Clone Name | rbah61d06 |
---|---|
Clone Library Name | barley_pub |
>gb|AY108605.1| Zea mays PCO098639 mRNA sequence Length = 696 Score = 383 bits (193), Expect = e-103 Identities = 395/461 (85%), Gaps = 2/461 (0%) Strand = Plus / Minus Query: 202 cttttagcagccctgctgatctctccacttgaggtacaacagccctgcatggtagtgggt 261 |||| ||||||| ||| | ||||||||||||||||||| |||||||| |||||||| || Sbjct: 469 ctttcagcagccttgcaggtctctccacttgaggtacacaagccctgcgtggtagtgtgt 410 Query: 262 gtaggctccagcaacaaccaagacatggaagagctggtggctgtgcccagcaatgtcgaa 321 ||||||||| |||||||||||||| ||||| ||||||||||||||||| || ||||| || Sbjct: 409 gtaggctccggcaacaaccaagacgtggaacagctggtggctgtgcccggcgatgtcaaa 350 Query: 322 tttcccaggcatncagcgctcaggcacccgagtcgcatacaccaatgctccaagaccgta 381 ||||||||||| ||||||||||| ||||| | |||||| ||||||||||| || ||||| Sbjct: 349 cttcccaggcatccagcgctcaggtacccgtgccgcatataccaatgctcccagcccgta 290 Query: 382 gaacagccccatcaaaacttcatatncggtagtgatcantgcctctggctggtgccagaa 441 ||| |||||||||| || ||| ||| |||| ||| || |||||| || ||||||||||| Sbjct: 289 gaagagccccatcagaatttcgtatccggtcgtgtgcaatgcctccggttggtgccagaa 230 Query: 442 aaggatcagcttgtgaaaaacagggatcacacctgatgctcccatgccgaagaagaggca 501 || | |||||||||| |||||| ||||| || ||||| |||||||| ||||||||||| Sbjct: 229 gagtactagcttgtgaagaacaggtatcacgccagatgcacccatgccaaagaagaggca 170 Query: 502 cgctcgtatggttcggaactccgggttctggaagactgggagcagagagaatgcgatagt 561 |||| ||||||| ||||||||| || |||||||| || || |||||||| |||||||| Sbjct: 169 tgctctgatggttctgaactccggattttggaagaccggaagtagagagaacgcgatagt 110 Query: 562 tgctaatcctagaatagttatgaagcttgaggtacaggttgcaaaagaaaggatggcaca 621 ||| | |||||| || |||||||| | |||||||||||||||||||||| || | ||||| Sbjct: 109 tgccactcctaggatggttatgaaac-tgaggtacaggttgcaaaagaaggggtagcaca 51 Query: 622 tgaaagagtantatactggagggtagaaaggaagtggcgat 662 ||||||| || ||||||||||||||| ||||| |||||||| Sbjct: 50 tgaaagaatagtatactggagggtag-aaggatgtggcgat 11
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 377 bits (190), Expect = e-101 Identities = 407/478 (85%), Gaps = 2/478 (0%) Strand = Plus / Plus Query: 221 tctctccacttgaggtacaacagccctgcatggtagtgggtgtaggctccagcaacaacc 280 ||||||||||||||||| | ||| || | ||| ||||| ||||| |||||||||||||| Sbjct: 7016799 tctctccacttgaggtataccagtccagaatgatagtgtgtgtatgctccagcaacaact 7016858 Query: 281 aagacatggaagagctggtggctgtgcccagcaatgtcgaatttcccaggcatncagcgc 340 || ||||| || ||||||||||| || ||||||||||| ||||| |||||||| |||||| Sbjct: 7016859 aacacatgaaaaagctggtggctatgaccagcaatgtcaaattttccaggcatccagcgc 7016918 Query: 341 tcaggcacccgagtcgcatacaccaatgctccaagaccgtagaacagccccatcaaaact 400 || ||||||||||| |||||||||| ||| |||| || ||||| || ||||||| ||| Sbjct: 7016919 tcgggcacccgagttgcatacaccagtgccccaatgccatagaaaaggcccatcagaacc 7016978 Query: 401 tcatatncggtagtgatcantgcctctggctggtgccagaaaaggatcagcttgtgaaaa 460 |||||| |||||||| || ||||||||| |||||||| || ||||||| ||||||| Sbjct: 7016979 tcatatgcggtagtgtgcaatgcctctggttggtgccaaaagaggatcaatttgtgaatg 7017038 Query: 461 acagggatcacacctgatgctcccatgccgaagaagaggcacgctcgtatggttcggaac 520 ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| || ||| Sbjct: 7017039 acagggatcacgccggatgcacccatgccaaagaagaggcatgctcgtatggtccgaaac 7017098 Query: 521 tccgggttctggaagactgggagcagagagaatgcgatagttgctaatcctagaatagtt 580 || ||||||||||| || ||||| | |||||| || |||||||| | ||||| ||||||| Sbjct: 7017099 tcagggttctggaaaacagggagtaaagagaaagcaatagttgccactcctaaaatagtt 7017158 Query: 581 atgaagcttgaggtacaggttgcaaaagaaaggatggcacatgaaagagtantatactgg 640 ||| ||| |||| ||||||||||||||||| |||| |||||||||||| || |||||||| Sbjct: 7017159 atgcagc-tgagatacaggttgcaaaagaatggatagcacatgaaagaatagtatactgg 7017217 Query: 641 agggtagaaaggaagtggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 ||||||| || || || ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct: 7017218 agggtag-aatgatgttgcgataagagcagcaatgcctgcataatcaaggcgaagcat 7017274 Score = 50.1 bits (25), Expect = 0.010 Identities = 54/64 (84%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtgcccagcaatgtcgaatttcccaggcatncagcgctcaggc 346 ||||| |||||||||||||| || || | |||||| ||||| ||||| || ||||| ||| Sbjct: 5222957 tggaacagctggtggctgtggccggcgaggtcgaacttccccggcatccaccgctccggc 5222898 Query: 347 accc 350 |||| Sbjct: 5222897 accc 5222894
