ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf8c24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060154.1| Oryza sativa (japonica cultivar-group) Os04g0574600 (Os04g0574600) mRNA, complete cds Length = 2274 Score = 720 bits (363), Expect = 0.0 Identities = 775/915 (84%) Strand = Plus / Plus Query: 233 cggaggcggcggggttccggtggacgtgtaacacctgtgccggcgaattcgattcgctgc 292 ||||||| ||||||| ||||||| || |||||||| ||| |||||||| ||||||| Sbjct: 301 cggaggctccggggttgaggtggacatgcaacacctgcgcctctgaattcgagtcgctgc 360 Query: 293 aggagcagcgcgagcacttcaaatccgatctccaccgcctcaacgttaagctgagtgttg 352 |||| ||||||||||||||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 361 aggaacagcgcgagcacttcaagtctgatctccatcgcctcaacgtcaagctgagcattg 420 Query: 353 ctggtaaatctattatcaaggaagaagatttggaaaaaattgattctgattctctgtttg 412 |||||||| |||||||||||||||| || || || ||| ||| | ||||||||||| | Sbjct: 421 ctggtaaaactattatcaaggaagatgacttagacaaagcagatcccgattctctgttcg 480 Query: 413 acgatttggaggtatctagtgtatctggttctgaggacgaacgggaagacgtacctgcat 472 | |||||||||||||||||||||||||| || ||||| |||| ||| | | ||||||| Sbjct: 481 atgatttggaggtatctagtgtatctggatcagaggatgaacttgaaaatgggcctgcat 540 Query: 473 cagatcaccggctctcagttaaaggcaaggaagacttcaggaagaaacnnnnnnnncatg 532 |||||| | ||||||| |||| ||||| ||| ||||||||||||| | Sbjct: 541 cagatcgtggtctctcagccaaagacaagggagaattcaggaagaaactttattttcgct 600 Query: 533 gtcattctggtgacactgtttctttttggagatgcgtactgttcaatgaacatgaagaac 592 |||||||||||||||| |||||| | ||||||||| ||||||| || ||||||||||| | Sbjct: 601 gtcattctggtgacacagtttctatctggagatgcatactgttgaaagaacatgaagagc 660 Query: 593 cattttttgactgcaaatctgggaaaatggaaagtcatggatctacatcatatgtgcatg 652 || |||| | |||| ||||| | | |||||||||||||||||| ||| ||| || | Sbjct: 661 cagttttcaatagcaagtctggtcagacagaaagtcatggatctacaccatttgtacaag 720 Query: 653 aagatgagatgataaatagagtgaagcagttggcatgtgaacctcgcaatgcatcgcatt 712 | ||||| ||| |||||||||||||| | ||| ||| ||| ||||| ||||||| | || Sbjct: 721 aggatgaaatgctaaatagagtgaagaatttgacatctgagcctcgtgatgcatcacgtt 780 Query: 713 tgaggatcattatattaacaagtggtggacattttgctggatgtgtttttgacggaaaca 772 ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 781 tgaggatcattctactaacaagtggtggacattttgctggatgtgtttttgatggaaact 840 Query: 773 aaatattagcaaacaaaacatttcataggtatgttgtaagggcaaaggctggaaagaggc 832 | | |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 cagtcatagcccataaaacatttcataggtatgttgtaagggcaaaggctggaaagaggc 900 Query: 833 agtctggaaaagatgctactggaaaggttgcacactcagcgggctcttctcttcgccgct 892 ||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||||||||| | Sbjct: 901 agtctgggaaagatgctactgggaaggttgcacattcagcaggctcatctcttcgccgtt 960 Query: 893 ataacgaagcagcattgaaaaaggaagttcaagaattaatagtttcttggaagccatact 952 |||| ||||| ||||||||||||||| ||||||||||||||| |||||||||| |||||| Sbjct: 961 ataatgaagcggcattgaaaaaggaaattcaagaattaatagcttcttggaagtcatact 1020 Query: 953 ttgacgcctgtgtttgtgtctatatatacgctccatcaaagaaccgccagatgctctttg 1012 ||||| ||||| ||||||| ||| || ||||| ||||||||||| || |||||||||| Sbjct: 