Clone Name | rbah61d12 |
---|---|
Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 380 bits (976), Expect = e-105 Identities = 184/184 (100%), Positives = 184/184 (100%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA Sbjct: 281 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 340 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV Sbjct: 341 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 400 Query: 316 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSC 137 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSC Sbjct: 401 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSC 460 Query: 136 LYTF 125 LYTF Sbjct: 461 LYTF 464
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 306 bits (784), Expect = 4e-83 Identities = 144/184 (78%), Positives = 164/184 (89%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRA Sbjct: 291 YAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRA 350 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRK+V S G+E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRV Sbjct: 351 RVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRV 410 Query: 316 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSC 137 QLA+TY+SQAALGDAN DA+ G+FYGKGAQQ LPVPEGCTD A+N+DPTARSDDG+C Sbjct: 411 QLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTC 470 Query: 136 LYTF 125 +Y F Sbjct: 471 VYNF 474
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 305 bits (782), Expect = 6e-83 Identities = 144/186 (77%), Positives = 164/186 (88%), Gaps = 2/186 (1%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRA Sbjct: 291 YAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRA 350 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVY DEVRKWV G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRV Sbjct: 351 RVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRV 410 Query: 316 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDG 143 QLAD YMS+AALGDAN DA+K G+FYG A Q G +PVPEGCTD A NYDPTARSDDG Sbjct: 411 QLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDG 470 Query: 142 SCLYTF 125 SC+Y F Sbjct: 471 SCVYKF 476
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 301 bits (772), Expect = 9e-82 Identities = 141/182 (77%), Positives = 161/182 (88%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TD V E VVK+VD FPGQSIDFFGALRA Sbjct: 289 YAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRA 348 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVY DEVRKWV S G++N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRV Sbjct: 349 RVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRV 408 Query: 316 QLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSC 137 QLAD YMS AALGDAN+DA+ G+F+GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Sbjct: 409 QLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSC 468 Query: 136 LY 131 Y Sbjct: 469 TY 470
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 270 bits (691), Expect = 2e-72 Identities = 126/148 (85%), Positives = 140/148 (94%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRA Sbjct: 278 YAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRA 337 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRV Sbjct: 338 RVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRV 397 Query: 316 QLADTYMSQAALGDANQDAMKTGSFYGK 233 QLAD Y+S+AALG AN DAMKTG+FYGK Sbjct: 398 QLADKYLSEAALGQANDDAMKTGAFYGK 425
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 268 bits (686), Expect = 9e-72 Identities = 125/147 (85%), Positives = 139/147 (94%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRA Sbjct: 281 YAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRA 340 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKWV TG+ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRV Sbjct: 341 RVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRV 400 Query: 316 QLADTYMSQAALGDANQDAMKTGSFYG 236 QLA+ Y+S+AALGDAN DAMKTGSFYG Sbjct: 401 QLAEQYLSEAALGDANSDAMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 256 bits (653), Expect = 6e-68 Identities = 118/147 (80%), Positives = 137/147 (93%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRA Sbjct: 291 YAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRA 350 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKW+ G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRV Sbjct: 351 RVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRV 410 Query: 316 QLADTYMSQAALGDANQDAMKTGSFYG 236 QLAD Y+S+AALGDAN DAM TG+FYG Sbjct: 411 QLADKYLSEAALGDANSDAMNTGTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 255 bits (651), Expect = 1e-67 Identities = 117/146 (80%), Positives = 137/146 (93%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRA Sbjct: 287 YAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRA 346 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVR+WV TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRV Sbjct: 347 RVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRV 406 Query: 316 QLADTYMSQAALGDANQDAMKTGSFY 239 QLAD Y+++AALG+AN+DAMKTGSF+ Sbjct: 407 QLADKYLNEAALGEANEDAMKTGSFF 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 254 bits (649), Expect = 2e-67 Identities = 121/145 (83%), Positives = 135/145 (93%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRA Sbjct: 295 YAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRA 354 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKWV TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRV Sbjct: 355 RVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRV 414 Query: 316 QLADTYMSQAALGDANQDAMKTGSF 242 QLA+TY+ +AALGDAN DA+ TG+F Sbjct: 415 QLAETYLKEAALGDANADAINTGNF 439
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 253 bits (645), Expect = 5e-67 Identities = 120/143 (83%), Positives = 135/143 (94%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRA Sbjct: 290 YAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRA 349 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKWV TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRV Sbjct: 350 RVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRV 409 Query: 316 QLADTYMSQAALGDANQDAMKTG 248 QLA+TY+ +AALGDAN DA+ TG Sbjct: 410 QLAETYLKEAALGDANADAINTG 432
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 252 bits (644), Expect = 6e-67 Identities = 116/145 (80%), Positives = 135/145 (93%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRA Sbjct: 291 YAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRA 350 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKWV G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRV Sbjct: 351 RVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRV 410 Query: 316 QLADTYMSQAALGDANQDAMKTGSF 242 QLAD YMS+AALGDANQDA+K G+F Sbjct: 411 QLADKYMSEAALGDANQDAIKRGTF 435
