ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbah61c19 |
|---|---|
| Clone Library Name | barley_pub |
>DKGB_CORSS (P15339) 2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274)| (2,5-DKG reductase B) (2,5-DKGR B) (25DKGR-B) (AKR5D) Length = 276 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/62 (38%), Positives = 36/62 (58%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 ++E+ V YG PTQV L W G+ PIP + + + E A G++LTAD+V+ + L Sbjct: 202 LQELAVVYGVTPTQVVLRWHVQLGST-PIPKSADPDRQRENADVFGFALTADQVDAISGL 260 Query: 353 AR 348 R Sbjct: 261 ER 262
>YAKC_SCHPO (Q09923) Aldo-keto reductase yakc [NADP+] (EC 1.1.1.-)| Length = 340 Score = 42.7 bits (99), Expect = 7e-04 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Frame = -3 Query: 545 LMNRIKEIGVSYGKNPTQVSLNWLTCQG-NVVPIPGAKNAGQAMEFAGALGWSLTADEVE 369 L+ +I++I + P Q+SL WL QG +++PIPG K E GAL L+ V+ Sbjct: 248 LVTKIEKIATANNITPGQLSLAWLLAQGDDILPIPGTKRVKYLEENFGALKVKLSDATVK 307 Query: 368 ELRTLA--REIKGIKMP 324 E+R E+ G + P Sbjct: 308 EIREACDNAEVIGARYP 324
>Y2320_MYCBO (P63485) Hypothetical protein Mb2320| Length = 323 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/77 (31%), Positives = 36/77 (46%) Frame = -3 Query: 563 LTKLQPLMNRIKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLT 384 L +++PL+ ++ I V P QV+L WL VV IPGA + Q A L+ Sbjct: 230 LRRIEPLLATLRAIAVDVDAKPAQVALAWLISLPGVVAIPGASSVEQLEFNVAAADIELS 289 Query: 383 ADEVEELRTLAREIKGI 333 A + L AR + + Sbjct: 290 AQSRDALTDAARAFRPV 306
>Y2298_MYCTU (P63484) Hypothetical protein Rv2298/MT2355| Length = 323 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/77 (31%), Positives = 36/77 (46%) Frame = -3 Query: 563 LTKLQPLMNRIKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLT 384 L +++PL+ ++ I V P QV+L WL VV IPGA + Q A L+ Sbjct: 230 LRRIEPLLATLRAIAVDVDAKPAQVALAWLISLPGVVAIPGASSVEQLEFNVAAADIELS 289 Query: 383 ADEVEELRTLAREIKGI 333 A + L AR + + Sbjct: 290 AQSRDALTDAARAFRPV 306
>XYL1_ASPNG (Q9P8R5) NAD(P)H-dependent D-xylose reductase (EC 1.1.1.-) (XR)| Length = 319 Score = 40.0 bits (92), Expect = 0.005 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 +K I +G+ P QV L W T +G + IP + N + + GW+L +E++ + L Sbjct: 242 VKSIAEKHGRTPAQVLLRWATQRG-IAVIPKSNNPQRLKQNLDVTGWNLEEEEIKAISGL 300 Query: 353 AREIK 339 R ++ Sbjct: 301 DRGLR 305
>XYL2_CANTR (P87039) NADPH-dependent D-xylose reductase II,III (EC 1.1.1.-)| (XR) Length = 324 Score = 38.9 bits (89), Expect = 0.010 Identities = 20/60 (33%), Positives = 32/60 (53%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 IK I +GK+P QV L W T Q N+ IP + N + + + + LT D+++ + L Sbjct: 247 IKSIADKHGKSPAQVLLRWAT-QRNIAVIPKSNNPERLAQNLSVVDFDLTKDDLDNIAKL 305
>XYL1_CANTR (O13283) NAD(P)H-dependent D-xylose reductase I,II (EC 1.1.1.-)| (XR) Length = 324 Score = 37.7 bits (86), Expect = 0.023 Identities = 20/60 (33%), Positives = 32/60 (53%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 IK I +GK+P QV L W T Q N+ IP + N + + + + LT D+++ + L Sbjct: 247 IKLIADKHGKSPAQVLLRWAT-QRNIAVIPKSNNPERLAQNLSVVDFDLTKDDLDNIAKL 305
