ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ298132.1|HVU298132 Hordeum vulgare mRNA for polyamine oxid... 743 0.0
2emb|AJ234402.1|HVU234402 Hordeum vulgare partial mRNA; clone cMW... 379 e-102
3emb|AJ304793.1|HVU304793 Hordeum vulgare bpao2 gene for flavin c... 339 6e-90
4emb|AJ298131.1|HVU298131 Hordeum vulgare mRNA for polyamine oxid... 204 2e-49
5ref|XM_450667.1| Oryza sativa (japonica cultivar-group), mRNA 178 1e-41
6emb|AJ002204.1|ZMJ002204 Zea mays mRNA for flavin containing pol... 167 5e-38
7gb|AY107888.1| Zea mays PCO061908 mRNA sequence 167 5e-38
8ref|XM_470573.1| Oryza sativa (japonica cultivar-group), predic... 161 3e-36
9emb|AJ251568.1|ZMA251568 Zea mays PAO gene for flavin containing... 159 1e-35
10emb|AJ251018.1|ZMA251018 Zea mays pao gene for polyamine oxidase... 159 1e-35
11ref|XM_450669.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-34
12dbj|AK069392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
13emb|AJ251019.1|ZMA251019 Zea mays pao gene for polyamine oxidase... 151 3e-33
14emb|AJ304792.1|HVU304792 Hordeum vulgare bpao1 gene for flavin c... 107 4e-20
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 103 6e-19
16gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 103 6e-19
17dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
19dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
20dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
21gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 geno... 56 1e-04
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
23gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
24gb|AC110085.3| Homo sapiens BAC clone RP11-603P13 from 4, comple... 42 1.8
25emb|AL928639.5| Mouse DNA sequence from clone RP23-446O17 on chr... 42 1.8
26gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
27ref|XM_627096.1| Cryptosporidium parvum Iowa II mannose-6-phosph... 40 7.3
28dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3

>emb|AJ298132.1|HVU298132 Hordeum vulgare mRNA for polyamine oxidase (bpao2 gene)
          Length = 1700

 Score =  743 bits (375), Expect = 0.0
 Identities = 387/391 (98%)
 Strand = Plus / Minus

                                                                        
Query: 146  aaaagcttccacgttaactgtgacacgcgtctgagtttattccatgacgatgcatgcgag 205
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1700 aaaagcttccacgttaactgtggcacgcgtctgagtttattccatgacgatgcatgcgag 1641

                                                                        
Query: 206  cagactggcatggcatctcaacttcctccttcatttagcctcagctttcagctcgtcgtc 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 cagactggcatggcatctcaacttcctccttcatttagcctcagctttcagctcgtcgtc 1581

                                                                        
Query: 266  atacttgggacggactttaaagtcgacgttgttgagggccttgttcatcagaatgtccgc 325
            ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 1580 atacttgggacggactttaaagtcgacgttgttggaggccttgttcatcagaatgtccgc 1521

                                                                        
Query: 326  ggagtgtatacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1520 ggagtgtatacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtg 1461

                                                                        
Query: 386  ctccccggtgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcg 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 ctccccggtgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcg 1401

                                                                        
Query: 446  gttgacgccgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcg 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 gttgacgccgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcg 1341

                                           
Query: 506  cggcacgtagatatcggtggcgtcggggacg 536
            | |||||||||||||||||||||||||||||
Sbjct: 1340 cagcacgtagatatcggtggcgtcggggacg 1310



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>emb|AJ234402.1|HVU234402 Hordeum vulgare partial mRNA; clone cMWG0647
          Length = 252

 Score =  379 bits (191), Expect = e-102
 Identities = 227/235 (96%), Gaps = 5/235 (2%)
 Strand = Plus / Minus

                                                                       
Query: 2   agtgtttttattcgatnaa-ttacaagaaattacatcactggaacgcttcaacaggaacc 60
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agtgtttttattcgatcaaattacaagaaattacatcactggaacgcttcaacaggaacc 178

                                                                       
Query: 61  acatactctcggagaatccaaacacgggaggcacgaaagaaagctggaacgtcacattat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 acatactctcggagaatccaaacacgggaggcacgaaagaaagctggaacgtcacattat 118