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 377 bits (190), Expect = e-101 Identities = 407/478 (85%), Gaps = 2/478 (0%) Strand = Plus / Minus Query: 221 tctctccacttgaggtacaacagccctgcatggtagtgggtgtaggctccagcaacaacc 280 ||||||||||||||||| | ||| || | ||| ||||| ||||| |||||||||||||| Sbjct: 65566 tctctccacttgaggtataccagtccagaatgatagtgtgtgtatgctccagcaacaact 65507 Query: 281 aagacatggaagagctggtggctgtgcccagcaatgtcgaatttcccaggcatncagcgc 340 || ||||| || ||||||||||| || ||||||||||| ||||| |||||||| |||||| Sbjct: 65506 aacacatgaaaaagctggtggctatgaccagcaatgtcaaattttccaggcatccagcgc 65447 Query: 341 tcaggcacccgagtcgcatacaccaatgctccaagaccgtagaacagccccatcaaaact 400 || ||||||||||| |||||||||| ||| |||| || ||||| || ||||||| ||| Sbjct: 65446 tcgggcacccgagttgcatacaccagtgccccaatgccatagaaaaggcccatcagaacc 65387 Query: 401 tcatatncggtagtgatcantgcctctggctggtgccagaaaaggatcagcttgtgaaaa 460 |||||| |||||||| || ||||||||| |||||||| || ||||||| ||||||| Sbjct: 65386 tcatatgcggtagtgtgcaatgcctctggttggtgccaaaagaggatcaatttgtgaatg 65327 Query: 461 acagggatcacacctgatgctcccatgccgaagaagaggcacgctcgtatggttcggaac 520 ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| || ||| Sbjct: 65326 acagggatcacgccggatgcacccatgccaaagaagaggcatgctcgtatggtccgaaac 65267 Query: 521 tccgggttctggaagactgggagcagagagaatgcgatagttgctaatcctagaatagtt 580 || ||||||||||| || ||||| | |||||| || |||||||| | ||||| ||||||| Sbjct: 65266 tcagggttctggaaaacagggagtaaagagaaagcaatagttgccactcctaaaatagtt 65207 Query: 581 atgaagcttgaggtacaggttgcaaaagaaaggatggcacatgaaagagtantatactgg 640 ||| ||| |||| ||||||||||||||||| |||| |||||||||||| || |||||||| Sbjct: 65206 atgcagc-tgagatacaggttgcaaaagaatggatagcacatgaaagaatagtatactgg 65148 Query: 641 agggtagaaaggaagtggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 ||||||| || || || ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct: 65147 agggtag-aatgatgttgcgataagagcagcaatgcctgcataatcaaggcgaagcat 65091
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 377 bits (190), Expect = e-101 Identities = 407/478 (85%), Gaps = 2/478 (0%) Strand = Plus / Plus Query: 221 tctctccacttgaggtacaacagccctgcatggtagtgggtgtaggctccagcaacaacc 280 ||||||||||||||||| | ||| || | ||| ||||| ||||| |||||||||||||| Sbjct: 7014694 tctctccacttgaggtataccagtccagaatgatagtgtgtgtatgctccagcaacaact 7014753 Query: 281 aagacatggaagagctggtggctgtgcccagcaatgtcgaatttcccaggcatncagcgc 340 || ||||| || ||||||||||| || ||||||||||| ||||| |||||||| |||||| Sbjct: 7014754 aacacatgaaaaagctggtggctatgaccagcaatgtcaaattttccaggcatccagcgc 7014813 Query: 341 tcaggcacccgagtcgcatacaccaatgctccaagaccgtagaacagccccatcaaaact 400 || ||||||||||| |||||||||| ||| |||| || ||||| || ||||||| ||| Sbjct: 7014814 tcgggcacccgagttgcatacaccagtgccccaatgccatagaaaaggcccatcagaacc 7014873 Query: 401 tcatatncggtagtgatcantgcctctggctggtgccagaaaaggatcagcttgtgaaaa 460 |||||| |||||||| || ||||||||| |||||||| || ||||||| ||||||| Sbjct: 7014874 tcatatgcggtagtgtgcaatgcctctggttggtgccaaaagaggatcaatttgtgaatg 7014933 Query: 461 acagggatcacacctgatgctcccatgccgaagaagaggcacgctcgtatggttcggaac 520 ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| || ||| Sbjct: 7014934 acagggatcacgccggatgcacccatgccaaagaagaggcatgctcgtatggtccgaaac 7014993 Query: 521 tccgggttctggaagactgggagcagagagaatgcgatagttgctaatcctagaatagtt 580 || ||||||||||| || ||||| | |||||| || |||||||| | ||||| ||||||| Sbjct: 7014994 tcagggttctggaaaacagggagtaaagagaaagcaatagttgccactcctaaaatagtt 7015053 Query: 581 atgaagcttgaggtacaggttgcaaaagaaaggatggcacatgaaagagtantatactgg 640 ||| ||| |||| ||||||||||||||||| |||| |||||||||||| || |||||||| Sbjct: 7015054 atgcagc-tgagatacaggttgcaaaagaatggatagcacatgaaagaatagtatactgg 7015112 Query: 641 agggtagaaaggaagtggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 ||||||| || || || ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct: 7015113 agggtag-aatgatgttgcgataagagcagcaatgcctgcataatcaaggcgaagcat 7015169 Score = 50.1 bits (25), Expect = 0.010 Identities = 54/64 (84%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtgcccagcaatgtcgaatttcccaggcatncagcgctcaggc 346 ||||| |||||||||||||| || || | |||||| ||||| ||||| || ||||| ||| Sbjct: 5222172 tggaacagctggtggctgtggccggcgaggtcgaacttccccggcatccaccgctccggc 5222113 Query: 347 accc 350 |||| Sbjct: 5222112 accc 5222109
