ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61c18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF543426.1| Leymus cinereus putative serine/threonine phosphatase (PRC140) gene, partial cds Length = 1146 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Minus Query: 384 aagccttgtcattgccgatgcaaagaggcctggctatgtctatggcttcctggttatcca 443 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 1139 aagccttgtcattgccgatgcagagaggcctggcgatgtctatggcttcctggttatcca 1080 Query: 444 ccttatcccacaagccatcagaggcaagtac 474 ||||||||||||||||||||||||||||||| Sbjct: 1079 ccttatcccacaagccatcagaggcaagtac 1049
>gb|AF543425.1| Leymus triticoides putative serine/threonine phosphatase (PRC140) gene, partial cds Length = 1104 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Minus Query: 384 aagccttgtcattgccgatgcaaagaggcctggctatgtctatggcttcctggttatcca 443 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 1097 aagccttgtcattgccgatgcagagaggcctggcgatgtctatggcttcctggttatcca 1038 Query: 444 ccttatcccacaagccatcagaggcaagtac 474 ||||||||||||||||||||||||||||||| Sbjct: 1037 ccttatcccacaagccatcagaggcaagtac 1007
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 103 bits (52), Expect = 5e-19 Identities = 140/170 (82%) Strand = Plus / Minus Query: 302 tgtatgatcaaaacgctgatgtcatcggtagaccccctggaacccgcggtttcgacaagc 361 |||||||||| || |||||| || || || || ||||| | | |||| |||||||| ||| Sbjct: 10136988 tgtatgatcacaatgctgatatcgtcagtcgagcccctagtaaccgcagtttcgacgagc 10136929 Query: 362 cttntgcaagcagccatgctanaagccttgtcattgccgatgcaaagaggcctggctatg 421 || ||||||||| ||||| | |||| ||||| |||| |||| |||| |||||||| ||| Sbjct: 10136928 ctcctgcaagcagtcatgcgagaagctttgtcgttgctgatgtaaagcggcctggcaatg 10136869 Query: 422 tctatggcttcctggttatccaccttatcccacaagccatcagaggcaag 471 || | || |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 10136868 tcaactgcctcctggttctccaccttgtcccacaaaccatcagaggcaag 10136819 Score = 65.9 bits (33), Expect = 1e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 25 agtatgaggtgagcactaaccctgccttattacattagaatcaaagaatgaat 77 ||||||||||||| | |||| | |||||||||||||||||||||||||||||| Sbjct: 10137361 agtatgaggtgagtagtaactc-gccttattacattagaatcaaagaatgaat 10137310
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 103 bits (52), Expect = 5e-19 Identities = 140/170 (82%) Strand = Plus / Minus Query: 302 tgtatgatcaaaacgctgatgtcatcggtagaccccctggaacccgcggtttcgacaagc 361 |||||||||| || |||||| || || || || ||||| | | |||| |||||||| ||| Sbjct: 82609 tgtatgatcacaatgctgatatcgtcagtcgagcccctagtaaccgcagtttcgacgagc 82550 Query: 362 cttntgcaagcagccatgctanaagccttgtcattgccgatgcaaagaggcctggctatg 421 || ||||||||| ||||| | |||| ||||| |||| |||| |||| |||||||| ||| Sbjct: 82549 ctcctgcaagcagtcatgcgagaagctttgtcgttgctgatgtaaagcggcctggcaatg 82490 Query: 422 tctatggcttcctggttatccaccttatcccacaagccatcagaggcaag 471 || | || |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 82489 tcaactgcctcctggttctccaccttgtcccacaaaccatcagaggcaag 82440 Score = 65.9 bits (33), Expect = 1e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 25 agtatgaggtgagcactaaccctgccttattacattagaatcaaagaatgaat 77 ||||||||||||| | |||| | |||||||||||||||||||||||||||||| Sbjct: 82982 agtatgaggtgagtagtaactc-gccttattacattagaatcaaagaatgaat 82931