1021 ttgacctttgtgtctgtgtctttatgtatgctccgtcaaagaaccgtcaaatgctctttg 1080 Query: 1013 atggggataaggctcaatctgtattgcaagcatgtgatattcgtccactccctttgactg 1072 ||||||||||| |||| || |||||||| || ||||||||||||||| |||| ||||||| Sbjct: 1081 atggggataagactcagtcggtattgcaggcttgtgatattcgtccaatcccattgactg 1140 Query: 1073 ttcatcgacccaccttgaaagaagcaaaacgcgtatacaataacctaacacagctctatt 1132 ||||||| ||||||||||| ||||||||||| |||| | ||||||||||||||||| || Sbjct: 1141 ttcatcggcccaccttgaaggaagcaaaacggttatatactaacctaacacagctctgtt 1200 Query: 1133 atgagacggaatgct 1147 |||||| |||||||| Sbjct: 1201 atgagatggaatgct 1215 Score = 295 bits (149), Expect = 3e-76 Identities = 227/253 (89%) Strand = Plus / Plus Query: 1291 tctaataatgcaactacacctctccatgaagctgcaaaggctggcaatgttgaacaaact 1350 |||||||||| ||| || ||||| || ||||| |||||| ||||||||| | | ||||| Sbjct: 1371 tctaataatgaaacaacgcctcttcacgaagcagcaaagtctggcaatgctcagcaaaca 1430 Query: 1351 ctggaattgctcgagcagggcttggatccttgtatcaaagatgagagaggaaagacacct 1410 ||||| ||||| |||||||| |||||||||||||| ||||||| |||||||| |||||| Sbjct: 1431 ctggagttgcttgagcagggtttggatccttgtattaaagatgcaagaggaaaaacacct 1490 Query: 1411 tacctgctggcttcagacaaagaagtcagaaatacattcagaagattcatggcgctcaac 1470 ||| |||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1491 tacttgctggcttcggacaaagaagttagaaatacattcagaagatttatggcactcaac 1550 Query: 1471 cttgacaaatgggattggcatgctgctgatgtgcctagtgcattaacaaaggaaatggaa 1530 || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1551 ctagacaaatgggattggcatgcggctgatgtgcctagtgcactaacaaaggaaatggaa 1610 Query: 1531 gaatcacaagctg 1543 ||||||||||||| Sbjct: 1611 gaatcacaagctg 1623 Score = 117 bits (59), Expect = 2e-22 Identities = 101/115 (87%) Strand = Plus / Plus Query: 1918 tgttcatgctgtttttcgtccctggcaggcaaagtgcccttccataggtacagctacaag 1977 ||||| ||||||||||| ||| ||| |||||||| || ||||| ||||||| |||||| Sbjct: 2019 tgttcgtgctgtttttcttccttggtcggcaaagtaccattccacaggtacaattacaag 2078 Query: 1978 tactgcagcactacgtgtatgcatctccattcagaaatgctggaagatgactgag 2032 ||||||||||| || ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 2079 tactgcagcaccacatgtatgcatcttcattcagaaatgctggaagatgattgag 2133 Score = 97.6 bits (49), Expect = 2e-16 Identities = 76/85 (89%) Strand = Plus / Plus Query: 44 cctcctcctccccccagatggcggcggccgcgccggagaagagacctccgcgctcgctct 103 ||||||||||| |||||||||||||||| ||||||||| || ||||| |||||||||| Sbjct: 115 cctcctcctcctaccagatggcggcggcctcgccggagagcaggcctcctcgctcgctct 174 Query: 104 tcgaccttcccccggacttcttcga 128 ||||||| ||| ||||||||||||| Sbjct: 175 tcgacctccccgcggacttcttcga 199 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1774 ctcgccgacgaaagagagaaacgagcagcggcagcggaaagaaga 1818 |||||||| |||||||||||| ||||||| ||||| ||||||||| Sbjct: 1881 ctcgccgaggaaagagagaaaagagcagccgcagccgaaagaaga 1925 Score = 50.1 bits (25), Expect = 0.034 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1681 caaatgggcaaaccaactgcttctgtgccaggcctgaaaca 1721 ||||||| ||| ||||||||||| |||||||||||||||| Sbjct: 1782 caaatggccaatgcaactgcttctatgccaggcctgaaaca 1822
