ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61c20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACPH_HUMAN (P13798) Acylamino-acid-releasing enzyme (EC 3.4.19.1... 32 0.48
2Y809_METJA (Q58219) Hypothetical protein MJ0809 30 1.1
3NMT_AJECA (P34763) Glycylpeptide N-tetradecanoyltransferase (EC ... 30 1.4
4DHE4_SCHPO (P78804) NADP-specific glutamate dehydrogenase (EC 1.... 30 1.8
5APEH_MOUSE (Q8R146) Acylamino-acid-releasing enzyme (EC 3.4.19.1... 30 1.8
6MYO7A_MOUSE (P97479) Myosin-7A (Myosin VIIa) 29 2.4
7MYO7A_HUMAN (Q13402) Myosin-7A (Myosin VIIa) 29 2.4
8LRRK2_MOUSE (Q5S006) Leucine-rich repeat serine/threonine-protei... 29 2.4
9MKL_MYCTU (P63357) Probable ribonucleotide transport ATP-binding... 29 3.1
10MKL_MYCBO (P63358) Probable ribonucleotide transport ATP-binding... 29 3.1
11HAM1_CHLTE (Q8KFJ6) HAM1 protein homolog 29 3.1
12ACPH_RAT (P13676) Acylamino-acid-releasing enzyme (EC 3.4.19.1) ... 29 3.1
13CCD93_CHICK (Q5ZKI4) Coiled-coil domain-containing protein 93 28 4.0
14MKL_MYCLE (P30769) Probable ribonucleotide transport ATP-binding... 28 4.0
15ACPH_PIG (P19205) Acylamino-acid-releasing enzyme (EC 3.4.19.1) ... 28 4.0
16CCD93_XENTR (Q640U7) Coiled-coil domain-containing protein 93 28 5.3
17DSPA_SYNY3 (P20169) Drug sensory protein A (EC 2.7.13.3) 28 5.3
18ORAI1_HUMAN (Q96D31) Protein orai-1 28 5.3
19ORAI1_RAT (Q5M848) Protein orai-1 28 5.3
20ORAI1_MOUSE (Q8BWG9) Protein orai-1 28 5.3
21CCD93_XENLA (Q6GQI5) Coiled-coil domain-containing protein 93 28 5.3
22DYNA_XENLA (Q6PCJ1) Dynactin-1 28 6.9
23DYNA_CHICK (P35458) Dynactin-1 (150 kDa dynein-associated polype... 28 6.9
24SYL2_SULTO (Q970Z6) Leucyl-tRNA synthetase 2 (EC 6.1.1.4) (Leuci... 28 6.9
25DNMT1_ARATH (P34881) DNA (cytosine-5)-methyltransferase AthI (EC... 28 6.9
26CILP1_HUMAN (O75339) Cartilage intermediate layer protein 1 prec... 28 6.9
27DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polype... 27 9.0
28CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5... 27 9.0
29PLCB2_RAT (O89040) 1-phosphatidylinositol-4,5-bisphosphate phosp... 27 9.0
30CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5... 27 9.0
31FBX38_MOUSE (Q8BMI0) F-box only protein 38 (Modulator of KLF7 ac... 27 9.0

>ACPH_HUMAN (P13798) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
           (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
           (Oxidized protein hydrolase) (OPH) (DNF15S2 protein)
          Length = 732

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = -1

Query: 395 IKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 294
           ++ +++P+ TH +     + +SF+N  +W R HL
Sbjct: 697 VRLLLYPKSTHALSEVEVESDSFMNAVLWLRTHL 730



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>Y809_METJA (Q58219) Hypothetical protein MJ0809|
          Length = 167

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
 Frame = +3

Query: 159 WEKYILVVDPQNASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEM------------- 299
           ++KYI  ++ ++  +  +K +  K+L + +     + +LS  D+LE+             
Sbjct: 62  FKKYIERLEKKDKLIEIEKIE-EKRLNTYIEFPEGISRLSSDDILELNKKLDEGVKYIKL 120

Query: 300 -FPEPDSHVEEALEVRPRYIDFVRVLWEH 383
            F E + H +  LE++  ++  V +L EH
Sbjct: 121 IFAELEEHKKVLLEIKDMHVKTVEILSEH 149



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>NMT_AJECA (P34763) Glycylpeptide N-tetradecanoyltransferase (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase) (Myristoyl-CoA:protein
           N-myristoyltransferase) (NMT)
          Length = 529