>PLR1_SCHPO (O14295) Pyridoxal reductase (EC 1.1.1.65) (PL reductase) (PL-red)| Length = 333 Score = 34.3 bits (77), Expect = 0.25 Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = -3 Query: 548 PLMNRIKEIGVSYGKNPTQVSLNWLTCQGN--VVPIPGAKNAGQAMEFAGALGWSLTADE 375 P + ++++ +G + SL ++ GN V+PIPG+ + + AL SL+ ++ Sbjct: 246 PFLQAVEQLAKKFGMTMPEFSLLFIMASGNGLVIPIPGSTSVSRTKSNLNALNKSLSPEQ 305 Query: 374 VEELR 360 +E + Sbjct: 306 FKEAK 310
>A115_TOBAC (P40691) Auxin-induced protein PCNT115| Length = 307 Score = 33.9 bits (76), Expect = 0.33 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 4/48 (8%) Frame = -3 Query: 545 LMNRIKEIGVSYGKNPTQVSLNWLTCQGN-VVPIPGA---KNAGQAME 414 L RI E+ V G P+Q++L W+ QGN V PIPG +N Q M+ Sbjct: 255 LYERICEMAVRKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNMK 302
>GS69_BACSU (P80874) General stress protein 69 (EC 1.1.1.-) (GSP69) (AKR11B)| Length = 331 Score = 33.1 bits (74), Expect = 0.56 Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = -3 Query: 512 YGKNPTQVSLNWLTCQ-GNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 YGK+ +++ W+ Q G + + GA+ GQ + GW+L +++ +++ T+ Sbjct: 256 YGKSVIHLAVRWILDQPGADIALWGARKPGQLEALSEITGWTLNSEDQKDINTI 309
>6DCS_SOYBN (P26690) NAD(P)H dependent 6'-deoxychalcone synthase (EC 2.3.1.170)| Length = 315 Score = 32.3 bits (72), Expect = 0.96 Identities = 18/62 (29%), Positives = 34/62 (54%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 +KEI ++GK+ QVSL WL QG V +P + + + + W+LT + ++ + Sbjct: 235 LKEIAEAHGKSIAQVSLRWLYEQG-VTFVPKSYDKERMNQNLHIFDWALTEQDHHKISQI 293 Query: 353 AR 348 ++ Sbjct: 294 SQ 295
>NADO1_ORYSA (Q7G764) Probable NAD(P)H-dependent oxidoreductase 1 (EC 1.1.1.-)| Length = 321 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 ++EI + GK Q+ L WL QG+V+ + N + E W LT +E E + L Sbjct: 234 LQEIAGAKGKTLAQICLRWLYEQGDVLLVK-TYNEKRMKENLDIFNWELTDEERERISQL 292 Query: 353 AREIKGI 333 +++G+ Sbjct: 293 P-QLRGL 298
>YOF5_CAEEL (Q09632) Probable oxidoreductase ZK1290.5 in chromosome II (EC| 1.-.-.-) Length = 321 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/65 (24%), Positives = 33/65 (50%) Frame = -3 Query: 527 EIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTLAR 348 +I Y K+P Q+ L W + Q NV +P + + + E + L+A+++ L + + Sbjct: 207 KIASKYQKSPAQICLRW-SIQQNVPTVPKSTDCRRLKENTNVFDFELSAEDMNTLNSFSS 265 Query: 347 EIKGI 333 + + I Sbjct: 266 QNRKI 270
>XYL1_CANPA (Q6Y0Z3) NADH-dependent D-xylose reductase (EC 1.1.1.175) (XR)| Length = 324 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/60 (26%), Positives = 32/60 (53%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 +K I +GK+P QV L + T +G + IP + + + + + + LT D+++ + L Sbjct: 247 VKSIADKHGKSPAQVLLRYQTQRG-IAVIPRSNSPDRMAQNLSVIDFELTQDDLQAIAEL 305
>COBQ_CLOPE (Q8XLJ6) Cobyric acid synthase| Length = 487 Score = 31.2 bits (69), Expect = 2.1 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -3 Query: 542 MNRIKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKN 432 + RIK++G+ Y +NP + N++ IPG+KN Sbjct: 269 LGRIKDVGIRYAENPKDLE------NANMIIIPGSKN 299
