ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93f18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059548:Os03g0794700 | 265 | 3e-71 | 2 | AK058881:Os03g0794700 | 265 | 3e-71 | 3 | Os07g0173700:Os07g0173700 | 256 | 9e-69 | 4 | Os07g0173500:Os07g0173500 | 254 | 4e-68 | 5 | Os03g0704000:Os03g0704000 | 41 | 0.001 | 6 | U25969:Os11g0582400 | 28 | 5.5 | 7 | AK108352:Os11g0582400 | 28 | 5.5 | 8 | AK073083:Os11g0582400 | 28 | 5.5 | 9 | AF516927:Os11g0582400 | 28 | 5.5 | 10 | AF049348:Os11g0582400 | 28 | 5.5 |
|---|
>AK059548:Os03g0794700 | Length = 152 Score = 265 bits (677), Expect = 3e-71 Identities = 130/152 (85%), Positives = 138/152 (90%) Frame = +3 Query: 96 MSLIAGEEFQHILRVLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELS 275 MSLIAGE+FQHILR+LNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGEL+ Sbjct: 1 MSLIAGEDFQHILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELT 60 Query: 276 SEEMDRLMTVVANPRQFKVPDWFLNRKKDYKDGRFTQVVSNAVDMKLRDDLERLKKIRNH 455 EE++RLMTVVANPRQFKVPDWFLNRKKDYKDGRF+QVVSNA+DMKLRDDLERLKKIRNH Sbjct: 61 PEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNH 120 Query: 456 RGLRHYWGVRVRGQHXXXXXXXXXXXXXSKKR 551 RGLRHYWG+RVRGQH SKKR Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152
>AK058881:Os03g0794700 | Length = 152 Score = 265 bits (677), Expect = 3e-71 Identities = 130/152 (85%), Positives = 138/152 (90%) Frame = +3 Query: 96 MSLIAGEEFQHILRVLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELS 275 MSLIAGE+FQHILR+LNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGEL+ Sbjct: 1 MSLIAGEDFQHILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELT 60 Query: 276 SEEMDRLMTVVANPRQFKVPDWFLNRKKDYKDGRFTQVVSNAVDMKLRDDLERLKKIRNH 455 EE++RLMTVVANPRQFKVPDWFLNRKKDYKDGRF+QVVSNA+DMKLRDDLERLKKIRNH Sbjct: 61 PEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNH 120 Query: 456 RGLRHYWGVRVRGQHXXXXXXXXXXXXXSKKR 551 RGLRHYWG+RVRGQH SKKR Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152
>Os07g0173700:Os07g0173700 | Length = 148 Score = 256 bits (655), Expect = 9e-69 Identities = 124/147 (84%), Positives = 133/147 (90%) Frame = +3 Query: 111 GEEFQHILRVLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELSSEEMD 290 GE+FQHILR+LNTNVDGKQKIMFALTSIKG+GRRFSNIACKKADIDMNKRAGEL+ EE++ Sbjct: 2 GEDFQHILRLLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELE 61 Query: 291 RLMTVVANPRQFKVPDWFLNRKKDYKDGRFTQVVSNAVDMKLRDDLERLKKIRNHRGLRH 470 RLMTVVANPRQFKVPDWFLNRKKDYKDGRF+QVVSNA+DMKLRDDLERLKKIRNHRGLRH Sbjct: 62 RLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRH 121 Query: 471 YWGVRVRGQHXXXXXXXXXXXXXSKKR 551 YWG+RVRGQH SKKR Sbjct: 122 YWGLRVRGQHTKTTGRRGKTVGVSKKR 148
>Os07g0173500:Os07g0173500 | Length = 168 Score = 254 bits (650), Expect = 4e-68 Identities = 130/168 (77%), Positives = 138/168 (82%), Gaps = 16/168 (9%) Frame = +3 Query: 96 MSLIAGEEFQHILRVLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKR----- 260 MSLIAGE+FQHILR+LNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKR Sbjct: 1 MSLIAGEDFQHILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRSGVVC 60 Query: 261 -----------AGELSSEEMDRLMTVVANPRQFKVPDWFLNRKKDYKDGRFTQVVSNAVD 407 AGEL+ EE++RLMTVVANPRQFKVPDWFLNRKKDYKDGRF+QVVSNA+D Sbjct: 61 YYLAVHNYVEWAGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALD 120 Query: 408 MKLRDDLERLKKIRNHRGLRHYWGVRVRGQHXXXXXXXXXXXXXSKKR 551 MKLRDDLERLKKIRNHRGLRHYWG+RVRGQH SKKR Sbjct: 121 MKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 168
