ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61c20 |
|---|---|
| Clone Library Name | barley_pub |
>ACPH_HUMAN (P13798) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) (Oxidized protein hydrolase) (OPH) (DNF15S2 protein) Length = 732 Score = 31.6 bits (70), Expect = 0.48 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = -1 Query: 395 IKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 294 ++ +++P+ TH + + +SF+N +W R HL Sbjct: 697 VRLLLYPKSTHALSEVEVESDSFMNAVLWLRTHL 730
>Y809_METJA (Q58219) Hypothetical protein MJ0809| Length = 167 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 14/89 (15%) Frame = +3 Query: 159 WEKYILVVDPQNASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEM------------- 299 ++KYI ++ ++ + +K + K+L + + + +LS D+LE+ Sbjct: 62 FKKYIERLEKKDKLIEIEKIE-EKRLNTYIEFPEGISRLSSDDILELNKKLDEGVKYIKL 120 Query: 300 -FPEPDSHVEEALEVRPRYIDFVRVLWEH 383 F E + H + LE++ ++ V +L EH Sbjct: 121 IFAELEEHKKVLLEIKDMHVKTVEILSEH 149
>NMT_AJECA (P34763) Glycylpeptide N-tetradecanoyltransferase (EC 2.3.1.97)| (Peptide N-myristoyltransferase) (Myristoyl-CoA:protein N-myristoyltransferase) (NMT) Length = 529 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -2 Query: 388 PSCSQRTRTKSIYRGRTSRASSTWESGSGNISSRSDPESFGSFLDIATELRSFLVILSFC 209 P+ SQ T + G+ + SS + + N +++ P S L++ LRS L + Sbjct: 28 PTTSQSTNASTGTAGKGEKKSSDGDPAAANPATKLTPSMAESLLELNPALRSELAGMDKE 87 Query: 208 EATEA 194 +ATEA Sbjct: 88 KATEA 92
>DHE4_SCHPO (P78804) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)| (NADP-GDH) (NADP-dependent glutamate dehydrogenase) Length = 451 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -2 Query: 361 KSIYRGRTSRASSTWESGSGNISSRSDPESFGSFLDIATELRS 233 ++I+ T AS +SGS NI S D + FL +AT +++ Sbjct: 404 QNIFEQSTDVASKYCDSGSNNIPSLVDGANIAGFLKVATAMQA 446
>APEH_MOUSE (Q8R146) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 29.6 bits (65), Expect = 1.8 Identities = 9/34 (26%), Positives = 20/34 (58%) Frame = -1 Query: 395 IKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 294 ++ +++P+ TH + + +SF+N +W HL Sbjct: 697 VRLLLYPKSTHALSEVEVESDSFMNTVLWLHTHL 730
>MYO7A_MOUSE (P97479) Myosin-7A (Myosin VIIa)| Length = 2215 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 178 LSILKMLQSPHRKTKSPRSFEVLWLCRG 261 + ILK L H + R +E+LWLC G Sbjct: 1815 VQILKQLTDNHIRYSEERGWELLWLCTG 1842
>MYO7A_HUMAN (Q13402) Myosin-7A (Myosin VIIa)| Length = 2215 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 178 LSILKMLQSPHRKTKSPRSFEVLWLCRG 261 + ILK L H + R +E+LWLC G Sbjct: 1815 VQILKQLTDNHIRYSEERGWELLWLCTG 1842
>LRRK2_MOUSE (Q5S006) Leucine-rich repeat serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 2527 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -2 Query: 301 NISSRSDPESFGSFLDIATELRSFLVILSFCEATEAF*GSTTSIYFSQ 158 N+S P G FL+ +++ SF ++F A A S TS+ SQ Sbjct: 1135 NLSKNHIPSLPGDFLEACSKVESFSARMNFLAAMPALPSSITSLKLSQ 1182
>MKL_MYCTU (P63357) Probable ribonucleotide transport ATP-binding protein mkl| Length = 359 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = -1 Query: 368 THEIDIPRSDFESFLNMGVWFRKHLKQI*PRE 273 TH I+I R+ + NMG+ FRKHL PRE Sbjct: 221 THNINIARTVPD---NMGMLFRKHLVMFGPRE 249
>MKL_MYCBO (P63358) Probable ribonucleotide transport ATP-binding protein mkl| Length = 359 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/32 (50%), Positives = 20/32 (62%) Frame = -1 Query: 368 THEIDIPRSDFESFLNMGVWFRKHLKQI*PRE 273 TH I+I R+ + NMG+ FRKHL PRE Sbjct: 221 THNINIARTVPD---NMGMLFRKHLVMFGPRE 249
>HAM1_CHLTE (Q8KFJ6) HAM1 protein homolog| Length = 226 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +3 Query: 213 KDKITKKLRSSVAMSRKLPKLSGSDLLEMFPEPDSHVEEALEVRPR 350 K K T + R+ +AM +LP +GS +E+ D H++ + P+ Sbjct: 127 KSKRTARFRTVIAMKGRLPAANGS-AVEIEETTDGHIDGLITTEPK 171
