ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 1281 0.0
2gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 858 0.0
3gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 749 0.0
4gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 747 0.0
5gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 747 0.0
6gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 591 e-165
7gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 565 e-158
8emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 486 e-134
9dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 236 8e-59
10dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 236 8e-59
11gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 190 4e-45
12gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 190 4e-45
13dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
14dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
15dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
16dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
17dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45
18dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 190 4e-45
19gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 170 4e-39
20gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 151 4e-33
21gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
22gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
23dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
24gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
25ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2... 139 1e-29
26ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2... 139 1e-29
27ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2... 139 1e-29
28gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)... 139 1e-29
29gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c... 139 1e-29
30gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730... 139 1e-29
31gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ... 139 1e-29
32gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp... 139 1e-29
33gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl... 139 1e-29
34gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl... 139 1e-29
35gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730... 139 1e-29
36gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se... 139 1e-29
37gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha... 139 1e-29
38gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 123 8e-25
39gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 123 8e-25
40gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 123 8e-25
41gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 123 8e-25
42gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/... 121 3e-24
43gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas... 121 3e-24
44gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds 121 3e-24
45gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec... 111 3e-21
46gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi... 107 5e-20
47gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet... 101 3e-18
48emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car... 101 3e-18
49emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat... 100 1e-17
50gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 98 5e-17
51gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 96 2e-16
52gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 96 2e-16
53gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur... 92 3e-15
54gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur... 92 3e-15
55gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part... 88 4e-14
56gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence 88 4e-14
57gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence 86 2e-13
58gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1... 86 2e-13
59gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 84 7e-13
60emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha... 84 7e-13
61gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph... 80 1e-11
62emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase 80 1e-11
63gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m... 80 1e-11
64gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen... 78 4e-11
65gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen... 78 4e-11
66gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen... 78 4e-11
67gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen... 78 4e-11
68gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen... 78 4e-11
69gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen... 78 4e-11
70gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen... 78 4e-11
71gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen... 78 4e-11
72gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen... 78 4e-11
73dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
74dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
75gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb... 72 3e-09
76emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph... 72 3e-09
77gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen... 72 3e-09
78gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen... 72 3e-09
79gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen... 72 3e-09
80gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen... 72 3e-09
81gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen... 72 3e-09
82gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom... 72 3e-09
83gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso... 72 3e-09
84gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph... 68 4e-08
85gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence 66 2e-07
86emb|Y10657.1|CLRCAGENE C.littorale rca gene 66 2e-07
87gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA... 64 6e-07
88gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate... 62 3e-06
89gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ... 60 1e-05
90gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car... 60 1e-05
91emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase 58 4e-05
92emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis... 54 6e-04
93emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase 52 0.002
94gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se... 48 0.038
95gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se... 48 0.038
96gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s... 46 0.15
97ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7... 44 0.59
98gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com... 44 0.59
99gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com... 44 0.59
100emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co... 44 0.59
101emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co... 44 0.59
102gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl... 44 0.59
103dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ... 44 0.59
104gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N... 44 0.59
105emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, c... 44 0.59
106gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, comp... 42 2.3
107gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Canc... 42 2.3
108emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom... 42 2.3
109emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chr... 42 2.3
110gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, comp... 42 2.3
111dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
112gb|AF532116.1| Mus musculus strain 129/SvJ BAC clone citb585c7 f... 42 2.3
113gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23... 42 2.3
114gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
115emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.3
116gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, comp... 42 2.3
117gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet... 40 9.3
118gb|U60105.1| Bos taurus large conductance calcium-activated pota... 40 9.3
119ref|XM_765396.1| Giardia lamblia ATCC 50803 heat shock protein (... 40 9.3
120ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001... 40 9.3
121emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot... 40 9.3
122gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet... 40 9.3
123gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete... 40 9.3
124gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp... 40 9.3
125gb|AF026000.2| Sus scrofa calcium-activated potassium channel al... 40 9.3
126emb|AL049563.4|HS68D15 Human DNA sequence from clone RP1-68D15 o... 40 9.3
127gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co... 40 9.3
128ref|NM_174680.2| Bos taurus potassium large conductance calcium-... 40 9.3
129gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 9.3
130dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 40 9.3
131gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN... 40 9.3
132gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN... 40 9.3
133gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN... 40 9.3
134emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 9.3
135gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 9.3
136gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com... 40 9.3
137emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co... 40 9.3
138gb|AC093634.3| Homo sapiens BAC clone RP11-168E14 from 4, comple... 40 9.3
139ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ... 40 9.3
140emb|BX548013.3| Mouse DNA sequence from clone RP23-452C18 on chr... 40 9.3
141gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone... 40 9.3

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 1281 bits (646), Expect = 0.0
 Identities = 662/666 (99%), Gaps = 1/666 (0%)
 Strand = Plus / Minus

                                                                        
Query: 12   aatgggtatact-aatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 70
            |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 aatgggtatacacaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 1333

                                                                        
Query: 71   atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 1273

                                                                        
Query: 131  gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 1213

                                                                        
Query: 191  ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttaccgtagaaggaacc 250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttaccgtagaaggaacc 1153

                                                                        
Query: 251  agtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 agtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 1093

                                                                        
Query: 311  aagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcag 370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 aagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcag 1033

                                                                        
Query: 371  cttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccag 430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 cttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccag 973

                                                                        
Query: 431  cctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgta 490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972  cctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgta 913

                                                                        
Query: 491  cacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgat 550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912  cacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgat 853

                                                                        
Query: 551  cttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgat 610
            ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 852  ctttacgacagactcgtcacagacattgtcggtctggaagatacccttgcagacaccgat 793

                                                                        
Query: 611  acggtcgtcacgggtgggagcccagtagaacttctccatacgaccatcacggatcagagg 670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792  acggtcgtcacgggtgggagcccagtagaacttctccatacgaccatcacggatcagagg 733

                  
Query: 671  agcgta 676
            ||||||
Sbjct: 732  agcgta 727



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>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  858 bits (433), Expect = 0.0
 Identities = 439/441 (99%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1363

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1303

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 1243

                                                                        
Query: 416  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 1183

                                                                        
Query: 476  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 1123

                                                                        
Query: 536  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 595
            |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1122 gaaggtgtcgacgatctttacgacagactcgtcacagacattgtcggtctggaagatacc 1063

                                                                        
Query: 596  cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 1003

                                 
Query: 656  atcacggatcagaggagcgta 676
            |||||||||||||||||||||
Sbjct: 1002 atcacggatcagaggagcgta 982



 Score =  377 bits (190), Expect = e-101
 Identities = 211/214 (98%), Gaps = 3/214 (1%)
 Strand = Plus / Minus

                                                                        
Query: 28   tatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 tatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 1625

                                                                        
Query: 88   -gtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 146
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 tgtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 1565

                                                                        
Query: 147  t-cgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 205
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 ttcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 1505

                                              
Query: 206  ca-cgggcaaagtaccttgctgtgctcctttacc 238
            || |||||||||||||||||||||||||||||||
Sbjct: 1504 catcgggcaaagtaccttgctgtgctcctttacc 1471



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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  749 bits (378), Expect = 0.0
 Identities = 504/546 (92%)
 Strand = Plus / Minus

                                                                        
Query: 110  aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 169
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                                        
Query: 170  gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 229
            | ||||||||||||   ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370

                                                                        
Query: 230  tcctttaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgc 289
            |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 1369 tcctttaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgc 1310

                                                                        
Query: 290  ctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgag 349
            |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1309 ctggctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaag 1250

                                                                        
Query: 350  catgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacggg 409
            |||||| |||||||| |||| |||||| || |||||||| |||||||||||||| |||||
Sbjct: 1249 catgtggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacggg 1190

                                                                        
Query: 410  cccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgaccca 469
             ||||||||||||||||||||||||||||| |||||||| |||||||| ||    |||||
Sbjct: 1189 tccgtcccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacaccca 1130

                                                                        
Query: 470  cttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattg 529
            |||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 1129 cttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactg 1070

                                                                        
Query: 530  tcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaa 589
            ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1069 tcctgggaaggtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaa 1010

