>LOC_Os02g38200:12002.t03458:unspliced-genomic isocitrate dehydrogenase subunit 1, mitochondrial precursor,|
putative, expressed
Length = 3460
Score = 341 bits (738), Expect(6) = 0.0
Identities = 142/152 (93%), Positives = 147/152 (96%)
Frame = +3 / +2
Query: 183 AVSRRTVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVRQVMEAMHAPVCFETYEVHGDMP 362
AVSRRTVTYMPRPGDGAPR VTLIPGDGIGPLVTGAVRQVMEAMHAPV FE+YEV GDMP
Sbjct: 200 AVSRRTVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVRQVMEAMHAPVYFESYEVRGDMP 379
Query: 363 SVPTEVIESIRRNKVCLKGGLATPVGGGVSSLNLQLRKELDLYASLVNCFNLPGLPTRHE 542
+VP EVI+SIRRNKVCLKGGLATPVGGGVSSLN+QLRKELDLYASLVNCFNLPGLPTRH+
Sbjct: 380 TVPPEVIDSIRRNKVCLKGGLATPVGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHD 559
Query: 543 NVDIAVIRENTEGEYSGLEHEVVPGVVESLKV 638
NVDI VIRENTEGEYSGLEHEVVPGVVESLKV
Sbjct: 560 NVDIVVIRENTEGEYSGLEHEVVPGVVESLKV 655
Score = 195 bits (421), Expect(6) = 0.0
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3 / +1
Query: 636 VMTKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIQYNE 815
V+TKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIQYNE
Sbjct: 1846 VITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIQYNE 2025
Query: 816 IIVDNCCMQLVAKPEQFDVMVT 881
IIVDNCCMQLVAKPEQFDVMV+
Sbjct: 2026 IIVDNCCMQLVAKPEQFDVMVS 2091
Score = 182 bits (392), Expect(6) = 0.0
Identities = 80/95 (84%), Positives = 86/95 (90%)
Frame = +3 / +1
Query: 966 QDHAVFEQGASAGNVGNDKILQQKKANPVALFLSSAMMLRHLQFPSFADRLESAVKGVIA 1145
QDHAVFEQGASAGNVGN K+++QKKANPVAL LSSAMMLRHLQFPSFADRLE+AVK VIA
Sbjct: 2809 QDHAVFEQGASAGNVGNVKVVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIA 2988
Query: 1146 EGKYRTRDLGGTSTTQEVTDAVIAKLD*PPIACFL 1250
EGKYRT+DLGG+STTQEVTDAVIA LD* C L
Sbjct: 2989 EGKYRTKDLGGSSTTQEVTDAVIAHLD*LLAGCVL 3093
Score = 66.1 bits (138), Expect(6) = 0.0
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 875 GHPKSLWQPGVQCGCRYCWGHWCHAWR 955
GH KSLWQ G GCRYCW HWCHAWR
Sbjct: 2427 GHAKSLWQSGG*HGCRYCWRHWCHAWR 2507
Score = 43.2 bits (88), Expect(6) = 0.0
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 76 PIASTPKP*PDSPWRGDPPLSS 141
PIAS KP* PWRGDPPLSS
Sbjct: 72 PIASASKP*TRRPWRGDPPLSS 137
Score = 29.0 bits (57), Expect(6) = 0.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1 / +1
Query: 1267 PLGLVC*S*MIFIDCSVRLSFCSANHC 1347
P GL *S +IF+ SVR SF S+ C
Sbjct: 3109 PFGLGV*SRLIFVSYSVRSSFRSSQPC 3189
Score = 280 bits (606), Expect(6) = e-178
Identities = 126/151 (83%), Positives = 129/151 (85%)
Frame = -3 / -2
Query: 637 TLRLSTTPGTTSCSRPEYSPSVFSLMTAMSTFSCLVGSPGRLKQLTREAXXXXXXXXXXX 458
TLRLSTTPGTTSCS PEYSPSVFSLMT MST SCLVGSPGRLKQLTREA
Sbjct: 654 TLRLSTTPGTTSCSSPEYSPSVFSLMTTMSTLSCLVGSPGRLKQLTREA*RSSSLRSCTL 475
Query: 457 REETPPPTGVARPPLRQTLLRRMDSMTSVGTDGMSPWTSYVSKQTGACIASITWRTAPVT 278
REETPPPTGVARPPLRQTLLRRM+SMTS GT GMSP TS SK TGAC+ASIT RTAPVT
Sbjct: 474 REETPPPTGVARPPLRQTLLRRMESMTSGGTVGMSPRTS*DSK*TGACMASITCRTAPVT 295
Query: 277 RGPMPSPGMSVTVRGAPSPGRGM*VTVRRDT 185
RGPMPSPGMSVT RGAPSPGRGM*VTVRR+T
Sbjct: 294 RGPMPSPGMSVTARGAPSPGRGM*VTVRRET 202