                                                                       
Query: 121 ttcgcctcacatcaaattcttggggaaaagcttccacgttaa-ctg--tgacacgcgtct 177
           |||||||||||||||||||||||||||||||||||||||||| |||  || ||||| |||
Sbjct: 117 ttcgcctcacatcaaattcttggggaaaagcttccacgttaacctgcttggcacgcvtct 58

                                                                  
Query: 178 gagtttatt-ccatgacgatgcatgcgagcagactggcatggcatctcaacttcc 231
           ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  gagtttattcccatgacgatgcatgcgagcagactggcatggcatctcaacttcc 3



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>emb|AJ304793.1|HVU304793 Hordeum vulgare bpao2 gene for flavin containing polyamine oxidase,
            exons 1-8
          Length = 4217

 Score =  339 bits (171), Expect = 6e-90
 Identities = 177/179 (98%)
 Strand = Plus / Minus

                                                                        
Query: 244  cctcagctttcagctcgtcgtcatacttgggacggactttaaagtcgacgttgttgaggg 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 3994 cctcagctttcagctcgtcgtcatacttgggacggactttaaagtcgacgttgttggagg 3935

                                                                        
Query: 304  ccttgttcatcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagc 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3934 ccttgttcatcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagc 3875

                                                                       
Query: 364  cattgtagtgctcgctggtgtgctccccggtgaagtagacccgcccgccaaccggcgcc 422
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3874 cattgtagtgctcgctggtgtgctccccggtgaagtagacccgcccgccaaccggcgcc 3816



 Score =  222 bits (112), Expect = 9e-55
 Identities = 115/116 (99%)
 Strand = Plus / Minus

                                                                        
Query: 421  cccggagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagccct 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3690 cccggagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagccct 3631

                                                                    
Query: 481  tgaagaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcggggacg 536
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3630 tgaagaatcggttggaccaccagcgcagcacgtagatatcggtggcgtcggggacg 3575



 Score =  192 bits (97), Expect = 8e-46
 Identities = 100/101 (99%)
 Strand = Plus / Minus

                                                                        
Query: 146  aaaagcttccacgttaactgtgacacgcgtctgagtttattccatgacgatgcatgcgag 205
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4217 aaaagcttccacgttaactgtggcacgcgtctgagtttattccatgacgatgcatgcgag 4158

                                                     
Query: 206  cagactggcatggcatctcaacttcctccttcatttagcct 246
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4157 cagactggcatggcatctcaacttcctccttcatttagcct 4117



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>emb|AJ298131.1|HVU298131 Hordeum vulgare mRNA for polyamine oxidase (bpao1 gene)
          Length = 1583

 Score =  204 bits (103), Expect = 2e-49
 Identities = 195/225 (86%), Gaps = 3/225 (1%)
 Strand = Plus / Minus

                                                                        
Query: 312  atcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtag 371
            ||||||||||| || ||||  ||||||| |||||||||||| |||||||| || ||||||
Sbjct: 1478 atcagaatgtctgcagagtcaatacctgaaagataagctccatggacataaccgttgtag 1419

                                                                        
Query: 372  tgctcgctggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctgg 431
            ||||||||||||||||||||||||||||| |||| ||||   ||||| |||| |||||||
Sbjct: 1418 tgctcgctggtgtgctccccggtgaagtaaaccctcccg---accggtgccctgagctgg 1362

                                                                        
Query: 432  tcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcgg 491
            ||||| ||||||||||||||||||||||||||||||||| ||| |||| || |||| | |
Sbjct: 1361 tcgtattcgtagcggttgacgccgatgggccagttggagaaggtgcccctgtagaacctg 1302

                                                         
Query: 492  ttggaccaccagcgcggcacgtagatatcggtggcgtcggggacg 536
            | ||||||||| || ||||||  ||| || || ||||||||||||
Sbjct: 1301 tcggaccaccaccgtggcacgaggatgtccgtcgcgtcggggacg 1257



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>ref|XM_450667.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1473

 Score =  178 bits (90), Expect = 1e-41
 Identities = 191/224 (85%), Gaps = 3/224 (1%)
 Strand = Plus / Minus

                                                                        
Query: 312  atcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtag 371
            |||||||| || || ||||  |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1418 atcagaatctctgcagagtcaatacctgcaagataagctccatggacatagccattgtag 1359

                                                                        
Query: 372  tgctcgctggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctgg 431
             ||||||| |||||||| ||||||||||| || | |   ||||||||||||| |||||||
Sbjct: 1358 cgctcgctcgtgtgctcaccggtgaagtacactctc---ccaaccggcgccctgagctgg 1302

