -2 Query: 361 DYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 182 D + TA+++DAE+ +++ +Y RA I+ T LA L+E ET+ +E + I Sbjct: 580 DLAPQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADE-VKRVIS 638 Query: 181 GQ 176 GQ Sbjct: 639 GQ 640
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/55 (29%), Positives = 30/55 (54%) Frame = -2 Query: 364 KDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 200 ++YS T VD EV ++ Y ++ ++L +A L+E+ET++ +EF Sbjct: 520 REYSECTQQYVDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERDEF 574
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 36.2 bits (82), Expect = 0.019 Identities = 19/60 (31%), Positives = 33/60 (55%) Frame = -2 Query: 355 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 176 S T ++ E+R L+ +Y RA I+ TH LA L+ ET+D +E + + ++G+ Sbjct: 652 SPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 36.2 bits (82), Expect = 0.019 Identities = 19/60 (31%), Positives = 33/60 (55%) Frame = -2 Query: 355 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 176 S T ++ E+R L+ +Y RA I+ TH LA L+ ET+D +E + + ++G+ Sbjct: 652 SPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 36.2 bits (82), Expect = 0.019 Identities = 19/60 (31%), Positives = 33/60 (55%) Frame = -2 Query: 355 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 176 S T ++ E+R L+ +Y RA I+ TH LA L+ ET+D +E + + ++G+ Sbjct: 710 SPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 768
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 33.9 bits (76), Expect = 0.096 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Frame = -2 Query: 364 KDYSMAT-----ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 203 +DYS T A +D E+R+++ + A + I ++++L + + L+E ET+ EE Sbjct: 588 RDYSKGTFGSKMAHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEE 646
>TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-6 precursor| (TNF-stimulated gene 6 protein) Length = 275 Score = 32.7 bits (73), Expect = 0.21 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = +3 Query: 30 VHFYKELYKHVCKNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 179 V ++E + KN IF S+W QA Y+R G TYA + C Sbjct: 9 VLLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVC 58
>TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-6 precursor| (TNF-stimulated gene 6 protein) (Hyaluronate-binding protein PS4) Length = 276 Score = 32.3 bits (72), Expect = 0.28 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +3 Query: 66 KNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 179 KN IF S+W QA Y+R +G TYA + C Sbjct: 21 KNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVC 58
>CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha| Length = 909 Score = 32.0 bits (71), Expect = 0.37 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 4/116 (3%) Frame = -2 Query: 346 TADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAEL 167 +AD+V + E V + +R T++ N IDILH+ L+ + D + Sbjct: 208 SADVVHYPLPENVRGSRARLTELDNVEIDILHQRGAFLLPPRAL---------CDELIDA 258 Query: 166 FVA*VAPSCPVC----FRRLYEGPACRNHIDLVKMLFLQTCLYSSL*KCTXTECVD 11 + + V P PV F R Y P + +L LQ+ L + C + +D Sbjct: 259 YFSWVHPIVPVINRTRFMRQYRDPK-----NPPSLLLLQSVLLAGTRACNNAQLMD 309
>GLND_METCA (Q60BB2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 877 Score = 30.8 bits (68), Expect = 0.82 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +1 Query: 31 YIFTRNYTNMFAKTTFLLDQCGSYKLDPRITA 126 +I+ RN +FA+TT +LDQ G LD +I A Sbjct: 698 FIYERNRDFLFAQTTAVLDQLGLTVLDAKIIA 729
>CR023_HUMAN (Q8NB54) Protein C18orf23| Length = 160 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = -3 Query: 168 CLSHKSPRHALYVFGGYTRVQLVGTTLI**KCCFCKHVCIVPCK 37 C +H +PR+ L + YT + +G + C C +VC+ C+ Sbjct: 33 CPAHPAPRNCLCMTVAYTGSRCLGACVC---VCVCLYVCVHVCE 73
>TSG6_HUMAN (P98066) Tumor necrosis factor-inducible protein TSG-6 precursor| (TNF-stimulated gene 6 protein) (Hyaluronate-binding protein) Length = 277 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 66 KNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 179 K+ IF S+W +A Y+R +G TYA + C Sbjct: 21 KDGIFHNSIWLERAAGVYHREARSGKYKLTYAEAKAVC 58
>DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 480 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Frame = +3 Query: 99 LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 266 L+ GP N+ H A YA ++ CP + L+N SF+ L + +M Sbjct: 255 LEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAM 314 Query: 267 WV 272 WV Sbjct: 315 WV 316
