Clone Name | rbah61d09 |
---|---|
Clone Library Name | barley_pub |
>gb|AC004816.1|AC004816 Homo sapiens PAC clone RP6-65G23 from 14q24.3, complete sequence Length = 166200 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 333 tgaaagacacttggtttctctttttt 358 ||||||||||||||||| |||||||| Sbjct: 131942 tgaaagacacttggtttatctttttt 131967
>emb|AL445595.6|HS594J14 Homo sapiens chromosome 9 BAC RP11-594J14, complete sequence Length = 161567 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 164 ttctcatttctccatattgtcttcac 189 |||| ||||||||||||||||||||| Sbjct: 55232 ttctaatttctccatattgtcttcac 55207
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 tcctcttccttctggatgttg 431 ||||||||||||||||||||| Sbjct: 80145 tcctcttccttctggatgttg 80165
>gb|AC122775.15| Mus musculus chromosome 5, clone RP24-191K3, complete sequence Length = 158766 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 gaaagacacttggtttctctt 354 ||||||||||||||||||||| Sbjct: 132023 gaaagacacttggtttctctt 132003
>gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, complete sequence Length = 167372 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 gaaagacacttggtttctctt 354 ||||||||||||||||||||| Sbjct: 163976 gaaagacacttggtttctctt 163996
>gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome 5, complete sequence Length = 203321 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 tcctcttccttctggatgttg 431 ||||||||||||||||||||| Sbjct: 14901 tcctcttccttctggatgttg 14921
>gb|AF461135.1| Mus musculus angiomotin mRNA, complete cds Length = 2837 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 tcttcctcttccttctggatg 428 ||||||||||||||||||||| Sbjct: 1539 tcttcctcttccttctggatg 1519
>gb|AC026882.6| Homo sapiens chromosome 3 clone RP11-211K13 map 3p, complete sequence Length = 162422 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ctccattgccagagaaagcag 246 ||||||||||||||||||||| Sbjct: 84248 ctccattgccagagaaagcag 84228
>gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, complete sequence Length = 167457 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 gaaagacacttggtttctctt 354 ||||||||||||||||||||| Sbjct: 164061 gaaagacacttggtttctctt 164081
>gb|AC139451.7| Homo sapiens 3 BAC RP13-1056D16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ggtatttgtttccatatgatg 82 ||||||||||||||||||||| Sbjct: 118422 ggtatttgtttccatatgatg 118402
>gb|AC141000.7| Homo sapiens 3 BAC RP11-480C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175946 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ggtatttgtttccatatgatg 82 ||||||||||||||||||||| Sbjct: 167599 ggtatttgtttccatatgatg 167619
>gb|BC057638.1| Mus musculus angiomotin, mRNA (cDNA clone MGC:67773 IMAGE:2631191), complete cds Length = 2405 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 tcttcctcttccttctggatg 428 ||||||||||||||||||||| Sbjct: 1590 tcttcctcttccttctggatg 1570
>dbj|AK129277.1| Mus musculus mRNA for mKIAA1071 protein Length = 5197 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 tcttcctcttccttctggatg 428 ||||||||||||||||||||| Sbjct: 375 tcttcctcttccttctggatg 355
>ref|NM_153319.1| Mus musculus angiomotin (Amot), mRNA Length = 2837 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 tcttcctcttccttctggatg 428 ||||||||||||||||||||| Sbjct: 1539 tcttcctcttccttctggatg 1519
>emb|AL807753.10| Mouse DNA sequence from clone RP23-359L15 on chromosome X, complete sequence Length = 189848 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 tcttcctcttccttctggatg 428 ||||||||||||||||||||| Sbjct: 99569 tcttcctcttccttctggatg 99589
>gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, complete sequence Length = 235928 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggcttctactccattgccag 237 |||||||||||||||||||| Sbjct: 235430 ggcttctactccattgccag 235411
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 cttcctcttccttctggatg 428 |||||||||||||||||||| Sbjct: 267612 cttcctcttccttctggatg 267631
>ref|NM_195012.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNBb0015J03.20), mRNA Length = 2004 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ggtggcgggagcgcatgagc 482 |||||||||||||||||||| Sbjct: 313 ggtggcgggagcgcatgagc 294
>ref|XM_590055.2| PREDICTED: Bos taurus similar to forkhead-associated (FHA) phosphopeptide binding domain 1 (LOC512520), mRNA Length = 3285 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 ccagagaaagcagtagcagctgcc 257 ||||||||||||| |||||||||| Sbjct: 2174 ccagagaaagcagaagcagctgcc 2151
>gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosome 8, complete sequence Length = 199464 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggcatcttaggtatttgttt 72 |||||||||||||||||||| Sbjct: 71521 ggcatcttaggtatttgttt 71502
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ggtggacatgtagctggagaaggg 52 |||||||||| ||||||||||||| Sbjct: 4272481 ggtggacatgaagctggagaaggg 4272504