                                                                        
Query: 590  gatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 649
            ||||||||||||||| ||||||||||| || |||||||| |||||||| |||||||||||
Sbjct: 1009 gatacccttgcagacgccgatacggtcctcgcgggtgggcgcccagtaaaacttctccat 950

                  
Query: 650  acgacc 655
            ||||||
Sbjct: 949  acgacc 944



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>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  747 bits (377), Expect = 0.0
 Identities = 425/441 (96%)
 Strand = Plus / Minus

                                                                       
Query: 236 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 accgtagaaggtaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 433

                                                                       
Query: 296 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 373

                                                                       
Query: 356 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
           ||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 372 cccgtactctagcagcttctccactgtcatctttggctgctcaaaggtcactggtccgtc 313

                                                                       
Query: 416 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 475
           |||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||
Sbjct: 312 ccgcgagttcaccagcttcttgccaatgttctcgataccggtagaggtcacccacttgcg 253

                                                                       
Query: 476 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 535
           |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 252 cacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatggattgtcctgg 193

                                                                       
Query: 536 gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 595
           |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 192 gaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtctggaagatacc 133

                                                                       
Query: 596 cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 655
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 132 cttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaacttctccatacgacc 73

                                
Query: 656 atcacggatcagaggagcgta 676
           ||||||||||||||| |||||
Sbjct: 72  atcacggatcagaggggcgta 52



 Score =  246 bits (124), Expect = 8e-62
 Identities = 189/208 (90%), Gaps = 7/208 (3%)
 Strand = Plus / Minus

                                                                       
Query: 37  atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 90
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 746 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 687

                                                                       
Query: 91  ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 150
           | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 686 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 628

                                                                       
Query: 151 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 210
           | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 627 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 568

                                       
Query: 211 gcaaagtaccttgctgtgctcctttacc 238
           ||||||||||||||||||| ||||||||
Sbjct: 567 gcaaagtaccttgctgtgcccctttacc 540



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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  747 bits (377), Expect = 0.0
 Identities = 425/441 (96%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 accgtagaaggtaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1283

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1223

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
            ||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 1222 cccgtactctagcagcttctccactgtcatctttggctgctcaaaggtcactggtccgtc 1163

                                                                        
Query: 416  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 475
            |||||||||||||||| ||||||||||||||||||| |||||||||   |||||||||||
Sbjct: 1162 ccgcgagttcaccagcttcttgccaatgttctcgataccggtagaggtcacccacttgcg 1103

                                                                        
Query: 476  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 535
            |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1102 cacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcgatggattgtcctgg 1043

                                                                        
Query: 536  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 595
            |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1042 gaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcggtctggaagatacc 983

                                                                        
Query: 596  cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 655
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 982  cttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaacttctccatacgacc 923

                                 
Query: 656  atcacggatcagaggagcgta 676
            ||||||||||||||| |||||
Sbjct: 922  atcacggatcagaggggcgta 902



 Score =  246 bits (124), Expect = 8e-62
 Identities = 189/208 (90%), Gaps = 7/208 (3%)
 Strand = Plus / Minus

                                                                        
Query: 37   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 90
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537

                                                                        
Query: 91   ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 150
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478

                                                                        
Query: 151  cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 210
            | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418

                                        
Query: 211  gcaaagtaccttgctgtgctcctttacc 238
            ||||||||||||||||||| ||||||||
Sbjct: 1417 gcaaagtaccttgctgtgcccctttacc 1390



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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  591 bits (298), Expect = e-165
 Identities = 396/429 (92%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 1353 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1294

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1293 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1234

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1233 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1174

                                                                        
Query: 416  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 475
            |||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||||
Sbjct: 1173 ccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttgcg 1114

                                                                        
Query: 476  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 535
            ||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 1113 cacctcaacgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcctgg 1054

                                                                        
Query: 536  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 595
            ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1053 gaangtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaagatacc 994

                                                                        
Query: 596  cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 655
            ||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 993  cttgcagacgccgatacggtcctcgcgggtgggcgcccagtagaacttctccatacgacc 934

                     
Query: 656  atcacggat 664
             ||||||||
Sbjct: 933  gtcacggat 925



 Score =  180 bits (91), Expect = 4e-42
 Identities = 171/195 (87%), Gaps = 7/195 (3%)
 Strand = Plus / Minus

                                                                        
Query: 51   catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 104
            ||||||||||| ||||||| |||||||||||  ||||||||      || ||||||||||
Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534

                                                                        
Query: 105  -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 163
             || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474

                                                                        
Query: 164  tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 223
            ||||||| ||||||||||||   ||||||| |||||||||||||| |||||||| |||||
Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414

                           
Query: 224  ctgtgctcctttacc 238
             ||||||||||||||
Sbjct: 1413 ttgtgctcctttacc 1399



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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  565 bits (285), Expect = e-158
 Identities = 285/285 (100%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7305 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 7246

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7245 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 7186

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7185 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 7126

                                                                        
Query: 416  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7125 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 7066

                                                         
Query: 476  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 520
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7065 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 7021



 Score =  436 bits (220), Expect = e-119
 Identities = 237/240 (98%), Gaps = 2/240 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tggtctttgccaa-tgggtatact-aatatatttagagatatattaacaaaacatgccca 58
            ||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 7764 tggtctttgccaaatgggtatacacaatatatttagagatatattaacaaaacatgccca 7705

                                                                        
Query: 59   gcaatcgcttggatgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggca 118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7704 gcaatcgcttggatgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggca 7645

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7644 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 7585

                                                                        
Query: 179  ggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7584 ggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 7525



 Score =  311 bits (157), Expect = 2e-81
 Identities = 157/157 (100%)
 Strand = Plus / Minus

                                                                        
Query: 520  caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6880 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 6821

                                                                        
Query: 580  cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6820 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 6761

                                                 
Query: 640  acttctccatacgaccatcacggatcagaggagcgta 676
            |||||||||||||||||||||||||||||||||||||
Sbjct: 6760 acttctccatacgaccatcacggatcagaggagcgta 6724



 Score =  151 bits (76), Expect = 4e-33
 Identities = 181/216 (83%)
 Strand = Plus / Minus

                                                                        
Query: 461  gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 520
            ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| |||||
Sbjct: 3812 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 3753

                                                                        
Query: 521  aatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtc 580
             ||||| || || ||||||||||| || | | | || || | ||||||   ||| |||||
Sbjct: 3752 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 3693

                                                                        
Query: 581  ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 640
            |||  ||||||| |||||||| || ||||| ||||| || |||||||| |||||||||||
Sbjct: 3692 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 3633

                                                
Query: 641  cttctccatacgaccatcacggatcagaggagcgta 676
            ||||||||| || || ||||||||||| ||||||||
Sbjct: 3632 cttctccatgcgcccgtcacggatcaggggagcgta 3597



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 312  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 371
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902

                                         
Query: 372  ttctcgactgtcatctttggctgctcgaa 400
            ||||| |  |||||||| ||||| |||||
Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873



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>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  486 bits (245), Expect = e-134
 Identities = 275/285 (96%)
 Strand = Plus / Minus

                                                                       
Query: 236 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 227

                                                                       
Query: 296 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 167

                                                                       
Query: 356 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
           |||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 166 cccgtactctagcagcttctcgactgtcatctttggctgctcaaaggtcactggtccgtc 107

                                                                       
Query: 416 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 475
           |||||||||||| ||| ||||||||||||||||||| |||||||||   |||||||||||
Sbjct: 106 ccgcgagttcacaagcttcttgccaatgttctcgataccggtagaggtcacccacttgcg 47

                                                        
Query: 476 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 520
           |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 46  cacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtc 2



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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  236 bits (119), Expect = 8e-59
 Identities = 280/333 (84%), Gaps = 3/333 (0%)
 Strand = Plus / Minus

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                                                        
Query: 179  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 235
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1311

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
             ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1310 cccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1251

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1250 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1191

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1190 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1131

                                             
Query: 416  ccgcgagttcaccagcctcttgccaatgttctc 448
            || ||||||||||||||||||||||||||||||
Sbjct: 1130 cctcgagttcaccagcctcttgccaatgttctc 1098



 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                        
Query: 465  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1081 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1022

                                                                        
Query: 525  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1021 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 962