>dbj|AK121410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132O07, full insert sequence Length = 2278 Score = 720 bits (363), Expect = 0.0 Identities = 775/915 (84%) Strand = Plus / Plus Query: 233 cggaggcggcggggttccggtggacgtgtaacacctgtgccggcgaattcgattcgctgc 292 ||||||| ||||||| ||||||| || |||||||| ||| |||||||| ||||||| Sbjct: 305 cggaggctccggggttgaggtggacatgcaacacctgcgcctctgaattcgagtcgctgc 364 Query: 293 aggagcagcgcgagcacttcaaatccgatctccaccgcctcaacgttaagctgagtgttg 352 |||| ||||||||||||||||| || |||||||| ||||||||||| |||||||| ||| Sbjct: 365 aggaacagcgcgagcacttcaagtctgatctccatcgcctcaacgtcaagctgagcattg 424 Query: 353 ctggtaaatctattatcaaggaagaagatttggaaaaaattgattctgattctctgtttg 412 |||||||| |||||||||||||||| || || || ||| ||| | ||||||||||| | Sbjct: 425 ctggtaaaactattatcaaggaagatgacttagacaaagcagatcccgattctctgttcg 484 Query: 413 acgatttggaggtatctagtgtatctggttctgaggacgaacgggaagacgtacctgcat 472 | |||||||||||||||||||||||||| || ||||| |||| ||| | | ||||||| Sbjct: 485 atgatttggaggtatctagtgtatctggatcagaggatgaacttgaaaatgggcctgcat 544 Query: 473 cagatcaccggctctcagttaaaggcaaggaagacttcaggaagaaacnnnnnnnncatg 532 |||||| | ||||||| |||| ||||| ||| ||||||||||||| | Sbjct: 545 cagatcgtggtctctcagccaaagacaagggagaattcaggaagaaactttattttcgct 604 Query: 533 gtcattctggtgacactgtttctttttggagatgcgtactgttcaatgaacatgaagaac 592 |||||||||||||||| |||||| | ||||||||| ||||||| || ||||||||||| | Sbjct: 605 gtcattctggtgacacagtttctatctggagatgcatactgttgaaagaacatgaagagc 664 Query: 593 cattttttgactgcaaatctgggaaaatggaaagtcatggatctacatcatatgtgcatg 652 || |||| | |||| ||||| | | |||||||||||||||||| ||| ||| || | Sbjct: 665 cagttttcaatagcaagtctggtcagacagaaagtcatggatctacaccatttgtacaag 724 Query: 653 aagatgagatgataaatagagtgaagcagttggcatgtgaacctcgcaatgcatcgcatt 712 | ||||| ||| |||||||||||||| | ||| ||| ||| ||||| ||||||| | || Sbjct: 725 aggatgaaatgctaaatagagtgaagaatttgacatctgagcctcgtgatgcatcacgtt 784 Query: 713 tgaggatcattatattaacaagtggtggacattttgctggatgtgtttttgacggaaaca 772 ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 785 tgaggatcattctactaacaagtggtggacattttgctggatgtgtttttgatggaaact 844 Query: 773 aaatattagcaaacaaaacatttcataggtatgttgtaagggcaaaggctggaaagaggc 832 | | |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 cagtcatagcccataaaacatttcataggtatgttgtaagggcaaaggctggaaagaggc 904 Query: 833 agtctggaaaagatgctactggaaaggttgcacactcagcgggctcttctcttcgccgct 892 ||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||||||||| | Sbjct: 905 agtctgggaaagatgctactgggaaggttgcacattcagcaggctcatctcttcgccgtt 964 Query: 893 ataacgaagcagcattgaaaaaggaagttcaagaattaatagtttcttggaagccatact 952 |||| ||||| ||||||||||||||| ||||||||||||||| |||||||||| |||||| Sbjct: 965 ataatgaagcggcattgaaaaaggaaattcaagaattaatagcttcttggaagtcatact 1024 Query: 953 ttgacgcctgtgtttgtgtctatatatacgctccatcaaagaaccgccagatgctctttg 1012 ||||| ||||| ||||||| ||| || ||||| ||||||||||| || |||||||||| Sbjct: 1025 ttgacctttgtgtctgtgtctttatgtatgctccgtcaaagaaccgtcaaatgctctttg 