>dbj|AK072709.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138G24, full insert sequence Length = 1950 Score = 377 bits (190), Expect = e-101 Identities = 407/478 (85%), Gaps = 2/478 (0%) Strand = Plus / Minus Query: 221 tctctccacttgaggtacaacagccctgcatggtagtgggtgtaggctccagcaacaacc 280 ||||||||||||||||| | ||| || | ||| ||||| ||||| |||||||||||||| Sbjct: 1661 tctctccacttgaggtataccagtccagaatgatagtgtgtgtatgctccagcaacaact 1602 Query: 281 aagacatggaagagctggtggctgtgcccagcaatgtcgaatttcccaggcatncagcgc 340 || ||||| || ||||||||||| || ||||||||||| ||||| |||||||| |||||| Sbjct: 1601 aacacatgaaaaagctggtggctatgaccagcaatgtcaaattttccaggcatccagcgc 1542 Query: 341 tcaggcacccgagtcgcatacaccaatgctccaagaccgtagaacagccccatcaaaact 400 || ||||||||||| |||||||||| ||| |||| || ||||| || ||||||| ||| Sbjct: 1541 tcgggcacccgagttgcatacaccagtgccccaatgccatagaaaaggcccatcagaacc 1482 Query: 401 tcatatncggtagtgatcantgcctctggctggtgccagaaaaggatcagcttgtgaaaa 460 |||||| |||||||| || ||||||||| |||||||| || ||||||| ||||||| Sbjct: 1481 tcatatgcggtagtgtgcaatgcctctggttggtgccaaaagaggatcaatttgtgaatg 1422 Query: 461 acagggatcacacctgatgctcccatgccgaagaagaggcacgctcgtatggttcggaac 520 ||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| || ||| Sbjct: 1421 acagggatcacgccggatgcacccatgccaaagaagaggcatgctcgtatggtccgaaac 1362 Query: 521 tccgggttctggaagactgggagcagagagaatgcgatagttgctaatcctagaatagtt 580 || ||||||||||| || ||||| | |||||| || |||||||| | ||||| ||||||| Sbjct: 1361 tcagggttctggaaaacagggagtaaagagaaagcaatagttgccactcctaaaatagtt 1302 Query: 581 atgaagcttgaggtacaggttgcaaaagaaaggatggcacatgaaagagtantatactgg 640 ||| ||| |||| ||||||||||||||||| |||| |||||||||||| || |||||||| Sbjct: 1301 atgcagc-tgagatacaggttgcaaaagaatggatagcacatgaaagaatagtatactgg 1243 Query: 641 agggtagaaaggaagtggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 ||||||| || || || ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct: 1242 agggtag-aatgatgttgcgataagagcagcaatgcctgcataatcaaggcgaagcat 1186
>ref|XM_470624.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2469 Score = 250 bits (126), Expect = 5e-63 Identities = 272/319 (85%), Gaps = 2/319 (0%) Strand = Plus / Minus Query: 380 tagaacagccccatcaaaacttcatatncggtagtgatcantgcctctggctggtgccag 439 ||||| || ||||||| ||| |||||| |||||||| || ||||||||| |||||||| Sbjct: 1037 tagaaaaggcccatcagaacctcatatgcggtagtgtgcaatgcctctggttggtgccaa 978 Query: 440 aaaaggatcagcttgtgaaaaacagggatcacacctgatgctcccatgccgaagaagagg 499 || ||||||| ||||||| ||||||||||| || ||||| |||||||| ||||||||| Sbjct: 977 aagaggatcaatttgtgaatgacagggatcacgccggatgcacccatgccaaagaagagg 918 Query: 500 cacgctcgtatggttcggaactccgggttctggaagactgggagcagagagaatgcgata 559 || ||||||||||| || ||||| ||||||||||| || ||||| | |||||| || ||| Sbjct: 917 catgctcgtatggtccgaaactcagggttctggaaaacagggagtaaagagaaagcaata 858 Query: 560 gttgctaatcctagaatagttatgaagcttgaggtacaggttgcaaaagaaaggatggca 619 ||||| | ||||| |||||||||| ||| |||| ||||||||||||||||| |||| ||| Sbjct: 857 gttgccactcctaaaatagttatgcagc-tgagatacaggttgcaaaagaatggatagca 799 Query: 620 catgaaagagtantatactggagggtagaaaggaagtggcgataagagctgcaatgcccg 679 ||||||||| || ||||||||||||||| || || || ||||||||||| |||||||| | Sbjct: 798 catgaaagaatagtatactggagggtag-aatgatgttgcgataagagcagcaatgcctg 740 Query: 680 catagtcaagccgaagcat 698 |||| ||||| |||||||| Sbjct: 739 cataatcaaggcgaagcat 721
>gb|DQ306830.1| Hevea brasiliensis isolate SSH101 mRNA sequence Length = 646 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 221 tctctccacttgaggtacaacagccctgcatggtagtgggtgtaggctccagcaacaacc 280 ||||||||||||||||| | |||||| ||||| || || ||||| || ||||| || || Sbjct: 434 tctctccacttgaggtaaaccagccccgcatgataatgagtgtaagccccagccactaca 375 Query: 281 aagacatggaagagctggtggctgtgcccagcaatgtcgaatttcccaggcat 333 || | |||||| || |||||||||||||| |||||||| ||||| |||||||| Sbjct: 374 aatatatggaaaagttggtggctgtgccctgcaatgtcaaattttccaggcat 322
