ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61c19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_186260.2| Oryza sativa (japonica cultivar-group), mRNA 274 3e-70
2dbj|AK064848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 3e-70
3dbj|AK060737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 3e-70
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
5dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
6dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic D... 176 5e-41
7ref|NM_186261.2| Oryza sativa (japonica cultivar-group), mRNA 161 3e-36
8dbj|AK067910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
9gb|AY106674.1| Zea mays PCO110619 mRNA sequence 113 6e-22
10dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 46 0.13
11gb|AC149544.1| Populus trichocarpa clone Pop1-69J1, complete seq... 42 2.0
12ref|XM_850439.1| PREDICTED: Canis familiaris similar to Compleme... 42 2.0
13gb|AC105042.7| Homo sapiens chromosome 18, clone CTD-2544E12, co... 42 2.0
14gb|AC111085.11| Mus musculus chromosome 9, clone RP23-146C24, co... 40 7.7
15dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 7.7
16gb|AY129334.1| Mycobacteriophage Rosebush, complete genome 40 7.7
17gb|AC010096.10| Homo sapiens BAC clone RP11-364A16 from 2, compl... 40 7.7
18dbj|AP000415.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 7.7
19gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 7.7
20emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 7.7

>ref|NM_186260.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1347

 Score =  274 bits (138), Expect = 3e-70
 Identities = 228/258 (88%)
 Strand = Plus / Minus

                                                                        
Query: 311  atgactcctcgatgggcatcttgattcccttgatttcgcgcgcgagggtccgcagctcct 370
            ||||||||||||||||||||||||| |||||||| ||||| || || | ||||| ||| |
Sbjct: 1181 atgactcctcgatgggcatcttgatgcccttgatctcgcgtgccagagaccgcaactctt 1122

                                                                        
Query: 371  cgacctcgtcggcggtgaggctccacccgagggcaccggcgaactccattgcctgcccgg 430
            ||||||||||| ||||||||||||| ||||| || ||||||||||||   ||||| ||||
Sbjct: 1121 cgacctcgtcgccggtgaggctccagccgagcgcgccggcgaactcctgcgcctggccgg 1062

                                                                        
Query: 431  cgttcttggcccccgggatgggcaccacgttgccctggcaggtcagccagttcagagaca 490
            |||||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| || |
Sbjct: 1061 cgttcttggctccggggattggcaccacattgccttggcatgtcagccagttcagtgaaa 1002

                                                                        
Query: 491  cctgagttgggttcttgccatagcttactccaatctctttgattctgttcatgagtggtt 550
            |||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct: 1001 cctgggttgggttcttcccatagctttctccaatctccttgatcctgttcatgagtggtt 942

                              
Query: 551  ggagcttggtgaggaact 568
            | ||||||||||||||||
Sbjct: 941  gaagcttggtgaggaact 924



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>dbj|AK064848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G23, full
            insert sequence
          Length = 1351

 Score =  274 bits (138), Expect = 3e-70
 Identities = 228/258 (88%)
 Strand = Plus / Minus

                                                                        
Query: 311  atgactcctcgatgggcatcttgattcccttgatttcgcgcgcgagggtccgcagctcct 370
            ||||||||||||||||||||||||| |||||||| ||||| || || | ||||| ||| |
Sbjct: 1185 atgactcctcgatgggcatcttgatgcccttgatctcgcgtgccagagaccgcaactctt 1126

                                                                        
Query: 371  cgacctcgtcggcggtgaggctccacccgagggcaccggcgaactccattgcctgcccgg 430
            ||||||||||| ||||||||||||| ||||| || ||||||||||||   ||||| ||||
Sbjct: 1125 cgacctcgtcgccggtgaggctccagccgagcgcgccggcgaactcctgcgcctggccgg 1066

                                                                        
Query: 431  cgttcttggcccccgggatgggcaccacgttgccctggcaggtcagccagttcagagaca 490
            |||||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| || |
Sbjct: 1065 cgttcttggctccggggattggcaccacattgccttggcatgtcagccagttcagtgaaa 1006

                                                                        
Query: 491  cctgagttgggttcttgccatagcttactccaatctctttgattctgttcatgagtggtt 550
            |||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct: 1005 cctgggttgggttcttcccatagctttctccaatctccttgatcctgttcatgagtggtt 946