Score = 179 bits (385), Expect(6) = e-178
Identities = 78/82 (95%), Positives = 80/82 (97%)
Frame = -3 / -3
Query: 880 VTITSNCSGFATSCIQQLSTMISLY*IPGYFVATSRQDSRNKPSASFMMFALCTAVTFFL 701
+TITSNCSG ATSCIQQLSTMISLY*IPGYFVATSRQDS+NKPSASFMMFALCTAVTFFL
Sbjct: 2090 LTITSNCSGLATSCIQQLSTMISLY*IPGYFVATSRQDSKNKPSASFMMFALCTAVTFFL 1911
Query: 700 LLR*AYSKAYLAILSEQNFVIT 635
LLR AYSKAYLAILSEQNFVIT
Sbjct: 1910 LLRYAYSKAYLAILSEQNFVIT 1845
Score = 172 bits (370), Expect(6) = e-178
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = -3 / -3
Query: 1228 *SSLAITASVTSWVVLVPPKSLVLYLPSAMTPFTADSSRSANDGNCKCLSIMADERNRAT 1049
*S AITASVTS VVL+PPKSLVLYLPSAMT FTA SSRSANDGNCKC +IMADER+RAT
Sbjct: 3071 *SRCAITASVTSCVVLLPPKSLVLYLPSAMTRFTAVSSRSANDGNCKCRNIMADERSRAT 2892
Query: 1048 GLAFFCCRILSFPTFPAEAPCSKTAWS 968
GLAFFC L+FPTFPAEAPCSKTAWS
Sbjct: 2891 GLAFFCSTTLTFPTFPAEAPCSKTAWS 2811
Score = 50.6 bits (104), Expect(6) = e-178
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = -1 / -1
Query: 954 LQA*HQCPQQYLQPHWTPGCHKDLG*P 874
LQA*HQC QQYLQP P CHKDL *P
Sbjct: 2506 LQA*HQCLQQYLQPC*PPDCHKDLA*P 2426
Score = 35.0 bits (70), Expect(6) = e-178
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 126 IAAPW*VRLGFRGGCD 79
IAAPW RLGF GGCD
Sbjct: 122 IAAPWPPRLGFGGGCD 75
Score = 27.2 bits (53), Expect(6) = e-178
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 1334 EQKDNLTLQSMKIIQD*QTSPRG 1266
E+ D+LTL KI +D* SP+G
Sbjct: 3176 ERNDDLTL*ETKISRD*TPSPKG 3108
Score = 141 bits (303), Expect(6) = e-101
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +2 / +3
Query: 635 GDDEVLL*KDCQIRL*VCLPQQ*KESDGSA*SKHHEAS*WFVPGVLP*GCDEVSWNSI** 814
GD +VLL*KDCQ+ *V +PQQ KESD A*SKHHEA *WF+ GVLP*GC++VSWNSI**
Sbjct: 1845 GDHKVLL*KDCQVCF*VRVPQQQKESDCRA*SKHHEAC*WFILGVLP*GCNKVSWNSI** 2024
Query: 815 NHCGQLLYAACCKT*TV*CYG 877
NH GQLLYAACC *T+*CYG
Sbjct: 2025 NHRGQLLYAACC*A*TI*CYG 2087
Score = 139 bits (299), Expect(6) = e-101
Identities = 56/92 (60%), Positives = 62/92 (67%)
Frame = +2 / +3
Query: 941 CHAWRQCWSGPCGL*AGCFCRKCWK**DSATEES*PRCSVSLVCHDAEAFAVPVICRPAG 1120
C +R C SGPC L A FCRKCWK EES*PRCS L+CHD AFA+P+I PAG
Sbjct: 2784 CTNFR*CGSGPCCLRARSFCRKCWKRQSCGAEES*PRCSAPLICHDVAAFAIPIIR*PAG 2963
Query: 1121 ISREGCHCRRQIQD*GFGRHQHHPGSHGCSDR 1216
E CH RRQ+Q+ GR QHH GSHGCSDR
Sbjct: 2964 DGGEACHRRRQVQNQRLGRQQHHAGSHGCSDR 3059
Score = 110 bits (234), Expect(6) = e-101
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = +2 / +1
Query: 326 LLRDVRGPRRHAIGAYRGHRVHPPQQGLPQGXXXXXXXXXCLLPQPAAAQGARPLRFPCQ 505
LLR +RGPRRHA G+ RGHR+HPPQQGLPQG CLLPQ AA QGARPLR P Q
Sbjct: 343 LLRVLRGPRRHADGSPRGHRLHPPQQGLPQGRPRHPSRRGCLLPQRAAPQGARPLRLPRQ 522
Query: 506 LLQPP 520
LLQPP
Sbjct: 523 LLQPP 537
Score = 40.5 bits (82), Expect(6) = e-101
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 876 VTPNLYGNLVSNVAAGIA 929
VTPNLYGNLV+N AAGIA
Sbjct: 2428 VTPNLYGNLVANTAAGIA 2481
Score = 28.6 bits (56), Expect(6) = e-101
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 1268 PSD*SASPE*FSLIVVLDCLFVQRITV 1348
P D* +SP+*FS ++ LD FV+ V
