>LU_HUMAN (P50895) Lutheran blood group glycoprotein precursor (B-CAM cell|
           surface glycoprotein) (Auberger B antigen) (F8/G253
           antigen)
          Length = 628

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 494 RPKQAHALPPPVHQGLRRAGSQHPEGRGRHLGGVQGDVK 378
           R ++    PPP   GL  +GS+ PE  G  +GG  G  +
Sbjct: 580 RQRREKGAPPPGEPGLSHSGSEQPEQTGLLMGGASGGAR 618

>PACN2_RAT (Q9QY17) Protein kinase C and casein kinase substrate in neurons 2|
           protein (Synaptic dynamin-associated protein II)
           (Syndapin 2) (Syndapin-II) (SdpII)
          Length = 488

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
 Frame = -1

Query: 466 HLSTKVS-----GEQARNIQKE--EEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDR 308
           HL  K S      E+ +N QKE   + +  GFKET +  D   K +KP  + +++K +D 
Sbjct: 97  HLEVKASLMNEDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKP--WAKKLKEVDA 154

Query: 307 AVKA 296
           A KA
Sbjct: 155 AKKA 158

>IF39_HUMAN (P55884) Eukaryotic translation initiation factor 3 subunit 9|
           (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1
           homolog) (hPrt1)
          Length = 814

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -3

Query: 488 KQAHALPPPVHQGLRRAGSQHPEGRGRHLGGVQGDVKEVGPAPQKR 351
           +Q  A PPP    LR AG   PE  G      +  + E GP P+ R
Sbjct: 22  QQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPEPEVR 67

>RS5_METJA (P54045) 30S ribosomal protein S5P|
          Length = 217

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 416 RGRHLGGVQGDVKEVGPAPQKRETKCLSAAHEIYRPCGQGCGLWIFQADNCGCGS 252
           R  ++G  +G  KEVGPA +    K ++ A +      +GCG W      CGCG+
Sbjct: 80  RNGYVGVGKGKAKEVGPAIR----KAIAQAKKNIIRVKRGCGSW-----ECGCGT 125

>PACN1_HUMAN (Q9BY11) Protein kinase C and casein kinase substrate in neurons|
           protein 1
          Length = 444

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -1

Query: 442 EQARNIQKE--EEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDRAVKA 296
           E+ +N QK+   + I  GFKET +  D   K +KP  + ++MK ++ A KA
Sbjct: 111 EKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKP--WAKKMKELEAAKKA 159

>RKPI_RHIME (Q52938) Capsular polysaccharide biosynthesis protein rkpI|
          Length = 538

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +2

Query: 275 LERSIDHSLDRTVDRFHALLKDTWFLFFGELVQLL*RLLEPRPD 406
           LE+S D +L + +D  + L +  WF+F+G+   LL    +P PD
Sbjct: 449 LEQS-DAALKQLIDGLNKLDRPVWFVFYGDHAPLLKSFADPFPD 491

>PACN1_RAT (Q9Z0W5) Protein kinase C and casein kinase substrate in neurons|
           protein 1 (Synaptic, dynamin-associated protein I)
           (Syndapin 1) (Syndapin-I) (SdpI) (Dynamin proline-rich
           domain-interacting protein) (Dynamin PRD-interacting
           protein)
          Length = 441

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -1

Query: 442 EQARNIQKE--EEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDRAVKA 296
           E+ +N QK+   + I  GFKET +  D   K +KP  + ++MK ++ A KA
Sbjct: 108 EKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKP--WAKKMKELEAAKKA 156

>PACN1_MOUSE (Q61644) Protein kinase C and casein kinase substrate in neurons|
           protein 1
          Length = 441

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -1

Query: 442 EQARNIQKE--EEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDRAVKA 296
           E+ +N QK+   + I  GFKET +  D   K +KP  + ++MK ++ A KA
Sbjct: 108 EKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKP--WAKKMKELEAAKKA 156

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 27.7 bits (60), Expect(2) = 1.5
 Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
 Frame = -3

Query: 428 HPEGRGR---HLGGVQGDVKEVGPAPQKRETKCLSAAHEIYRPCGQGCG------LWIFQ 276
           +PEG  R    L G  G V E  P   +    C    H     CGQ C         + Q
Sbjct: 769 NPEGCTRCSCDLRGTLGGVAECQPGTGQ----CFCKPHV----CGQACASCKDGFFGLDQ 820