                                                                        
Query: 432  tcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcgg 491
            || |||||||||||  ||||||||||||||||||||||| ||  ||||  |||||| | |
Sbjct: 1301 tcatactcgtagcgactgacgccgatgggccagttggagaagctgccccggaagaacctg 1242

                                                        
Query: 492  ttggaccaccagcgcggcacgtagatatcggtggcgtcggggac 535
            | ||||||||| | ||| |||  ||| |||||||||||||||||
Sbjct: 1241 tcggaccaccatctcgggacgaggatgtcggtggcgtcggggac 1198



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>emb|AJ002204.1|ZMJ002204 Zea mays mRNA for flavin containing polyamine oxidase (PAO)
          Length = 1750

 Score =  167 bits (84), Expect = 5e-38
 Identities = 188/222 (84%), Gaps = 3/222 (1%)
 Strand = Plus / Minus

                                                                        
Query: 315  agaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtagtgc 374
            ||||| || |||||||  ||||||| |||||| ||||| |||||||||||||||||||||
Sbjct: 1514 agaatttcagcggagtcgatacctgaaagataggctccatggacatagccattgtagtgc 1455

                                                                        
Query: 375  tcgctggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctggtcg 434
            |||||||||||||| ||||||||||| |||| |   |||||||| ||||  |||||||||
Sbjct: 1454 tcgctggtgtgctcgccggtgaagtataccctc---ccaaccggtgccctaagctggtcg 1398

                                                                        
Query: 435  tactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcggttg 494
            || ||||||||||||||||| |  |||||||||||| ||| ||||||| |||| | || |
Sbjct: 1397 tattcgtagcggttgacgccaactggccagttggagaaggtgcccttgtagaacctgtcg 1338

                                                      
Query: 495  gaccaccagcgcggcacgtagatatcggtggcgtcggggacg 536
            |||||||| | ||| ||   ||| ||||||||||| ||||||
Sbjct: 1337 gaccaccacctcgggacaaggatgtcggtggcgtccgggacg 1296



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>gb|AY107888.1| Zea mays PCO061908 mRNA sequence
          Length = 1895

 Score =  167 bits (84), Expect = 5e-38
 Identities = 188/222 (84%), Gaps = 3/222 (1%)
 Strand = Plus / Minus

                                                                        
Query: 315  agaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtagtgc 374
            ||||| || |||||||  ||||||| |||||| ||||| |||||||||||||||||||||
Sbjct: 1520 agaatttcagcggagtcgatacctgaaagataggctccatggacatagccattgtagtgc 1461

                                                                        
Query: 375  tcgctggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctggtcg 434
            |||||||||||||| ||||||||||| |||| |   |||||||| ||||  |||||||||
Sbjct: 1460 tcgctggtgtgctcgccggtgaagtataccctc---ccaaccggtgccctaagctggtcg 1404

                                                                        
Query: 435  tactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcggttg 494
            || ||||||||||||||||| |  |||||||||||| ||| ||||||| |||| | || |
Sbjct: 1403 tattcgtagcggttgacgccaactggccagttggagaaggtgcccttgtagaacctgtcg 1344

                                                      
Query: 495  gaccaccagcgcggcacgtagatatcggtggcgtcggggacg 536
            |||||||| | ||| ||   ||| ||||||||||| ||||||
Sbjct: 1343 gaccaccacctcgggacaaggatgtcggtggcgtccgggacg 1302



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>ref|XM_470573.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1044

 Score =  161 bits (81), Expect = 3e-36
 Identities = 164/191 (85%), Gaps = 3/191 (1%)
 Strand = Plus / Minus

                                                                       
Query: 312 atcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtag 371
           |||||||| ||||| ||||  ||||||||||||||| |||| ||||||||||||||||||
Sbjct: 989 atcagaatttccgcagagtcaatacctgcaagataacctccatggacatagccattgtag 930

                                                                       
Query: 372 tgctcgctggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctgg 431
           | |||||| |||||||| ||||||||||| |||| |    ||| ||| |||| |||||||
Sbjct: 929 tactcgcttgtgtgctcaccggtgaagtaaaccctc---tcaatcggggccctgagctgg 873

