ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC004816.1|AC004816 Homo sapiens PAC clone RP6-65G23 from 14q... 44 0.44
2emb|AL445595.6|HS594J14 Homo sapiens chromosome 9 BAC RP11-594J1... 44 0.44
3gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome... 42 1.7
4gb|AC122775.15| Mus musculus chromosome 5, clone RP24-191K3, com... 42 1.7
5gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, com... 42 1.7
6gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome ... 42 1.7
7gb|AF461135.1| Mus musculus angiomotin mRNA, complete cds 42 1.7
8gb|AC026882.6| Homo sapiens chromosome 3 clone RP11-211K13 map 3... 42 1.7
9gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, comp... 42 1.7
10gb|AC139451.7| Homo sapiens 3 BAC RP13-1056D16 (Roswell Park Can... 42 1.7
11gb|AC141000.7| Homo sapiens 3 BAC RP11-480C15 (Roswell Park Canc... 42 1.7
12gb|BC057638.1| Mus musculus angiomotin, mRNA (cDNA clone MGC:677... 42 1.7
13dbj|AK129277.1| Mus musculus mRNA for mKIAA1071 protein 42 1.7
14ref|NM_153319.1| Mus musculus angiomotin (Amot), mRNA 42 1.7
15emb|AL807753.10| Mouse DNA sequence from clone RP23-359L15 on ch... 42 1.7
16gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, comp... 40 6.8
17gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 6.8
18ref|NM_195012.1| Oryza sativa (japonica cultivar-group) putative... 40 6.8
19ref|XM_590055.2| PREDICTED: Bos taurus similar to forkhead-assoc... 40 6.8
20gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosom... 40 6.8
21gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.8
22gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete se... 40 6.8
23emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in... 40 6.8
24gb|AC110803.5| Homo sapiens BAC clone RP11-724G23 from 4, comple... 40 6.8
25gb|AC160989.2| Mus musculus BAC clone RP23-194N9 from chromosome... 40 6.8
26gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete seq... 40 6.8
27gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete ... 40 6.8
28emb|CR854849.7| Human DNA sequence from clone RP13-79M23 on chro... 40 6.8
29emb|BX470067.4| Human DNA sequence from clone WI2-84067D5 on chr... 40 6.8
30emb|AL603890.14| Human DNA sequence from clone RP11-584P2 on chr... 40 6.8
31emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on ch... 40 6.8
32emb|AL355861.19| Human DNA sequence from clone RP11-567J24 on ch... 40 6.8
33emb|AL035603.11|HS179E13 Human DNA sequence from clone RP1-179E1... 40 6.8
34gb|AC158756.4| Mus musculus chromosome 5, clone RP24-151L11, com... 40 6.8
35emb|AL022101.1|HS845O24 Human DNA sequence from clone RP5-845O24... 40 6.8
36emb|BX248243.23| Zebrafish DNA sequence from clone CH211-225L7 i... 40 6.8
37gb|AC163658.2| Mus musculus BAC clone RP23-281B21 from chromosom... 40 6.8
38gb|AC124799.5| Homo sapiens chromosome 11, clone RP6-106F23, com... 40 6.8
39emb|CR854856.5| Human DNA sequence from clone RP13-299H21 on chr... 40 6.8
40emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chr... 40 6.8
41gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
42gb|AC104248.3| Homo sapiens chromosome 8, clone RP11-1084E5, com... 40 6.8
43gb|AE011801.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.8
44gb|AC079638.3| Genomic sequence for Mus musculus, clone RP23-274... 40 6.8
45gb|AC109632.4| Homo sapiens chromosome 8, clone RP11-46A19, comp... 40 6.8
46gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nippon... 40 6.8
47dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
48gb|AC011933.17| Homo sapiens chromosome 17, clone RP11-16C1, com... 40 6.8
49gb|AC013726.7| Homo sapiens BAC clone RP11-400N9 from 2, complet... 40 6.8
50gb|AF392841.1| Oryza sativa subsp. indica clone pg-8-5 NBS-LRR-l... 40 6.8
51gb|AC163632.3| Mus musculus BAC clone RP23-339H2 from chromosome... 40 6.8
52gb|AC005137.1|AC005137 Human Chromosome 11p14.3 PAC clone 6-106f... 40 6.8
53gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 6.8
54emb|CT009706.20| Mouse DNA sequence from clone RP23-131H17 on ch... 40 6.8
55gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
56gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosom... 40 6.8
57dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0... 40 6.8
58dbj|AP006865.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 6.8
59dbj|AP006685.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.8
60dbj|AP006677.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.8
61dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.8
62dbj|AP006114.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 6.8
63dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.8
64dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.8
65dbj|AP004945.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.8
66dbj|AP004944.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.8
67dbj|AP004927.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 6.8
68dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.8
69dbj|AP004577.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 6.8
70dbj|AP004533.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 6.8
71dbj|AP004478.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.8
72dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.8
73gb|AC154512.2| Mus musculus BAC clone RP24-70L20 from chromosome... 40 6.8
74gb|DQ298752.1| Homo sapiens peroxiredoxin 3 (PRDX3) gene, comple... 40 6.8
75emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chro... 40 6.8
76gb|AC093611.2| Homo sapiens chromosome 3 clone CTD-2059M21 map 3... 40 6.8
77dbj|AP004580.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.8 
>gb|AC004816.1|AC004816 Homo sapiens PAC clone RP6-65G23 from 14q24.3, complete sequence
          Length = 166200