                              
Query: 551  ggagcttggtgaggaact 568
            | ||||||||||||||||
Sbjct: 945  gaagcttggtgaggaact 928



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>dbj|AK060737.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C07, full
            insert sequence
          Length = 1345

 Score =  274 bits (138), Expect = 3e-70
 Identities = 228/258 (88%)
 Strand = Plus / Minus

                                                                        
Query: 311  atgactcctcgatgggcatcttgattcccttgatttcgcgcgcgagggtccgcagctcct 370
            ||||||||||||||||||||||||| |||||||| ||||| || || | ||||| ||| |
Sbjct: 1178 atgactcctcgatgggcatcttgatgcccttgatctcgcgtgccagagaccgcaactctt 1119

                                                                        
Query: 371  cgacctcgtcggcggtgaggctccacccgagggcaccggcgaactccattgcctgcccgg 430
            ||||||||||| ||||||||||||| ||||| || ||||||||||||   ||||| ||||
Sbjct: 1118 cgacctcgtcgccggtgaggctccagccgagcgcgccggcgaactcctacgcctggccgg 1059

                                                                        
Query: 431  cgttcttggcccccgggatgggcaccacgttgccctggcaggtcagccagttcagagaca 490
            |||||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| || |
Sbjct: 1058 cgttcttggctccggggattggcaccacattgccttggcatgtcagccagttcagtgaaa 999

                                                                        
Query: 491  cctgagttgggttcttgccatagcttactccaatctctttgattctgttcatgagtggtt 550
            |||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct: 998  cctgggttgggttcttcccatagctttctccaatctccttgatcctgttcatgagtggtt 939

                              
Query: 551  ggagcttggtgaggaact 568
            | ||||||||||||||||
Sbjct: 938  gaagcttggtgaggaact 921



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  176 bits (89), Expect = 5e-41
 Identities = 161/185 (87%)
 Strand = Plus / Minus

                                                                           
Query: 311     atgactcctcgatgggcatcttgattcccttgatttcgcgcgcgagggtccgcagctcct 370
               ||||||||||||||||||||||||| |||||||| ||||| || || | ||||| ||| |
Sbjct: 2228915 atgactcctcgatgggcatcttgatgcccttgatctcgcgtgccagagaccgcaactctt 2228856

                                                                           
Query: 371     cgacctcgtcggcggtgaggctccacccgagggcaccggcgaactccattgcctgcccgg 430
               ||||||||||| ||||||||||||| ||||| || ||||||||||||   ||||| ||||
Sbjct: 2228855 cgacctcgtcgccggtgaggctccagccgagcgcgccggcgaactcctgcgcctggccgg 2228796

                                                                           
Query: 431     cgttcttggcccccgggatgggcaccacgttgccctggcaggtcagccagttcagagaca 490
               |||||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| || |
Sbjct: 2228795 cgttcttggctccggggattggcaccacattgccttggcatgtcagccagttcagtgaaa 2228736

                    
Query: 491     cctga 495
               |||||
Sbjct: 2228735 cctga 2228731



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                           
Query: 388     aggctccacccgagggcaccggcgaactccattgcctgcccggcgttcttggcccccggg 447
               |||||||||||||| ||||| ||||||||| | |||||| | |||||||| || || |||
Sbjct: 2233222 aggctccacccgagcgcaccagcgaactccctggcctgctctgcgttcttcgctccgggg 2233163

                                                               
Query: 448     atgggcaccacgttgccctggcaggtcagccagttcagagacacctga 495
               || ||||| |||||||| |||||| ||||||||||||||  |||||||
Sbjct: 2233162 atcggcacaacgttgccttggcagatcagccagttcagaaccacctga 2233115



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                           
Query: 489     cacctgagttgggttcttgccatagcttactccaatctctttgattctgttcatgagtgg 548
               |||||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 2228598 cacctgggttgggttcttcccatagctttctccaatctccttgatcctgttcatgagtgg 2228539

                       
Query: 549     ttggagct 556
               ||| ||||
Sbjct: 2228538 ttgaagct 2228531