                                                                        
Query: 585  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 961  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 902

                                
Query: 645  tccatacgaccatcacggat 664
            |||||||| || ||||||||
Sbjct: 901  tccatacgcccgtcacggat 882



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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  236 bits (119), Expect = 8e-59
 Identities = 280/333 (84%), Gaps = 3/333 (0%)
 Strand = Plus / Minus

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                                                        
Query: 179  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 235
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1346

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
             ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1345 cccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1286

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1285 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1226

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1225 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1166

                                             
Query: 416  ccgcgagttcaccagcctcttgccaatgttctc 448
            || ||||||||||||||||||||||||||||||
Sbjct: 1165 cctcgagttcaccagcctcttgccaatgttctc 1133



 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                        
Query: 465  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1116 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1057

                                                                        
Query: 525  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1056 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 997

                                                                        
Query: 585  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 996  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 937

                                
Query: 645  tccatacgaccatcacggat 664
            |||||||| || ||||||||
Sbjct: 936  tccatacgcccgtcacggat 917



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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                        
Query: 465  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1086 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1027

                                                                        
Query: 525  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1026 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 967

                                                                        
Query: 585  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 966  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 907

                                
Query: 645  tccatacgaccatcacggat 664
            |||||||| || ||||||||
Sbjct: 906  tccatacgcccgtcacggat 887



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 179  ggcattttggtcggtgcaaccttccggcacgggca 213
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1315 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1256

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1255 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1196

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1195 tccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1136

                                             
Query: 416  ccgcgagttcaccagcctcttgccaatgttctc 448
            || ||||||||||||||||||||||||||||||
Sbjct: 1135 cctcgagttcaccagcctcttgccaatgttctc 1103



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>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                       
Query: 465 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
           ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 335 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 276

                                                                       
Query: 525 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
           ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 275 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 216

                                                                       
Query: 585 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
            ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 215 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 156

                               
Query: 645 tccatacgaccatcacggat 664
           |||||||| || ||||||||
Sbjct: 155 tccatacgcccgtcacggat 136



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                       
Query: 236 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
           |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 564 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 505

                                                                       
Query: 296 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
           || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 504 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 445

                                                                       
Query: 356 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 444 tccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 385

                                            
Query: 416 ccgcgagttcaccagcctcttgccaatgttctc 448
           || ||||||||||||||||||||||||||||||
Sbjct: 384 cctcgagttcaccagcctcttgccaatgttctc 352



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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                        
Query: 465  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1129 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1070

                                                                        
Query: 525  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1069 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 1010

                                                                        
Query: 585  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 1009 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 950

                                
Query: 645  tccatacgaccatcacggat 664
            |||||||| || ||||||||
Sbjct: 949  tccatacgcccgtcacggat 930



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1358 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1299

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1298 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1239

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1238 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1179

                                             
Query: 416  ccgcgagttcaccagcctcttgccaatgttctc 448
            || ||||||||||||||||||||||||||||||
Sbjct: 1178 cctcgagttcaccagcctcttgccaatgttctc 1146



 Score =  117 bits (59), Expect = 5e-23
 Identities = 87/95 (91%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                               
Query: 179  ggcattttggtcggtgcaaccttccggcacgggca 213
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggca 1469



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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                        
Query: 465  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1080 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1021

                                                                        
Query: 525  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1020 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 961

                                                                        
Query: 585  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 960  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 901

                                
Query: 645  tccatacgaccatcacggat 664
            |||||||| || ||||||||
Sbjct: 900  tccatacgcccgtcacggat 881



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                               
Query: 179  ggcattttggtcggtgcaaccttccggcacgggca 213
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggca 1420



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1309 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1250

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1249 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1190

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1189 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1130

                                             
Query: 416  ccgcgagttcaccagcctcttgccaatgttctc 448
            || ||||||||||||||||||||||||||||||
Sbjct: 1129 cctcgagttcaccagcctcttgccaatgttctc 1097



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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                        
Query: 465  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1118 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1059

                                                                        
Query: 525  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1058 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 999

                                                                        
Query: 585  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 998  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 939

                                
Query: 645  tccatacgaccatcacggat 664
            |||||||| || ||||||||
Sbjct: 938  tccatacgcccgtcacggat 919



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                               
Query: 179  ggcattttggtcggtgcaaccttccggcacgggca 213
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggca 1458



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1347 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1288

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1287 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1228

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1227 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1168

                                             
Query: 416  ccgcgagttcaccagcctcttgccaatgttctc 448
            || ||||||||||||||||||||||||||||||
Sbjct: 1167 cctcgagttcaccagcctcttgccaatgttctc 1135



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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                        
Query: 465  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1117 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1058

                                                                        
Query: 525  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1057 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 998

                                                                        
Query: 585  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 997  cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 938

                                
Query: 645  tccatacgaccatcacggat 664
            |||||||| || ||||||||
Sbjct: 937  tccatacgcccgtcacggat 918



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                               
Query: 179  ggcattttggtcggtgcaaccttccggcacgggca 213
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggca 1457



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1346 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1287

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1286 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1227

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1226 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1167

                                             
Query: 416  ccgcgagttcaccagcctcttgccaatgttctc 448
            || ||||||||||||||||||||||||||||||
Sbjct: 1166 cctcgagttcaccagcctcttgccaatgttctc 1134



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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                       
Query: 465 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
           ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 901 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 842

                                                                       
Query: 525 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
           ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 841 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 782

                                                                       
Query: 585 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
            ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 781 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 722

                               
Query: 645 tccatacgaccatcacggat 664
           |||||||| || ||||||||
Sbjct: 721 tccatacgcccgtcacggat 702



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                               
Query: 179  ggcattttggtcggtgcaaccttccggcacgggca 213
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggca 1241



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1130 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1071

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1070 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1011

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1010 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 951

                                             
Query: 416  ccgcgagttcaccagcctcttgccaatgttctc 448
            || ||||||||||||||||||||||||||||||
Sbjct: 950  cctcgagttcaccagcctcttgccaatgttctc 918



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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  190 bits (96), Expect = 4e-45
 Identities = 174/200 (87%)
 Strand = Plus / Minus

                                                                        
Query: 465  acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
            ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || |||
Sbjct: 1122 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1063

                                                                        
Query: 525  gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 584
            ||||| ||||||||| ||||||||||||||||||    ||||||   ||| |||||||| 
Sbjct: 1062 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 1003

                                                                        
Query: 585  tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 644
             ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 1002 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 943

                                
Query: 645  tccatacgaccatcacggat 664
            |||||||| || ||||||||
Sbjct: 942  tccatacgcccgtcacggat 923



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 119  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                               
Query: 179  ggcattttggtcggtgcaaccttccggcacgggca 213
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggca 1462



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 236  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1351 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1292

                                                                        
Query: 296  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1291 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1232

                                                                        
Query: 356  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1231 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1172

                                             
Query: 416  ccgcgagttcaccagcctcttgccaatgttctc 448
            || ||||||||||||||||||||||||||||||
Sbjct: 1171 cctcgagttcaccagcctcttgccaatgttctc 1139



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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  170 bits (86), Expect = 4e-39
 Identities = 275/338 (81%)
 Strand = Plus / Minus

                                                                        
Query: 312  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 371
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                                                                        
Query: 372  ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 431
            |||||||  |||||||| ||||| ||||| |||   ||||| ||||  ||||| || |||
Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagc 1123

                                                                        
Query: 432  ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 491
            | ||||   ||||||||||  ||| |   ||||||||||||||||||||| |||||||||
Sbjct: 1122 cgcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 1063

                                                                        
Query: 492  acccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatc 551
            ||||| || ||||| || ||||| ||||| ||||| || || ||||||||||| || | |
Sbjct: 1062 acccgcgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 1003

                                                                        
Query: 552  ttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgata 611
             | || || | ||||||   ||| ||||||||  ||||||| |||||||| || ||||| 
Sbjct: 1002 ctcaccacggcctcgtcggggacgttgtcggtgcggaagatgcccttgcacacgccgatg 943

                                                  
Query: 612  cggtcgtcacgggtgggagcccagtagaacttctccat 649
            ||||| || |||||||| ||||||||||||||||||||
Sbjct: 942  cggtcctcccgggtgggcgcccagtagaacttctccat 905