>emb|CT573500.2| Medicago truncatula chromosome 5 clone mte1-57o10, COMPLETE SEQUENCE Length = 95579 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 244 ccctgcatggtagtgggtgtaggctccagcaacaaccaagacatggaagagctggtggct 303 ||||||||| || || ||||| |||||||| |||||||| ||||| || | ||||| || Sbjct: 62140 ccctgcatgataatgagtgtatgctccagctacaaccaatacatgaaacaattggtgact 62081 Query: 304 gtgcccagcaatgtcgaatttcccaggcat 333 ||| ||||||||||| |||||||||||||| Sbjct: 62080 gtgtccagcaatgtcaaatttcccaggcat 62051
>ref|NM_119931.2| Arabidopsis thaliana unknown protein AT4G37680 mRNA, complete cds Length = 1546 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 970 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 912 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 911 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 870
>ref|NM_119994.2| Arabidopsis thaliana unknown protein AT4G38320 mRNA, complete cds Length = 1432 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 935 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 877 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 876 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 835
>gb|AY096622.1| Arabidopsis thaliana unknown protein (At4g38310) mRNA, complete cds Length = 1156 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 767 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 709 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 708 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 667
>gb|AY070414.1| Arabidopsis thaliana unknown protein (At4g38320) mRNA, complete cds Length = 1449 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 935 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 877 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 876 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 835
>gb|AY056348.1| Arabidopsis thaliana unknown protein (At4g37680) mRNA, complete cds Length = 1189 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 767 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 709 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 708 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 667
>gb|AF360173.1| Arabidopsis thaliana unknown protein (At4g37680) mRNA, complete cds Length = 1499 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 970 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 912 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 911 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 870
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 58966 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 58908 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 58907 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 58866
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 4609 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 4551 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 4550 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 4509
>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87 Length = 196339 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 195948 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 195890 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 195889 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 195848
>emb|AL035709.1|ATT28I19 Arabidopsis thaliana DNA chromosome 4, BAC clone T28I19 (ESSA project) Length = 110766 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 907 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 849 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 848 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 807
>emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, BAC clone F22I13 (ESSA project) Length = 93760 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 18009 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 17951 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 17950 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 17909
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 138043 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 137985 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 137984 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 137943