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 333    tgaaagacacttggtttctctttttt 358
              ||||||||||||||||| ||||||||
Sbjct: 131942 tgaaagacacttggtttatctttttt 131967
to top
>emb|AL445595.6|HS594J14 Homo sapiens chromosome 9 BAC RP11-594J14, complete sequence
          Length = 161567

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 164   ttctcatttctccatattgtcttcac 189
             |||| |||||||||||||||||||||
Sbjct: 55232 ttctaatttctccatattgtcttcac 55207
to top
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence
          Length = 245594

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 411   tcctcttccttctggatgttg 431
             |||||||||||||||||||||
Sbjct: 80145 tcctcttccttctggatgttg 80165
to top
>gb|AC122775.15| Mus musculus chromosome 5, clone RP24-191K3, complete sequence
          Length = 158766

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 334    gaaagacacttggtttctctt 354
              |||||||||||||||||||||
Sbjct: 132023 gaaagacacttggtttctctt 132003
to top
>gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, complete sequence
          Length = 167372

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 334    gaaagacacttggtttctctt 354
              |||||||||||||||||||||
Sbjct: 163976 gaaagacacttggtttctctt 163996
to top
>gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome 5, complete sequence
          Length = 203321

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 411   tcctcttccttctggatgttg 431
             |||||||||||||||||||||
Sbjct: 14901 tcctcttccttctggatgttg 14921
to top
>gb|AF461135.1| Mus musculus angiomotin mRNA, complete cds
          Length = 2837

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 408  tcttcctcttccttctggatg 428
            |||||||||||||||||||||
Sbjct: 1539 tcttcctcttccttctggatg 1519
to top
>gb|AC026882.6| Homo sapiens chromosome 3 clone RP11-211K13 map 3p, complete sequence
          Length = 162422

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 226   ctccattgccagagaaagcag 246
             |||||||||||||||||||||
Sbjct: 84248 ctccattgccagagaaagcag 84228
to top
>gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, complete sequence
          Length = 167457

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 334    gaaagacacttggtttctctt 354
              |||||||||||||||||||||
Sbjct: 164061 gaaagacacttggtttctctt 164081
to top
>gb|AC139451.7| Homo sapiens 3 BAC RP13-1056D16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 119043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     ggtatttgtttccatatgatg 82
              |||||||||||||||||||||
Sbjct: 118422 ggtatttgtttccatatgatg 118402
to top
>gb|AC141000.7| Homo sapiens 3 BAC RP11-480C15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 175946

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 62     ggtatttgtttccatatgatg 82
              |||||||||||||||||||||
Sbjct: 167599 ggtatttgtttccatatgatg 167619
to top
>gb|BC057638.1| Mus musculus angiomotin, mRNA (cDNA clone MGC:67773 IMAGE:2631191),
            complete cds
          Length = 2405

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 408  tcttcctcttccttctggatg 428
            |||||||||||||||||||||
Sbjct: 1590 tcttcctcttccttctggatg 1570
to top
>dbj|AK129277.1| Mus musculus mRNA for mKIAA1071 protein
          Length = 5197