>DBP4_SCHPO (Q9UTP9) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 735 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 6/67 (8%) Frame = -2 Query: 388 LGQQMSSQKDYSMATA------DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIE 227 L SQKDY+ +T+ VD E ++ V T Y R + N + HR + + Sbjct: 485 LKNHSQSQKDYNSSTSLDSSEESEVDVENKQNVRTKYDRIFERKNQDVLAAHRQRLVEVN 544 Query: 226 KETVDGE 206 + DG+ Sbjct: 545 SDEDDGD 551
>LTAA_AERJA (O07051) L-allo-threonine aldolase (EC 4.1.2.-) (L-allo-TA)| (L-allo-threonine acetaldehyde-lyase) Length = 338 Score = 28.5 bits (62), Expect = 4.1 Identities = 28/78 (35%), Positives = 38/78 (48%) Frame = -2 Query: 382 QQMSSQKDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 203 Q + Q D S+A AD+ A + V +R + NTH + L L +E VD E Sbjct: 103 QPVPMQADGSLALADVRAAIAPDDVHFTPTRLVCLENTHNGKVLPLPYLREMRELVD-EH 161 Query: 202 FMSLFIDGQAELFVA*VA 149 + L +DG A LF A VA Sbjct: 162 GLQLHLDG-ARLFNAVVA 178
>Y739_METCA (Q60AV5) UPF0042 protein MCA0739| Length = 295 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = -2 Query: 361 DYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 191 D S+ A+ ++ E R L+E SRA I+T +H+L L+ ++ + MSL Sbjct: 112 DASVPLAEAIELE-RHLLEPVLSRADLHIDTTYTTIHQLRELVRQRVGIPSGGLMSL 167
>DDC_DROSI (O96567) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 510 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +3 Query: 102 QAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFS 230 + GP N+ H A YA ++ CP + LM S SF+ Sbjct: 290 ECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFN 332
>DDC_DROME (P05031) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 510 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +3 Query: 102 QAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFS 230 + GP N+ H A YA ++ CP + LM S SF+ Sbjct: 290 ECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFN 332
>MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 472 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -2 Query: 142 CPVCFRRLYEGPACRNHIDLVKMLFLQTC 56 C C +L P CR+ ++ V+ ++L TC Sbjct: 405 CQNCAAQLQSCPVCRSEVEHVQHVYLPTC 433
>DDC_CAVPO (P22781) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 480 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Frame = +3 Query: 99 LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 266 L+ GP N+ + H A YA ++ CP + L++ SF+ L + +M Sbjct: 255 LEVGPICNQEEMWLHIDAAYAGSAFICPEFRHLLDGVEFADSFNFNPHKWLLVNFDCSAM 314 Query: 267 WV 272 WV Sbjct: 315 WV 316
>RBP2_MOUSE (Q9ERU9) Ran-binding protein 2 (RanBP2)| Length = 3053 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Frame = -2 Query: 325 EVRELVETA---YSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAELFVA* 155 EV E ++ A Y R+ ++ T D++ ++A LL + + DG +++ A+LF Sbjct: 71 EVEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVTDGR--AKYWVERAAKLF--- 125 Query: 154 VAPSCPVCFR 125 P P ++ Sbjct: 126 --PGSPAIYK 133
>MGR8_HUMAN (O00222) Metabotropic glutamate receptor 8 precursor (mGluR8)| Length = 908 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/45 (26%), Positives = 23/45 (51%) Frame = -2 Query: 331 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFM 197 + +V+ +++ YS A + N H D+ L T+DG+E + Sbjct: 399 EGKVQFVIDAVYSMAYALHNMHKDLCPGYIGLCPRMSTIDGKELL 443
>DDC_DROLE (O96571) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) (Fragment) Length = 403 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +3 Query: 102 QAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFS 230 + GP N+ H A YA ++ CP + LM + SF+ Sbjct: 182 ECGPVANKHNVWVHVDAAYAGSAFICPEYRHLMKGIETADSFN 224
>DDC_RAT (P14173) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 480 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Frame = +3 Query: 99 LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 266 L+ GP N+ H A YA ++ CP + L+N SF+ L + +M Sbjct: 255 LEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAM 314 Query: 267 WV 272 WV Sbjct: 315 WV 316
>DDC_MOUSE (O88533) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 480 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Frame = +3 Query: 99 LQAGPSYNRRKHTGHDGATYATNSSACPSMKRLMNSSPSTVSFSIR----RLASLWRMSM 266 L+ GP N+ H A YA ++ CP + L+N SF+ L + +M Sbjct: 255 LEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAM 314 Query: 267 WV 272 WV Sbjct: 315 WV 316 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,489,524 Number of Sequences: 219361 Number of extensions: 694785 Number of successful extensions: 2196 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 2155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2196 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)