Sbjct: 3110 PLD*VSSPD*FSFLIALDHHFVRHSLV 3190
Score = 23.1 bits (44), Expect(6) = e-101
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 182 RRVPPYRHL 208
RR+PP+RHL
Sbjct: 199 RRLPPHRHL 225
Score = 144 bits (308), Expect(5) = 1e-95
Identities = 62/81 (76%), Positives = 66/81 (81%)
Frame = -2 / -2
Query: 875 HNIKLFRFCNKLHTAVVHNDFIILNSRILRRNLTAGLQEQTIS*LHDVCFMHCRHFLSIV 696
HNIKLFR NKLHT VVH+DFIILNSRIL NLTA LQE TIS LHDVCFMH HFLS+V
Sbjct: 2085 HNIKLFRLSNKLHTTVVHDDFIILNSRILCCNLTARLQE*TISKLHDVCFMHGSHFLSVV 1906
Query: 695 EVSILKGVFGNPFRAELRHHL 633
EV +LK + GNPFRAEL HL
Sbjct: 1905 EVRVLKSILGNPFRAELCDHL 1843
Score = 128 bits (274), Expect(5) = 1e-95
Identities = 57/98 (58%), Positives = 66/98 (67%)
Frame = -1 / -1
Query: 1233 AANRV*RSLHP*LPGWCWCRPNP*SCICLLQ*HPSRLIPAGRQMTGTANASASWQTRETE 1054
A N+ RSLHP*LP WC CRP+ C CLL+*H S PAG++M G ANA+ SWQ R E
Sbjct: 3076 AINQDARSLHP*LPAWCCCRPSLWFCTCLLR*HASPPSPAGQRMMGIANAATSWQMRGAE 2897
Query: 1053 QRG*LSSVAESYHFQHFRQKHPAQRPHGPDQHCLQA*H 940
QRG*LSS + FQHF QK A+R HGPD H L+ H
Sbjct: 2896 QRG*LSSAPQL*RFQHFLQKLLARRQHGPDPHYLKFVH 2783
Score = 90.4 bits (191), Expect(5) = 1e-95
Identities = 45/86 (52%), Positives = 49/86 (56%)
Frame = -2 / -1
Query: 527 QPREVEAIDKGSVEVELLAQLQVEGGDTSADGRSETXXXXXXXXXXXXXXLGRHRWHVAV 348
QPREVEA+D+G VEVELLA+L VEGGDT AD E LG +R HVA
Sbjct: 544 QPREVEAVDEGGVEVELLAELHVEGGDTPADWGGEAALEADLVAADGVDDLGGNRRHVAA 365
Query: 347 DLVRLEADRRVHCXXXXXXXXXHEGP 270
DLV LE DRRVH EGP
Sbjct: 364 DLVGLEVDRRVHGLHHLPHGAGDEGP 287
Score = 57.0 bits (118), Expect(5) = 1e-95
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = -2 / -2
Query: 965 TNIASRHDTSAPSNTCSHIGHQVAIKIWGDHNIKLFRFC 849
+ SRHDTSA SNTCS + HQ+AIKIW D R C
Sbjct: 2517 SKFTSRHDTSASSNTCSRVSHQIAIKIWRDLQTHKTRAC 2401
Score = 24.9 bits (48), Expect(5) = 1e-95
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1 / -2
Query: 1332 TKRQSNTTINENHSGLAD*SEG 1267
TK SN NEN SGL *S+G
Sbjct: 3174 TK**SNAIRNENQSGLDT*SKG 3109
Score = 121 bits (258), Expect(4) = 2e-60
Identities = 56/74 (75%), Positives = 61/74 (82%)
Frame = +1 / +2
Query: 655 LKGLPNTPLSMLTSTIERK*RQCIKQTS*S*LMVCSWSPAVRLRRSILEFNIMKSLWTTA 834
LKGLP+ LS TST ERK* CIKQTS*S LMV SWS AVRL++SILEFNIMKS WTT
Sbjct: 1865 LKGLPSMLLSTRTSTTERK*LPCIKQTS*SLLMVYSWSLAVRLQQSILEFNIMKSSWTTV 2044
Query: 835 VCSLLQNLNSLMLW 876
VCSLL +LN+LMLW
Sbjct: 2045 VCSLLLSLNNLMLW 2086
Score = 114 bits (244), Expect(4) = 2e-60
Identities = 55/86 (63%), Positives = 61/86 (70%)
Frame = +1 / +2
Query: 958 MLVRTMRSLSRVLLPEMLEMIRFCNRRKLTPLLCFSRLP*C*GICSSRHLPTGWNQP*RV 1137
M VRTM S S+ LL EMLE + +RRKLTPLLC S LP*C GIC+S H TGW + * V
Sbjct: 2801 MWVRTMLSSSKELLQEMLETSKLWSRRKLTPLLCSSHLP*CCGICNSHHSLTGWRRR*SV 2980
Query: 1138 SLQKANTGLGIWAAPAPPRKSRMQ*S 1215
S QKA+T WAA AP RKSRMQ*S
Sbjct: 2981 SSQKASTEPKTWAAAAPRRKSRMQ*S 3058
Score = 39.6 bits (80), Expect(4) = 2e-60
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = +1 / +2
Query: 877 SPQIFMATWCPMWLQVLLGALVSCLE 954
S QIFMA W LQVLL ALVSCLE
Sbjct: 2429 SRQIFMAIWWLTRLQVLLEALVSCLE 2506
Score = 29.5 bits (58), Expect(4) = 2e-60