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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  151 bits (76), Expect = 4e-33
 Identities = 181/216 (83%)
 Strand = Plus / Minus

                                                                        
Query: 461  gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 520
            ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| |||||
Sbjct: 1243 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 1184

                                                                        
Query: 521  aatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtc 580
             ||||| || || ||||||||||| || | | | || || | ||||||   ||| |||||
Sbjct: 1183 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 1124

                                                                        
Query: 581  ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 640
            |||  ||||||| |||||||| || ||||| ||||| || |||||||| |||||||||||
Sbjct: 1123 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 1064

                                                
Query: 641  cttctccatacgaccatcacggatcagaggagcgta 676
            ||||||||| || || ||||||||||| ||||||||
Sbjct: 1063 cttctccatgcgcccgtcacggatcaggggagcgta 1028



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 312  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 371
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333

                                         
Query: 372  ttctcgactgtcatctttggctgctcgaa 400
            ||||| |  |||||||| ||||| |||||
Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304



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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                          
Query: 522    atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 581
              |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 108688 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 108747

                                                                          
Query: 582    gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 641
              ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 108748 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 108807

                                     
Query: 642    ttctccatacgaccatcacggat 664
              ||||||||||| || ||||||||
Sbjct: 108808 ttctccatacgcccgtcacggat 108830



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                          
Query: 119    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 179    ggcattttggtcggtgcaaccttccggcacgggca 213
              ||||    |||||||||||||||||||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                          
Query: 236    accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
              |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 108310 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 108369

                                                                          
Query: 296    catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
              || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 108370 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 108429

                                                                          
Query: 356    cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
               |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 108430 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 108489

                                               
Query: 416    ccgcgagttcaccagcctcttgccaatgttctc 448
              || ||||||||||||||||||||||||||||||
Sbjct: 108490 cctcgagttcaccagcctcttgccaatgttctc 108522



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 586    ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
              ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 112456 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 112515

                  
Query: 646    ccat 649
              ||||
Sbjct: 112516 ccat 112519



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                          
Query: 137    gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 196
              ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112

                             
Query: 197    accttccggcacggg 211
               ||  ||||||||||
Sbjct: 112113 tcccgccggcacggg 112127



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 465    acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 514
              ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 108539 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 108588



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 420    gagttcaccagcctcttgccaatgttctc 448
              ||||||||||||||| |||| ||||||||
Sbjct: 112324 gagttcaccagcctcctgccgatgttctc 112352



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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                         
Query: 522   atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 581
             |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 30565 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 30624

                                                                         
Query: 582   gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 641
             ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 30625 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 30684

                                    
Query: 642   ttctccatacgaccatcacggat 664
             ||||||||||| || ||||||||
Sbjct: 30685 ttctccatacgcccgtcacggat 30707



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 119   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 179   ggcattttggtcggtgcaaccttccggcacgggca 213
             ||||    |||||||||||||||||||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                         
Query: 236   accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
             |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 30187 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 30246

                                                                         
Query: 296   catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
             || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 30247 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 30306

                                                                         
Query: 356   cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 30307 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 30366

                                              
Query: 416   ccgcgagttcaccagcctcttgccaatgttctc 448
             || ||||||||||||||||||||||||||||||
Sbjct: 30367 cctcgagttcaccagcctcttgccaatgttctc 30399



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                         
Query: 586   ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
             ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 34333 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 34392

                 
Query: 646   ccat 649
             ||||
Sbjct: 34393 ccat 34396



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 137   gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 196
             ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989

                            
Query: 197   accttccggcacggg 211
              ||  ||||||||||
Sbjct: 33990 tcccgccggcacggg 34004



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 465   acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 514
             ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 30416 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 30465



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 420   gagttcaccagcctcttgccaatgttctc 448
             ||||||||||||||| |||| ||||||||
Sbjct: 34201 gagttcaccagcctcctgccgatgttctc 34229



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                            
Query: 522      atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 581
                |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 28303827 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28303886

                                                                            
Query: 582      gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 641
                ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 28303887 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28303946

                                       
Query: 642      ttctccatacgaccatcacggat 664
                ||||||||||| || ||||||||
Sbjct: 28303947 ttctccatacgcccgtcacggat 28303969



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 119      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 179      ggcattttggtcggtgcaaccttccggcacgggca 213
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                            
Query: 236      accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
                |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 28303449 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 28303508

                                                                            
Query: 296      catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
                || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 28303509 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 28303568

                                                                            
Query: 356      cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
                 |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 28303569 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 28303628

                                                 
Query: 416      ccgcgagttcaccagcctcttgccaatgttctc 448
                || ||||||||||||||||||||||||||||||
Sbjct: 28303629 cctcgagttcaccagcctcttgccaatgttctc 28303661



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 586      ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
                ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 28307595 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28307654

                    
Query: 646      ccat 649
                ||||
Sbjct: 28307655 ccat 28307658



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 137      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 196
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251

                               
Query: 197      accttccggcacggg 211
                 ||  ||||||||||
Sbjct: 28307252 tcccgccggcacggg 28307266



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 465      acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 514
                ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 28303678 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28303727



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 420      gagttcaccagcctcttgccaatgttctc 448
                ||||||||||||||| |||| ||||||||
Sbjct: 28307463 gagttcaccagcctcctgccgatgttctc 28307491



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  149 bits (75), Expect = 1e-32
 Identities = 126/143 (88%)
 Strand = Plus / Plus

                                                                            
Query: 522      atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 581
                |||||||| ||||||||| ||||||||||||||||||    ||||||   ||| ||||||
Sbjct: 28286276 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28286335

                                                                            
Query: 582      gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 641
                ||  ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 28286336 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28286395

                                       
Query: 642      ttctccatacgaccatcacggat 664
                ||||||||||| || ||||||||
Sbjct: 28286396 ttctccatacgcccgtcacggat 28286418



 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 119      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 179      ggcattttggtcggtgcaaccttccggcacgggca 213
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score =  121 bits (61), Expect = 3e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                            
Query: 236      accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 295
                |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 28285898 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 28285957

                                                                            
Query: 296      catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 355
                || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 28285958 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 28286017

                                                                            
Query: 356      cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 415
                 |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 28286018 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 28286077

                                                 
Query: 416      ccgcgagttcaccagcctcttgccaatgttctc 448
                || ||||||||||||||||||||||||||||||
Sbjct: 28286078 cctcgagttcaccagcctcttgccaatgttctc 28286110



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 586      ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
                ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| |
Sbjct: 28290044 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28290103

                    
Query: 646      ccat 649
                ||||
Sbjct: 28290104 ccat 28290107



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 137      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 196
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700

                               
Query: 197      accttccggcacggg 211
                 ||  ||||||||||
Sbjct: 28289701 tcccgccggcacggg 28289715



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 465      acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 514
                ||||||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 28286127 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28286176



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 420      gagttcaccagcctcttgccaatgttctc 448
                ||||||||||||||| |||| ||||||||
Sbjct: 28289912 gagttcaccagcctcctgccgatgttctc 28289940



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>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 1074 catacgtccatcacggatgagaggagcgta 1045



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>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 1074 catacgtccatcacggatgagaggagcgta 1045



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>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 1103 catacgtccatcacggatgagaggagcgta 1074



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>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 985  catacgtccatcacggatgagaggagcgta 956



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>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Minus

                                                                        
Query: 507  gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 566
            |||||||| || ||||| ||||| || |||||||||||||||| |||||| ||    || 
Sbjct: 1164 gcaccgaagaaatcaatagattggccagggaaggtgtcgacgagcttgacaacgtggtcc 1105

                                                                        
Query: 567  tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 626
            |||   ||||||||||||  |||||||||  ||   |||||||||||||| |||||||||
Sbjct: 1104 tcaggaacattgtcggtcctgaagataccggtggcaacaccgatacggtcctcacgggtg 1045

                                                              
Query: 627  ggagcccagtagaacttctccatacgaccatcacggatcagaggagcgta 676
            |||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1044 ggagcccagtagaacttctccatacgaccatcacggataaggggagcgta 995



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>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                       
Query: 587 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
           |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 960 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 901