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 103 bits (52), Expect = 5e-19 Identities = 140/170 (82%) Strand = Plus / Minus Query: 302 tgtatgatcaaaacgctgatgtcatcggtagaccccctggaacccgcggtttcgacaagc 361 |||||||||| || |||||| || || || || ||||| | | |||| |||||||| ||| Sbjct: 10135109 tgtatgatcacaatgctgatatcgtcagtcgagcccctagtaaccgcagtttcgacgagc 10135050 Query: 362 cttntgcaagcagccatgctanaagccttgtcattgccgatgcaaagaggcctggctatg 421 || ||||||||| ||||| | |||| ||||| |||| |||| |||| |||||||| ||| Sbjct: 10135049 ctcctgcaagcagtcatgcgagaagctttgtcgttgctgatgtaaagcggcctggcaatg 10134990 Query: 422 tctatggcttcctggttatccaccttatcccacaagccatcagaggcaag 471 || | || |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 10134989 tcaactgcctcctggttctccaccttgtcccacaaaccatcagaggcaag 10134940 Score = 65.9 bits (33), Expect = 1e-07 Identities = 49/53 (92%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 25 agtatgaggtgagcactaaccctgccttattacattagaatcaaagaatgaat 77 ||||||||||||| | |||| | |||||||||||||||||||||||||||||| Sbjct: 10135482 agtatgaggtgagtagtaactc-gccttattacattagaatcaaagaatgaat 10135431
>emb|AJ242803.1|SST242803 Sporobolus stapfianus partial mRNA for putative serine/threonine phosphatase type 2c Length = 1075 Score = 50.1 bits (25), Expect = 0.007 Identities = 42/48 (87%) Strand = Plus / Minus Query: 366 tgcaagcagccatgctanaagccttgtcattgccgatgcaaagaggcc 413 |||| |||||||||| | ||||||||||||||| | |||| ||||||| Sbjct: 727 tgcaggcagccatgcgagaagccttgtcattgctggtgcagagaggcc 680
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 58 attagaatcaaagaatgaatgaatgga 84 |||| |||||||||||||||||||||| Sbjct: 3713421 attaaaatcaaagaatgaatgaatgga 3713447
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 58 attagaatcaaagaatgaatgaatgga 84 |||| |||||||||||||||||||||| Sbjct: 3713395 attaaaatcaaagaatgaatgaatgga 3713421
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 58 attagaatcaaagaatgaatgaatgga 84 |||| |||||||||||||||||||||| Sbjct: 36252 attaaaatcaaagaatgaatgaatgga 36226
>emb|AL513523.33| Human DNA sequence from clone RP11-216N14 on chromosome 1 Contains a survival of motor neuron protein interacting protein 1 pseudogene (SIP1), a novel gene (FLJ21919), two novel genes, a novel gene, the SLC27A3 gene for solute carrier family 27 (fatty acid transporter), member 3, a pseudogene similar to part of putative neuronal cell adhesion molecule (PUNC), the 3' end of the gene for transcription repressor p66 beta component of the MeCP1 complex (P66beta), a adipose differentiation-related protein (ADFP) pseudogene and a CpG island, complete sequence Length = 150166 Score = 44.1 bits (22), Expect = 0.41 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 61 agaatcaaagaatgaatgaatggaattaaattaa 94 |||||||| |||||||||||| |||||||||||| Sbjct: 114166 agaatcaacgaatgaatgaat-gaattaaattaa 114198
>emb|CR391999.9| Zebrafish DNA sequence from clone CH211-261L7 in linkage group 5, complete sequence Length = 176753 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 aaagaatgaatgaatggaatta 88 |||||||||||||||||||||| Sbjct: 90735 aaagaatgaatgaatggaatta 90714
>emb|AL929549.16| Zebrafish DNA sequence from clone CH211-149L22 in linkage group 5, complete sequence Length = 146059 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 aaagaatgaatgaatggaatta 88 |||||||||||||||||||||| Sbjct: 36936 aaagaatgaatgaatggaatta 36915
>gb|AC153497.8| Mus musculus 10 BAC RP23-226H21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179741 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 25 agtatgaggtgagcactaaccctgcc 50 ||||||||||||||||||||| |||| Sbjct: 50200 agtatgaggtgagcactaaccatgcc 50225
>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 279677 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 25 agtatgaggtgagcactaaccctgcc 50 ||||||||||||||||||||| |||| Sbjct: 228129 agtatgaggtgagcactaaccatgcc 228154