                                                                       
Query: 432 tcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcgg 491
           || || ||||||||||||||||| ||||||||||||||| ||| ||||||| |||| | |
Sbjct: 872 tcatattcgtagcggttgacgccaatgggccagttggagaaggtgcccttgtagaacctg 813

                      
Query: 492 ttggaccacca 502
           || ||||||||
Sbjct: 812 tttgaccacca 802



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>emb|AJ251568.1|ZMA251568 Zea mays PAO gene for flavin containing polyamine oxidase, exons 1-8
          Length = 4096

 Score =  159 bits (80), Expect = 1e-35
 Identities = 172/202 (85%), Gaps = 3/202 (1%)
 Strand = Plus / Minus

                                                                        
Query: 335  acctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccggt 394
            ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3900 acctgaaagataggctccatggacatagccattgtagtgctcgctggtgtgctcgccggt 3841

                                                                        
Query: 395  gaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgacgcc 454
            |||||| |||| |   |||||||| ||||  ||||||||||| |||||||||||||||||
Sbjct: 3840 gaagtataccctc---ccaaccggtgccctaagctggtcgtattcgtagcggttgacgcc 3784

                                                                        
Query: 455  gatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcacgta 514
             |  |||||||||||| ||| ||||||| |||| | || ||||||||| | ||| ||   
Sbjct: 3783 aactggccagttggagaaggtgcccttgtagaacctgtcggaccaccacctcgggacaag 3724

                                  
Query: 515  gatatcggtggcgtcggggacg 536
            ||| ||||||||||| ||||||
Sbjct: 3723 gatgtcggtggcgtccgggacg 3702



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>emb|AJ251018.1|ZMA251018 Zea mays pao gene for polyamine oxidase, exons 1-8, clone pMPAO2
          Length = 4344

 Score =  159 bits (80), Expect = 1e-35
 Identities = 172/202 (85%), Gaps = 3/202 (1%)
 Strand = Plus / Minus

                                                                        
Query: 335  acctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccggt 394
            ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4147 acctgaaagataggctccatggacatagccattgtagtgctcgctggtgtgctcaccggt 4088

                                                                        
Query: 395  gaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgacgcc 454
            |||||| |||| |   |||||||| ||||  ||||||||||| |||||||||||||||||
Sbjct: 4087 gaagtataccctc---ccaaccggtgccctaagctggtcgtattcgtagcggttgacgcc 4031

                                                                        
Query: 455  gatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcacgta 514
             |  |||||||||||| ||| ||||||| |||| | || ||||||||| | ||| ||   
Sbjct: 4030 aactggccagttggagaaggtgcccttgtagaacctgtcggaccaccatctcgggacaag 3971

                                  
Query: 515  gatatcggtggcgtcggggacg 536
            ||| ||||||||||| ||||||
Sbjct: 3970 gatgtcggtggcgtccgggacg 3949



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>ref|XM_450669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1588

 Score =  155 bits (78), Expect = 2e-34
 Identities = 173/204 (84%), Gaps = 3/204 (1%)
 Strand = Plus / Minus

                                                                        
Query: 333  atacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccg 392
            |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||
Sbjct: 1430 atacctgcaagataagctccatggacatagccattgtagcgctcgctcgtgtgctcaccg 1371

                                                                        
Query: 393  gtgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgacg 452
            ||||| ||||| | |   ||||||||||||| ||||||||| |  ||||||||  |||||
Sbjct: 1370 gtgaaatagactctc---ccaaccggcgccctgagctggtcatgttcgtagcgactgacg 1314

                                                                        
Query: 453  ccgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcacg 512
            |||||||||||||||||| ||  ||| | |||||| | ||  |||||||| | ||| |||
Sbjct: 1313 ccgatgggccagttggagaagctgccttggaagaacctgtccgaccaccatctcgggacg 1254

                                    
Query: 513  tagatatcggtggcgtcggggacg 536
              ||| ||||||||||||||||||
Sbjct: 1253 aggatgtcggtggcgtcggggacg 1230



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>dbj|AK069392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014L10, full
            insert sequence
          Length = 1587

 Score =  155 bits (78), Expect = 2e-34
 Identities = 173/204 (84%), Gaps = 3/204 (1%)
 Strand = Plus / Minus

                                                                        
Query: 333  atacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccg 392
            |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||
Sbjct: 1429 atacctgcaagataagctccatggacatagccattgtagcgctcgctcgtgtgctcaccg 1370