1084 Query: 1013 atggggataaggctcaatctgtattgcaagcatgtgatattcgtccactccctttgactg 1072 ||||||||||| |||| || |||||||| || ||||||||||||||| |||| ||||||| Sbjct: 1085 atggggataagactcagtcggtattgcaggcttgtgatattcgtccaatcccattgactg 1144 Query: 1073 ttcatcgacccaccttgaaagaagcaaaacgcgtatacaataacctaacacagctctatt 1132 ||||||| ||||||||||| ||||||||||| |||| | ||||||||||||||||| || Sbjct: 1145 ttcatcggcccaccttgaaggaagcaaaacggttatatactaacctaacacagctctgtt 1204 Query: 1133 atgagacggaatgct 1147 |||||| |||||||| Sbjct: 1205 atgagatggaatgct 1219 Score = 295 bits (149), Expect = 3e-76 Identities = 227/253 (89%) Strand = Plus / Plus Query: 1291 tctaataatgcaactacacctctccatgaagctgcaaaggctggcaatgttgaacaaact 1350 |||||||||| ||| || ||||| || ||||| |||||| ||||||||| | | ||||| Sbjct: 1375 tctaataatgaaacaacgcctcttcacgaagcggcaaagtctggcaatgctcagcaaaca 1434 Query: 1351 ctggaattgctcgagcagggcttggatccttgtatcaaagatgagagaggaaagacacct 1410 ||||| ||||| |||||||| |||||||||||||| ||||||| |||||||| |||||| Sbjct: 1435 ctggagttgcttgagcagggtttggatccttgtattaaagatgcaagaggaaaaacacct 1494 Query: 1411 tacctgctggcttcagacaaagaagtcagaaatacattcagaagattcatggcgctcaac 1470 ||| |||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1495 tacttgctggcttcggacaaagaagttagaaatacattcagaagatttatggcactcaac 1554 Query: 1471 cttgacaaatgggattggcatgctgctgatgtgcctagtgcattaacaaaggaaatggaa 1530 || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1555 ctagacaaatgggattggcatgcggctgatgtgcctagtgcactaacaaaggaaatggaa 1614 Query: 1531 gaatcacaagctg 1543 ||||||||||||| Sbjct: 1615 gaatcacaagctg 1627 Score = 117 bits (59), Expect = 2e-22 Identities = 101/115 (87%) Strand = Plus / Plus Query: 1918 tgttcatgctgtttttcgtccctggcaggcaaagtgcccttccataggtacagctacaag 1977 ||||| ||||||||||| ||| ||| |||||||| || ||||| ||||||| |||||| Sbjct: 2023 tgttcgtgctgtttttcttccttggtcggcaaagtaccattccacaggtacaattacaag 2082 Query: 1978 tactgcagcactacgtgtatgcatctccattcagaaatgctggaagatgactgag 2032 ||||||||||| || ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 2083 tactgcagcaccacatgtatgcatcttcattcagaaatgctggaagatgattgag 2137 Score = 97.6 bits (49), Expect = 2e-16 Identities = 76/85 (89%) Strand = Plus / Plus Query: 44 cctcctcctccccccagatggcggcggccgcgccggagaagagacctccgcgctcgctct 103 ||||||||||| |||||||||||||||| ||||||||| || ||||| |||||||||| Sbjct: 119 cctcctcctcctaccagatggcggcggcctcgccggagagcaggcctcctcgctcgctct 178 Query: 104 tcgaccttcccccggacttcttcga 128 ||||||| ||| ||||||||||||| Sbjct: 179 tcgacctccccgcggacttcttcga 203 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1774 ctcgccgacgaaagagagaaacgagcagcggcagcggaaagaaga 1818 |||||||| |||||||||||| ||||||| ||||| ||||||||| Sbjct: 1885 ctcgccgaggaaagagagaaaagagcagccgcagccgaaagaaga 1929 Score = 50.1 bits (25), Expect = 0.034 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1681 caaatgggcaaaccaactgcttctgtgccaggcctgaaaca 1721 ||||||| ||| ||||||||||| |||||||||||||||| Sbjct: 1786 caaatggccaatgcaactgcttctatgccaggcctgaaaca 1826