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = -2

Query: 388 PSCSQRTRTKSIYRGRTSRASSTWESGSGNISSRSDPESFGSFLDIATELRSFLVILSFC 209
           P+ SQ T   +   G+  + SS  +  + N +++  P    S L++   LRS L  +   
Sbjct: 28  PTTSQSTNASTGTAGKGEKKSSDGDPAAANPATKLTPSMAESLLELNPALRSELAGMDKE 87

Query: 208 EATEA 194
           +ATEA
Sbjct: 88  KATEA 92



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>DHE4_SCHPO (P78804) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)|
           (NADP-GDH) (NADP-dependent glutamate dehydrogenase)
          Length = 451

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 361 KSIYRGRTSRASSTWESGSGNISSRSDPESFGSFLDIATELRS 233
           ++I+   T  AS   +SGS NI S  D  +   FL +AT +++
Sbjct: 404 QNIFEQSTDVASKYCDSGSNNIPSLVDGANIAGFLKVATAMQA 446



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>APEH_MOUSE (Q8R146) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
           (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -1

Query: 395 IKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 294
           ++ +++P+ TH +     + +SF+N  +W   HL
Sbjct: 697 VRLLLYPKSTHALSEVEVESDSFMNTVLWLHTHL 730



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>MYO7A_MOUSE (P97479) Myosin-7A (Myosin VIIa)|
          Length = 2215

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 178  LSILKMLQSPHRKTKSPRSFEVLWLCRG 261
            + ILK L   H +    R +E+LWLC G
Sbjct: 1815 VQILKQLTDNHIRYSEERGWELLWLCTG 1842



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>MYO7A_HUMAN (Q13402) Myosin-7A (Myosin VIIa)|
          Length = 2215

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 178  LSILKMLQSPHRKTKSPRSFEVLWLCRG 261
            + ILK L   H +    R +E+LWLC G
Sbjct: 1815 VQILKQLTDNHIRYSEERGWELLWLCTG 1842



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>LRRK2_MOUSE (Q5S006) Leucine-rich repeat serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 2527

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 301  NISSRSDPESFGSFLDIATELRSFLVILSFCEATEAF*GSTTSIYFSQ 158
            N+S    P   G FL+  +++ SF   ++F  A  A   S TS+  SQ
Sbjct: 1135 NLSKNHIPSLPGDFLEACSKVESFSARMNFLAAMPALPSSITSLKLSQ 1182



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>MKL_MYCTU (P63357) Probable ribonucleotide transport ATP-binding protein mkl|
          Length = 359

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -1

Query: 368 THEIDIPRSDFESFLNMGVWFRKHLKQI*PRE 273
           TH I+I R+  +   NMG+ FRKHL    PRE
Sbjct: 221 THNINIARTVPD---NMGMLFRKHLVMFGPRE 249



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>MKL_MYCBO (P63358) Probable ribonucleotide transport ATP-binding protein mkl|
          Length = 359

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -1

Query: 368 THEIDIPRSDFESFLNMGVWFRKHLKQI*PRE 273
           TH I+I R+  +   NMG+ FRKHL    PRE
Sbjct: 221 THNINIARTVPD---NMGMLFRKHLVMFGPRE 249



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>HAM1_CHLTE (Q8KFJ6) HAM1 protein homolog|
          Length = 226

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 213 KDKITKKLRSSVAMSRKLPKLSGSDLLEMFPEPDSHVEEALEVRPR 350
           K K T + R+ +AM  +LP  +GS  +E+    D H++  +   P+
Sbjct: 127 KSKRTARFRTVIAMKGRLPAANGS-AVEIEETTDGHIDGLITTEPK 171



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>ACPH_RAT (P13676) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
           (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = -1

Query: 395 IKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 294
           ++ +++P+  H +    ++ +SF+N  +W   HL
Sbjct: 697 VRLLLYPKSNHALSEVEAESDSFMNAVLWLHTHL 730



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>CCD93_CHICK (Q5ZKI4) Coiled-coil domain-containing protein 93|
          Length = 617

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = +3

Query: 189 QNASVASQKDKITKKLRSSVAMSRKLP------KLSGSDLLEMFPEPDSHVEEALEVRPR 350
           Q  S   QK  +T+K+  SV    K P      ++ G D + +FP     V+ A+E R  
Sbjct: 75  QENSTIGQKIALTEKI-VSVLPKMKCPHRLEPHQIQGLDFIHIFPVVQWLVKRAIETREE 133

Query: 351 YIDFVR 368
             D++R
Sbjct: 134 MGDYIR 139



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>MKL_MYCLE (P30769) Probable ribonucleotide transport ATP-binding protein mkl|
          Length = 347