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 248 bits (634), Expect = 9e-66 Identities = 119/146 (81%), Positives = 130/146 (89%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TDNV E VVKIVD FPGQSIDFFGALRA Sbjct: 295 YAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRA 354 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKWV TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRV Sbjct: 355 RVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRV 414 Query: 316 QLADTYMSQAALGDANQDAMKTGSFY 239 QLAD Y+ +AALGDAN DA+ GSF+ Sbjct: 415 QLADKYLKEAALGDANADAINNGSFF 440
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 244 bits (622), Expect = 2e-64 Identities = 109/146 (74%), Positives = 135/146 (92%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRA Sbjct: 293 YAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRA 352 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKW+ G++ GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRV Sbjct: 353 RVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRV 412 Query: 316 QLADTYMSQAALGDANQDAMKTGSFY 239 QLAD Y+++AALG+AN+DA+K+GSF+ Sbjct: 413 QLADKYLNEAALGNANEDAIKSGSFF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 235 bits (600), Expect = 8e-62 Identities = 106/146 (72%), Positives = 133/146 (91%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD PGQSIDFFGALRA Sbjct: 295 YAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRA 354 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKW+ G++++GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRV Sbjct: 355 RVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRV 414 Query: 316 QLADTYMSQAALGDANQDAMKTGSFY 239 QLAD Y+++AALG+AN+DA+K+GSF+ Sbjct: 415 QLADQYLNEAALGNANEDAIKSGSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 203 bits (516), Expect = 4e-52 Identities = 93/122 (76%), Positives = 108/122 (88%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRM+KFYWAPTR+DRIG+C GIF+TD V E +VK+VDTFPGQSIDFFGALRA Sbjct: 288 YAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRA 347 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDDEVRKW G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV Sbjct: 348 RVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRV 407 Query: 316 QL 311 +L Sbjct: 408 KL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 176 bits (447), Expect = 4e-44 Identities = 86/132 (65%), Positives = 102/132 (77%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEK+YW PTR+DRIGVC GIFQ DNV V +VDTFPGQSIDFFGALRA Sbjct: 264 YAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRA 323 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 RVYDD VR+W+ TG++ IG++LVN+R V + M + L++YG LV EQ+NVKRV Sbjct: 324 RVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRV 382 Query: 316 QLADTYMSQAAL 281 QLAD Y+S A L Sbjct: 383 QLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 145 bits (365), Expect = 1e-34 Identities = 64/126 (50%), Positives = 89/126 (70%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYW P RD+++G+ GIF D +S V K+VD+FP QSIDFF ALR+ Sbjct: 164 YAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRS 223 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 R+YD+++R ++ G EN+ R+VNS +GP F++P T+ L+E + +V EQ ++ Sbjct: 224 RIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETS 283 Query: 316 QLADTY 299 QL D Y Sbjct: 284 QLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 139 bits (351), Expect = 6e-33 Identities = 63/126 (50%), Positives = 87/126 (69%) Frame = -3 Query: 676 YAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRA 497 YAPLIRDGRMEKFYW P RDD++G+ GIF D +S + ++VDTFP QSIDFF ALR+ Sbjct: 164 YAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRS 223 Query: 496 RVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRV 317 R+YD ++R ++ G E I R+VNS + P F++P ++ L+E G++++ EQ V Sbjct: 224 RIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNS 283 Query: 316 QLADTY 299 QL D Y Sbjct: 284 QLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 47.0 bits (110), Expect = 5e-05 Identities = 27/60 (45%), Positives = 30/60 (50%) Frame = -3 Query: 550 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 371 +VDTFPGQSIDFFGAL R+GP TFEQP MT+EK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 868 Score = 32.3 bits (72), Expect = 1.4 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%) Frame = +2 Query: 239 VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXXEGHGPVP 418 VEG+ HR L + + AHVG +LDI L DE V + G Sbjct: 671 VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728 Query: 419 RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 589 + + +A V + + V+ + Q+T + L EG++ + L +T + E Sbjct: 729 KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780 Query: 590 -DTLADTDTVVTGGSPVELLHTTITD 664 L + V+ G PV H + D Sbjct: 781 WTQLGHNEPVIDAGWPVFDAHALVQD 806
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = +3 Query: 198 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 374 P G+ K+P +P KE L P AW + C R+ C W + C S+ Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301 Query: 375 STVI 386 I Sbjct: 302 QAFI 305
>LEPA_HELPY (O25122) GTP-binding protein lepA| Length = 602 Score = 30.4 bits (67), Expect = 5.2 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = -3 Query: 553 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 374 KI+ T P S DF L+A +YD ++G+ LV DG + EQ + + Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232 Query: 373 KLLEYGHMLVQEQDNVKRV 317 ++G + + + +K++ Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251
>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)| Length = 462 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +2 Query: 467 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 592 P H I ++P+T E+++ L W G DD+++ L G D Sbjct: 5 PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 6.7 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 303 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 407 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier| family 20 member 1-B) Length = 685 Score = 29.6 bits (65), Expect = 8.8 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Frame = +2 Query: 128 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 301 G++ ++AP W++VLG ++ F G + + SF GT++ +V++ Q+C+ Sbjct: 15 GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69 Query: 302 GVSKLHTLDIVLL 340 S T+ VLL Sbjct: 70 -ASIFETVGSVLL 81
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 29.6 bits (65), Expect = 8.8 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -3 Query: 469 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 362 W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial| protein Length = 442 Score = 29.6 bits (65), Expect = 8.8 Identities = 19/36 (52%), Positives = 21/36 (58%) Frame = -2 Query: 251 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 144 +FL R RS R AR R K Q LRPNG E+RR Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,666,019 Number of Sequences: 219361 Number of extensions: 1891524 Number of successful extensions: 5730 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 5519 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5727 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)