ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61d13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNJ10_ARATH (Q8GYX8) Chaperone protein dnaJ 10 (AtJ10) (AtDjC10) 61 2e-09
2YIS4_YEAST (P40564) Hypothetical 48.6 kDa protein in BET1-PAN1 i... 32 0.58
3ZN492_HUMAN (Q9P255) Zinc finger protein 492 (Fragment) 32 0.76
4ZN678_HUMAN (Q5SXM1) Zinc finger protein 678 30 2.2
5BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... 30 3.8
6NFAT5_HUMAN (O94916) Nuclear factor of activated T-cells 5 (T-ce... 29 6.4
7ZN578_HUMAN (Q96N58) Zinc finger protein 578 29 6.4
8ZF106_MOUSE (O88466) Zinc finger protein 106 (Zfp-106) (Zinc fin... 28 8.4
9ZN694_HUMAN (Q63HK3) Zinc finger protein 694 28 8.4

>DNJ10_ARATH (Q8GYX8) Chaperone protein dnaJ 10 (AtJ10) (AtDjC10)|
          Length = 398

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 35/96 (36%), Positives = 49/96 (51%)
 Frame = -1

Query: 452 EGANKEEQLMKSFEEKKEAMLNSLWKINVVDIESTLSRVCQAVLKDSTVSKDVXXXXXXX 273
           EG   EE+L +  +  K  M++SLWK+NV DIE+TL RVCQ VL+D    ++        
Sbjct: 244 EGNYTEEELEEYLQAHKRVMIDSLWKLNVADIEATLCRVCQLVLQDPEAKREELRTRARG 303

Query: 272 XXXXGTIFQGAKSLYHRENSLRVESPMEGEGTTSSH 165
               G IFQ AK+     + L    P +  G   +H
Sbjct: 304 LKALGRIFQRAKTA-SESDPLENSEPQKLNGNGKNH 338



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>YIS4_YEAST (P40564) Hypothetical 48.6 kDa protein in BET1-PAN1 intergenic|
           region
          Length = 432

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = -1

Query: 455 EEGANKEEQLMKSFEEKKEAMLNSLWKINVVDIESTLSRVCQAVLKDSTVSK 300
           EE A +E+ LM         +L++ W  +  +I STL  VC+ VL+D +VSK
Sbjct: 341 EELAQQEQLLMGK-------VLSAAWHGSKYEITSTLRGVCKKVLEDDSVSK 385



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>ZN492_HUMAN (Q9P255) Zinc finger protein 492 (Fragment)|
          Length = 574

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
 Frame = +3

Query: 51  GKHTYRCVESKPAVPQYYKQTI---IHRDPNNSQIVKCQSSVRRCRSLPFHRRFHA*AVL 221
           G+  Y+C E   A  Q    T    IH      +  +C  + ++  +L  H+R HA    
Sbjct: 348 GEKFYKCEECGKAFSQLSHLTTHKRIHSGEKPYKCEECGKAFKQSSTLTTHKRIHA---- 403

Query: 222 AMVERFCALEYRSKFFQRFS 281
              E+F   E  SK F RFS
Sbjct: 404 --GEKFYKCEVCSKAFSRFS 421



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>ZN678_HUMAN (Q5SXM1) Zinc finger protein 678|
          Length = 525

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
 Frame = +3

Query: 51  GKHTYRCVESKPAVPQYYKQTI---IHRDPNNSQIVKCQSSVRRCRSLPFHRRFH 206
           G+  Y+C E   A  Q+   T    IH      Q  +C  +  RC  L  H+R H
Sbjct: 289 GEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIH 343



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>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 12  CFVFSTTLFYRKHGKHTYRCVESKPAVPQYYKQTIIHRDPNN 137
           CF F+T+L    HGKH      ++ A+   +KQ  +  DPNN
Sbjct: 12  CF-FTTSLVMGIHGKHLINDDFNETALLLAFKQNSVKSDPNN 52



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>NFAT5_HUMAN (O94916) Nuclear factor of activated T-cells 5 (T-cell|
           transcription factor NFAT5) (NF-AT5)
           (Tonicity-responsive enhancer-binding protein)
           (TonE-binding protein) (TonEBP)
          Length = 1531

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
 Frame = -1

Query: 419 SFEEKKEAMLNS---LWKINVVDIESTLSRVCQAVLKDSTVSKDVXXXXXXXXXXXGTIF 249
           SFEE  +AM  +   L K+N++        +  +++K    S+DV            TIF
Sbjct: 567 SFEEAMKAMKTTGCNLDKVNIIPNALMTPLIPSSMIK----SEDVTPMEVTAEKRSSTIF 622

Query: 248 QGAKSLYHRENSLRVESPMEGEGTTSS 168
           +  KS+   + +L   S + G G+ SS
Sbjct: 623 KTTKSVGSTQQTLENISNIAGNGSFSS 649



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>ZN578_HUMAN (Q96N58) Zinc finger protein 578|
          Length = 365

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +3

Query: 39  YRKH-GKHTYRCVESKPAVPQ---YYKQTIIHRDPNNSQIVKCQSSVRRCRSLPFHRRFH 206
           +R H G+ +Y+C E      Q     +  IIH      +  +C  +     SLP HRR H
Sbjct: 221 HRLHTGEKSYKCEECDRVFSQKSNLERHKIIHTGEKPYKCNECHKTFSHRSSLPCHRRLH 280

Query: 207 A 209
           +
Sbjct: 281 S 281



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>ZF106_MOUSE (O88466) Zinc finger protein 106 (Zfp-106) (Zinc finger protein 474)|
            (H3a minor histocompatibility antigen) (Son of insulin
            receptor mutant)
          Length = 1888

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 12/49 (24%), Positives = 27/49 (55%)
 Frame = +1

Query: 4    TEXASCLAPPFFTENMENIHTGASRANLRCHNITSRQ*FTEIRIIHKLL 150
            T   +CL     +     ++TG+S   +RC+NI +R+   ++++  ++L
Sbjct: 1576 TSKVNCLLVTHTSGKSSVLYTGSSDHTIRCYNIKTRECMEQLQLEDRVL 1624



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>ZN694_HUMAN (Q63HK3) Zinc finger protein 694|
          Length = 967

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
 Frame = +3

Query: 12   CFVFSTTLFYRKH---GKHTYRCVESKPAVPQ---YYKQTIIHRDPNNSQIVKCQSSVRR 173
            CF  S++L   +    G+  Y+C E   +      +     +H   N  + V C+ S   
Sbjct: 839  CFSQSSSLIIHQRTHTGEKPYQCGECGKSFTNSSHFSAHRRVHTGENPYKCVDCEKSFNN 898

Query: 174  CRSLPFHRRFH 206
            C     HRR H
Sbjct: 899  CTRFREHRRIH 909


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,825,600
Number of Sequences: 219361
Number of extensions: 1170827
Number of successful extensions: 3485
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3485
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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