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -1

Query: 368 THEIDIPRSDFESFLNMGVWFRKHLKQI*PRE 273
           TH ++I R+  +   NMG+ FRKHL    PRE
Sbjct: 209 THNVNIARTVPD---NMGMLFRKHLVMFGPRE 237



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>ACPH_PIG (P19205) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
           (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -1

Query: 395 IKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHL 294
           ++ +++P+ TH +     + +SF+N  +W   HL
Sbjct: 697 VRLLLYPKSTHALSEVEVESDSFMNAVLWLCTHL 730



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>CCD93_XENTR (Q640U7) Coiled-coil domain-containing protein 93|
          Length = 610

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = +3

Query: 189 QNASVASQKDKITKKLRSSVAMSRKLP------KLSGSDLLEMFPEPDSHVEEALEVRPR 350
           Q  S   QK  +T+K+  SV    K P      ++ G D + +FP     V+ A+E R  
Sbjct: 70  QENSTIGQKIALTEKI-VSVLPKMKCPHRLEPHQIQGLDFIHIFPVIQWLVKRAIETRQE 128

Query: 351 YIDFVR 368
             D++R
Sbjct: 129 MGDYIR 134



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>DSPA_SYNY3 (P20169) Drug sensory protein A (EC 2.7.13.3)|
          Length = 663

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -1

Query: 398 EIKXIMFPEDTHEIDIPRSDFESFLNMGVWFRKHLKQI*PREFRELPRH-SHRTSKLLGD 222
           E K       +HE+  P  + +SF+     F + L ++  +EF E   H + R S+L+ D
Sbjct: 421 EAKSQFISNVSHELRTPLFNIKSFIETLSEFGEDLSEVERKEFLETANHETDRLSRLVND 480

Query: 221 FVFL 210
            + L
Sbjct: 481 VLDL 484



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>ORAI1_HUMAN (Q96D31) Protein orai-1|
          Length = 301

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 122 AVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQ 229
           AVHFY+SL +H     +        F+RL ++ +H+
Sbjct: 254 AVHFYRSLVSHKTDRQFQELNELAEFARLQDQLDHR 289



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>ORAI1_RAT (Q5M848) Protein orai-1|
          Length = 304

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 122 AVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQ 229
           AVHFY+SL +H     +        F+RL ++ +H+
Sbjct: 257 AVHFYRSLVSHKTDRQFQELNELAEFARLQDQLDHR 292



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>ORAI1_MOUSE (Q8BWG9) Protein orai-1|
          Length = 304

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 122 AVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQ 229
           AVHFY+SL +H     +        F+RL ++ +H+
Sbjct: 257 AVHFYRSLVSHKTDRQFQELNELAEFARLQDQLDHR 292



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>CCD93_XENLA (Q6GQI5) Coiled-coil domain-containing protein 93|
          Length = 609

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = +3

Query: 189 QNASVASQKDKITKKLRSSVAMSRKLP------KLSGSDLLEMFPEPDSHVEEALEVRPR 350
           Q  S   QK  +T+K+  SV    K P      ++ G D + +FP     V+ A+E R  
Sbjct: 70  QENSTIGQKIALTEKI-VSVLPKMKCPHRLEPHQIQGLDFIHIFPVIQWLVKRAIETRQE 128

Query: 351 YIDFVR 368
             D++R
Sbjct: 129 MGDYIR 134



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>DYNA_XENLA (Q6PCJ1) Dynactin-1|
          Length = 1232

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/68 (27%), Positives = 35/68 (51%)
 Frame = +2

Query: 56  LLHKQKPNSHCPGCVNQ*PQTDAVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQEA 235
           LLHK + +      VN  P T A+ +YQ LY+ +L +     ++ +C  +L++     ++
Sbjct: 663 LLHKDQLDE----TVNVEPLTKAIKYYQHLYSIHLAD-----QAEECTMQLSDHIKFTQS 713

Query: 236 SKFCGYVE 259
           +  C  VE
Sbjct: 714 ALDCMGVE 721



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>DYNA_CHICK (P35458) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1224

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/68 (29%), Positives = 33/68 (48%)
 Frame = +2

Query: 56  LLHKQKPNSHCPGCVNQ*PQTDAVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQEA 235
           LLHK + +      VN  P T A+ +YQ LY+ +L E     ++  C  +L +     ++
Sbjct: 698 LLHKDQLDE----TVNVEPLTKAIKYYQHLYSIHLAE-----QAEDCTMQLADHIKFTQS 748