>gb|DQ481663.1| Takifugu rubripes HoxAa gene cluster, complete sequence Length = 385816 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tttctcttttttggggagct 366 |||||||||||||||||||| Sbjct: 61299 tttctcttttttggggagct 61318
>emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in linkage group 3, complete sequence Length = 226081 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ttggtttctcttttttgggg 362 |||||||||||||||||||| Sbjct: 206796 ttggtttctcttttttgggg 206777
>gb|AC110803.5| Homo sapiens BAC clone RP11-724G23 from 4, complete sequence Length = 21221 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ctcttttttggggagctggt 369 |||||||||||||||||||| Sbjct: 15521 ctcttttttggggagctggt 15540
>gb|AC160989.2| Mus musculus BAC clone RP23-194N9 from chromosome 9, complete sequence Length = 215923 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 acacttggtttctctttttt 358 |||||||||||||||||||| Sbjct: 120493 acacttggtttctctttttt 120474
>gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete sequence Length = 132894 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 tgagcctgcttggggcgagc 497 |||||||||||||||||||| Sbjct: 3574 tgagcctgcttggggcgagc 3593
>gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete sequence Length = 89758 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 tgagcctgcttggggcgagc 497 |||||||||||||||||||| Sbjct: 35723 tgagcctgcttggggcgagc 35742
>emb|CR854849.7| Human DNA sequence from clone RP13-79M23 on chromosome 1, complete sequence Length = 153012 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggttctcatttctccatatt 181 |||||||||||||||||||| Sbjct: 116034 ggttctcatttctccatatt 116015
>emb|BX470067.4| Human DNA sequence from clone WI2-84067D5 on chromosome 1 Contains a two preferentially expressed antigen in melanoma (PRAME) pseudogenes and the 5' end of the gene for a novel protein similar to preferentially expressed antigen in melanoma (PRAME), complete sequence Length = 41516 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggttctcatttctccatatt 181 |||||||||||||||||||| Sbjct: 11621 ggttctcatttctccatatt 11602
>emb|AL603890.14| Human DNA sequence from clone RP11-584P2 on chromosome 1 Contains the 3' end of a novel gene similar to preferentially expressed antigen in melanoma (PRAME), two novel proteins similar to preferentially expressed antigen in melanoma (PRAME), a novel gene and a CpG island, complete sequence Length = 88806 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggttctcatttctccatatt 181 |||||||||||||||||||| Sbjct: 14223 ggttctcatttctccatatt 14242
>emb|AL365443.16| Human DNA sequence from clone RP11-219C24 on chromosome 1 Contains six novel genes similar to preferentially expressed antigen in melanoma (PRAME), two novel genes, two preferentially expressed antigen in melanoma (PRAME) pseudogenes and a CpG island, complete sequence Length = 184591 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggttctcatttctccatatt 181 |||||||||||||||||||| Sbjct: 140902 ggttctcatttctccatatt 140883
>emb|AL355861.19| Human DNA sequence from clone RP11-567J24 on chromosome 10 Contains the 5' end of a novel gene, the PRDX3 gene for peroxiredoxin 3 (AOP1, MER5, AOP-1, SP-22), the 5' end of the GPRK5 gene for G protein-coupled receptor kinase 5 (GRK5), a novel gene and four CpG islands, complete sequence Length = 168528 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ttaggtatttgtttccatat 78 |||||||||||||||||||| Sbjct: 19948 ttaggtatttgtttccatat 19967
>emb|AL035603.11|HS179E13 Human DNA sequence from clone RP1-179E13 on chromosome 6q22.1-22.33 Contains ribosomal protein S4, X-linked (cell cycle gene 2, single-copy abundant mRNA, ribosomal protein S4X variant, 40S ribosomal protein S4, X variant) (RPS4X)(CCG2, SCAR, SCR10, DXS306) pseudogene, complete sequence Length = 138443 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gaaagcagtagcagctgcca 258 |||||||||||||||||||| Sbjct: 59185 gaaagcagtagcagctgcca 59204
>gb|AC158756.4| Mus musculus chromosome 5, clone RP24-151L11, complete sequence Length = 147858 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggcttctactccattgccag 237 |||||||||||||||||||| Sbjct: 90550 ggcttctactccattgccag 90569
>emb|AL022101.1|HS845O24 Human DNA sequence from clone RP5-845O24 on chromosome 1p36.1-36.2 Contains the 3' end of the gene for a novel protein similar to preferentially expressed antigen in melanoma (PRAME) (LOC65121), four genes for novel proteins similar to preferentially expressed antigen in melanoma (PRAME) (LOC343068, LOC65122, LOC343070 and LOC343071), a novel gene, a pseudogene similar to preferentially expressed antigen in melanoma (PRAME) and the gene for a novel protein similar to heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRPC) (LOC343069), complete sequence Length = 119198 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggttctcatttctccatatt 181 |||||||||||||||||||| Sbjct: 78987 ggttctcatttctccatatt 79006 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggttctcatttctccatatt 181 |||||||||||||||||||| Sbjct: 24234 ggttctcatttctccatatt 24253