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                           
Query: 488     acacctgagttgggttcttgccatagcttactccaatctctttgattctgttcatgagtg 547
               |||||||||||||| ||||  |||| ||| ||||||||||||| || ||||| || ||||
Sbjct: 2232841 acacctgagttggggtcttctcataacttcctccaatctctttaatcctgttaataagtg 2232782

                        
Query: 548     gttggagct 556
               |||||||||
Sbjct: 2232781 gttggagct 2232773



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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score =  176 bits (89), Expect = 5e-41
 Identities = 161/185 (87%)
 Strand = Plus / Minus

                                                                         
Query: 311   atgactcctcgatgggcatcttgattcccttgatttcgcgcgcgagggtccgcagctcct 370
             ||||||||||||||||||||||||| |||||||| ||||| || || | ||||| ||| |
Sbjct: 96817 atgactcctcgatgggcatcttgatgcccttgatctcgcgtgccagagaccgcaactctt 96758

                                                                         
Query: 371   cgacctcgtcggcggtgaggctccacccgagggcaccggcgaactccattgcctgcccgg 430
             ||||||||||| ||||||||||||| ||||| || ||||||||||||   ||||| ||||
Sbjct: 96757 cgacctcgtcgccggtgaggctccagccgagcgcgccggcgaactcctgcgcctggccgg 96698

                                                                         
Query: 431   cgttcttggcccccgggatgggcaccacgttgccctggcaggtcagccagttcagagaca 490
             |||||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| || |
Sbjct: 96697 cgttcttggctccggggattggcaccacattgccttggcatgtcagccagttcagtgaaa 96638

                  
Query: 491   cctga 495
             |||||
Sbjct: 96637 cctga 96633



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                          
Query: 388    aggctccacccgagggcaccggcgaactccattgcctgcccggcgttcttggcccccggg 447
              |||||||||||||| ||||| ||||||||| | |||||| | |||||||| || || |||
Sbjct: 101124 aggctccacccgagcgcaccagcgaactccctggcctgctctgcgttcttcgctccgggg 101065

                                                              
Query: 448    atgggcaccacgttgccctggcaggtcagccagttcagagacacctga 495
              || ||||| |||||||| |||||| ||||||||||||||  |||||||
Sbjct: 101064 atcggcacaacgttgccttggcagatcagccagttcagaaccacctga 101017



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 489   cacctgagttgggttcttgccatagcttactccaatctctttgattctgttcatgagtgg 548
             |||||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 96500 cacctgggttgggttcttcccatagctttctccaatctccttgatcctgttcatgagtgg 96441

                     
Query: 549   ttggagct 556
             ||| ||||
Sbjct: 96440 ttgaagct 96433



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                          
Query: 488    acacctgagttgggttcttgccatagcttactccaatctctttgattctgttcatgagtg 547
              |||||||||||||| ||||  |||| ||| ||||||||||||| || ||||| || ||||
Sbjct: 100743 acacctgagttggggtcttctcataacttcctccaatctctttaatcctgttaataagtg 100684

                       
Query: 548    gttggagct 556
              |||||||||
Sbjct: 100683 gttggagct 100675



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>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1343_B12
          Length = 121362

 Score =  176 bits (89), Expect = 5e-41
 Identities = 161/185 (87%)
 Strand = Plus / Minus

                                                                        
Query: 311  atgactcctcgatgggcatcttgattcccttgatttcgcgcgcgagggtccgcagctcct 370
            ||||||||||||||||||||||||| |||||||| ||||| || || | ||||| ||| |
Sbjct: 2614 atgactcctcgatgggcatcttgatgcccttgatctcgcgtgccagagaccgcaactctt 2555

                                                                        
Query: 371  cgacctcgtcggcggtgaggctccacccgagggcaccggcgaactccattgcctgcccgg 430
            ||||||||||| ||||||||||||| ||||| || ||||||||||||   ||||| ||||
Sbjct: 2554 cgacctcgtcgccggtgaggctccagccgagcgcgccggcgaactcctgcgcctggccgg 2495

                                                                        
Query: 431  cgttcttggcccccgggatgggcaccacgttgccctggcaggtcagccagttcagagaca 490
            |||||||||| || ||||| |||||||| ||||| ||||| |||||||||||||| || |
Sbjct: 2494 cgttcttggctccggggattggcaccacattgccttggcatgtcagccagttcagtgaaa 2435