Query: 236 SKFCGYVE 259
           +  C  VE
Sbjct: 749 ALDCMGVE 756



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>SYL2_SULTO (Q970Z6) Leucyl-tRNA synthetase 2 (EC 6.1.1.4) (Leucine--tRNA|
           ligase 2) (LeuRS 2)
          Length = 944

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
 Frame = +3

Query: 159 WEKYILVVDPQNASVASQKDKITKKLRSSVAMSR----------KLPKLSGSDLLEMFPE 308
           W K I V    N  V  +  K++K LR+ + + +          ++   S +D+      
Sbjct: 605 WPKAIAV----NGFVLYEGKKMSKSLRNIIPLRKALRIYSPDVVRIALTSTADMGSDVNF 660

Query: 309 PDSHVEEALEVRPRYIDFVRVLWEHDG 389
            DS+ +   E+  RY +F++ L ++DG
Sbjct: 661 SDSYAKSVGEILRRYYEFIKELPKYDG 687



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>DNMT1_ARATH (P34881) DNA (cytosine-5)-methyltransferase AthI (EC 2.1.1.37) (DNA|
           methyltransferase AthI) (DNA Metase AthI) (M.AthI)
          Length = 1534

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +3

Query: 195 ASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEMFPEPDSHVEEAL 335
           AS     D   +K R+SVA+ +KL K SG D       PD  +EE L
Sbjct: 169 ASYRKVYDYFYEKARASVAVYKKLSKSSGGD-------PDIGLEELL 208



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>CILP1_HUMAN (O75339) Cartilage intermediate layer protein 1 precursor (CILP-1)|
           (Cartilage intermediate-layer protein) [Contains:
           Cartilage intermediate layer protein 1 C1; Cartilage
           intermediate layer protein 1 C2]
          Length = 1184

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = -2

Query: 385 SCSQRTRTKSIYRGRTSRASSTWESGSGNI---SSRSDPESFGSFLDIATELRSFLVILS 215
           SC + T T+SI RGR S A +      G++   +SR     +     +     +  ++L+
Sbjct: 481 SCQRCTETRSIVRGRVSAADNGEPMRFGHVYMGNSRVSMTGYKGTFTLHVPQDTERLVLT 540

Query: 214 FCEATEAF*GSTTSIYFSQ 158
           F +  + F  +T  + F++
Sbjct: 541 FVDRLQKFVNTTKVLPFNK 559



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>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued) (p135)
          Length = 1278

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = +2

Query: 56  LLHKQKPNSHCPGCVNQ*PQTDAVHFYQSLYAHNLGEIYTSCRSSKCFSRLTERQNHQEA 235
           LLHK + +      VN  P T A+ +YQ LY+ +L E     +   C  +L +     ++
Sbjct: 705 LLHKDQLDE----TVNVEPLTKAIKYYQHLYSIHLAE-----QPEDCTMQLADHIKFTQS 755

Query: 236 SKFCGYVE 259
           +  C  VE
Sbjct: 756 ALDCMSVE 763



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>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5) (Cholinesterase-related
           cell division controller)
          Length = 1512

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 192 NASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEMFPE 308
           N SV + K ++ KKLR  +A     P+L G D L   PE
Sbjct: 628 NISVKAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPE 666



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>PLCB2_RAT (O89040) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           beta 2 (EC 3.1.4.11) (Phospholipase C-beta-2)
           (PLC-beta-2)
          Length = 1183

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +3

Query: 192 NASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEMFPEPDSHVEEAL 335
           NAS ++  DKI  KL+  ++   K+P     +  +MFP     VE AL
Sbjct: 141 NASRSTFLDKILVKLKMQLSPEGKIPV---KNFFQMFPADRKRVEAAL 185



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>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5)
          Length = 1511

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 192 NASVASQKDKITKKLRSSVAMSRKLPKLSGSDLLEMFPE 308
           N SV + K ++ KKLR  +A     P+L G D L   PE
Sbjct: 628 NISVKAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPE 666



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>FBX38_MOUSE (Q8BMI0) F-box only protein 38 (Modulator of KLF7 activity) (MoKA)|
          Length = 1194

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 379 SQRTRTKSIYRGRTSRASSTWESGSGNISSRSDPESFGSFLDIAT 245
           S++ ++K +Y   +S +SST  S +GN SS S       F    T
Sbjct: 694 SEKKKSKDVYPSCSSSSSSTAASTAGNASSPSTASQSPDFARTVT 738


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,677,204
Number of Sequences: 219361
Number of extensions: 969980
Number of successful extensions: 3247
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3247
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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