>emb|BX827861.1|CNS0A4F4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH28ZD10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1412 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 935 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 877 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 876 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 835
>emb|BX827618.1|CNS0A4LY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS84ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1485 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 966 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 908 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 907 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 866
>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome IV, complete sequence Length = 107740 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 106559 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 106617 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 106618 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 106659
>dbj|AK176236.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL23-12-H04 Length = 1467 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 935 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 877 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 876 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 835
>dbj|AK176200.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL23-07-H08 Length = 1467 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 935 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 877 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 876 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 835
>dbj|AK176182.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL23-05-B19 Length = 1467 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 935 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 877 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 876 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 835
>emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, BAC clone F19F18 (ESSA project) Length = 91740 Score = 69.9 bits (35), Expect = 1e-08 Identities = 86/102 (84%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 72526 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 72468 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || ||||||| |||||| Sbjct: 72467 cgctattagagctgcgatgccggcgtaatcaagcctaagcat 72426
>gb|AY089067.1| Arabidopsis thaliana clone 262351 mRNA, complete sequence Length = 1530 Score = 61.9 bits (31), Expect = 3e-06 Identities = 85/102 (83%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 597 aggttgcaaaagaaaggatggcacatgaaagagtantatactggagggtagaaaggaagt 656 |||||||| |||||||||| |||||||| ||||| || || ||||||||| |||||||| Sbjct: 955 aggttgcagaagaaaggatcacacatgaaggagtaataaaccggagggtag-aaggaagt 897 Query: 657 ggcgataagagctgcaatgcccgcatagtcaagccgaagcat 698 || || |||||||| ||||| || || | ||||| |||||| Sbjct: 896 cgctattagagctgcgatgccggcgtaataaagcctaagcat 855
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 50.1 bits (25), Expect = 0.010 Identities = 54/64 (84%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtgcccagcaatgtcgaatttcccaggcatncagcgctcaggc 346 ||||| |||||||||||||| || || | |||||| ||||| ||||| || ||||| ||| Sbjct: 46359 tggaacagctggtggctgtggccggcgaggtcgaacttccccggcatccaccgctccggc 46300 Query: 347 accc 350 |||| Sbjct: 46299 accc 46296
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 50.1 bits (25), Expect = 0.010 Identities = 54/64 (84%) Strand = Plus / Plus Query: 287 tggaagagctggtggctgtgcccagcaatgtcgaatttcccaggcatncagcgctcaggc 346 ||||| |||||||||||||| || || | |||||| ||||| ||||| || ||||| ||| Sbjct: 33561 tggaacagctggtggctgtggccggcgaggtcgaacttccccggcatccaccgctccggc 33620 Query: 347 accc 350 |||| Sbjct: 33621 accc 33624
>ref|XM_430184.1| PREDICTED: Gallus gallus LOC424774 (LOC424774), mRNA Length = 2153 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 287 tggaagagctggtggctgtgccc 309 ||||||||||||||||||||||| Sbjct: 215 tggaagagctggtggctgtgccc 237