                                         
Query: 647 catacgaccatcacggatcagaggagcgta 676
           |||||| ||||||||||| |||||||||||
Sbjct: 900 catacgtccatcacggatgagaggagcgta 871



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>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                         
Query: 587   gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
             |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 14154 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 14213

                                           
Query: 647   catacgaccatcacggatcagaggagcgta 676
             |||||| ||||||||||| |||||||||||
Sbjct: 14214 catacgtccatcacggatgagaggagcgta 14243



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>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 988  catacgtccatcacggatgagaggagcgta 959



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>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1037 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 978

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 977  catacgtccatcacggatgagaggagcgta 948



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>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 985  catacgtccatcacggatgagaggagcgta 956



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>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 988  catacgtccatcacggatgagaggagcgta 959



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>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 1103 catacgtccatcacggatgagaggagcgta 1074



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>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3129 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 3070

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            |||||| ||||||||||| |||||||||||
Sbjct: 3069 catacgtccatcacggatgagaggagcgta 3040



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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  123 bits (62), Expect = 8e-25
 Identities = 164/198 (82%)
 Strand = Plus / Minus

                                                                        
Query: 467  ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 526
            |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 1074 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 1015

                                                                        
Query: 527  ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 586
            ||| || |||||||||||||||| ||||| ||||  ||| |    ||| ||||||| |  
Sbjct: 1014 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 955

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||  ||||||| ||||  ||||| || | ||||||||||||||||||||||||
Sbjct: 954  gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 895

                              
Query: 647  catacgaccatcacggat 664
            ||||||||| ||||||||
Sbjct: 894  catacgaccgtcacggat 877



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 240  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 299
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1301 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1242

                                                                        
Query: 300  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 359
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1241 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1182

                                                                        
Query: 360  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 419
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1181 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1122

                             
Query: 420  gagttcaccagcctctt 436
            |||||||||||||||||
Sbjct: 1121 gagttcaccagcctctt 1105



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 129  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 188
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 189  tcggtgcaaccttc 202
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377



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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  123 bits (62), Expect = 8e-25
 Identities = 164/198 (82%)
 Strand = Plus / Minus

                                                                       
Query: 467 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 526
           |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 937 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 878

                                                                       
Query: 527 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 586
           ||| || |||||||||||||||| ||||| ||||  ||| |    ||| ||||||| |  
Sbjct: 877 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 818

                                                                       
Query: 587 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
           |||||||||  ||||||| ||||  ||||| || | ||||||||||||||||||||||||
Sbjct: 817 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 758

                             
Query: 647 catacgaccatcacggat 664
           ||||||||| ||||||||
Sbjct: 757 catacgaccgtcacggat 740



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 240  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 299
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105

                                                                        
Query: 300  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 359
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045

                                                                        
Query: 360  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 419
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985

                             
Query: 420  gagttcaccagcctctt 436
            |||||||||||||||||
Sbjct: 984  gagttcaccagcctctt 968



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 129  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 188
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 189  tcggtgcaaccttc 202
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202



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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  123 bits (62), Expect = 8e-25
 Identities = 164/198 (82%)
 Strand = Plus / Minus

                                                                       
Query: 467 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 526
           |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 773 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 714

                                                                       
Query: 527 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 586
           ||| || |||||||||||||||| ||||| ||||  ||| |    ||| ||||||| |  
Sbjct: 713 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 654

                                                                       
Query: 587 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
           |||||||||  ||||||| ||||  ||||| || | ||||||||||||||||||||||||
Sbjct: 653 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 594

                             
Query: 647 catacgaccatcacggat 664
           ||||||||| ||||||||
Sbjct: 593 catacgaccgtcacggat 576



 Score =  119 bits (60), Expect = 1e-23
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 240  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 299
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1000 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 941

                                                                        
Query: 300  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 359
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 940  tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 881

                                                                        
Query: 360  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 419
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 880  tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 821

                                
Query: 420  gagttcaccagcctcttgcc 439
            ||||||||||||||||||||
Sbjct: 820  gagttcaccagcctcttgcc 801



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 129  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 188
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 189  tcggtgcaaccttc 202
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076



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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  123 bits (62), Expect = 8e-25
 Identities = 164/198 (82%)
 Strand = Plus / Minus

                                                                       
Query: 467 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 526
           |||||| | |||||| |||||||| ||||  || | ||| |||||||| |||||||||||
Sbjct: 967 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 908

                                                                       
Query: 527 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 586
           ||| || |||||||||||||||| ||||| ||||  ||| |    ||| ||||||| |  
Sbjct: 907 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 848

                                                                       
Query: 587 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
           |||||||||  ||||||| ||||  ||||| || | ||||||||||||||||||||||||
Sbjct: 847 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 788

                             
Query: 647 catacgaccatcacggat 664
           ||||||||| ||||||||
Sbjct: 787 catacgaccgtcacggat 770



 Score =  119 bits (60), Expect = 1e-23
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 240  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 299
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135

                                                                        
Query: 300  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 359
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075

                                                                        
Query: 360  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 419
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015

                                
Query: 420  gagttcaccagcctcttgcc 439
            ||||||||||||||||||||
Sbjct: 1014 gagttcaccagcctcttgcc 995



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 129  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 188
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 189  tcggtgcaaccttc 202
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232



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>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  121 bits (61), Expect = 3e-24
 Identities = 73/77 (94%)
 Strand = Plus / Minus

                                                                        
Query: 600  cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 659
            |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2813 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 2754

                             
Query: 660  cggatcagaggagcgta 676
            ||||| || ||||||||
Sbjct: 2753 cggataaggggagcgta 2737



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>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                       
Query: 125 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 184
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 185 ttggtcggtgcaaccttccggcacgggca 213
             |||||||||||||||||||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5



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>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  121 bits (61), Expect = 3e-24
 Identities = 73/77 (94%)
 Strand = Plus / Minus

                                                                        
Query: 600  cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 659
            |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 1126

                             
Query: 660  cggatcagaggagcgta 676
            ||||| || ||||||||
Sbjct: 1125 cggataaggggagcgta 1109



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                        
Query: 480  tcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaag 539
            ||||||||||| || ||||| | ||  || ||||||||||| || |||||||| ||||||
Sbjct: 1305 tcatcgtcgtatacacgagccctcaacgctccgaaaaagtcgatagattgtccagggaag 1246

                      
Query: 540  gtgtcgacga 549
            | ||| ||||
Sbjct: 1245 gcgtcaacga 1236



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>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                        
Query: 573  acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 632
            |||||||| |||  ||| ||||||||||||||||| |||||||| || | ||| ||||||
Sbjct: 1043 acattgtcagtcctgaaaatacccttgcagacaccaatacggtcttccctggtaggagcc 984

                                                        
Query: 633  cagtagaacttctccatacgaccatcacggatcagaggagcgta 676
            |||||||| || |||||||||||||||||||| |||||||||||
Sbjct: 983  cagtagaatttttccatacgaccatcacggataagaggagcgta 940



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 261  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 310
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306



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>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 572 gacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagc 631
           ||||||||| |||  |||||||||  |||| ||||| |||||||| ||||| ||||| ||
Sbjct: 248 gacattgtcagtcctgaagataccagtgcaaacaccaatacggtcctcacgagtgggtgc 189

                                                     
Query: 632 ccagtagaacttctccatacgaccatcacggatcagaggagc 673
           ||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 188 ccagtagaatttctccatacgaccatcacggatgagaggagc 147



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>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 119 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                              
Query: 179 ggcattttggtcggtgcaaccttccggcacgggca 213
           ||||    ||||||  |||||||||||||| ||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcacaggca 41



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>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  101 bits (51), Expect = 3e-18
 Identities = 72/79 (91%)
 Strand = Plus / Minus

                                                                        
Query: 598  tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 657
            ||||||| || ||||| || || ||||||||||||||||||||||||||||||||||| |
Sbjct: 1034 tgcagactccaatacgatcttcgcgggtgggagcccagtagaacttctccatacgaccgt 975

                               
Query: 658  cacggatcagaggagcgta 676
            ||||||| |||||||||||
Sbjct: 974  cacggatgagaggagcgta 956



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 269  gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 328
            |||||||||||| ||||| |||| ||||| |||  | ||||| |  || || | ||| ||
Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304