                                                                        
Query: 393  gtgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgacg 452
            ||||| ||||| | |   ||||||||||||| ||||||||| |  ||||||||  |||||
Sbjct: 1369 gtgaaatagactctc---ccaaccggcgccctgagctggtcatgttcgtagcgactgacg 1313

                                                                        
Query: 453  ccgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcacg 512
            |||||||||||||||||| ||  ||| | |||||| | ||  |||||||| | ||| |||
Sbjct: 1312 ccgatgggccagttggagaagctgccttggaagaacctgtccgaccaccatctcgggacg 1253

                                    
Query: 513  tagatatcggtggcgtcggggacg 536
              ||| ||||||||||||||||||
Sbjct: 1252 aggatgtcggtggcgtcggggacg 1229



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>emb|AJ251019.1|ZMA251019 Zea mays pao gene for polyamine oxidase, exons 1-8, clone pMPAO3
          Length = 3384

 Score =  151 bits (76), Expect = 3e-33
 Identities = 171/202 (84%), Gaps = 3/202 (1%)
 Strand = Plus / Minus

                                                                        
Query: 335  acctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccggt 394
            ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3188 acctgaaagataggctccatggacatagccattgtagtgctcgctggtgtgctcaccggt 3129

                                                                        
Query: 395  gaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgacgcc 454
            |||||| |||| |   |||||||| ||||  ||||||||||| |||||||||||||||||
Sbjct: 3128 gaagtataccctc---ccaaccggtgccctaagctggtcgtattcgtagcggttgacgcc 3072

                                                                        
Query: 455  gatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcacgta 514
             |  |||||||| ||| ||| ||||||| |||| | || ||||||||| | ||| ||   
Sbjct: 3071 aactggccagttagagaaggtgcccttgtagaacctgtcggaccaccacctcgggacaag 3012

                                  
Query: 515  gatatcggtggcgtcggggacg 536
            ||| ||||||||||| ||||||
Sbjct: 3011 gatgtcggtggcgtctgggacg 2990



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>emb|AJ304792.1|HVU304792 Hordeum vulgare bpao1 gene for flavin containing polyamine oxidase,
            exons 1-9
          Length = 2942

 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Minus

                                                                        
Query: 333  atacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccg 392
            ||||||| |||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 2711 atacctgaaagataagctccatggacataaccgttgtagtgctcgctggtgtgctccccg 2652

                              
Query: 393  gtgaagtagacccgcccg 410
            |||||||| |||| ||||
Sbjct: 2651 gtgaagtaaaccctcccg 2634



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                        
Query: 425  gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
            |||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| || |
Sbjct: 2490 gagctggtcgtattcgtagcggttgacgccgatgggccagttggagaaggtgcccctgta 2431

                                                                
Query: 485  gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcggggacg 536
            ||| | || ||||||||| || |||||   ||| || || ||||||||||||
Sbjct: 2430 gaacctgtcggaccaccaccgtggcactaggatgtccgtcgcgtcggggacg 2379



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  103 bits (52), Expect = 6e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                           
Query: 330     tgtatacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctcc 389
               |||||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||| 
Sbjct: 4848268 tgtatacctgcaagataacctccatggacatagccattgtagtactcgcttgtgtgctca 4848209

                               
Query: 390     ccggtgaagtagaccc 405
               ||||||||||| ||||
Sbjct: 4848208 ccggtgaagtaaaccc 4848193



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                           
Query: 425     gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
               ||||||||| || ||||||||||||||||| ||||||||||||||| ||| ||||||| |
Sbjct: 4848050 gagctggtcatattcgtagcggttgacgccaatgggccagttggagaaggtgcccttgta 4847991

                                 
Query: 485     gaatcggttggaccacca 502
               ||| | ||| ||||||||
Sbjct: 4847990 gaacctgtttgaccacca 4847973



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>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score =  103 bits (52), Expect = 6e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                          
Query: 330    tgtatacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctcc 389
              |||||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||| 
Sbjct: 147279 tgtatacctgcaagataacctccatggacatagccattgtagtactcgcttgtgtgctca 147338

                              
Query: 390    ccggtgaagtagaccc 405
              ||||||||||| ||||
Sbjct: 147339 ccggtgaagtaaaccc 147354



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                          
Query: 425    gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
              ||||||||| || ||||||||||||||||| ||||||||||||||| ||| ||||||| |
Sbjct: 147497 gagctggtcatattcgtagcggttgacgccaatgggccagttggagaaggtgcccttgta 147556