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / +3
Query: 496 PLSIASTSLGCPPG 537
P S ASTS GCPPG
Sbjct: 513 PSSTASTSRGCPPG 554
Score = 122 bits (262), Expect(3) = 3e-57
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = -1 / -1
Query: 876 P*HQTVQVLQQAAYSSCPQ*FHYIEFQDTSSQPHGRTPGTNHQLAS*CLLYALPSLSFYC 697
P*HQ VQ QQAAY+SCP+*FHYIEFQDT QPHG+TP NHQ AS*CLLYA SLSF C
Sbjct: 2086 P*HQIVQA*QQAAYNSCPR*FHYIEFQDTLLQPHGKTPRINHQQAS*CLLYARQSLSFCC 1907
Query: 696 *GKHTQRRIW 667
*G TQ+ W
Sbjct: 1906 *GTRTQKHTW 1877
Score = 122 bits (261), Expect(3) = 3e-57
Identities = 57/98 (58%), Positives = 67/98 (68%)
Frame = -2 / -2
Query: 1250 QKARNWRLIEFSDHCIRDFLGGAGAAQIPSPVFAFCNDTLHG*FQPVGK*RELQMPQHHG 1071
+ A +LI+ DHCIRDFL GA AAQ+ V AFC+DTLH QPV +* ELQMPQHHG
Sbjct: 3093 KNAAGQQLIKMRDHCIRDFLRGAAAAQVFGSVLAFCDDTLHRRLQPVSE*WELQMPQHHG 2914
Query: 1070 RREKQSNGVSFXXXXXXXXXXXSGRSTLLKDRMVLTNI 957
R E+QSNGVSF S RS+LL+D MVLT+I
Sbjct: 2913 R*EEQSNGVSFLLLHNFDVSNISCRSSLLEDSMVLTHI 2800
Score = 27.2 bits (53), Expect(3) = 3e-57
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 537 AWWAAQGG*SN*Q 499
AWWAA GG*S+*+
Sbjct: 554 AWWAAPGG*SS*R 516
Score = 37.3 bits (75), Expect = 0.28
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = -3 / -3
Query: 928 AIPAATLDTRLP*RFGVTITSNCSGFATSCIQQLSTMISL 809
AIPAA L TRLP*RFGVT A S + S + L
Sbjct: 2480 AIPAAVLATRLP*RFGVTYKHTKQEHAKSKVPS*SNKLDL 2361
>LOC_Os04g40310:12004.t03595:unspliced-genomic isocitrate dehydrogenase subunit 1, mitochondrial precursor,|
putative, expressed
Length = 3814
Score = 325 bits (705), Expect(4) = 0.0
Identities = 136/153 (88%), Positives = 142/153 (92%)
Frame = +3 / +2
Query: 180 GAVSRRTVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVRQVMEAMHAPVCFETYEVHGDM 359
GA +RRTVTYMPRPGDG PR VTLIPGDGIGPLVTGAV+QVME MHAPV FETYEV GDM
Sbjct: 227 GAGARRTVTYMPRPGDGNPRAVTLIPGDGIGPLVTGAVQQVMEVMHAPVYFETYEVRGDM 406
Query: 360 PSVPTEVIESIRRNKVCLKGGLATPVGGGVSSLNLQLRKELDLYASLVNCFNLPGLPTRH 539
P+VP VIESIRRNKVCLKGGLATPVGGGVSSLN+QLRKELDLYASLVNC N PGLPTRH
Sbjct: 407 PTVPPAVIESIRRNKVCLKGGLATPVGGGVSSLNMQLRKELDLYASLVNCSNFPGLPTRH 586
Query: 540 ENVDIAVIRENTEGEYSGLEHEVVPGVVESLKV 638
++VDI VIRENTEGEYSGLEHEVVPGVVESLKV
Sbjct: 587 QDVDIVVIRENTEGEYSGLEHEVVPGVVESLKV 685
Score = 194 bits (418), Expect(4) = 0.0
Identities = 80/87 (91%), Positives = 84/87 (96%)
Frame = +3 / +3
Query: 633 KVMTKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIQYN 812
+V+TKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA+KYPGIQYN
Sbjct: 1626 QVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVASKYPGIQYN 1805
Query: 813 EIIVDNCCMQLVAKPEQFDVMVTPNLY 893
EIIVDNCCMQLVAKPEQFDVMV L+
Sbjct: 1806 EIIVDNCCMQLVAKPEQFDVMVCSLLH 1886
Score = 188 bits (404), Expect(4) = 0.0
Identities = 82/96 (85%), Positives = 87/96 (90%)
Frame = +3 / +3
Query: 966 QDHAVFEQGASAGNVGNDKILQQKKANPVALFLSSAMMLRHLQFPSFADRLESAVKGVIA 1145
QDHAVFEQGASAGNVGN+ IL+QKKANP+AL LSSAMMLRHLQFPSFADRLE+AVK VIA
Sbjct: 3198 QDHAVFEQGASAGNVGNENILEQKKANPIALLLSSAMMLRHLQFPSFADRLETAVKRVIA 3377