>emb|BX248243.23| Zebrafish DNA sequence from clone CH211-225L7 in linkage group 7, complete sequence Length = 161572 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 attaaacataaaacaagctg 148 |||||||||||||||||||| Sbjct: 46681 attaaacataaaacaagctg 46662
>gb|AC163658.2| Mus musculus BAC clone RP23-281B21 from chromosome 14, complete sequence Length = 141856 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 agagaaagcagtagcagctg 255 |||||||||||||||||||| Sbjct: 115543 agagaaagcagtagcagctg 115562
>gb|AC124799.5| Homo sapiens chromosome 11, clone RP6-106F23, complete sequence Length = 161065 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gtttccatatgatgggaaaa 88 |||||||||||||||||||| Sbjct: 38765 gtttccatatgatgggaaaa 38746
>emb|CR854856.5| Human DNA sequence from clone RP13-299H21 on chromosome 1, complete sequence Length = 186712 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggttctcatttctccatatt 181 |||||||||||||||||||| Sbjct: 150385 ggttctcatttctccatatt 150404 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggttctcatttctccatatt 181 |||||||||||||||||||| Sbjct: 95649 ggttctcatttctccatatt 95668
>emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chromosome 1, complete sequence Length = 225410 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggttctcatttctccatatt 181 |||||||||||||||||||| Sbjct: 221957 ggttctcatttctccatatt 221938
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 ggtggcgggagcgcatgagc 482 |||||||||||||||||||| Sbjct: 126248 ggtggcgggagcgcatgagc 126229
>gb|AC104248.3| Homo sapiens chromosome 8, clone RP11-1084E5, complete sequence Length = 200318 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 atgtcttcctcttccttctg 424 |||||||||||||||||||| Sbjct: 46151 atgtcttcctcttccttctg 46132
>gb|AE011801.1| Xanthomonas axonopodis pv. citri str. 306, section 179 of 469 of the complete genome Length = 11819 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 tcgatagatttcatgcgctgctga 335 ||||| |||||||||||||||||| Sbjct: 3576 tcgatggatttcatgcgctgctga 3599
>gb|AC079638.3| Genomic sequence for Mus musculus, clone RP23-274A20, complete sequence Length = 162721 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 agagaaagcagtagcagctg 255 |||||||||||||||||||| Sbjct: 53131 agagaaagcagtagcagctg 53150
>gb|AC109632.4| Homo sapiens chromosome 8, clone RP11-46A19, complete sequence Length = 152232 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 atgtcttcctcttccttctg 424 |||||||||||||||||||| Sbjct: 53257 atgtcttcctcttccttctg 53276
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0089D15, from Chromosome 10, complete sequence Length = 164679 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 ggtggcgggagcgcatgagc 482 |||||||||||||||||||| Sbjct: 163041 ggtggcgggagcgcatgagc 163060
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 ggtggcgggagcgcatgagc 482 |||||||||||||||||||| Sbjct: 4166212 ggtggcgggagcgcatgagc 4166231
>gb|AC011933.17| Homo sapiens chromosome 17, clone RP11-16C1, complete sequence Length = 153211 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 accccgcccagatgtcttcc 413 |||||||||||||||||||| Sbjct: 110797 accccgcccagatgtcttcc 110778
>gb|AC013726.7| Homo sapiens BAC clone RP11-400N9 from 2, complete sequence Length = 214647 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cctcttccttctggatgttg 431 |||||||||||||||||||| Sbjct: 109020 cctcttccttctggatgttg 109039
>gb|AF392841.1| Oryza sativa subsp. indica clone pg-8-5 NBS-LRR-like resistance protein gene, partial sequence Length = 502 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 cacttggtttctcttttttg 359 |||||||||||||||||||| Sbjct: 442 cacttggtttctcttttttg 423
>gb|AC163632.3| Mus musculus BAC clone RP23-339H2 from chromosome 16, complete sequence Length = 190341 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 atttctccatattgtcttca 188 |||||||||||||||||||| Sbjct: 188800 atttctccatattgtcttca 188819
>gb|AC005137.1|AC005137 Human Chromosome 11p14.3 PAC clone 6-106f23, complete sequence Length = 161190 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gtttccatatgatgggaaaa 88 |||||||||||||||||||| Sbjct: 38897 gtttccatatgatgggaaaa 38878
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aacaagctgggcggccatct 159 |||||||||||||||||||| Sbjct: 5488412 aacaagctgggcggccatct 5488431
>emb|CT009706.20| Mouse DNA sequence from clone RP23-131H17 on chromosome 9, complete sequence Length = 215322 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 atctttggttctcatttctc 175 |||||||||||||||||||| Sbjct: 160056 atctttggttctcatttctc 160075
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 ggtggcgggagcgcatgagc 482 |||||||||||||||||||| Sbjct: 4167033 ggtggcgggagcgcatgagc 4167052
>gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosome 9, complete sequence Length = 198471 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 acacttggtttctctttttt 358 |||||||||||||||||||| Sbjct: 31436 acacttggtttctctttttt 31417
>dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0355, complete sequence Length = 124602 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 21750 atattgtcttcactggtttt 21769
>dbj|AP006865.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT37H21, TM1032, complete sequence Length = 95067 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 48323 atattgtcttcactggtttt 48342
>dbj|AP006685.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45M12, TM0378b, complete sequence Length = 86433 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 55050 atattgtcttcactggtttt 55069 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 11020 atattgtcttcactggtttt 11001
>dbj|AP006677.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT46E19, TM0371b, complete sequence Length = 67552 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 61087 atattgtcttcactggtttt 61106
>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266, complete sequence Length = 113459 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 98871 atattgtcttcactggtttt 98890
>dbj|AP006114.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT43M15, TM0198a, complete sequence Length = 75051 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 44468 atattgtcttcactggtttt 44487
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 49862 atattgtcttcactggtttt 49881
>dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT45G21, TM0151, complete sequence Length = 109264 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 19517 atattgtcttcactggtttt 19536
>dbj|AP004945.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43B20, TM0117b, complete sequence Length = 114918 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 129 atattgtcttcactggtttt 148
>dbj|AP004944.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43B20, TM0117a, complete sequence Length = 33359 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 33075 atattgtcttcactggtttt 33056
>dbj|AP004927.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01G01, TM0081a, complete sequence Length = 60689 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 546 atattgtcttcactggtttt 565
>dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT16I07, TM0040, complete sequence Length = 92281 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 10745 atattgtcttcactggtttt 10726
>dbj|AP004577.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10N22, TM0381, complete sequence Length = 80655 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 7205 atattgtcttcactggtttt 7224
>dbj|AP004533.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14G02, TM0080, complete sequence Length = 76730 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 55598 atattgtcttcactggtttt 55617
>dbj|AP004478.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012a, complete sequence Length = 45319 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 29769 atattgtcttcactggtttt 29750
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 atattgtcttcactggtttt 196 |||||||||||||||||||| Sbjct: 92916 atattgtcttcactggtttt 92935
>gb|AC154512.2| Mus musculus BAC clone RP24-70L20 from chromosome 16, complete sequence Length = 166329 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 atttctccatattgtcttca 188 |||||||||||||||||||| Sbjct: 41784 atttctccatattgtcttca 41803
>gb|DQ298752.1| Homo sapiens peroxiredoxin 3 (PRDX3) gene, complete cds Length = 14661 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ttaggtatttgtttccatat 78 |||||||||||||||||||| Sbjct: 1388 ttaggtatttgtttccatat 1369
>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete sequence Length = 235868 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gtatttgtttccatatgatg 82 |||||||||||||||||||| Sbjct: 80941 gtatttgtttccatatgatg 80960
>gb|AC093611.2| Homo sapiens chromosome 3 clone CTD-2059M21 map 3p, complete sequence Length = 120926 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 agcagtagcagctgccacaaccac 265 ||||| |||||||||||||||||| Sbjct: 70648 agcagcagcagctgccacaaccac 70671
>dbj|AP004580.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1461G7 Length = 168155 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 atgtcttcctcttccttctg 424 |||||||||||||||||||| Sbjct: 24344 atgtcttcctcttccttctg 24325 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,993,503 Number of Sequences: 3902068 Number of extensions: 4993503 Number of successful extensions: 106872 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106644 Number of HSP's gapped (non-prelim): 228 length of query: 502 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 480 effective length of database: 17,147,199,772 effective search space: 8230655890560 effective search space used: 8230655890560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)