                                                                        
Query: 329  attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 388
            ||| || ||||| ||||| |||||||  |||||||| || ||||| ||||  ||||||||
Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244

                        
Query: 389  tggctgctcgaa 400
             |||||||||||
Sbjct: 1243 cggctgctcgaa 1232



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                        
Query: 467  ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 526
            |||||| | ||| ||||||||||| |||| ||| | ||  ||||| || || ||||| ||
Sbjct: 1165 ccacttcctcacttcatcgtcgtaaaccctagccctcaaggcaccaaagaaatcaataga 1106

                              
Query: 527  ttgtcctgggaaggtgtc 544
            ||| ||||||||||||||
Sbjct: 1105 ttggcctgggaaggtgtc 1088



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>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 161/198 (81%)
 Strand = Plus / Minus

                                                                       
Query: 476 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 535
           ||||||||| ||||| || || || | ||||||||| || |||||||| |||||||| ||
Sbjct: 462 cacctcatcatcgtatactcgtgccctcagagcaccaaagaagtcaatagattgtccagg 403

                                                                       
Query: 536 gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 595
           |||||| ||||| ||||| || ||||  || |||   || |||||||||  ||| |||||
Sbjct: 402 gaaggtatcgacaatctttacaacagcttcctcaggcacgttgtcggtcctgaaaatacc 343

                                                                       
Query: 596 cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 655
           |||||| ||||| || |  || || |  || || ||||| ||||||||||||||||||||
Sbjct: 342 cttgcaaacaccaattctatcttccctagttggtgcccaatagaacttctccatacgacc 283

                             
Query: 656 atcacggatcagaggagc 673
           ||||||||| ||||||||
Sbjct: 282 atcacggataagaggagc 265



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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 142/173 (82%)
 Strand = Plus / Minus

                                                                       
Query: 477 acctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctggg 536
           ||||| |||||||| ||||| |||||||| || ||||| ||||| ||||| || || |||
Sbjct: 683 acctcgtcgtcgtagacccgggcacgcagcgcgccgaagaagtcgatggactggccaggg 624

                                                                       
Query: 537 aaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagataccc 596
           ||||||||||| | || ||||||   ||| ||   |||   ||||||  ||||||| |||
Sbjct: 623 aaggtgtcgaccagctggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgccc 564

                                                                
Query: 597 ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 649
           |||||||| ||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 563 ttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccat 511



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 241 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 300
           ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860

                                                                       
Query: 301 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 360
           |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800

                                                   
Query: 361 actctagcagcttctcgactgtcatctttggctgctcgaa 400
           |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760



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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 241  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 300
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 301  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 360
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 361  actctagcagcttctcgactgtcatctttggctgctcgaa 400
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Minus

                                                                        
Query: 477  acctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctggg 536
            ||||| |||||||| ||||| |||||||| || ||||| || || ||||| || || |||
Sbjct: 1078 acctcgtcgtcgtagacccgggcacgcagcgcgccgaagaaatcgatggactggccaggg 1019

                                                                        
Query: 537  aaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagataccc 596
            ||||||||||| | || ||||||   ||| ||   |||   ||||||  ||||||| |||
Sbjct: 1018 aaggtgtcgaccagctggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgccc 959

                                                                 
Query: 597  ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 649
            |||||||| ||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 958  ttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccat 906



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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 241  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 300
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 301  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 360
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 361  actctagcagcttctcgactgtcatctttggctgctcgaa 400
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| ||||||||||| ||||| ||||| || |||||||| ||||||||||||||||
Sbjct: 969 ggaagatgcccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 910

               
Query: 646 ccat 649
           ||||
Sbjct: 909 ccat 906



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>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                       
Query: 587 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
           |||||||||  |||||||||| || ||||| || | |||||| ||||||||||| |||||
Sbjct: 872 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 813

                                         
Query: 647 catacgaccatcacggatcagaggagcgta 676
           ||||||||||||||| || |||||||||||
Sbjct: 812 catacgaccatcacgaatgagaggagcgta 783



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>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                        
Query: 587  gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 646
            |||||||||  |||||||||| || ||||| || | |||||| ||||||||||| |||||
Sbjct: 1045 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 986

                                          
Query: 647  catacgaccatcacggatcagaggagcgta 676
            ||||||||||||||| || |||||||||||
Sbjct: 985  catacgaccatcacgaatgagaggagcgta 956



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>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 598 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 657
           |||||||||| ||||| || || |  || |||||||||||||||||||||||||||||||
Sbjct: 456 tgcagacaccaatacgatcttctctagtaggagcccagtagaacttctccatacgaccat 397

                           
Query: 658 cacggatcagaggagc 673
           ||||||| ||||||||
Sbjct: 396 cacggatgagaggagc 381



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 465 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 524
           |||||||| | ||| ||||| |||||||| | ||| | ||  |||||||| || || |||
Sbjct: 589 acccacttcctcacttcatcatcgtacactctagccctcaatgcaccgaagaaatcgatg 530

                                           
Query: 525 gattgtcctgggaaggtgtcgacgatcttgac 556
           ||||| || ||||||||||| || ||||||||
Sbjct: 529 gattggccagggaaggtgtcaacaatcttgac 498



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>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 598 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 657
           |||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||||||||||
Sbjct: 143 tgcagacaccaatacgatcgtcgcgggttggtgcccagtagaatttctccatacgaccat 84

                           
Query: 658 cacggatcagaggagc 673
           ||||||| || |||||
Sbjct: 83  cacggataaggggagc 68



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>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 136/167 (81%)
 Strand = Plus / Minus

                                                                       
Query: 483 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 542
           |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| |
Sbjct: 618 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 559

                                                                       
Query: 543 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 602
           ||||||| || ||||||   ||||||   |||   ||||||  ||||||| |||||||| 
Sbjct: 558 tcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgcac 499

                                                          
Query: 603 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 649
           || ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 498 acgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccat 452



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>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                        
Query: 579  tcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtag 638
            |||||| |||| || |||||||| ||||| || ||||| || |  || || |||||||||
Sbjct: 1042 tcggtccggaaaattcccttgcaaacaccaatgcggtcttcccttgttggtgcccagtag 983

                                               
Query: 639  aacttctccatacgaccatcacggatcagaggagc 673
            |||||||||||||||||||||||||| ||||||||
Sbjct: 982  aacttctccatacgaccatcacggatgagaggagc 948



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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                        
Query: 597  ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacca 656
            ||||||||||| |||||||| || | |||||| ||||||||||| ||||||||||| |||
Sbjct: 1019 ttgcagacaccaatacggtcctccctggtgggtgcccagtagaatttctccatacggcca 960

                          
Query: 657  tcacggatcagagg 670
            |||||||| |||||
Sbjct: 959  tcacggataagagg 946



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 270  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 329
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 330  ttgtcctgctcctggacgagcatg 353
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263



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>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
            (pJQ4)
          Length = 1655

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 159/198 (80%)
 Strand = Plus / Minus

                                                                        
Query: 476  cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 535
            ||||||||| ||||| || || || | ||||||||| || |||||||| |||||||| ||
Sbjct: 1106 cacctcatcatcgtatactcgtgccctcagagcaccaaagaagtcaatagattgtccagg 1047

                                                                        
Query: 536  gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 595
            |||||| ||||| ||||| |  || |  || |||   || |||||||||  ||| |||||
Sbjct: 1046 gaaggtatcgacaatctttataacggcttcctcaggcacgttgtcggtcctgaaaatacc 987

                                                                        
Query: 596  cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 655
            |||||| ||||| || |  || || |  || || ||||| ||||||||||||||||||||
Sbjct: 986  cttgcaaacaccaattctatcttccctagttggtgcccaatagaacttctccatacgacc 927

                              
Query: 656  atcacggatcagaggagc 673
            ||||||||| ||||||||
Sbjct: 926  atcacggataagaggagc 909



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>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 82/96 (85%)
 Strand = Plus / Minus

                                                                       
Query: 578 gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 637
           |||||||  ||| ||||| ||||| ||||||||||||||||| |  || || ||||||||
Sbjct: 853 gtcggtcctgaaaatacctttgcaaacaccgatacggtcgtccctagttggtgcccagta 794