Query: 1146 EGKYRTRDLGGTSTTQEVTDAVIAKLD*PPIACFLR 1253
EGKYRT+DLGGTSTTQEVTDAVIA LD* P LR
Sbjct: 3378 EGKYRTKDLGGTSTTQEVTDAVIANLD*IPAGARLR 3485
Score = 47.3 bits (97), Expect(4) = 0.0
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 875 GHPKSLWQPGVQCGCRYCWGHWCHAWR 955
G+ K LWQ G GCRYCW C+AWR
Sbjct: 2798 GYTKPLWQFGC*HGCRYCWRDRCYAWR 2878
Score = 249 bits (539), Expect(4) = e-162
Identities = 114/149 (76%), Positives = 119/149 (79%)
Frame = -3 / -2
Query: 637 TLRLSTTPGTTSCSRPEYSPSVFSLMTAMSTFSCLVGSPGRLKQLTREAXXXXXXXXXXX 458
TLRLSTTPGTTSCS PEYSPSVFSLMT MST CLVG PG+L+QLT EA
Sbjct: 684 TLRLSTTPGTTSCSSPEYSPSVFSLMTTMSTSWCLVGRPGKLEQLTSEA*RSSSLRSCML 505
Query: 457 REETPPPTGVARPPLRQTLLRRMDSMTSVGTDGMSPWTSYVSKQTGACIASITWRTAPVT 278
REETPPPTGVARPPLR TLLRRMDSMT+ GT GMSP TS VSK TGACI SIT TAPVT
Sbjct: 504 REETPPPTGVARPPLRHTLLRRMDSMTAGGTVGMSPRTS*VSK*TGACITSITCCTAPVT 325
Query: 277 RGPMPSPGMSVTVRGAPSPGRGM*VTVRR 191
GP+PSPG+SVT RG PSPG GM*VTVRR
Sbjct: 324 SGPIPSPGISVTARGFPSPGLGM*VTVRR 238
Score = 179 bits (385), Expect(4) = e-162
Identities = 75/96 (78%), Positives = 83/96 (86%)
Frame = -3 / -1
Query: 1255 SLKKHAIGG*SSLAITASVTSWVVLVPPKSLVLYLPSAMTPFTADSSRSANDGNCKCLSI 1076
SL++ G *S LAITASVTSWVVLVPP+S VLYLPSAMT FTA SSRSANDGNCKCL+I
Sbjct: 3487 SLRRAPAGI*SRLAITASVTSWVVLVPPRSFVLYLPSAMTRFTAVSSRSANDGNCKCLNI 3308
Query: 1075 MADERNRATGLAFFCCRILSFPTFPAEAPCSKTAWS 968
MAD+R+ A G AFFC ++ SFPTFPAEAPCSKTAWS
Sbjct: 3307 MADDRSSAIGFAFFCSKMFSFPTFPAEAPCSKTAWS 3200
Score = 177 bits (380), Expect(4) = e-162
Identities = 77/81 (95%), Positives = 79/81 (97%)
Frame = -3 / -1
Query: 877 TITSNCSGFATSCIQQLSTMISLY*IPGYFVATSRQDSRNKPSASFMMFALCTAVTFFLL 698
T+TSNCSGFATSCIQQLSTMISLY*IPGYF ATSRQDS+NKPSASFMMFALCTAVTFF L
Sbjct: 1870 TMTSNCSGFATSCIQQLSTMISLY*IPGYFEATSRQDSKNKPSASFMMFALCTAVTFFRL 1691
Query: 697 LR*AYSKAYLAILSEQNFVIT 635
LR*AYSKAYLAILSEQNFVIT
Sbjct: 1690 LR*AYSKAYLAILSEQNFVIT 1628
Score = 42.8 bits (87), Expect(4) = e-162
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 953 SRHDTSAPSNTCSHIGHQVAIKIW 882
SRH+T SNTCS + +Q+AIK+W
Sbjct: 2876 SRHNTCPSSNTCSRVSNQIAIKVW 2805
Score = 142 bits (305), Expect(6) = 9e-89
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = -2 / -3
Query: 875 HNIKLFRFCNKLHTAVVHNDFIILNSRILRRNLTAGLQEQTIS*LHDVCFMHCRHFLSIV 696
H+IKL R CNKLHTAVV ND IILN+RIL NLTA QEQTIS LHDVCFMHC FLS+V
Sbjct: 1868 HDIKLLRLCNKLHTAVVDNDLIILNTRIL*GNLTARFQEQTISKLHDVCFMHCCDFLSVV 1689
Query: 695 EVSILKGVFGNPFRAELRHHL 633
+VSILK +FGNP RA+L +HL
Sbjct: 1688 KVSILKSIFGNPLRAKLCYHL 1626
Score = 129 bits (276), Expect(6) = 9e-89
Identities = 57/97 (58%), Positives = 63/97 (64%)
Frame = -1 / -2
Query: 1239 QLAANRV*RSLHP*LPGWCWCRPNP*SCICLLQ*HPSRLIPAGRQMTGTANASASWQTRE 1060
+L +N R LH *LPGWCWCR +P C CL Q*H S PAGR+MTGTANAS SW+ E
Sbjct: 3471 RLVSNPDWRLLHQ*LPGWCWCRLDPLFCTCLPQ*HASPPSPAGRRMTGTANASTSWRMIE 3292
Query: 1059 TEQRG*LSSVAESYHFQHFRQKHPAQRPHGPDQHCLQ 949
Q G LSS F+ F QKH AQR HGPD H LQ
Sbjct: 3291 AAQ*GLLSSALRCSRFRRFLQKHLAQRQHGPDPHYLQ 3181
Score = 79.0 bits (166), Expect(6) = 9e-89
Identities = 37/69 (53%), Positives = 41/69 (59%)