>gb|BC111284.1| Bos taurus progestin and adipoQ receptor family member VII, mRNA (cDNA clone MGC:133955 IMAGE:8068826), complete cds Length = 1340 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 aagacatggaagagctggtggc 302 |||||||||||||||||||||| Sbjct: 964 aagacatggaagagctggtggc 943
>ref|NM_001038553.1| Bos taurus progestin and adipoQ receptor family member VII (PAQR7), mRNA Length = 1340 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 aagacatggaagagctggtggc 302 |||||||||||||||||||||| Sbjct: 964 aagacatggaagagctggtggc 943
>gb|DQ318952.1| Ovis aries membrane progesterone receptor gene, complete cds Length = 1199 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 aagacatggaagagctggtggc 302 |||||||||||||||||||||| Sbjct: 868 aagacatggaagagctggtggc 847
>gb|AE013187.1| Thermoanaerobacter tengcongensis MB4, section 214 of 244 of the complete genome Length = 11851 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 tatgaagcttgctgaatttaa 26 ||||||||||||||||||||| Sbjct: 5638 tatgaagcttgctgaatttaa 5618
>emb|CR385077.11| Zebrafish DNA sequence from clone CH211-262M14 in linkage group 15, complete sequence Length = 105764 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttaattttacttgtttattat 81 ||||||||||||||||||||| Sbjct: 21560 ttaattttacttgtttattat 21580
>emb|AL590683.16| Human DNA sequence from clone RP11-10N16 on chromosome 1 Contains the 5' end of the IL22RA1 gene for interleukin 22 receptor alpha 1, the IL28RA gene for interleukin 28 receptor alpha (interferon, lambda receptor), a novel gene and the 3' end of a novel gene, complete sequence Length = 164684 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 atggaagagctggtggctgtg 306 ||||||||||||||||||||| Sbjct: 22806 atggaagagctggtggctgtg 22826
>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete sequence Length = 130718 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 agcttttagcagccctgctga 220 ||||||||||||||||||||| Sbjct: 39597 agcttttagcagccctgctga 39617
>emb|BX914204.20| Zebrafish DNA sequence from clone CH211-113E18 in linkage group 18, complete sequence Length = 169369 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttaattttacttgtttattat 81 ||||||||||||||||||||| Sbjct: 122348 ttaattttacttgtttattat 122328
>emb|BX936456.6| Zebrafish DNA sequence from clone DKEY-266J9 in linkage group 18, complete sequence Length = 173079 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttaattttacttgtttattat 81 ||||||||||||||||||||| Sbjct: 89318 ttaattttacttgtttattat 89298
>gb|AY966010.1| Dendroctonus jeffreyi acetoacetyl-CoA thiolase mRNA, complete cds Length = 1391 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 attttacttgtttattatgtc 84 ||||||||||||||||||||| Sbjct: 1320 attttacttgtttattatgtc 1340
>emb|AL935145.12| Zebrafish DNA sequence from clone CH211-173B9 in linkage group 20, complete sequence Length = 157156 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttaattttacttgtttattat 81 ||||||||||||||||||||| Sbjct: 65942 ttaattttacttgtttattat 65962
>ref|XM_631446.1| Dictyostelium discoideum hypothetical protein (DDB0188125), partial mRNA Length = 4104 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 taattttacttgtttattat 81 |||||||||||||||||||| Sbjct: 3342 taattttacttgtttattat 3323
>ref|XM_631445.1| Dictyostelium discoideum hypothetical protein (DDB0188124), partial mRNA Length = 4065 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 taattttacttgtttattat 81 |||||||||||||||||||| Sbjct: 3279 taattttacttgtttattat 3260
>ref|XM_526335.1| PREDICTED: Pan troglodytes similar to progestin and adipoQ receptor family member IX (LOC470952), mRNA Length = 1134 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtg 306 |||||||||||||||||||| Sbjct: 944 tggaagagctggtggctgtg 925
>ref|NM_198504.1| Homo sapiens progestin and adipoQ receptor family member IX (PAQR9), mRNA Length = 2103 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtg 306 |||||||||||||||||||| Sbjct: 944 tggaagagctggtggctgtg 925
>gb|AY424287.1| Homo sapiens progestin and adipoQ receptor family member IX (PAQR9) mRNA, complete cds Length = 1321 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtg 306 |||||||||||||||||||| Sbjct: 1021 tggaagagctggtggctgtg 1002