>ACPH_RAT (P13676) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 28.9 bits (63), Expect = 3.1 Identities = 8/34 (23%), Positives = 20/34 (58%) Frame = -1 Query: 395 IKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 294 ++ +++P+ H + ++ +SF+N +W HL Sbjct: 697 VRLLLYPKSNHALSEVEAESDSFMNAVLWLHTHL 730
>CCD93_CHICK (Q5ZKI4) Coiled-coil domain-containing protein 93| Length = 617 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Frame = +3 Query: 189 QNASVASQKDKITKKLRSSVAMSRKLP------KLSGSDLLEMFPEPDSHVEEALEVRPR 350 Q S QK +T+K+ SV K P ++ G D + +FP V+ A+E R Sbjct: 75 QENSTIGQKIALTEKI-VSVLPKMKCPHRLEPHQIQGLDFIHIFPVVQWLVKRAIETREE 133 Query: 351 YIDFVR 368 D++R Sbjct: 134 MGDYIR 139
>MKL_MYCLE (P30769) Probable ribonucleotide transport ATP-binding protein mkl| Length = 347 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -1 Query: 368 THEIDIPRSDFESFLNMGVWFRKHLKQI*PRE 273 TH ++I R+ + NMG+ FRKHL PRE Sbjct: 209 THNVNIARTVPD---NMGMLFRKHLVMFGPRE 237
>ACPH_PIG (P19205) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)| (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase) Length = 732 Score = 28.5 bits (62), Expect = 4.0 Identities = 9/34 (26%), Positives = 20/34 (58%) Frame = -1 Query: 395 IKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 294 ++ +++P+ TH + + +SF+N +W HL Sbjct: 697 VRLLLYPKSTHALSEVEVESDSFMNAVLWLCTHL 730
>CCD93_XENTR (Q640U7) Coiled-coil domain-containing protein 93| Length = 610 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Frame = +3 Query: 189 QNASVASQKDKITKKLRSSVAMSRKLP------KLSGSDLLEMFPEPDSHVEEALEVRPR 350 Q S QK +T+K+ SV K P ++ G D + +FP V+ A+E R Sbjct: 70 QENSTIGQKIALTEKI-VSVLPKMKCPHRLEPHQIQGLDFIHIFPVIQWLVKRAIETRQE 128 Query: 351 YIDFVR 368 D++R Sbjct: 129 MGDYIR 134
>DSPA_SYNY3 (P20169) Drug sensory protein A (EC 2.7.13.3)| Length = 663 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = -1 Query: 398 EIKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHLKQI*PREFRELPRH-SHRTSKLLGD 222 E K +HE+ P + +SF+ F + L ++ +EF E H + R S+L+ D Sbjct: 421 EAKSQFISNVSHELRTPLFNIKSFIETLSEFGEDLSEVERKEFLETANHETDRLSRLVND 480 Query: 221 FVFL 210 + L Sbjct: 481 VLDL 484
>ORAI1_HUMAN (Q96D31) Protein orai-1| Length = 301 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +2 Query: 122 AVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQ 229 AVHFY+SL +H + F+RL ++ +H+ Sbjct: 254 AVHFYRSLVSHKTDRQFQELNELAEFARLQDQLDHR 289
>ORAI1_RAT (Q5M848) Protein orai-1| Length = 304 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +2 Query: 122 AVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQ 229 AVHFY+SL +H + F+RL ++ +H+ Sbjct: 257 AVHFYRSLVSHKTDRQFQELNELAEFARLQDQLDHR 292
>ORAI1_MOUSE (Q8BWG9) Protein orai-1| Length = 304 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +2 Query: 122 AVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQ 229 AVHFY+SL +H + F+RL ++ +H+ Sbjct: 257 AVHFYRSLVSHKTDRQFQELNELAEFARLQDQLDHR 292
>CCD93_XENLA (Q6GQI5) Coiled-coil domain-containing protein 93| Length = 609 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Frame = +3 Query: 189 QNASVASQKDKITKKLRSSVAMSRKLP------KLSGSDLLEMFPEPDSHVEEALEVRPR 350 Q S QK +T+K+ SV K P ++ G D + +FP V+ A+E R Sbjct: 70 QENSTIGQKIALTEKI-VSVLPKMKCPHRLEPHQIQGLDFIHIFPVIQWLVKRAIETRQE 128 Query: 351 YIDFVR 368 D++R Sbjct: 129 MGDYIR 134
>DYNA_XENLA (Q6PCJ1) Dynactin-1| Length = 1232 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/68 (27%), Positives = 35/68 (51%) Frame = +2 Query: 56 LLHKQKPNSHCPGCVNQ*PQTDAVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQEA 235 LLHK + + VN P T A+ +YQ LY+ +L + ++ +C +L++ ++ Sbjct: 663 LLHKDQLDE----TVNVEPLTKAIKYYQHLYSIHLAD-----QAEECTMQLSDHIKFTQS 713 Query: 236 SKFCGYVE 259 + C VE Sbjct: 714 ALDCMGVE 721