Frame = -2 / -1
Query: 518 EVEAIDKGSVEVELLAQLQVEGGDTSADGRSETXXXXXXXXXXXXXXLGRHRWHVAVDLV 339
EV A+D+ VEVELLA+L VEGGD +ADG E GRH HVA DLV
Sbjct: 565 EVGAVDERGVEVELLAELHVEGGDPAADGGGEAALEAHLVAADGLDDGGRHGGHVAADLV 386
Query: 338 RLEADRRVH 312
LE DRRVH
Sbjct: 385 GLEVDRRVH 359
Score = 39.1 bits (79), Expect(6) = 9e-89
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -1 / -2
Query: 954 LQA*HQCPQQYLQPHWTPGCHKDLG*P*HQT 862
LQA*H QQYLQP P CHK L *P +T
Sbjct: 2877 LQA*HLSLQQYLQPC*QPNCHKGLV*PTKRT 2785
Score = 26.7 bits (52), Expect(6) = 9e-89
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 271 PMPSPGMSVTVRGAPSP 221
P P GM VTVR AP+P
Sbjct: 276 PSPGLGM*VTVRRAPAP 226
Score = 25.8 bits (50), Expect(6) = 9e-89
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 650 ELRHHLEALDDARHD 606
E+ +LEALDDA HD
Sbjct: 697 EIGPYLEALDDAGHD 653
Score = 135 bits (289), Expect(4) = 2e-88
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +2 / +2
Query: 635 GDDEVLL*KDCQIRL*VCLPQQ*KESDGSA*SKHHEAS*WFVPGVLP*GCDEVSWNSI** 814
GD++VLL*+DCQI *VCLP Q KES SA*SKHHEA *WFV G+LP*GC +VSW S+**
Sbjct: 1628 GDNKVLL*EDCQICF*VCLP*QPKESHSSA*SKHHEAC*WFVLGILP*GCLKVSWYSV** 1807
Query: 815 NHCGQLLYAACCKT*TV*CYG 877
+HC QLLYA CCK * +*C+G
Sbjct: 1808 DHCRQLLYATCCKA*AI*CHG 1870
Score = 129 bits (276), Expect(4) = 2e-88
Identities = 55/88 (62%), Positives = 61/88 (69%)
Frame = +2 / +2
Query: 953 RQCWSGPCGL*AGCFCRKCWK**DSATEES*PRCSVSLVCHDAEAFAVPVICRPAGISRE 1132
R C SGPC L*A CFCRK K EES P C+ S++ HD EAFAVPVI RPAG E
Sbjct: 3185 R*CGSGPCCL*ARCFCRKRRKREHLRAEESKPYCAASIIRHDVEAFAVPVIRRPAGDGGE 3364
Query: 1133 GCHCRRQIQD*GFGRHQHHPGSHGCSDR 1216
CHC RQ+Q+ G RHQHHPGSH CS+R
Sbjct: 3365 ACHCGRQVQNKGSRRHQHHPGSH*CSNR 3448
Score = 95.0 bits (201), Expect(4) = 2e-88
Identities = 43/65 (66%), Positives = 45/65 (69%)
Frame = +2 / +1
Query: 326 LLRDVRGPRRHAIGAYRGHRVHPPQQGLPQGXXXXXXXXXCLLPQPAAAQGARPLRFPCQ 505
LLRD+RGPRRHA A R HRVHPPQQG+PQG LLPQ AA QGARPLR Q
Sbjct: 373 LLRDLRGPRRHAHRAARRHRVHPPQQGVPQGRPRHPRRRRGLLPQHAAPQGARPLRLARQ 552
Query: 506 LLQPP 520
LLQ P
Sbjct: 553 LLQLP 567
Score = 40.5 bits (82), Expect(4) = 2e-88
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 876 VTPNLYGNLVSNVAAGIA 929
VTPNLYGNLV+N AAGIA
Sbjct: 2799 VTPNLYGNLVANTAAGIA 2852
Score = 121 bits (259), Expect(4) = 9e-55
Identities = 51/70 (72%), Positives = 54/70 (77%)
Frame = -1 / -2
Query: 876 P*HQTVQVLQQAAYSSCPQ*FHYIEFQDTSSQPHGRTPGTNHQLAS*CLLYALPSLSFYC 697
P*HQ Q LQQ AYSSC Q* HY E+QDT QPHG+ P TNHQ AS*CLLYAL LSF C
Sbjct: 1869 P*HQIAQALQQVAYSSCRQ*SHYTEYQDTLRQPHGKIPRTNHQQAS*CLLYALL*LSFGC 1690
Query: 696 *GKHTQRRIW 667
*GKHTQ+ IW
Sbjct: 1689 *GKHTQKHIW 1660
Score = 101 bits (215), Expect(4) = 9e-55
Identities = 46/72 (63%), Positives = 49/72 (68%)
Frame = -2 / -3
Query: 1253 SQKARNWRLIEFSDHCIRDFLGGAGAAQIPSPVFAFCNDTLHG*FQPVGK*RELQMPQHH 1074
SQ W LI+ D+CI DFLGGAGAA I V AF NDTLH QPVG+*RELQMPQHH
Sbjct: 3485 SQACTGWYLIQIGDYCISDFLGGAGAA*ILCSVLAFRNDTLHRRLQPVGE*RELQMPQHH 3306
Query: 1073 GRREKQSNGVSF 1038
G KQ N V F
Sbjct: 3305 GG**KQRNRVCF 3270