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 408 tcttcctcttccttctggatg 428
           |||||||||||||||||||||
Sbjct: 375 tcttcctcttccttctggatg 355
to top
>ref|NM_153319.1| Mus musculus angiomotin (Amot), mRNA
          Length = 2837

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 408  tcttcctcttccttctggatg 428
            |||||||||||||||||||||
Sbjct: 1539 tcttcctcttccttctggatg 1519
to top
>emb|AL807753.10| Mouse DNA sequence from clone RP23-359L15 on chromosome X, complete
             sequence
          Length = 189848

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 408   tcttcctcttccttctggatg 428
             |||||||||||||||||||||
Sbjct: 99569 tcttcctcttccttctggatg 99589
to top
>gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, complete sequence
          Length = 235928

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    ggcttctactccattgccag 237
              ||||||||||||||||||||
Sbjct: 235430 ggcttctactccattgccag 235411
to top
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    cttcctcttccttctggatg 428
              ||||||||||||||||||||
Sbjct: 267612 cttcctcttccttctggatg 267631
to top
>ref|NM_195012.1| Oryza sativa (japonica cultivar-group) putative retroelement
           (OSJNBb0015J03.20), mRNA
          Length = 2004

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 463 ggtggcgggagcgcatgagc 482
           ||||||||||||||||||||
Sbjct: 313 ggtggcgggagcgcatgagc 294
to top
>ref|XM_590055.2| PREDICTED: Bos taurus similar to forkhead-associated (FHA)
            phosphopeptide binding domain 1 (LOC512520), mRNA
          Length = 3285

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 234  ccagagaaagcagtagcagctgcc 257
            ||||||||||||| ||||||||||
Sbjct: 2174 ccagagaaagcagaagcagctgcc 2151
to top
>gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosome 8, complete sequence
          Length = 199464

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ggcatcttaggtatttgttt 72
             ||||||||||||||||||||
Sbjct: 71521 ggcatcttaggtatttgttt 71502
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 29      ggtggacatgtagctggagaaggg 52
               |||||||||| |||||||||||||
Sbjct: 4272481 ggtggacatgaagctggagaaggg 4272504
to top
>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence
          Length = 385816

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   tttctcttttttggggagct 366
             ||||||||||||||||||||
Sbjct: 61299 tttctcttttttggggagct 61318
to top
>emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in linkage group 3, complete
              sequence
          Length = 226081

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    ttggtttctcttttttgggg 362
              ||||||||||||||||||||
Sbjct: 206796 ttggtttctcttttttgggg 206777
to top
>gb|AC110803.5| Homo sapiens BAC clone RP11-724G23 from 4, complete sequence
          Length = 21221

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   ctcttttttggggagctggt 369
             ||||||||||||||||||||
Sbjct: 15521 ctcttttttggggagctggt 15540
to top
>gb|AC160989.2| Mus musculus BAC clone RP23-194N9 from chromosome 9, complete sequence
          Length = 215923

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    acacttggtttctctttttt 358
              ||||||||||||||||||||
Sbjct: 120493 acacttggtttctctttttt 120474
to top
>gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete sequence
          Length = 132894

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 478  tgagcctgcttggggcgagc 497
            ||||||||||||||||||||
Sbjct: 3574 tgagcctgcttggggcgagc 3593
to top
>gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete sequence
          Length = 89758

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 478   tgagcctgcttggggcgagc 497
             ||||||||||||||||||||
Sbjct: 35723 tgagcctgcttggggcgagc 35742
to top
>emb|CR854849.7| Human DNA sequence from clone RP13-79M23 on chromosome 1, complete
              sequence
          Length = 153012

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ggttctcatttctccatatt 181
              ||||||||||||||||||||
Sbjct: 116034 ggttctcatttctccatatt 116015
to top
>emb|BX470067.4| Human DNA sequence from clone WI2-84067D5 on chromosome 1 Contains a
             two preferentially expressed antigen in melanoma (PRAME)
             pseudogenes and the 5' end of the gene for a novel protein
             similar to preferentially expressed antigen in melanoma
             (PRAME), complete sequence
          Length = 41516