>emb|CR381573.14| Zebrafish DNA sequence from clone DKEY-23M15 in linkage group 24, complete sequence Length = 120376 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 aatgaatgaatggaattaaat 91 ||||||||||||||||||||| Sbjct: 39021 aatgaatgaatggaattaaat 39041
>gb|AC107638.17| Mus musculus, clone RP23-44D14, complete sequence Length = 231286 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tagaatcaaagaatgaatgaa 80 ||||||||||||||||||||| Sbjct: 199795 tagaatcaaagaatgaatgaa 199815
>emb|AL355603.17| Human DNA sequence from clone RP11-394M3 on chromosome 13 Contains the 5' end of a novel gene (KIAA1165) (likely ortholog of mouse Nedd4 WW domain-binding protein 5A), a novel gene and a CpG island, complete sequence Length = 101771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 agaatgaatgaatggaattaa 89 ||||||||||||||||||||| Sbjct: 19279 agaatgaatgaatggaattaa 19299
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 gaatgaatgaatggaattaaattaa 94 ||||||||||||| ||||||||||| Sbjct: 100350 gaatgaatgaatgaaattaaattaa 100374
>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence Length = 209118 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 aatgaatgaatggaattaaat 91 ||||||||||||||||||||| Sbjct: 3849 aatgaatgaatggaattaaat 3829
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 tagaatcaaagaatgaatgaatgga 84 ||||||||| ||||||||||||||| Sbjct: 47601 tagaatcaaggaatgaatgaatgga 47625
>gb|AC150313.7| Mus musculus BAC clone RP23-436A18 from chromosome 7, complete sequence Length = 204095 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 tagaatcaaagaatgaatgaa 80 ||||||||||||||||||||| Sbjct: 51293 tagaatcaaagaatgaatgaa 51313
>gb|AC026888.6|AC026888 Homo sapiens chromosome 14 clone CTD-2243E23 and CTD-2009K21 map 14q24.3-31, complete sequence Length = 208894 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 63 aatcaaagaatgaatgaatggaattaaat 91 |||||| ||||||||||||| |||||||| Sbjct: 123131 aatcaatgaatgaatgaatgtaattaaat 123103
>emb|BX005057.8| Zebrafish DNA sequence from clone DKEY-12L12 in linkage group 24, complete sequence Length = 238625 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 aatgaatgaatggaattaaat 91 ||||||||||||||||||||| Sbjct: 77824 aatgaatgaatggaattaaat 77804
>emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chromosome X, complete sequence Length = 207922 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 gaatcaaagaatgaatgaatg 82 ||||||||||||||||||||| Sbjct: 159811 gaatcaaagaatgaatgaatg 159791
>gb|AC116409.9| Mus musculus chromosome 3, clone RP24-337P23, complete sequence Length = 162232 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 atgtctatggcttcctggtt 438 |||||||||||||||||||| Sbjct: 115344 atgtctatggcttcctggtt 115363
>emb|CT025590.5| Mouse DNA sequence from clone RP24-132A1 on chromosome 14, complete sequence Length = 193572 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 aatgaatgaatggaattaaattaa 94 ||||||||||||||| |||||||| Sbjct: 145549 aatgaatgaatggaaataaattaa 145526
>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11, complete sequence Length = 198600 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 tacattagaatcaaagaatgaatgaatg 82 ||||| ||||| |||||||||||||||| Sbjct: 107166 tacatgagaatgaaagaatgaatgaatg 107193
>gb|AC154580.2| Mus musculus BAC clone RP23-380H1 from chromosome 14, complete sequence Length = 187377 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aatgaatgaatggaattaaattaa 94 ||||||||||||||| |||||||| Sbjct: 4560 aatgaatgaatggaaataaattaa 4583