Score = 35.0 bits (70), Expect(4) = 9e-55
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3 / -1
Query: 928 AIPAATLDTRLP*RFGVT 875
AIPAA L T+LP*RFGVT
Sbjct: 2851 AIPAAVLATKLP*RFGVT 2798
Score = 28.1 bits (55), Expect(4) = 9e-55
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 998 RSTLLKDRMVLTNI 957
RSTLLKD MVLT+I
Sbjct: 3230 RSTLLKDSMVLTHI 3189
Score = 117 bits (250), Expect(3) = 1e-53
Identities = 54/80 (67%), Positives = 65/80 (81%)
Frame = +1 / +1
Query: 655 LKGLPNTPLSMLTSTIERK*RQCIKQTS*S*LMVCSWSPAVRLRRSILEFNIMKSLWTTA 834
L+GLPN LSMLT T ERK +QCIKQTS*S LMVCSW+ AVRL +SIL F+IM+SL TTA
Sbjct: 1648 LRGLPNMLLSMLTLTTERKSQQCIKQTS*SLLMVCSWNLAVRLPQSILVFSIMRSLSTTA 1827
Query: 835 VCSLLQNLNSLMLWSPQIFM 894
VC+LLQ+L++LM W F+
Sbjct: 1828 VCNLLQSLSNLMSWYALYFI 1887
Score = 113 bits (241), Expect(3) = 1e-53
Identities = 57/89 (64%), Positives = 63/89 (70%)
Frame = +1 / +1
Query: 949 LEAMLVRTMRSLSRVLLPEMLEMIRFCNRRKLTPLLCFSRLP*C*GICSSRHLPTGWNQP 1128
L+ M VRTM SLS+VLL E E +RRK T L CF P*C*GICSSRH PTGW +
Sbjct: 3181 LQVMWVRTMLSLSKVLLQETSETRTS*SRRKQTLLRCFYHPP*C*GICSSRHSPTGWRRR 3360
Query: 1129 *RVSLQKANTGLGIWAAPAPPRKSRMQ*S 1215
* VSL+KA+T I AAPAPPRKS MQ*S
Sbjct: 3361 *SVSLRKASTEQRI*AAPAPPRKSLMQ*S 3447
Score = 29.5 bits (58), Expect(3) = 1e-53
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1 / +1
Query: 883 QIFMATWCPMWLQVLLGALVSCLE 954
Q FMA W LQVLL V CLE
Sbjct: 2806 QTFMAIWLLTRLQVLLEGQVLCLE 2877
>LOC_Os01g16900:12001.t01539:unspliced-genomic 3-isopropylmalate dehydrogenase, chloroplast precursor, putative,|
expressed
Length = 4823
Score = 119 bits (255), Expect(6) = 5e-80
Identities = 50/78 (64%), Positives = 63/78 (80%)
Frame = +3 / +3
Query: 375 EVIESIRRNKVCLKGGLATPVGGGVSSLNLQLRKELDLYASLVNCFNLPGLPTRHENVDI 554
E +ES+RRNKV LKG +ATP+G G SLNL LRKEL LYA++ C +LPG TR+++V++
Sbjct: 2733 ESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELGLYANVRPCNSLPGYKTRYDDVNL 2912
Query: 555 AVIRENTEGEYSGLEHEV 608
IRENTEGEYSGLEH+V
Sbjct: 2913 VTIRENTEGEYSGLEHQV 2966
Score = 84.9 bits (179), Expect(6) = 5e-80
Identities = 34/57 (59%), Positives = 46/57 (80%)
Frame = +3 / +3
Query: 603 EVVPGVVESLKVMTKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESC 773
+VV GVVESLK++T+ S R+A+YAF YA N R++V+A+HKANIM+ DGLFL+ C
Sbjct: 3039 QVVRGVVESLKIITRQASLRVAEYAFHYAKTNGRERVSAIHKANIMRKTDGLFLKVC 3209
Score = 80.8 bits (170), Expect(6) = 5e-80
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = +3 / +1
Query: 1032 QKKANPVALFLSSAMMLRHLQFPSFADRLESAVKGVIAEGKYRTRDLGGTSTTQEVTDAV 1211
Q ANP AL LS+ MMLRHLQF + ADR+ +A+ I+EGK+RT DLGG ++T + T AV
Sbjct: 4213 QNLANPTALMLSAVMMLRHLQFNNQADRIHNAILQTISEGKFRTADLGGKASTSDFTKAV 4392
Score = 51.5 bits (106), Expect(6) = 5e-80
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 759 FLESCREVATKYPGIQYNEIIVDNCCM 839
+ + CREVA KYP I Y E+I+DNCCM
Sbjct: 3293 YFQCCREVAEKYPEIVYEEVIIDNCCM 3373
Score = 45.1 bits (92), Expect(6) = 5e-80
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +3 / +3
Query: 837 MQLVAKPEQFDVMVTPNLYGNLVSNVAAGI 926
+QLV P FDV+V PNLYG+++S++ AG+