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   ggttctcatttctccatatt 181
             ||||||||||||||||||||
Sbjct: 11621 ggttctcatttctccatatt 11602
to top
>emb|AL603890.14| Human DNA sequence from clone RP11-584P2 on chromosome 1 Contains the
             3' end of a novel gene  similar to preferentially
             expressed antigen in melanoma (PRAME), two novel proteins
             similar to preferentially expressed antigen in melanoma
             (PRAME), a novel gene and a CpG island, complete sequence
          Length = 88806

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ggttctcatttctccatatt 181
             ||||||||||||||||||||
Sbjct: 14223 ggttctcatttctccatatt 14242
to top
>emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on chromosome 1 Contains six
              novel genes similar to preferentially expressed antigen in
              melanoma (PRAME), two novel genes, two preferentially
              expressed antigen in melanoma (PRAME) pseudogenes and a CpG
              island, complete sequence
          Length = 184591

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ggttctcatttctccatatt 181
              ||||||||||||||||||||
Sbjct: 140902 ggttctcatttctccatatt 140883
to top
>emb|AL355861.19| Human DNA sequence from clone RP11-567J24 on chromosome 10 Contains the
             5' end of a novel gene, the PRDX3 gene for peroxiredoxin 3
             (AOP1, MER5, AOP-1, SP-22), the 5' end of the GPRK5 gene
             for G protein-coupled receptor kinase 5 (GRK5), a novel
             gene and four CpG islands, complete sequence
          Length = 168528

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttaggtatttgtttccatat 78
             ||||||||||||||||||||
Sbjct: 19948 ttaggtatttgtttccatat 19967
to top
>emb|AL035603.11|HS179E13 Human DNA sequence from clone RP1-179E13 on chromosome 6q22.1-22.33
             Contains ribosomal protein S4, X-linked (cell cycle gene
             2, single-copy abundant mRNA, ribosomal protein S4X
             variant, 40S ribosomal protein S4, X variant)
             (RPS4X)(CCG2, SCAR, SCR10, DXS306) pseudogene, complete
             sequence
          Length = 138443

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   gaaagcagtagcagctgcca 258
             ||||||||||||||||||||
Sbjct: 59185 gaaagcagtagcagctgcca 59204
to top
>gb|AC158756.4| Mus musculus chromosome 5, clone RP24-151L11, complete sequence
          Length = 147858

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   ggcttctactccattgccag 237
             ||||||||||||||||||||
Sbjct: 90550 ggcttctactccattgccag 90569
to top
>emb|AL022101.1|HS845O24 Human DNA sequence from clone RP5-845O24 on chromosome 1p36.1-36.2
             Contains the 3' end of the gene for a novel protein
             similar to preferentially expressed antigen in melanoma
             (PRAME) (LOC65121), four genes for novel proteins similar
             to preferentially expressed antigen in melanoma (PRAME)
             (LOC343068, LOC65122, LOC343070 and LOC343071), a novel
             gene, a pseudogene similar to preferentially expressed
             antigen in melanoma (PRAME) and the gene for a novel
             protein similar to heterogeneous nuclear ribonucleoprotein
             C (C1/C2) (HNRPC) (LOC343069), complete sequence
          Length = 119198

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ggttctcatttctccatatt 181
             ||||||||||||||||||||
Sbjct: 78987 ggttctcatttctccatatt 79006



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ggttctcatttctccatatt 181
             ||||||||||||||||||||
Sbjct: 24234 ggttctcatttctccatatt 24253
to top
>emb|BX248243.23| Zebrafish DNA sequence from clone CH211-225L7 in linkage group 7,
             complete sequence
          Length = 161572

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   attaaacataaaacaagctg 148
             ||||||||||||||||||||
Sbjct: 46681 attaaacataaaacaagctg 46662
to top
>gb|AC163658.2| Mus musculus BAC clone RP23-281B21 from chromosome 14, complete sequence
          Length = 141856

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    agagaaagcagtagcagctg 255
              ||||||||||||||||||||
Sbjct: 115543 agagaaagcagtagcagctg 115562
to top
>gb|AC124799.5| Homo sapiens chromosome 11, clone RP6-106F23, complete sequence
          Length = 161065

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    gtttccatatgatgggaaaa 88
             ||||||||||||||||||||
Sbjct: 38765 gtttccatatgatgggaaaa 38746
to top
>emb|CR854856.5| Human DNA sequence from clone RP13-299H21 on chromosome 1, complete
              sequence
          Length = 186712