                                               
Query: 638 gaacttctccatacgaccatcacggatcagaggagc 673
            || |||||||||||||| |||||||| ||||||||
Sbjct: 793 aaatttctccatacgaccgtcacggatgagaggagc 758



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 486 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 545
           ||||| |||||||| | ||  |||||||| || || |||||||| || ||||||||||||
Sbjct: 945 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 886

               
Query: 546 acga 549
           ||||
Sbjct: 885 acga 882



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>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 258 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 317
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 318 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 373
           || | ||| |||||||||||||||||||| |||||||  || ||||||||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3



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>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                       
Query: 630 gcccagtagaacttctccatacgaccatcacggatcagaggagc 673
           ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 963 gcccagtagaacttctccatacgaccatcacggataagaggagc 920



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>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470

                              
Query: 646 ccatacgaccatcacggat 664
           |||| || || ||||||||
Sbjct: 469 ccatgcgcccgtcacggat 451



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>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                              
Query: 646 ccatacgaccatcacggat 664
           |||| || || ||||||||
Sbjct: 471 ccatgcgcccgtcacggat 453



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>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476

                              
Query: 646 ccatacgaccatcacggat 664
           |||| || || ||||||||
Sbjct: 475 ccatgcgcccgtcacggat 457



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>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                              
Query: 646 ccatacgaccatcacggat 664
           |||| || || ||||||||
Sbjct: 471 ccatgcgcccgtcacggat 453



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>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 135/167 (80%)
 Strand = Plus / Minus

                                                                       
Query: 483 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 542
           |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| |
Sbjct: 626 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 567

                                                                       
Query: 543 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 602
           ||||||| || ||||||   ||||||   |||   ||||||  ||||||| |||||||| 
Sbjct: 566 tcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgcac 507

                                                          
Query: 603 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 649
           || ||||| ||||| || |||||||| |||||||||||||| |||||
Sbjct: 506 acgccgatgcggtcctcccgggtgggcgcccagtagaacttgtccat 460



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>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                              
Query: 646 ccatacgaccatcacggat 664
           |||| || || ||||||||
Sbjct: 471 ccatgcgcccgtcacggat 453



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>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                              
Query: 646 ccatacgaccatcacggat 664
           |||| || || ||||||||
Sbjct: 471 ccatgcgcccgtcacggat 453



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>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

                              
Query: 646 ccatacgaccatcacggat 664
           |||| || || ||||||||
Sbjct: 471 ccatgcgcccgtcacggat 453



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>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474

                              
Query: 646 ccatacgaccatcacggat 664
           |||| || || ||||||||
Sbjct: 473 ccatgcgcccgtcacggat 455



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 119     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 179     ggcattttggtcggtgcaaccttccggcacgggca 213
               ||||    |||||||||||||||||||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319



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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 119   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 178
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 179   ggcattttggtcggtgcaaccttccggcacgggca 213
             ||||    |||||||||||||||||||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693



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>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                       
Query: 578 gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 637
           |||||||  ||| ||||| ||||| ||||||| ||||||||| |  || || ||||||||
Sbjct: 852 gtcggtcctgaaaatacctttgcaaacaccgacacggtcgtccctagttggtgcccagta 793

                                               
Query: 638 gaacttctccatacgaccatcacggatcagaggagc 673
            || |||||||||||||| |||||||| ||||||||
Sbjct: 792 aaatttctccatacgaccgtcacggatgagaggagc 757



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 486 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 545
           ||||| |||||||| | ||  |||||||| || || |||||||| || ||||||||||||
Sbjct: 944 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 885

               
Query: 546 acga 549
           ||||
Sbjct: 884 acga 881



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>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 630 gcccagtagaacttctccatacgaccatcacggatcagaggagc 673
           ||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 222 gcccagtagaacttctccatacgaccatcacggataagtggagc 179



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 507 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 556
           |||||||||||||| || |||||||| |||||| | || || ||||||||
Sbjct: 345 gcaccgaaaaagtcgatagattgtccagggaagttatcaacaatcttgac 296



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>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474

               
Query: 646 ccat 649
           ||||
Sbjct: 473 ccat 470



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>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

               
Query: 646 ccat 649
           ||||
Sbjct: 471 ccat 468



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>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470

               
Query: 646 ccat 649
           ||||
Sbjct: 469 ccat 466



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>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470

               
Query: 646 ccat 649
           ||||
Sbjct: 469 ccat 466



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>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472

               
Query: 646 ccat 649
           ||||
Sbjct: 471 ccat 468



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>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 586 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 645
           ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| |
Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476

               
Query: 646 ccat 649
           ||||
Sbjct: 475 ccat 472



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>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 630 gcccagtagaacttctccatacgaccatcacggatcagaggagc 673
           ||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 982 gcccagtagaacttctccatacgaccatcacggataagtggagc 939



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>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                      
Query: 503  cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtc 544
            ||||||||||||||||||||||||||| || |||||||||||
Sbjct: 1113 cagagcaccgaaaaagtcaatggattggcccgggaaggtgtc 1072



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 573  acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 632
            ||||||||||||  ||| |||||  |||| |||||||| |  || || | |||||| |||
Sbjct: 1043 acattgtcggtcctgaaaatacctgtgcaaacaccgatcctatcttccctggtgggtgcc 984

                                            
Query: 633  cagtagaacttctccatacgaccatcacggat 664
            ||||| ||||||||||||||||| ||||||||
Sbjct: 983  cagtaaaacttctccatacgaccgtcacggat 952



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>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                    
Query: 630 gcccagtagaacttctccatacgaccatcacggatcagagg 670
           ||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 999 gcccagtagaatttctccatacgaccatcacggataagagg 959



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 503  cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 556
            |||||||||||| || ||||| |||||||| |||||| | ||||||||||||||
Sbjct: 1126 cagagcaccgaagaaatcaatagattgtccagggaagctatcgacgatcttgac 1073



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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                        
Query: 584  ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 643
            ||||||||| ||| ||||||| ||||| ||||| |||||||||||   ||||||| ||||
Sbjct: 1861 ctggaagattcccatgcagacgccgatgcggtcctcacgggtggggttccagtagtactt 1802

                                 
Query: 644  ctccatacgaccatcacggat 664
            |||||| || || ||||||||
Sbjct: 1801 ctccatgcggccgtcacggat 1781



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 312  agctgcacacgcttgacattgtcctgctc 340
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105



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>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 630 gcccagtagaacttctccatacgaccatcacggatcagaggagc 673
           ||||||||||||||||||||||| |||||||| || ||||||||
Sbjct: 995 gcccagtagaacttctccatacgcccatcacgaatgagaggagc 952



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>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 627 ggagcccagtagaacttctccatacgaccatcacggatcagaggagc 673
           ||||||||||||||||| |||||||||||||| ||||| || |||||
Sbjct: 419 ggagcccagtagaacttttccatacgaccatcgcggataaggggagc 373



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>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 483  tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 542
            ||||||||||| || |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 2723 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 2664

              
Query: 543  tc 544
            ||
Sbjct: 2663 tc 2662



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>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 483  tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 542
            ||||||||||| || |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 1033 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 974

              
Query: 543  tc 544
            ||
Sbjct: 973  tc 972



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>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/79 (86%), Gaps = 4/79 (5%)
 Strand = Plus / Minus

                                                                        
Query: 600  cagacaccgatacggtcgtcacgggtgggagcccagt--agaacttctccatacgaccat 657
            ||||||||||||||||| |||||||| ||   |||||  |||||||||||||||| ||||
Sbjct: 1016 cagacaccgatacggtcttcacgggtcggg--ccagtcaagaacttctccatacgtccat 959

                               
Query: 658  cacggatcagaggagcgta 676
            || |||| |||||| ||||
Sbjct: 958  caaggatgagaggaccgta 940



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>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 632 ccagtagaacttctccatacgaccatcacggatca 666
           ||||||||||||||||||||| |||||||| ||||
Sbjct: 678 ccagtagaacttctccatacgcccatcacgaatca 644



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>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 466  cccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgg 525
            ||||||| | ||| |||||||| || || ||||| | || |||||| || ||||| || |
Sbjct: 1161 cccactttctcacttcatcgtcataaactcgagctctcaaagcaccaaagaagtctattg 1102