>DYNA_CHICK (P35458) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1224 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/68 (29%), Positives = 33/68 (48%) Frame = +2 Query: 56 LLHKQKPNSHCPGCVNQ*PQTDAVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQEA 235 LLHK + + VN P T A+ +YQ LY+ +L E ++ C +L + ++ Sbjct: 698 LLHKDQLDE----TVNVEPLTKAIKYYQHLYSIHLAE-----QAEDCTMQLADHIKFTQS 748 Query: 236 SKFCGYVE 259 + C VE Sbjct: 749 ALDCMGVE 756
>SYL2_SULTO (Q970Z6) Leucyl-tRNA synthetase 2 (EC 6.1.1.4) (Leucine--tRNA| ligase 2) (LeuRS 2) Length = 944 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Frame = +3 Query: 159 WEKYILVVDPQNASVASQKDKITKKLRSSVAMSR----------KLPKLSGSDLLEMFPE 308 W K I V N V + K++K LR+ + + + ++ S +D+ Sbjct: 605 WPKAIAV----NGFVLYEGKKMSKSLRNIIPLRKALRIYSPDVVRIALTSTADMGSDVNF 660 Query: 309 PDSHVEEALEVRPRYIDFVRVLWEHDG 389 DS+ + E+ RY +F++ L ++DG Sbjct: 661 SDSYAKSVGEILRRYYEFIKELPKYDG 687
>DNMT1_ARATH (P34881) DNA (cytosine-5)-methyltransferase AthI (EC 2.1.1.37) (DNA| methyltransferase AthI) (DNA Metase AthI) (M.AthI) Length = 1534 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = +3 Query: 195 ASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEMFPEPDSHVEEAL 335 AS D +K R+SVA+ +KL K SG D PD +EE L Sbjct: 169 ASYRKVYDYFYEKARASVAVYKKLSKSSGGD-------PDIGLEELL 208
>CILP1_HUMAN (O75339) Cartilage intermediate layer protein 1 precursor (CILP-1)| (Cartilage intermediate-layer protein) [Contains: Cartilage intermediate layer protein 1 C1; Cartilage intermediate layer protein 1 C2] Length = 1184 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Frame = -2 Query: 385 SCSQRTRTKSIYRGRTSRASSTWESGSGNI---SSRSDPESFGSFLDIATELRSFLVILS 215 SC + T T+SI RGR S A + G++ +SR + + + ++L+ Sbjct: 481 SCQRCTETRSIVRGRVSAADNGEPMRFGHVYMGNSRVSMTGYKGTFTLHVPQDTERLVLT 540 Query: 214 FCEATEAF*GSTTSIYFSQ 158 F + + F +T + F++ Sbjct: 541 FVDRLQKFVNTTKVLPFNK 559
>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) (p135) Length = 1278 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +2 Query: 56 LLHKQKPNSHCPGCVNQ*PQTDAVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQEA 235 LLHK + + VN P T A+ +YQ LY+ +L E + C +L + ++ Sbjct: 705 LLHKDQLDE----TVNVEPLTKAIKYYQHLYSIHLAE-----QPEDCTMQLADHIKFTQS 755 Query: 236 SKFCGYVE 259 + C VE Sbjct: 756 ALDCMSVE 763
>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)| (CDC2-related protein kinase 5) (Cholinesterase-related cell division controller) Length = 1512 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +3 Query: 192 NASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEMFPE 308 N SV + K ++ KKLR +A P+L G D L PE Sbjct: 628 NISVKAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPE 666
>PLCB2_RAT (O89040) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 2 (EC 3.1.4.11) (Phospholipase C-beta-2) (PLC-beta-2) Length = 1183 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +3 Query: 192 NASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEMFPEPDSHVEEAL 335 NAS ++ DKI KL+ ++ K+P + +MFP VE AL Sbjct: 141 NASRSTFLDKILVKLKMQLSPEGKIPV---KNFFQMFPADRKRVEAAL 185
>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)| (CDC2-related protein kinase 5) Length = 1511 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +3 Query: 192 NASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEMFPE 308 N SV + K ++ KKLR +A P+L G D L PE Sbjct: 628 NISVKAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPE 666
>FBX38_MOUSE (Q8BMI0) F-box only protein 38 (Modulator of KLF7 activity) (MoKA)| Length = 1194 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -2 Query: 379 SQRTRTKSIYRGRTSRASSTWESGSGNISSRSDPESFGSFLDIAT 245 S++ ++K +Y +S +SST S +GN SS S F T Sbjct: 694 SEKKKSKDVYPSCSSSSSSTAASTAGNASSPSTASQSPDFARTVT 738 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,677,204 Number of Sequences: 219361 Number of extensions: 969980 Number of successful extensions: 3247 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3194 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3247 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