>DKGA_SALTY (Q8ZM06) 2,5-diketo-D-gluconic acid reductase A (EC 1.1.1.274)| (2,5-DKG reductase A) (2,5-DKGR A) (25DKGR-A) (AKR5C) Length = 275 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNW-LTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRT 357 I+E+ YGK P Q+ + W L C +V IP + + E + L DE+ E+ Sbjct: 202 IRELADKYGKTPAQIVIRWHLDC--GLVVIPKSVTPSRIAENFAVWDFRLDKDELGEIAK 259 Query: 356 L 354 L Sbjct: 260 L 260
>DKGA_SALTI (P58744) 2,5-diketo-D-gluconic acid reductase A (EC 1.1.1.274)| (2,5-DKG reductase A) (2,5-DKGR A) (25DKGR-A) (AKR5C) Length = 275 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNW-LTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRT 357 I+E+ YGK P Q+ + W L C +V IP + + E + L DE+ E+ Sbjct: 202 IRELADKYGKTPAQIVIRWHLDC--GLVVIPKSVTPSRIAENFAVWDFRLDKDELGEIAK 259 Query: 356 L 354 L Sbjct: 260 L 260
>SON_MOUSE (Q9QX47) SON protein| Length = 2404 Score = 30.4 bits (67), Expect = 3.6 Identities = 18/52 (34%), Positives = 22/52 (42%) Frame = -1 Query: 472 PARATWCPSRGPRTPGRQWXXXXXXXXXXXPTRSRSCGPSRAKSRESRCPSR 317 P+R + PSR RTP R+ R RS S + R SR P R Sbjct: 1952 PSRRSRTPSRRSRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLR 2003
>P100_LEIMA (P22045) Probable reductase (EC 1.1.-.-)| Length = 284 Score = 30.4 bits (67), Expect = 3.6 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 + IG Y K QV L W Q N++ IP + + + E A + L A++V + L Sbjct: 211 LSAIGAKYNKTAAQVILRW-NIQKNLITIPKSVHRERIEENADIFDFELGAEDVMSIDAL 269
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding| protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) Length = 2426 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/52 (34%), Positives = 22/52 (42%) Frame = -1 Query: 472 PARATWCPSRGPRTPGRQWXXXXXXXXXXXPTRSRSCGPSRAKSRESRCPSR 317 P+R + PSR RTP R+ R RS S + R SR P R Sbjct: 1974 PSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLR 2025
>NADO2_ORYSA (Q7G765) Probable NAD(P)H-dependent oxidoreductase 2 (EC 1.-.-.-)| Length = 322 Score = 30.0 bits (66), Expect = 4.8 Identities = 16/63 (25%), Positives = 31/63 (49%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 + +I + GK Q+ L W+ QG+V+ + N + E W LT +E +++ L Sbjct: 236 LHDIAQTKGKTLAQICLRWMYEQGDVLLVK-TYNENRMKENLDIFDWELTEEERDKISKL 294 Query: 353 ARE 345 ++ Sbjct: 295 PQQ 297
>XYL1_PACTA (P78736) NAD(P)H-dependent D-xylose reductase (EC 1.1.1.-) (XR)| Length = 318 Score = 30.0 bits (66), Expect = 4.8 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Frame = -3 Query: 557 KLQPLMNR--IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLT 384 K QPL I I +GK P QV L W+ +G + IP + + LT Sbjct: 231 KTQPLYENKTITTIAAKHGKTPFQVLLRWVNQRG-IAIIPKSTFPNTLAVNLHVDEFDLT 289 Query: 383 ADEVEELRTLAREIK 339 ++ EE+ L R ++ Sbjct: 290 KEDFEEIAKLDRHLR 304
>DKGA_ECOLI (Q46857) 2,5-diketo-D-gluconic acid reductase A (EC 1.1.1.274)| (2,5-DKG reductase A) (2,5-DKGR A) (25DKGR-A) (AKR5C) Length = 275 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 I+++ YGK P Q+ + W G VV IP + + E + L DE+ E+ L Sbjct: 202 IRDLADKYGKTPAQIVIRWHLDSGLVV-IPKSVTPSRIAENFDVWDFRLDKDELGEIAKL 260