                                  
Query: 526  attgtcctgggaaggtgtcgac 547
            | ||||||||||||||||||||
Sbjct: 1101 actgtcctgggaaggtgtcgac 1080



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 609  atacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatcacggatcaga 668
            ||||| || ||||| || |||||||||||||| || ||||| ||||||||||| || |||
Sbjct: 1018 atacgatcttcacgagttggagcccagtagaatttatccatccgaccatcacgaatgaga 959

              
Query: 669  gg 670
            ||
Sbjct: 958  gg 957



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>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 630    gcccagtagaacttctccatacgaccatcacggatcagaggagc 673
              ||||| ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 103825 gcccaatagaatttctccatacgaccgtcacgaataagaggagc 103868



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>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 630   gcccagtagaacttctccatacgaccatcacggatcagaggagc 673
             ||||| ||||| |||||||||||||| ||||| || ||||||||
Sbjct: 82850 gcccaatagaatttctccatacgaccgtcacgaataagaggagc 82893



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>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 615  tcgtcacgggtgggagcccagtagaacttctccatacgaccatcacg 661
            |||||||| || || ||||||||||| || |||||||| ||||||||
Sbjct: 6892 tcgtcacgagtaggtgcccagtagaatttttccatacgtccatcacg 6938



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>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 632 ccagtagaacttctccatacgaccatcacggatcagaggagc 673
           |||||||||||||||||| |  || ||||||||||| |||||
Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagc 929



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>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 632 ccagtagaacttctccatacgaccatcacggatcagaggagc 673
           |||||||||||||||||| |  || ||||||||||| |||||
Sbjct: 936 ccagtagaacttctccattcttccttcacggatcagtggagc 895



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>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 632 ccagtagaacttctccatacgaccatcacggatcagaggagc 673
           |||||||||||||||||| |  || ||||||||||| |||||
Sbjct: 970 ccagtagaacttctccattcttccttcacggatcagtggagc 929



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>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 632 ccagtagaacttctccatacgaccatcacggatcagaggagc 673
           |||||||||||||||||| |  || ||||||||||| |||||
Sbjct: 998 ccagtagaacttctccattcttccttcacggatcagtggagc 957



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>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 632 ccagtagaacttctccatacgaccatcacggatcagaggagc 673
           |||||||||||||||||| |  || ||||||||||| |||||
Sbjct: 944 ccagtagaacttctccattcttccttcacggatcagtggagc 903



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>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 274   catcacccagagctgcctggct 295
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254



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>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 632 ccagtagaacttctccatacgaccatcacggatcagaggagc 673
           |||||||||||||||||| |  || ||||||||||| |||||
Sbjct: 957 ccagtagaacttctccattcttccttcacggatcagtggagc 916



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>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 632   ccagtagaacttctccatacgaccatcacggatcagaggagc 673
             |||||||||||||||||| |  || ||||||||||| |||||
Sbjct: 97615 ccagtagaacttctccattcttccttcacggatcagtggagc 97656



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>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    aatatatttagagatatattaa 45
             ||||||||||||||||||||||
Sbjct: 67942 aatatatttagagatatattaa 67963



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>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence
          Length = 177245

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    tatatttagagatatattaac 46
             |||||||||||||||||||||
Sbjct: 12315 tatatttagagatatattaac 12335



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>gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166149

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 19    atactaatatatttagagatatatt 43
             |||| ||||||||||||||||||||
Sbjct: 30449 atacaaatatatttagagatatatt 30473



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>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 534  gggaaggtgtcgacgatcttg 554
            |||||||||||||||||||||
Sbjct: 3653 gggaaggtgtcgacgatcttg 3673



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>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains
             part of a novel gene, complete sequence
          Length = 150986

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    tactaatatatttagagatat 40
             |||||||||||||||||||||
Sbjct: 20639 tactaatatatttagagatat 20659



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>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence
          Length = 98660

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    tatatttagagatatattaac 46
             |||||||||||||||||||||
Sbjct: 66387 tatatttagagatatattaac 66367



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 95      aaacatcagatattaaaagtg 115
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420



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>gb|AF532116.1| Mus musculus strain 129/SvJ BAC clone citb585c7 from the MHC region,
              complete sequence
          Length = 192871

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     tactaatatatttagagatat 40
              |||||||||||||||||||||
Sbjct: 183825 tactaatatatttagagatat 183845



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>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
             complete sequence
          Length = 174701

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 19    atactaatatatttagagatatatt 43
             |||| ||||||||||||||||||||
Sbjct: 62509 atacaaatatatttagagatatatt 62485



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 95      aaacatcagatattaaaagtg 115
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365



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>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 95     aaacatcagatattaaaagtg 115
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423



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>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence
          Length = 105452

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 26   tatatttagagatatattaac 46
            |||||||||||||||||||||
Sbjct: 6217 tatatttagagatatattaac 6197



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>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 584   ctggaagatacccttgcagacacc 607
             ||||| ||||||||||||||||||
Sbjct: 67288 ctggatgatacccttgcagacacc 67265



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>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 274  catcacccagagctgcctggctca 297
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565



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>ref|XM_765396.1| Giardia lamblia ATCC 50803 heat shock protein (hsp70) partial mRNA
          Length = 3732

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    ggtctttgccaatgggtata 21
            ||||||||||||||||||||
Sbjct: 2247 ggtctttgccaatgggtata 2266



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>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 305 gtcagcaagctgcacacgct 324
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223



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>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 552 ttgacgacagactcgtcact 571
           ||||||||||||||||||||
Sbjct: 289 ttgacgacagactcgtcact 308



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>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tcagatattaaaagtggcat 119
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077



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>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tcagatattaaaagtggcat 119
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583



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>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   tcagatattaaaagtggcat 119
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911



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>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 274  catcacccagagctgcctggctca 297
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619



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>emb|AL049563.4|HS68D15 Human DNA sequence from clone RP1-68D15 on chromosome X Contains the
            3' end of a novel gene (FLJ23018) and the 3' end of the
            TRPC5 gene for transient receptor potential cation
            channel subfamily C member 5, complete sequence
          Length = 113028

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   actaatatatttagagatat 40
            ||||||||||||||||||||
Sbjct: 7687 actaatatatttagagatat 7706



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>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    ttgacattgtcctgctcctg 343
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419



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>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 274  catcacccagagctgcctggctca 297
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935



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>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 128  ggtgtaaaggcagctgccgtcgtcgctc 155
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133



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>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    aaacatgcccagcaatcgcttgga 71
             |||||||||||||||||| |||||
Sbjct: 41692 aaacatgcccagcaatcgattgga 41715



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>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 274  catcacccagagctgcctggctca 297
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659



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>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 274  catcacccagagctgcctggctca 297
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026



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>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 274  catcacccagagctgcctggctca 297
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935



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>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   tggcatgcttaaaaggtgta 133
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 603     acaccgatacggtcgtcacg 622
               ||||||||||||||||||||
Sbjct: 3056308 acaccgatacggtcgtcacg 3056327



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>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    ttgacattgtcctgctcctg 343
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979



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>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 632 ccagtagaacttctccatacgaccatcacggatcag 667
           |||||||||||||||||| |  || |||||||||||
Sbjct: 208 ccagtagaacttctccattcttccttcacggatcag 173



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>gb|AC093634.3| Homo sapiens BAC clone RP11-168E14 from 4, complete sequence
          Length = 82529

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 18   tatactaatatatttagagatatattaa 45
            |||| ||||||||||||| |||||||||
Sbjct: 9678 tatattaatatatttagaaatatattaa 9705



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>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 274  catcacccagagctgcctggctca 297
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619



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>emb|BX548013.3| Mouse DNA sequence from clone RP23-452C18 on chromosome X, complete
             sequence
          Length = 14756

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    taatatatttagagatatat 42
             ||||||||||||||||||||
Sbjct: 10253 taatatatttagagatatat 10234



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>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 99     atcagatattaaaagtggcatgct 122
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,423,907
Number of Sequences: 3902068
Number of extensions: 4423907
Number of successful extensions: 81449
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80924
Number of HSP's gapped (non-prelim): 464
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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