Query: 275 ADNCGCGSCYC 243
           AD  GC SC C
Sbjct: 821 ADYFGCRSCRC 831



 Score = 21.9 bits (45), Expect(2) = 1.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 489 QAGSCAPATCPPRSPA 442
           +AGSC PA   P  PA
Sbjct: 721 EAGSCHPAGLAPVDPA 736

>PACN2_MOUSE (Q9WVE8) Protein kinase C and casein kinase substrate in neurons|
           protein 2
          Length = 486

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
 Frame = -1

Query: 466 HLSTKVS-----GEQARNIQKE--EEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDR 308
           HL  K S      E+ +N QKE   + +  GFKET +  D   K +KP  + +++K ++ 
Sbjct: 97  HLEVKASLMNEDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKP--WAKKLKEVEA 154

Query: 307 AVKA 296
           A KA
Sbjct: 155 AKKA 158

>PACN2_HUMAN (Q9UNF0) Protein kinase C and casein kinase substrate in neurons|
           protein 2
          Length = 486

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
 Frame = -1

Query: 466 HLSTKVS-----GEQARNIQKE--EEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDR 308
           HL  K S      E+ +N QKE   + +  GFKET +  D   K +KP  + +++K ++ 
Sbjct: 97  HLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKP--WAKKLKEVEA 154

Query: 307 AVKA 296
           A KA
Sbjct: 155 AKKA 158

>Y068_MYCPN (P75048) Hypothetical protein MG055 homolog (D09_orf125)|
          Length = 125

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = -1

Query: 469 RHLSTKVSGEQARNIQKEEEDIWAGFKETLKKLDQLPKKEKP--SVFQQRMKSIDRAVKA 296
           R L  K+  ++A    KE++D  +  K+T KK+DQ PK + P    F      ID+ V  
Sbjct: 29  RQLKAKIEAKKA----KEKQD--SKTKDTDKKVDQTPKVKVPFTKKFSNLWFGIDKEVNK 82

Query: 295 VVYGSFKLTIVV 260
           +V+ + K  I +
Sbjct: 83  IVWVTSKKLITI 94

>Y002_NPVAC (P24655) Hypothetical 37.8 kDa protein in PTP-CTL intergenic region|
           (ORF2)
          Length = 328

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = -1

Query: 439 QARNIQKEEEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDRAVKAVVYGSFK 275
           Q   +  +   ++ GF+ET++K D++ +K+   V     K +D + +AV Y + K
Sbjct: 192 QVTRVMTDLNRMYTGFQETMQKKDEIMQKKDAQVTDLVAKVVDLSDRAVQYPADK 246

>PACN2_CHICK (O13154) Protein kinase C and casein kinase substrate in neurons|
           protein 2 (Focal adhesion protein of 52 kDa) (FAP52)
          Length = 448

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -1

Query: 442 EQARNIQKE--EEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDRAVKA 296
           E+ +N QKE   + +  GFKET +  D   K +KP  + +++K ++ A KA
Sbjct: 110 EKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKP--WAKKLKEVEAAKKA 158

>HAND1_SHEEP (Q28555) Heart- and neural crest derivatives-expressed protein 1|
           (Extraembryonic tissues, heart, autonomic nervous system
           and neural crest derivatives-expressed protein 1)
           (eHAND)
          Length = 204

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
 Frame = -3

Query: 470 PPPVHQGLRRAGSQHPE-------GRGRHLGGVQGDVKEVGPAPQKRETKCLSAAHEIYR 312
           PPP       A S  P+       GR   LGG  G  K  GP  ++R T+ +++A    R
Sbjct: 65  PPPTTAVRAAAASYGPDARPGQSPGRLEALGGRLGRRKGSGPKKERRRTESINSAFAELR 124

Query: 311 PC 306
            C
Sbjct: 125 EC 126

>STC2_STAAU (P17855) Staphylocoagulase precursor|
          Length = 715

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -3

Query: 470 PPPVHQGLRRAGSQ---HPEGRGRHLGGVQGDVKEVGPAPQKRET 345
           P P+ +GL  + S+    P+G    L G+QG+  ++   PQ  ET
Sbjct: 411 PNPILEGLEGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQATET 455