                 
Query: 491  cctga 495
            |||||
Sbjct: 2434 cctga 2430



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                        
Query: 388  aggctccacccgagggcaccggcgaactccattgcctgcccggcgttcttggcccccggg 447
            |||||||||||||| ||||| ||||||||| | |||||| | |||||||| || || |||
Sbjct: 6921 aggctccacccgagcgcaccagcgaactccctggcctgctctgcgttcttcgctccgggg 6862

                                                            
Query: 448  atgggcaccacgttgccctggcaggtcagccagttcagagacacctga 495
            || ||||| |||||||| |||||| ||||||||||||||  |||||||
Sbjct: 6861 atcggcacaacgttgccttggcagatcagccagttcagaaccacctga 6814



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                        
Query: 489  cacctgagttgggttcttgccatagcttactccaatctctttgattctgttcatgagtgg 548
            |||||| ||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 2297 cacctgggttgggttcttcccatagctttctccaatctccttgatcctgttcatgagtgg 2238

                    
Query: 549  ttggagct 556
            ||| ||||
Sbjct: 2237 ttgaagct 2230



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 488  acacctgagttgggttcttgccatagcttactccaatctctttgattctgttcatgagtg 547
            |||||||||||||| ||||  |||| ||| ||||||||||||| || ||||| || ||||
Sbjct: 6540 acacctgagttggggtcttctcataacttcctccaatctctttaatcctgttaataagtg 6481

                     
Query: 548  gttggagct 556
            |||||||||
Sbjct: 6480 gttggagct 6472



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>ref|NM_186261.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1543

 Score =  161 bits (81), Expect = 3e-36
 Identities = 156/181 (86%)
 Strand = Plus / Minus

                                                                        
Query: 388  aggctccacccgagggcaccggcgaactccattgcctgcccggcgttcttggcccccggg 447
            |||||||||||||| ||||| ||||||||| | |||||| | |||||||| || || |||
Sbjct: 1219 aggctccacccgagcgcaccagcgaactccctggcctgctctgcgttcttcgctccgggg 1160

                                                                        
Query: 448  atgggcaccacgttgccctggcaggtcagccagttcagagacacctgagttgggttcttg 507
            || ||||| |||||||| |||||| ||||||||||||||  ||||||||||||| |||| 
Sbjct: 1159 atcggcacaacgttgccttggcagatcagccagttcagaaccacctgagttggggtcttc 1100

                                                                        
Query: 508  ccatagcttactccaatctctttgattctgttcatgagtggttggagcttggtgaggaac 567
             |||| ||| ||||||||||||| || ||||| || ||||||||||||||||| ||||||
Sbjct: 1099 tcataacttcctccaatctctttaatcctgttaataagtggttggagcttggtcaggaac 1040

             
Query: 568  t 568
            |
Sbjct: 1039 t 1039



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>dbj|AK067910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124N22, full
            insert sequence
          Length = 1543

 Score =  161 bits (81), Expect = 3e-36
 Identities = 156/181 (86%)
 Strand = Plus / Minus

                                                                        
Query: 388  aggctccacccgagggcaccggcgaactccattgcctgcccggcgttcttggcccccggg 447
            |||||||||||||| ||||| ||||||||| | |||||| | |||||||| || || |||
Sbjct: 1219 aggctccacccgagcgcaccagcgaactccctggcctgctctgcgttcttcgctccgggg 1160

                                                                        
Query: 448  atgggcaccacgttgccctggcaggtcagccagttcagagacacctgagttgggttcttg 507
            || ||||| |||||||| |||||| ||||||||||||||  ||||||||||||| |||| 
Sbjct: 1159 atcggcacaacgttgccttggcagatcagccagttcagaaccacctgagttggggtcttc 1100

                                                                        
Query: 508  ccatagcttactccaatctctttgattctgttcatgagtggttggagcttggtgaggaac 567
             |||| ||| ||||||||||||| || ||||| || ||||||||||||||||| ||||||
Sbjct: 1099 tcataacttcctccaatctctttaatcctgttaataagtggttggagcttggtcaggaac 1040

             
Query: 568  t 568
            |
Sbjct: 1039 t 1039



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>gb|AY106674.1| Zea mays PCO110619 mRNA sequence
          Length = 1509