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    ggttctcatttctccatatt 181
              ||||||||||||||||||||
Sbjct: 150385 ggttctcatttctccatatt 150404



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ggttctcatttctccatatt 181
             ||||||||||||||||||||
Sbjct: 95649 ggttctcatttctccatatt 95668
to top
>emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chromosome 1, complete
              sequence
          Length = 225410

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ggttctcatttctccatatt 181
              ||||||||||||||||||||
Sbjct: 221957 ggttctcatttctccatatt 221938
to top
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03,
              complete sequence
          Length = 135940

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    ggtggcgggagcgcatgagc 482
              ||||||||||||||||||||
Sbjct: 126248 ggtggcgggagcgcatgagc 126229
to top
>gb|AC104248.3| Homo sapiens chromosome 8, clone RP11-1084E5, complete sequence
          Length = 200318

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   atgtcttcctcttccttctg 424
             ||||||||||||||||||||
Sbjct: 46151 atgtcttcctcttccttctg 46132
to top
>gb|AE011801.1| Xanthomonas axonopodis pv. citri str. 306,  section 179 of 469 of the
            complete genome
          Length = 11819

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 312  tcgatagatttcatgcgctgctga 335
            ||||| ||||||||||||||||||
Sbjct: 3576 tcgatggatttcatgcgctgctga 3599
to top
>gb|AC079638.3| Genomic sequence for Mus musculus, clone RP23-274A20, complete sequence
          Length = 162721

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   agagaaagcagtagcagctg 255
             ||||||||||||||||||||
Sbjct: 53131 agagaaagcagtagcagctg 53150
to top
>gb|AC109632.4| Homo sapiens chromosome 8, clone RP11-46A19, complete sequence
          Length = 152232

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   atgtcttcctcttccttctg 424
             ||||||||||||||||||||
Sbjct: 53257 atgtcttcctcttccttctg 53276
to top
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0089D15, from Chromosome 10, complete sequence
          Length = 164679

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 463    ggtggcgggagcgcatgagc 482
              ||||||||||||||||||||
Sbjct: 163041 ggtggcgggagcgcatgagc 163060
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 463     ggtggcgggagcgcatgagc 482
               ||||||||||||||||||||
Sbjct: 4166212 ggtggcgggagcgcatgagc 4166231
to top
>gb|AC011933.17| Homo sapiens chromosome 17, clone RP11-16C1, complete sequence
          Length = 153211

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    accccgcccagatgtcttcc 413
              ||||||||||||||||||||
Sbjct: 110797 accccgcccagatgtcttcc 110778
to top
>gb|AC013726.7| Homo sapiens BAC clone RP11-400N9 from 2, complete sequence
          Length = 214647

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    cctcttccttctggatgttg 431
              ||||||||||||||||||||
Sbjct: 109020 cctcttccttctggatgttg 109039
to top
>gb|AF392841.1| Oryza sativa subsp. indica clone pg-8-5 NBS-LRR-like resistance
           protein gene, partial sequence
          Length = 502

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 340 cacttggtttctcttttttg 359
           ||||||||||||||||||||
Sbjct: 442 cacttggtttctcttttttg 423
to top
>gb|AC163632.3| Mus musculus BAC clone RP23-339H2 from chromosome 16, complete sequence
          Length = 190341

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    atttctccatattgtcttca 188
              ||||||||||||||||||||
Sbjct: 188800 atttctccatattgtcttca 188819
to top
>gb|AC005137.1|AC005137 Human Chromosome 11p14.3 PAC clone 6-106f23, complete sequence
          Length = 161190

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    gtttccatatgatgggaaaa 88
             ||||||||||||||||||||
Sbjct: 38897 gtttccatatgatgggaaaa 38878
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 140     aacaagctgggcggccatct 159
               ||||||||||||||||||||
Sbjct: 5488412 aacaagctgggcggccatct 5488431
to top
>emb|CT009706.20| Mouse DNA sequence from clone RP23-131H17 on chromosome 9, complete
              sequence
          Length = 215322

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    atctttggttctcatttctc 175
              ||||||||||||||||||||
Sbjct: 160056 atctttggttctcatttctc 160075
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 463     ggtggcgggagcgcatgagc 482
               ||||||||||||||||||||
Sbjct: 4167033 ggtggcgggagcgcatgagc 4167052
to top
>gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosome 9, complete sequence
          Length = 198471