>TIF1B_MOUSE (Q62318) Transcription intermediary factor 1-beta (TIF1-beta)|
           (Tripartite motif protein 28) (KRAB-A-interacting
           protein) (KRIP-1)
          Length = 834

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -3

Query: 203 TKENQ*RQYGEMRTKDGRPACFM-FNYHDPTIFFCFTCFVFPSYGNKYLRCPLLQLHVHP 27
           TK++  R  G  +T+DG    +   + H+P + FC +C          L C   QL+ H 
Sbjct: 188 TKDHTVRSTGPAKTRDGERTVYCNVHKHEPLVLFCESC--------DTLTCRDCQLNAHK 239

Query: 26  XTQ 18
             Q
Sbjct: 240 DHQ 242

>STC1_STAAU (P07767) Staphylocoagulase precursor|
          Length = 658

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -3

Query: 470 PPPVHQGLRRAGSQ---HPEGRGRHLGGVQGDVKEVGPAPQKRET 345
           P P+ +GL  + S+    P+G    L G+QG+  ++   PQ  ET
Sbjct: 408 PNPILEGLEGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQATET 452

>RHG25_HUMAN (P42331) Rho-GTPase-activating protein 25|
          Length = 638

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 12/46 (26%), Positives = 30/46 (65%)
 Frame = -1

Query: 442 EQARNIQKEEEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDRA 305
           EQ +N++KE  D+WA      ++L++  +K+K +  +  +++++R+
Sbjct: 566 EQIKNLEKENYDVWAKVVRLNEELEK--EKKKSAALEISLRNMERS 609

>SC5A1_HUMAN (P13866) Sodium/glucose cotransporter 1 (Na(+)/glucose|
           cotransporter 1) (High affinity sodium-glucose
           cotransporter)
          Length = 664

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = -1

Query: 460 STKVSGEQARNIQKEEEDIWAGFKETLKKLDQLPKKEK 347
           S + S E+  ++  EEE+I  G KET++   Q+P+K+K
Sbjct: 562 SLRNSKEERIDLDAEEENIQEGPKETIEIETQVPEKKK 599

>RS5_METVA (P14036) 30S ribosomal protein S5P|
          Length = 225

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -3

Query: 407 HLGGVQGDVKEVGPAPQKRETKCLSAAHEIYRPCGQGCGLWIFQADNCGCGS 252
           ++G   G  KEVGPA +    K ++ A         GCG W      CGCGS
Sbjct: 91  YVGVGMGKSKEVGPAIR----KAIAQAKLSLIKVRVGCGSW-----ECGCGS 133

>FZD8_MOUSE (Q61091) Frizzled 8 precursor (Frizzled-8) (Fz-8) (mFz8)|
          Length = 685

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
 Frame = -3

Query: 500 PARPKQAHALPPPVHQGLRRAGSQHPEG-RGRHLGGVQGDVKEVGPAPQKRETKCLSAAH 324
           P+ P++    PPP  Q    +G   P G R  H GG      +   AP  R  K      
Sbjct: 161 PSPPRRLPPPPPPGEQPPSGSGHSRPPGARPPHRGGSSRGSGDAAAAPPSRGGKARPPGG 220

Query: 323 EIYRPCGQGC 294
               PC  GC
Sbjct: 221 GA-APCEPGC 229

>PACN2_XENLA (Q9DDA9) Protein kinase C and casein kinase substrate in neurons|
           protein 2 (x-PACSIN2)
          Length = 477

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -1

Query: 442 EQARNIQKE--EEDIWAGFKETLKKLDQLPKKEKPSVFQQRMKSIDRAVKA 296
           E+ +N QKE   + +  GFKET +  D   K +KP  + +++K ++ A K+
Sbjct: 110 EKIKNWQKEAFHKQMMGGFKETKEADDGFRKAQKP--WAKKLKEVEAAKKS 158

>MEGF6_MOUSE (Q80V70) Multiple epidermal growth factor-like domains 6 (EGF-like|
           domain-containing protein 3) (Multiple EGF-like domain
           protein 3) (Fragment)
          Length = 656

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 1   CKLXCNCVXGWTCSWRRGHLR 63
           C+L C+C+ G TC    GH R
Sbjct: 171 CRLNCSCLNGGTCDRLTGHCR 191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,675,327
Number of Sequences: 219361
Number of extensions: 1689871
Number of successful extensions: 5871
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5867
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)