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 295 bits (149), Expect = 3e-76 Identities = 227/253 (89%) Strand = Plus / Plus Query: 1291 tctaataatgcaactacacctctccatgaagctgcaaaggctggcaatgttgaacaaact 1350 |||||||||| ||| || ||||| || ||||| |||||| ||||||||| | | ||||| Sbjct: 28900897 tctaataatgaaacaacgcctcttcacgaagcagcaaagtctggcaatgctcagcaaaca 28900956 Query: 1351 ctggaattgctcgagcagggcttggatccttgtatcaaagatgagagaggaaagacacct 1410 ||||| ||||| |||||||| |||||||||||||| ||||||| |||||||| |||||| Sbjct: 28900957 ctggagttgcttgagcagggtttggatccttgtattaaagatgcaagaggaaaaacacct 28901016 Query: 1411 tacctgctggcttcagacaaagaagtcagaaatacattcagaagattcatggcgctcaac 1470 ||| |||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 28901017 tacttgctggcttcggacaaagaagttagaaatacattcagaagatttatggcactcaac 28901076 Query: 1471 cttgacaaatgggattggcatgctgctgatgtgcctagtgcattaacaaaggaaatggaa 1530 || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 28901077 ctagacaaatgggattggcatgcggctgatgtgcctagtgcactaacaaaggaaatggaa 28901136 Query: 1531 gaatcacaagctg 1543 ||||||||||||| Sbjct: 28901137 gaatcacaagctg 28901149 Score = 242 bits (122), Expect = 4e-60 Identities = 206/234 (88%) Strand = Plus / Plus Query: 914 aggaagttcaagaattaatagtttcttggaagccatactttgacgcctgtgtttgtgtct 973 ||||| ||||||||||||||| |||||||||| ||||||||||| ||||| ||||||| Sbjct: 28900508 aggaaattcaagaattaatagcttcttggaagtcatactttgacctttgtgtctgtgtct 28900567 Query: 974 atatatacgctccatcaaagaaccgccagatgctctttgatggggataaggctcaatctg 1033 ||| || ||||| ||||||||||| || ||||||||||||||||||||| |||| || | Sbjct: 28900568 ttatgtatgctccgtcaaagaaccgtcaaatgctctttgatggggataagactcagtcgg 28900627 Query: 1034 tattgcaagcatgtgatattcgtccactccctttgactgttcatcgacccaccttgaaag 1093 ||||||| || ||||||||||||||| |||| |||||||||||||| ||||||||||| | Sbjct: 28900628 tattgcaggcttgtgatattcgtccaatcccattgactgttcatcggcccaccttgaagg 28900687 Query: 1094 aagcaaaacgcgtatacaataacctaacacagctctattatgagacggaatgct 1147 |||||||||| |||| | ||||||||||||||||| |||||||| |||||||| Sbjct: 28900688 aagcaaaacggttatatactaacctaacacagctctgttatgagatggaatgct 28900741 Score = 238 bits (120), Expect = 7e-59 Identities = 352/432 (81%) Strand = Plus / Plus Query: 340 aagctgagtgttgctggtaaatctattatcaaggaagaagatttggaaaaaattgattct 399 |||||||| ||||||||||| |||||||||||||||| || || || ||| ||| | Sbjct: 28899555 aagctgagcattgctggtaaaactattatcaaggaagatgacttagacaaagcagatccc 28899614 Query: 400 gattctctgtttgacgatttggaggtatctagtgtatctggttctgaggacgaacgggaa 459 ||||||||||| || |||||||||||||||||||||||||| || ||||| |||| ||| Sbjct: 28899615 gattctctgttcgatgatttggaggtatctagtgtatctggatcagaggatgaacttgaa 28899674 Query: 460 gacgtacctgcatcagatcaccggctctcagttaaaggcaaggaagacttcaggaagaaa 519 | | ||||||||||||| | ||||||| |||| ||||| ||| |||||||||||| Sbjct: 28899675 aatgggcctgcatcagatcgtggtctctcagccaaagacaagggagaattcaggaagaaa 28899734 Query: 520 cnnnnnnnncatggtcattctggtgacactgtttctttttggagatgcgtactgttcaat 579 | | |||||||||||||||| |||||| | ||||||||| ||||||| || Sbjct: 28899735 ctttattttcgctgtcattctggtgacacagtttctatctggagatgcatactgttgaaa 