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   acacttggtttctctttttt 358
             ||||||||||||||||||||
Sbjct: 31436 acacttggtttctctttttt 31417
to top
>dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0355, complete sequence
          Length = 124602

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 21750 atattgtcttcactggtttt 21769
to top
>dbj|AP006865.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT37H21, TM1032,
             complete sequence
          Length = 95067

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 48323 atattgtcttcactggtttt 48342
to top
>dbj|AP006685.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45M12, TM0378b,
             complete sequence
          Length = 86433

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 55050 atattgtcttcactggtttt 55069



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 11020 atattgtcttcactggtttt 11001
to top
>dbj|AP006677.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT46E19, TM0371b,
             complete sequence
          Length = 67552

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 61087 atattgtcttcactggtttt 61106
to top
>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266,
             complete sequence
          Length = 113459

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 98871 atattgtcttcactggtttt 98890
to top
>dbj|AP006114.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT43M15, TM0198a,
             complete sequence
          Length = 75051

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 44468 atattgtcttcactggtttt 44487
to top
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175,
             complete sequence
          Length = 108582

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 49862 atattgtcttcactggtttt 49881
to top
>dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT45G21, TM0151,
             complete sequence
          Length = 109264

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 19517 atattgtcttcactggtttt 19536
to top
>dbj|AP004945.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43B20, TM0117b,
           complete sequence
          Length = 114918

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atattgtcttcactggtttt 196
           ||||||||||||||||||||
Sbjct: 129 atattgtcttcactggtttt 148
to top
>dbj|AP004944.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43B20, TM0117a,
             complete sequence
          Length = 33359

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 33075 atattgtcttcactggtttt 33056
to top
>dbj|AP004927.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01G01, TM0081a,
           complete sequence
          Length = 60689

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 atattgtcttcactggtttt 196
           ||||||||||||||||||||
Sbjct: 546 atattgtcttcactggtttt 565
to top
>dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT16I07, TM0040,
             complete sequence
          Length = 92281

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 10745 atattgtcttcactggtttt 10726
to top
>dbj|AP004577.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10N22, TM0381,
            complete sequence
          Length = 80655

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 177  atattgtcttcactggtttt 196
            ||||||||||||||||||||
Sbjct: 7205 atattgtcttcactggtttt 7224
to top
>dbj|AP004533.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14G02, TM0080,
             complete sequence
          Length = 76730

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 55598 atattgtcttcactggtttt 55617
to top
>dbj|AP004478.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012a,
             complete sequence
          Length = 45319

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 29769 atattgtcttcactggtttt 29750
to top
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001,
             complete sequence
          Length = 103397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   atattgtcttcactggtttt 196
             ||||||||||||||||||||
Sbjct: 92916 atattgtcttcactggtttt 92935
to top
>gb|AC154512.2| Mus musculus BAC clone RP24-70L20 from chromosome 16, complete sequence
          Length = 166329

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   atttctccatattgtcttca 188
             ||||||||||||||||||||
Sbjct: 41784 atttctccatattgtcttca 41803
to top
>gb|DQ298752.1| Homo sapiens peroxiredoxin 3 (PRDX3) gene, complete cds
          Length = 14661

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   ttaggtatttgtttccatat 78
            ||||||||||||||||||||
Sbjct: 1388 ttaggtatttgtttccatat 1369
to top
>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete
             sequence
          Length = 235868

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    gtatttgtttccatatgatg 82
             ||||||||||||||||||||
Sbjct: 80941 gtatttgtttccatatgatg 80960
to top
>gb|AC093611.2| Homo sapiens chromosome 3 clone CTD-2059M21 map 3p, complete sequence
          Length = 120926

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   agcagtagcagctgccacaaccac 265
             ||||| ||||||||||||||||||
Sbjct: 70648 agcagcagcagctgccacaaccac 70671
to top
>dbj|AP004580.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1461G7
          Length = 168155

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   atgtcttcctcttccttctg 424
             ||||||||||||||||||||
Sbjct: 24344 atgtcttcctcttccttctg 24325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,993,503
Number of Sequences: 3902068
Number of extensions: 4993503
Number of successful extensions: 106872
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106644
Number of HSP's gapped (non-prelim): 228
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top