>emb|AL450363.12| Human DNA sequence from clone RP11-469M2 on chromosome 10, complete sequence Length = 114333 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aattaaattaagtacataaa 103 |||||||||||||||||||| Sbjct: 9665 aattaaattaagtacataaa 9684
>emb|AL357376.16| Human DNA sequence from clone RP11-43G16 on chromosome 6, complete sequence Length = 45386 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aatcaaagaatgaatgaatg 82 |||||||||||||||||||| Sbjct: 7573 aatcaaagaatgaatgaatg 7554
>emb|AL354951.7| Human DNA sequence from clone RP11-451M19 on chromosome 10 Contains a ribosomal protein L21 (RPL21) pseudogene, the XPNPEP1 gene for X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (SAMP, XPNPEP, XPNPEPL), a novel gene and one CpG island, complete sequence Length = 205329 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aatcaaagaatgaatgaatg 82 |||||||||||||||||||| Sbjct: 1928 aatcaaagaatgaatgaatg 1947
>emb|AL137019.6| Human DNA sequence from clone RP11-143P10 on chromosome 9q31.3-33.1, complete sequence Length = 181542 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ttgcaaaatggtgcaaccac 151 |||||||||||||||||||| Sbjct: 44155 ttgcaaaatggtgcaaccac 44174
>emb|AL133416.8| Human DNA sequence from clone RP11-271I13 on chromosome 10, complete sequence Length = 41435 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aatcaaagaatgaatgaatg 82 |||||||||||||||||||| Sbjct: 41363 aatcaaagaatgaatgaatg 41382
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 acatacaacaacagcctctt 22 |||||||||||||||||||| Sbjct: 1051774 acatacaacaacagcctctt 1051755
>emb|BX005005.19| Zebrafish DNA sequence from clone DKEY-70O15 in linkage group 13, complete sequence Length = 153184 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 gaatcaaagaatgaatgaatggaa 85 |||| ||||||||||||||||||| Sbjct: 91485 gaatgaaagaatgaatgaatggaa 91508
>emb|BX088648.9| Mouse DNA sequence from clone RP23-156M16 on chromosome 11, complete sequence Length = 199838 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 tcaaagaatgaatgaatggaattaaatt 92 ||||||||||| |||| ||||||||||| Sbjct: 160509 tcaaagaatgagtgaaaggaattaaatt 160536
>emb|AL603917.5| Mouse DNA sequence from clone RP23-107J13 on chromosome 11 Contains a novel gene, a glyoxalase 1 (Glo1) pseudogene and a pseudogene similar to part of nuclear pore membrane protein 121 Pom121, complete sequence Length = 212255 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aatcaaagaatgaatgaatg 82 |||||||||||||||||||| Sbjct: 201770 aatcaaagaatgaatgaatg 201751
>emb|BX571700.8| Zebrafish DNA sequence from clone CH211-168K14 in linkage group 9, complete sequence Length = 137898 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aatcaaagaatgaatgaatg 82 |||||||||||||||||||| Sbjct: 116461 aatcaaagaatgaatgaatg 116480
>emb|BX248332.14| Zebrafish DNA sequence from clone CH211-212O2 in linkage group 9, complete sequence Length = 237498 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aatgaatgaatggaattaaattaa 94 |||||||||||| ||||||||||| Sbjct: 40421 aatgaatgaatgaaattaaattaa 40444
>gb|AC069023.5| Homo sapiens chromosome 10 clone RP11-457D2, complete sequence Length = 131345 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 atcaaagaatgaatgaatggaatt 87 ||||| |||||||||||||||||| Sbjct: 23294 atcaatgaatgaatgaatggaatt 23317
>emb|BX546473.10| Zebrafish DNA sequence from clone DKEYP-51F2 in linkage group 3, complete sequence Length = 211253 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gaatgaatgaatggaattaa 89 |||||||||||||||||||| Sbjct: 29853 gaatgaatgaatggaattaa 29834