28899794 Query: 580 gaacatgaagaaccattttttgactgcaaatctgggaaaatggaaagtcatggatctaca 639 ||||||||||| ||| |||| | |||| ||||| | | |||||||||||||||||| Sbjct: 28899795 gaacatgaagagccagttttcaatagcaagtctggtcagacagaaagtcatggatctaca 28899854 Query: 640 tcatatgtgcatgaagatgagatgataaatagagtgaagcagttggcatgtgaacctcgc 699 ||| ||| || || ||||| ||| |||||||||||||| | ||| ||| ||| ||||| Sbjct: 28899855 ccatttgtacaagaggatgaaatgctaaatagagtgaagaatttgacatctgagcctcgt 28899914 Query: 700 aatgcatcgcatttgaggatcattatattaacaagtggtggacattttgctggatgtgtt 759 ||||||| | ||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 28899915 gatgcatcacgtttgaggatcattctactaacaagtggtggacattttgctggatgtgtt 28899974 Query: 760 tttgacggaaac 771 ||||| |||||| Sbjct: 28899975 tttgatggaaac 28899986 Score = 172 bits (87), Expect = 3e-39 Identities = 111/119 (93%) Strand = Plus / Plus Query: 798 taggtatgttgtaagggcaaaggctggaaagaggcagtctggaaaagatgctactggaaa 857 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 28900239 taggtatgttgtaagggcaaaggctggaaagaggcagtctgggaaagatgctactgggaa 28900298 Query: 858 ggttgcacactcagcgggctcttctcttcgccgctataacgaagcagcattgaaaaagg 916 ||||||||| ||||| ||||| ||||||||||| ||||| ||||| ||||||||||||| Sbjct: 28900299 ggttgcacattcagcaggctcatctcttcgccgttataatgaagcggcattgaaaaagg 28900357 Score = 117 bits (59), Expect = 2e-22 Identities = 101/115 (87%) Strand = Plus / Plus Query: 1918 tgttcatgctgtttttcgtccctggcaggcaaagtgcccttccataggtacagctacaag 1977 ||||| ||||||||||| ||| ||| |||||||| || ||||| ||||||| |||||| Sbjct: 28902053 tgttcgtgctgtttttcttccttggtcggcaaagtaccattccacaggtacaattacaag 28902112 Query: 1978 tactgcagcactacgtgtatgcatctccattcagaaatgctggaagatgactgag 2032 ||||||||||| || ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 28902113 tactgcagcaccacatgtatgcatcttcattcagaaatgctggaagatgattgag 28902167 Score = 97.6 bits (49), Expect = 2e-16 Identities = 76/85 (89%) Strand = Plus / Plus Query: 44 cctcctcctccccccagatggcggcggccgcgccggagaagagacctccgcgctcgctct 103 ||||||||||| |||||||||||||||| ||||||||| || ||||| |||||||||| Sbjct: 28898245 cctcctcctcctaccagatggcggcggcctcgccggagagcaggcctcctcgctcgctct 28898304 Query: 104 tcgaccttcccccggacttcttcga 128 ||||||| ||| ||||||||||||| Sbjct: 28898305 tcgacctccccgcggacttcttcga 28898329 Score = 91.7 bits (46), Expect = 1e-14 Identities = 91/106 (85%) Strand = Plus / Plus Query: 233 cggaggcggcggggttccggtggacgtgtaacacctgtgccggcgaattcgattcgctgc 292 ||||||| ||||||| ||||||| || |||||||| ||| |||||||| ||||||| Sbjct: 28898431 cggaggctccggggttgaggtggacatgcaacacctgcgcctctgaattcgagtcgctgc 28898490 Query: 293 aggagcagcgcgagcacttcaaatccgatctccaccgcctcaacgt 338 |||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 28898491 aggaacagcgcgagcacttcaagtctgatctccatcgcctcaacgt 28898536 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1774 ctcgccgacgaaagagagaaacgagcagcggcagcggaaagaaga 1818 |||||||| |||||||||||| ||||||| ||||| ||||||||| Sbjct: 28901915 ctcgccgaggaaagagagaaaagagcagccgcagccgaaagaaga 28901959 Score = 50.1 bits (25), Expect = 0.034 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1681 caaatgggcaaaccaactgcttctgtgccaggcctgaaaca 1721 ||||||| ||| ||||||||||| |||||||||||||||| Sbjct: 28901715 caaatggccaatgcaactgcttctatgccaggcctgaaaca 28901755