>DKGA_ECO57 (Q8XBT6) 2,5-diketo-D-gluconic acid reductase A (EC 1.1.1.274)| (2,5-DKG reductase A) (2,5-DKGR A) (25DKGR-A) (AKR5C) Length = 275 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 I+++ YGK P Q+ + W G VV IP + + E + L DE+ E+ L Sbjct: 202 IRDLADKYGKTPAQIVIRWHLDSGLVV-IPKSVTPSRIAENFDVWDFRLDKDELGEIAKL 260
>XYL1_PICGU (O94735) NADPH-dependent D-xylose reductase (EC 1.1.1.-) (XR)| Length = 317 Score = 30.0 bits (66), Expect = 4.8 Identities = 18/65 (27%), Positives = 31/65 (47%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 IK + K P QV L W T +G V IP + N + + + L+ ++ +E+ L Sbjct: 240 IKSVAGKVKKTPAQVLLRWATQRGLAV-IPKSNNPDRLLSNLKVNDFDLSQEDFQEISKL 298 Query: 353 AREIK 339 E++ Sbjct: 299 DIELR 303
>Y038_MYCBO (P0A5C2) Hypothetical protein Mb0038c| Length = 441 Score = 29.6 bits (65), Expect = 6.2 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +3 Query: 75 LRPNLLRHAGQKGQTTVLFLIQTDKNISFFWSLHVG---VWPNHMSHAVTSTCSTIYGVA 245 L P L +G +G + ++FL+ +I+ WSL G + P+ A+ S +Y V Sbjct: 182 LLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHG--SAVYAVV 239 Query: 246 MDGSRGRIT 272 G T Sbjct: 240 TGWLHGART 248
>Y037_MYCTU (P0A5C1) Hypothetical protein Rv0037c/MT0042| Length = 441 Score = 29.6 bits (65), Expect = 6.2 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +3 Query: 75 LRPNLLRHAGQKGQTTVLFLIQTDKNISFFWSLHVG---VWPNHMSHAVTSTCSTIYGVA 245 L P L +G +G + ++FL+ +I+ WSL G + P+ A+ S +Y V Sbjct: 182 LLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHG--SAVYAVV 239 Query: 246 MDGSRGRIT 272 G T Sbjct: 240 TGWLHGART 248
>XRN1_SCHPO (P40383) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (Exonuclease 2)| (Exonuclease II) (Exo II) (p140) Length = 1328 Score = 29.6 bits (65), Expect = 6.2 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 152 YKFFLEPARWSLA*PHVPCGYIYLFYYIWGCYGWITWTYN-TYAKSTSDVLQ 304 + ++ E A ++A +V LFYY GC W W YN +A SDVL+ Sbjct: 507 FSYYDEEALKAMAERYVEGLQWVLFYYYRGCQSW-GWYYNYHFAPKISDVLK 557
>SPRL1_HUMAN (Q14515) SPARC-like protein 1 precursor (High endothelial venule| protein) (Hevin) (MAST 9) Length = 664 Score = 29.3 bits (64), Expect = 8.1 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = -2 Query: 543 HEQNQRDWSKLWQEPN--SGVSELADLPGQRGAHPGGQERR 427 H Q RD Q+PN +G E PG+ G H QER+ Sbjct: 181 HSQGLRDQGNQEQDPNISNGEEEEEKEPGEVGTHNDNQERK 221
>XYL1_CANTE (O74237) NAD(P)H-dependent D-xylose reductase (EC 1.1.1.-) (XR)| Length = 322 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = -3 Query: 533 IKEIGVSYGKNPTQVSLNWLTCQGNVVPIPGAKNAGQAMEFAGALGWSLTADEVEELRTL 354 IK I Y K P +V L W Q + IP + + ++ + LT ++ EE+ L Sbjct: 245 IKAIAAKYNKTPAEVLLRW-AAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKL 303 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,013,572 Number of Sequences: 219361 Number of extensions: 1885145 Number of successful extensions: 5909 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 5624 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5899 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