 Score =  113 bits (57), Expect = 6e-22
 Identities = 168/205 (81%)
 Strand = Plus / Minus

                                                                        
Query: 364  agctcctcgacctcgtcggcggtgaggctccacccgagggcaccggcgaactccattgcc 423
            |||||||| ||||||||||  |  |||||||||||||| || || |||||||||   |||
Sbjct: 1162 agctcctccacctcgtcgggcgccaggctccacccgagagcgccagcgaactcccgcgcc 1103

                                                                        
Query: 424  tgcccggcgttcttggcccccgggatgggcaccacgttgccctggcaggtcagccagttc 483
            ||| ||||||||||||| |||||||| ||||||||||||||||||||   ||||||||||
Sbjct: 1102 tgctcggcgttcttggcgcccgggatcggcaccacgttgccctggcacaccagccagttc 1043

                                                                        
Query: 484  agagacacctgagttgggttcttgccatagcttactccaatctctttgattctgttcatg 543
            ||   |||||| ||||   || | || |||||| |||| ||||| ||||| | ||| || 
Sbjct: 1042 agcaccacctgggttgaagtcctcccgtagcttcctccgatctccttgatccggttgata 983

                                     
Query: 544  agtggttggagcttggtgaggaact 568
            ||||| |||||||| || |||||||
Sbjct: 982  agtggctggagcttcgtcaggaact 958



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 363     cagctcctcgacctcgtcggcggtgag 389
               ||||||||||||||||||| |||||||
Sbjct: 3180310 cagctcctcgacctcgtcgtcggtgag 3180284



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>gb|AC149544.1| Populus trichocarpa clone Pop1-69J1, complete sequence
          Length = 94430

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 131   tctgatccaaacggataaaaa 151
             |||||||||||||||||||||
Sbjct: 15317 tctgatccaaacggataaaaa 15297



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>ref|XM_850439.1| PREDICTED: Canis familiaris similar to Complement C5 precursor
            (LOC612714), mRNA
          Length = 1840

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 421  gcctgcccggcgttcttggcc 441
            |||||||||||||||||||||
Sbjct: 1348 gcctgcccggcgttcttggcc 1368



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>gb|AC105042.7| Homo sapiens chromosome 18, clone CTD-2544E12, complete sequence
          Length = 159505

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    gtttatctttttcttacaaaa 44
             |||||||||||||||||||||
Sbjct: 37942 gtttatctttttcttacaaaa 37962



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>gb|AC111085.11| Mus musculus chromosome 9, clone RP23-146C24, complete sequence
          Length = 220622

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     tttatctttttcttacaaaa 44
              ||||||||||||||||||||
Sbjct: 112215 tttatctttttcttacaaaa 112234



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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 407     cggcgaactccattgcctgc 426
               ||||||||||||||||||||
Sbjct: 4106340 cggcgaactccattgcctgc 4106359



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>gb|AY129334.1| Mycobacteriophage Rosebush, complete genome
          Length = 67480

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 361   cgcagctcctcgacctcgtcggcg 384
             ||||||||||||| ||||||||||
Sbjct: 13567 cgcagctcctcgaactcgtcggcg 13544



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>gb|AC010096.10| Homo sapiens BAC clone RP11-364A16 from 2, complete sequence
          Length = 163198

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    agtacaagtgatgtcctcca 303
              ||||||||||||||||||||
Sbjct: 114747 agtacaagtgatgtcctcca 114728



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>dbj|AP000415.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIG10
          Length = 31712

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   tttatctttttcttacaaaa 44
            ||||||||||||||||||||
Sbjct: 1324 tttatctttttcttacaaaa 1305



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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 407     cggcgaactccattgcctgc 426
               ||||||||||||||||||||
Sbjct: 4110938 cggcgaactccattgcctgc 4110957



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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    gcagctcctcgacctcgtcg 381
              ||||||||||||||||||||
Sbjct: 392313 gcagctcctcgacctcgtcg 392294


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,141,305
Number of Sequences: 3902068
Number of extensions: 4141305
Number of successful extensions: 78990
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78717
Number of HSP's gapped (non-prelim): 273
length of query: 568
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 545
effective length of database: 17,143,297,704
effective search space: 9343097248680
effective search space used: 9343097248680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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