                                
Query: 485    gaatcggttggaccacca 502
              ||| | ||| ||||||||
Sbjct: 147557 gaacctgtttgaccacca 147574



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  103 bits (52), Expect = 6e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                            
Query: 333      atacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccg 392
                |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||
Sbjct: 12092784 atacctgcaagataagctccatggacatagccattgtagcgctcgctcgtgtgctcaccg 12092843

                        
Query: 393      gtgaagta 400
                ||||||||
Sbjct: 12092844 gtgaagta 12092851



 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                            
Query: 333      atacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccg 392
                |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||
Sbjct: 12113134 atacctgcaagataagctccatggacatagccattgtagcgctcgctcgtgtgctcaccg 12113193

                           
Query: 393      gtgaagtagac 403
                ||||| |||||
Sbjct: 12113194 gtgaaatagac 12113204



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 94/111 (84%)
 Strand = Plus / Plus

                                                                            
Query: 425      gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
                ||||||||| |||||||||||  ||||||||||||||||||||||| ||  ||||  |||
Sbjct: 12092982 gagctggtcatactcgtagcgactgacgccgatgggccagttggagaagctgccccggaa 12093041

                                                                   
Query: 485      gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcggggac 535
                ||| | || ||||||||| | ||| |||  ||| |||||||||||||||||
Sbjct: 12093042 gaacctgtcggaccaccatctcgggacgaggatgtcggtggcgtcggggac 12093092



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                            
Query: 425      gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
                ||||||||| |  ||||||||  ||||||||||||||||||||||| ||  ||| | |||
Sbjct: 12113376 gagctggtcatgttcgtagcgactgacgccgatgggccagttggagaagctgccttggaa 12113435

                                                                    
Query: 485      gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcggggacg 536
                ||| | ||  |||||||| | ||| |||  ||| ||||||||||||||||||
Sbjct: 12113436 gaacctgtccgaccaccatctcgggacgaggatgtcggtggcgtcggggacg 12113487



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  103 bits (52), Expect = 6e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                           
Query: 330     tgtatacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctcc 389
               |||||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||| 
Sbjct: 4847483 tgtatacctgcaagataacctccatggacatagccattgtagtactcgcttgtgtgctca 4847424

                               
Query: 390     ccggtgaagtagaccc 405
               ||||||||||| ||||
Sbjct: 4847423 ccggtgaagtaaaccc 4847408



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                           
Query: 425     gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
               ||||||||| || ||||||||||||||||| ||||||||||||||| ||| ||||||| |
Sbjct: 4847265 gagctggtcatattcgtagcggttgacgccaatgggccagttggagaaggtgcccttgta 4847206

                                 
Query: 485     gaatcggttggaccacca 502
               ||| | ||| ||||||||
Sbjct: 4847205 gaacctgtttgaccacca 4847188



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>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1759_F09
          Length = 149501

 Score =  103 bits (52), Expect = 6e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                        
Query: 333  atacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccg 392
            |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||
Sbjct: 4243 atacctgcaagataagctccatggacatagccattgtagcgctcgctcgtgtgctcaccg 4302

                    
Query: 393  gtgaagta 400
            ||||||||
Sbjct: 4303 gtgaagta 4310



 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                         
Query: 333   atacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccg 392
             |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||
Sbjct: 24593 atacctgcaagataagctccatggacatagccattgtagcgctcgctcgtgtgctcaccg 24652

                        
Query: 393   gtgaagtagac 403
             ||||| |||||
Sbjct: 24653 gtgaaatagac 24663



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 94/111 (84%)
 Strand = Plus / Plus

                                                                        
Query: 425  gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
            ||||||||| |||||||||||  ||||||||||||||||||||||| ||  ||||  |||
Sbjct: 4441 gagctggtcatactcgtagcgactgacgccgatgggccagttggagaagctgccccggaa 4500

                                                               
Query: 485  gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcggggac 535
            ||| | || ||||||||| | ||| |||  ||| |||||||||||||||||
Sbjct: 4501 gaacctgtcggaccaccatctcgggacgaggatgtcggtggcgtcggggac 4551



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                         
Query: 425   gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
             ||||||||| |  ||||||||  ||||||||||||||||||||||| ||  ||| | |||
Sbjct: 24835 gagctggtcatgttcgtagcgactgacgccgatgggccagttggagaagctgccttggaa 24894