Sbjct: 3564 LQLVKNPGLFDVLVMPNLYGDIISDLCAGL 3653
Score = 32.7 bits (65), Expect(6) = 5e-80
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +3
Query: 246 TLIPGDGIGPLVTGAVRQV 302
TL PGDGIGP + +V+QV
Sbjct: 543 TLFPGDGIGPEIAESVKQV 599
Score = 44.1 bits (90), Expect(6) = 3e-22
Identities = 27/58 (46%), Positives = 31/58 (53%)
Frame = -3 / -2
Query: 778 SRQDSRNKPSASFMMFALCTAVTFFLLLR*AYSKAYLAILSEQNFVITLRLSTTPGTT 605
S+Q R +PS M+ ALC A T L A KAY A L VI +LSTTP TT
Sbjct: 3214 SKQTLRKRPSVFLMILALCIAETLSRPLVLA*WKAYSATLKLAWRVIIFKLSTTPLTT 3041
Score = 40.0 bits (81), Expect(6) = 3e-22
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -3 / -2
Query: 607 TSCSRPEYSPSVFSLMTAMSTFSCLVGSPGRLKQ 506
T CSRP YSPSVFS + T S V PGRL Q
Sbjct: 2965 T*CSRPLYSPSVFSRIVTRFTSSYRVLYPGRLLQ 2864
Score = 36.3 bits (73), Expect(6) = 3e-22
Identities = 26/59 (44%), Positives = 29/59 (49%)
Frame = -3 / -1
Query: 1210 TASVTSWVVLVPPKSLVLYLPSAMTPFTADSSRSANDGNCKCLSIMADERNRATGLAFF 1034
TA V S V PP+S VL PS M A RSA NCK +I+ RA G A F
Sbjct: 4391 TAFVKSEVDAFPPRSAVLNFPSEMVWRMALWIRSAWLLNCKWRNIITALSIRAVGFARF 4215
Score = 36.3 bits (73), Expect(6) = 3e-22
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -3 / -3
Query: 838 IQQLSTMISLY*IPGYFVATSRQ 770
IQQLS M S Y I GYF ATSRQ
Sbjct: 3372 IQQLSMMTSSYTISGYFSATSRQ 3304
Score = 32.2 bits (64), Expect(6) = 3e-22
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -3 / -2
Query: 895 P*RFGVTITSNCSGFATSC 839
P*RFG+T TS GF TSC
Sbjct: 3622 P*RFGITSTSKRPGFFTSC 3566
Score = 26.3 bits (51), Expect(6) = 3e-22
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3 / -2
Query: 301 TWRTAPVTRGPMPSPGMSVTVRGAP 227
T T GPMPSPG SV +P
Sbjct: 598 TCLTDSAISGPMPSPGKSVARTVSP 524
Score = 31.8 bits (63), Expect(2) = 0.48
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -2 / -3
Query: 1208 CIRDFLGGAGAAQIPSPVFAFCNDTLHG*FQPVGK*RELQMPQHHGRREKQSNGV 1044
C+R+ +A+I SP F + G PV ELQ+ QHH + +S V
Sbjct: 4389 CLREV*SRRLSAEISSPEFPLGDGLEDGVVDPVCLVIELQVAQHHNSTQHKSGRV 4225
Score = 28.1 bits (55), Expect(2) = 0.48
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1 / -3
Query: 894 HKDLG*P*HQTVQVLQQAAYSSCPQ 820
HKDL P HQ Q QAA C Q
Sbjct: 3621 HKDLASPVHQKDQDSSQAARGQCSQ 3547
>LOC_Os08g22790:12008.t02052:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 7530
Score = 31.8 bits (63), Expect(2) = 9.8
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 380 HRVHPPQQGLPQG 418
HR+H PQQG+PQG
Sbjct: 4481 HRLHGPQQGMPQG 4519
Score = 24.0 bits (46), Expect(2) = 9.8
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 354 DMPSVPTEVIE 386
DMP VP EVIE
Sbjct: 4258 DMPGVPREVIE 4290
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 515,565,365
Number of extensions: 8460982
Number of successful extensions: 44712
Number of sequences better than 10.0: 55
Length of query: 494
Length of database: 55,613,886
Length adjustment: 51
Effective length of query: 443
Effective length of database: 52,743,708
Effective search space: 23365462644
Effective search space used: 23365462644
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)