>ref|XM_600654.2| PREDICTED: Bos taurus similar to progestin and adipoQ receptor family member IX (LOC522374), mRNA Length = 732 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtg 306 |||||||||||||||||||| Sbjct: 542 tggaagagctggtggctgtg 523
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tgatctctccacttgaggta 237 |||||||||||||||||||| Sbjct: 827838 tgatctctccacttgaggta 827819
>gb|AE009191.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 217 of 256 of the complete sequence Length = 10816 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aagacatggaagagctggtg 300 |||||||||||||||||||| Sbjct: 10607 aagacatggaagagctggtg 10626
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tgatctctccacttgaggta 237 |||||||||||||||||||| Sbjct: 925203 tgatctctccacttgaggta 925184
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tgatctctccacttgaggta 237 |||||||||||||||||||| Sbjct: 894157 tgatctctccacttgaggta 894138
>ref|XM_542820.2| PREDICTED: Canis familiaris similar to progestin and adipoQ receptor family member IX (LOC485700), mRNA Length = 1554 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtg 306 |||||||||||||||||||| Sbjct: 1256 tggaagagctggtggctgtg 1237
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tgatctctccacttgaggta 237 |||||||||||||||||||| Sbjct: 821768 tgatctctccacttgaggta 821749
>emb|AL590787.24| Human DNA sequence from clone RP11-271M24 on chromosome 13 Contains the MTMR6 gene for myotubularin related protein 6, the 5' end of a novel gene (KIAA0410) and 2 CpG islands, complete sequence Length = 122589 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ggaagagctggtggctgtgc 307 |||||||||||||||||||| Sbjct: 10917 ggaagagctggtggctgtgc 10936
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggtggctgtgcccagcaatg 316 |||||||||||||||||||| Sbjct: 1774274 ggtggctgtgcccagcaatg 1774293
>emb|AL080284.20|HSJ177I10 Human DNA sequence from clone RP1-177I10 on chromosome 6q16.1-16.3 Contains a novel gene, complete sequence Length = 160750 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcaacaaccaagacatggaa 291 |||||||||||||||||||| Sbjct: 27643 gcaacaaccaagacatggaa 27662
>emb|AL034343.17|HS108C2 Human DNA sequence from clone RP1-108C2 on chromosome 6p12.1-21.1 Contains the MCM3 gene for MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), a CACT (carnitine/acylcarnitine translocase) pseudogene, the IL17F gene for interleukin 17F (ML1 ML-1) and a CpG island, complete sequence Length = 130904 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tttacttgtttattatgtct 85 |||||||||||||||||||| Sbjct: 39209 tttacttgtttattatgtct 39228
>gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183100 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtg 306 |||||||||||||||||||| Sbjct: 36297 tggaagagctggtggctgtg 36278
>emb|CR556709.9| Zebrafish DNA sequence from clone DKEY-174C12 in linkage group 20 Contains the 3' end of the gene for a novel protein similar to vertebrate ring finger protein 144 (RNF144), the gene for a novel protein (zgc:63886) and the gene for a novel GDSL-like Lipase/Acylhydrolase domain containing protein, complete sequence Length = 73449 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 attttacttgtttattatgt 83 |||||||||||||||||||| Sbjct: 38078 attttacttgtttattatgt 38059
>gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, complete sequence Length = 189559 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cattacccagattgaacaag 134 |||||||||||||||||||| Sbjct: 59667 cattacccagattgaacaag 59686
>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence Length = 146364 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tttacttgtttattatgtct 85 |||||||||||||||||||| Sbjct: 27343 tttacttgtttattatgtct 27362
>dbj|AK123932.1| Homo sapiens cDNA FLJ41938 fis, clone PERIC2006035 Length = 2103 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtg 306 |||||||||||||||||||| Sbjct: 944 tggaagagctggtggctgtg 925
>dbj|AK093381.1| Homo sapiens cDNA FLJ36062 fis, clone TESTI2018697 Length = 1825 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtg 306 |||||||||||||||||||| Sbjct: 165 tggaagagctggtggctgtg 146