>Os03g0704000:Os03g0704000 | Length = 161 Score = 40.8 bits (94), Expect = 0.001 Identities = 34/122 (27%), Positives = 53/122 (43%) Frame = +3 Query: 132 LRVLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELSSEEMDRLMTVVA 311 +R+ + +++ ++L I G+GR S + D NK +LS EE+ L Sbjct: 47 IRIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVITLR---- 101 Query: 312 NPRQFKVPDWFLNRKKDYKDGRFTQVVSNAVDMKLRDDLERLKKIRNHRGLRHYWGVRVR 491 K+ RF +V +ERLK+IR +RG+RH G+ VR Sbjct: 102 ------------------KEKRFNRVA-----------IERLKEIRCYRGIRHKLGLPVR 132 Query: 492 GQ 497 GQ Sbjct: 133 GQ 134
>U25969:Os11g0582400 | Length = 392 Score = 28.5 bits (62), Expect = 5.5 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 6/67 (8%) Frame = +2 Query: 350 QEEGLQGRQVHPGGLQRRRHEAQGRP*EAQEDQEPPWSSSLLGRACPWSAHQDYRQ---- 517 QE+ H GG + R E +G ++ PW R C W H+ + Sbjct: 70 QEDDDDDENTHGGGGKECRRECRGY-------RDEPWRKQECMRQCEWRRHEQHHHGGGH 122 Query: 518 --ERKDC 532 R DC Sbjct: 123 GGSRPDC 129
>AK108352:Os11g0582400 | Length = 392 Score = 28.5 bits (62), Expect = 5.5 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 6/67 (8%) Frame = +2 Query: 350 QEEGLQGRQVHPGGLQRRRHEAQGRP*EAQEDQEPPWSSSLLGRACPWSAHQDYRQ---- 517 QE+ H GG + R E +G ++ PW R C W H+ + Sbjct: 70 QEDDDDDENTHGGGGKECRRECRGY-------RDEPWRKQECMRQCEWRRHEQHHHGGGH 122 Query: 518 --ERKDC 532 R DC Sbjct: 123 GGSRPDC 129
>AK073083:Os11g0582400 | Length = 392 Score = 28.5 bits (62), Expect = 5.5 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 6/67 (8%) Frame = +2 Query: 350 QEEGLQGRQVHPGGLQRRRHEAQGRP*EAQEDQEPPWSSSLLGRACPWSAHQDYRQ---- 517 QE+ H GG + R E +G ++ PW R C W H+ + Sbjct: 70 QEDDDDDENTHGGGGKECRRECRGY-------RDEPWRKQECMRQCEWRRHEQHHHGGGH 122 Query: 518 --ERKDC 532 R DC Sbjct: 123 GGSRPDC 129
>AF516927:Os11g0582400 | Length = 392 Score = 28.5 bits (62), Expect = 5.5 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 6/67 (8%) Frame = +2 Query: 350 QEEGLQGRQVHPGGLQRRRHEAQGRP*EAQEDQEPPWSSSLLGRACPWSAHQDYRQ---- 517 QE+ H GG + R E +G ++ PW R C W H+ + Sbjct: 70 QEDDDDDENTHGGGGKECRRECRGY-------RDEPWRKQECMRQCEWRRHEQHHHGGGH 122 Query: 518 --ERKDC 532 R DC Sbjct: 123 GGSRPDC 129
>AF049348:Os11g0582400 | Length = 392 Score = 28.5 bits (62), Expect = 5.5 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 6/67 (8%) Frame = +2 Query: 350 QEEGLQGRQVHPGGLQRRRHEAQGRP*EAQEDQEPPWSSSLLGRACPWSAHQDYRQ---- 517 QE+ H GG + R E +G ++ PW R C W H+ + Sbjct: 70 QEDDDDDENTHGGGGKECRRECRGY-------RDEPWRKQECMRQCEWRRHEQHHHGGGH 122 Query: 518 --ERKDC 532 R DC Sbjct: 123 GGSRPDC 129 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,095,161 Number of extensions: 392496 Number of successful extensions: 1199 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1198 Number of HSP's successfully gapped: 10 Length of query: 263 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 164 Effective length of database: 11,435,796 Effective search space: 1875470544 Effective search space used: 1875470544 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