                                                                 
Query: 485   gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcggggacg 536
             ||| | ||  |||||||| | ||| |||  ||| ||||||||||||||||||
Sbjct: 24895 gaacctgtccgaccaccatctcgggacgaggatgtcggtggcgtcggggacg 24946



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>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0564H06
          Length = 146823

 Score =  103 bits (52), Expect = 6e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                         
Query: 333   atacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccg 392
             |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||
Sbjct: 27163 atacctgcaagataagctccatggacatagccattgtagcgctcgctcgtgtgctcaccg 27222

                     
Query: 393   gtgaagta 400
             ||||||||
Sbjct: 27223 gtgaagta 27230



 Score =  101 bits (51), Expect = 2e-18
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                         
Query: 333   atacctgcaagataagctccgtggacatagccattgtagtgctcgctggtgtgctccccg 392
             |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||
Sbjct: 47513 atacctgcaagataagctccatggacatagccattgtagcgctcgctcgtgtgctcaccg 47572

                        
Query: 393   gtgaagtagac 403
             ||||| |||||
Sbjct: 47573 gtgaaatagac 47583



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 94/111 (84%)
 Strand = Plus / Plus

                                                                         
Query: 425   gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
             ||||||||| |||||||||||  ||||||||||||||||||||||| ||  ||||  |||
Sbjct: 27361 gagctggtcatactcgtagcgactgacgccgatgggccagttggagaagctgccccggaa 27420

                                                                
Query: 485   gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcggggac 535
             ||| | || ||||||||| | ||| |||  ||| |||||||||||||||||
Sbjct: 27421 gaacctgtcggaccaccatctcgggacgaggatgtcggtggcgtcggggac 27471



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                         
Query: 425   gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 484
             ||||||||| |  ||||||||  ||||||||||||||||||||||| ||  ||| | |||
Sbjct: 47755 gagctggtcatgttcgtagcgactgacgccgatgggccagttggagaagctgccttggaa 47814

                                                                 
Query: 485   gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcggggacg 536
             ||| | ||  |||||||| | ||| |||  ||| ||||||||||||||||||
Sbjct: 47815 gaacctgtccgaccaccatctcgggacgaggatgtcggtggcgtcggggacg 47866



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>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence, complete
             sequence
          Length = 106110

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 354   tggacatagccattgtagtgctcgctggtgtgctccccggtgaa 397
             |||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 41460 tggacatagccattgtagtgttcgcttgtgtgctcgcctgtgaa 41503



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 354      tggacatagccattgtagtgctcgctggtgtgctccccggtgaa 397
                |||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 11026776 tggacatagccattgtagtgttcgcttgtgtgctcgcctgtgaa 11026733



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 354      tggacatagccattgtagtgctcgctggtgtgctccccggtgaa 397
                |||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 11033216 tggacatagccattgtagtgttcgcttgtgtgctcgcctgtgaa 11033173



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>gb|AC110085.3| Homo sapiens BAC clone RP11-603P13 from 4, complete sequence
          Length = 80015

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   acatcaaattcttggggaaaa 149
             |||||||||||||||||||||
Sbjct: 19517 acatcaaattcttggggaaaa 19497



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>emb|AL928639.5| Mouse DNA sequence from clone RP23-446O17 on chromosome 2, complete
             sequence
          Length = 177843

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 459   ggccagttggagtaggagccc 479
             |||||||||||||||||||||
Sbjct: 67336 ggccagttggagtaggagccc 67356



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>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
             complete sequence
          Length = 139139

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   gacccgcccgccaaccggcg 420
             ||||||||||||||||||||
Sbjct: 41732 gacccgcccgccaaccggcg 41751



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>ref|XM_627096.1| Cryptosporidium parvum Iowa II mannose-6-phosphate isomerase
           (cgd8_1920), partial mRNA
          Length = 1731

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 19  aattacaagaaattacatca 38
           ||||||||||||||||||||
Sbjct: 445 aattacaagaaattacatca 426



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 401      gacccgcccgccaaccggcg 420
                ||||||||||||||||||||
Sbjct: 27677174 gacccgcccgccaaccggcg 27677193


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,468,153
Number of Sequences: 3902068
Number of extensions: 3468153
Number of successful extensions: 55862
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55665
Number of HSP's gapped (non-prelim): 175
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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