>gb|AC114497.1| Homo sapiens chromosome 1 clone RP11-568G23, complete sequence Length = 127715 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 attttacttgtttattatgt 83 |||||||||||||||||||| Sbjct: 44585 attttacttgtttattatgt 44566
>gb|AC107302.4| Homo sapiens 3 BAC RP11-564P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194234 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cttaattttacttgtttatt 79 |||||||||||||||||||| Sbjct: 116781 cttaattttacttgtttatt 116800
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aagacatggaagagctggtg 300 |||||||||||||||||||| Sbjct: 2413655 aagacatggaagagctggtg 2413674
>gb|AC009532.9| Homo sapiens chromosome , clone RP11-58H20, complete sequence Length = 165698 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 tacaacagccctgcatggta 255 |||||||||||||||||||| Sbjct: 117887 tacaacagccctgcatggta 117906
>emb|AJ608716.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np011 Length = 259 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 298 gtggctgtgcccagcaatgtcgaatttcccaggcat 333 |||||| || ||||||||||| |||||||| ||||| Sbjct: 207 gtggctttggccagcaatgtcaaatttcccgggcat 172
>gb|AC097709.3| Homo sapiens BAC clone RP11-19B4 from 4, complete sequence Length = 160741 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 ctggaagactgggagcagag 548 |||||||||||||||||||| Sbjct: 107848 ctggaagactgggagcagag 107867
>gb|AC105756.5| Homo sapiens BAC clone RP11-78A21 from 4, complete sequence Length = 156394 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 caacaaccaagacatggaag 292 |||||||||||||||||||| Sbjct: 13752 caacaaccaagacatggaag 13771
>ref|XM_236503.3| PREDICTED: Rattus norvegicus progestin and adipoQ receptor family member IX (predicted) (Paqr9_predicted), mRNA Length = 1335 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tggaagagctggtggctgtg 306 |||||||||||||||||||| Sbjct: 1145 tggaagagctggtggctgtg 1126
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tgatctctccacttgaggta 237 |||||||||||||||||||| Sbjct: 816707 tgatctctccacttgaggta 816688
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tgatctctccacttgaggta 237 |||||||||||||||||||| Sbjct: 947227 tgatctctccacttgaggta 947208
>emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in linkage group 11, complete sequence Length = 220631 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 taattttacttgtttattat 81 |||||||||||||||||||| Sbjct: 34303 taattttacttgtttattat 34284
>dbj|AB091102.1| Marchantia polymorpha gene for ftsZ1, complete cds Length = 3926 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 aggtacaggttgcaaaagaa 610 |||||||||||||||||||| Sbjct: 1866 aggtacaggttgcaaaagaa 1847
>gb|AC154382.1| Mus musculus BAC clone RP23-51D17 from 13, complete sequence Length = 180348 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 tggtagtgggtgtaggctcc 270 |||||||||||||||||||| Sbjct: 93762 tggtagtgggtgtaggctcc 93743
>emb|AL662887.13| Mouse DNA sequence from clone RP23-400P17 on chromosome 11, complete sequence Length = 198011 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 ctctccacttgaggtacaacagcc 245 ||||||||| |||||||||||||| Sbjct: 22848 ctctccactagaggtacaacagcc 22871
>emb|AL805981.11| Mouse DNA sequence from clone RP23-275G4 on chromosome 4, complete sequence Length = 210185 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 ccttaattttacttgtttattatgtcta 86 |||||||||||||||| |||| |||||| Sbjct: 124623 ccttaattttacttgtatattttgtcta 124650
>emb|AL833787.8| Mouse DNA sequence from clone RP23-228E2 on chromosome 2, complete sequence Length = 237055 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gacatggaagagctggtggc 302 |||||||||||||||||||| Sbjct: 21512 gacatggaagagctggtggc 21531 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,501,666 Number of Sequences: 3902068 Number of extensions: 5501666 Number of successful extensions: 105205 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104924 Number of HSP's gapped (non-prelim): 270 length of query: 705 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 682 effective length of database: 17,143,297,704 effective search space: 11691729034128 effective search space used: 11691729034128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)