>gb|AC118584.18| Papio anubis clone rp41-78d16, complete sequence Length = 189610 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atcaaagaatgaatgaatgg 83 |||||||||||||||||||| Sbjct: 36222 atcaaagaatgaatgaatgg 36241
>gb|AC117273.41| Papio anubis clone rp41-167h10, complete sequence Length = 184931 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atcaaagaatgaatgaatgg 83 |||||||||||||||||||| Sbjct: 114077 atcaaagaatgaatgaatgg 114058
>gb|AC025428.10| Homo sapiens chromosome 10 clone RP11-475D12, complete sequence Length = 174906 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 agaatcaaagaatgaatgaatgga 84 |||||||| ||||||||||||||| Sbjct: 139046 agaatcaatgaatgaatgaatgga 139023
>gb|AC079319.19| Homo sapiens 12q BAC RP11-118A3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152449 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 gaatcaaagaatgaatgaatggaa 85 |||||||||||||||| ||||||| Sbjct: 38710 gaatcaaagaatgaataaatggaa 38687
>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence Length = 173840 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ttaaattaagtacataaaga 105 |||||||||||||||||||| Sbjct: 15250 ttaaattaagtacataaaga 15231
>emb|CR388226.3| Mouse DNA sequence from clone RP24-131D9 on chromosome 2, complete sequence Length = 15347 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 aattaaattaagtacataaa 103 |||||||||||||||||||| Sbjct: 3048 aattaaattaagtacataaa 3067
>gb|AC009014.5| Homo sapiens chromosome 5 clone P1_748D6, complete sequence Length = 88365 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 atgaatgaatggaattaaat 91 |||||||||||||||||||| Sbjct: 60251 atgaatgaatggaattaaat 60270
>emb|BX827002.1|CNS0A4AI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1702 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 atcaaaacgctgatgtcatc 327 |||||||||||||||||||| Sbjct: 1379 atcaaaacgctgatgtcatc 1398
>gb|AC171128.2| Helobdella robusta clone CH306-1A10, complete sequence Length = 76716 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aaagaatgaatgaatggaat 86 |||||||||||||||||||| Sbjct: 9959 aaagaatgaatgaatggaat 9940
>gb|AC099518.3| Homo sapiens chromosome 16 clone RP11-626G11, complete sequence Length = 216264 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atcaaagaatgaatgaatgg 83 |||||||||||||||||||| Sbjct: 36914 atcaaagaatgaatgaatgg 36895
>emb|AL391731.1|ATT6L19 Arabidopsis thaliana DNA chromosome 3, BAC clone T6L19 Length = 47069 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cttattacattagaatcaaa 69 |||||||||||||||||||| Sbjct: 14068 cttattacattagaatcaaa 14087
>emb|AL928997.8| Zebrafish DNA sequence from clone CH211-125O15 in linkage group 18, complete sequence Length = 169038 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aaagaatgaatgaatggaattaaa 90 |||||||||||||||| ||||||| Sbjct: 90883 aaagaatgaatgaatgaaattaaa 90906
>emb|CR955007.2| Medicago truncatula chromosome 5 clone mte1-58b20, COMPLETE SEQUENCE Length = 108616 Score = 40.1 bits (20), Expect = 6.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 67 aaagaatgaatgaatggaattaaattaa 94 ||||||||||||||| |||||||||||| Sbjct: 9575 aaagaatgaatgaat-gaattaaattaa 9549 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,882,653 Number of Sequences: 3902068 Number of extensions: 3882653 Number of successful extensions: 85861 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 85655 Number of HSP's gapped (non-prelim): 208 length of query: 477 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 455 effective length of database: 17,147,199,772 effective search space: 7801975896260 effective search space used: 7801975896260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