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 295 bits (149), Expect = 3e-76 Identities = 227/253 (89%) Strand = Plus / Plus Query: 1291 tctaataatgcaactacacctctccatgaagctgcaaaggctggcaatgttgaacaaact 1350 |||||||||| ||| || ||||| || ||||| |||||| ||||||||| | | ||||| Sbjct: 113059 tctaataatgaaacaacgcctcttcacgaagcagcaaagtctggcaatgctcagcaaaca 113118 Query: 1351 ctggaattgctcgagcagggcttggatccttgtatcaaagatgagagaggaaagacacct 1410 ||||| ||||| |||||||| |||||||||||||| ||||||| |||||||| |||||| Sbjct: 113119 ctggagttgcttgagcagggtttggatccttgtattaaagatgcaagaggaaaaacacct 113178 Query: 1411 tacctgctggcttcagacaaagaagtcagaaatacattcagaagattcatggcgctcaac 1470 ||| |||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 113179 tacttgctggcttcggacaaagaagttagaaatacattcagaagatttatggcactcaac 113238 Query: 1471 cttgacaaatgggattggcatgctgctgatgtgcctagtgcattaacaaaggaaatggaa 1530 || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 113239 ctagacaaatgggattggcatgcggctgatgtgcctagtgcactaacaaaggaaatggaa 113298 Query: 1531 gaatcacaagctg 1543 ||||||||||||| Sbjct: 113299 gaatcacaagctg 113311 Score = 242 bits (122), Expect = 4e-60 Identities = 206/234 (88%) Strand = Plus / Plus Query: 914 aggaagttcaagaattaatagtttcttggaagccatactttgacgcctgtgtttgtgtct 973 ||||| ||||||||||||||| |||||||||| ||||||||||| ||||| ||||||| Sbjct: 112670 aggaaattcaagaattaatagcttcttggaagtcatactttgacctttgtgtctgtgtct 112729 Query: 974 atatatacgctccatcaaagaaccgccagatgctctttgatggggataaggctcaatctg 1033 ||| || ||||| ||||||||||| || ||||||||||||||||||||| |||| || | Sbjct: 112730 ttatgtatgctccgtcaaagaaccgtcaaatgctctttgatggggataagactcagtcgg 112789 Query: 1034 tattgcaagcatgtgatattcgtccactccctttgactgttcatcgacccaccttgaaag 1093 ||||||| || ||||||||||||||| |||| |||||||||||||| ||||||||||| | Sbjct: 112790 tattgcaggcttgtgatattcgtccaatcccattgactgttcatcggcccaccttgaagg 112849 Query: 1094 aagcaaaacgcgtatacaataacctaacacagctctattatgagacggaatgct 1147 |||||||||| |||| | ||||||||||||||||| |||||||| |||||||| Sbjct: 112850 aagcaaaacggttatatactaacctaacacagctctgttatgagatggaatgct 112903 Score = 238 bits (120), Expect = 7e-59 Identities = 352/432 (81%) Strand = Plus / Plus Query: 340 aagctgagtgttgctggtaaatctattatcaaggaagaagatttggaaaaaattgattct 399 |||||||| ||||||||||| |||||||||||||||| || || || ||| ||| | Sbjct: 111717 aagctgagcattgctggtaaaactattatcaaggaagatgacttagacaaagcagatccc 111776 Query: 400 gattctctgtttgacgatttggaggtatctagtgtatctggttctgaggacgaacgggaa 459 ||||||||||| || |||||||||||||||||||||||||| || ||||| |||| ||| Sbjct: 111777 gattctctgttcgatgatttggaggtatctagtgtatctggatcagaggatgaacttgaa 111836 Query: 460 gacgtacctgcatcagatcaccggctctcagttaaaggcaaggaagacttcaggaagaaa 519 | | ||||||||||||| | ||||||| |||| ||||| ||| |||||||||||| Sbjct: 111837 aatgggcctgcatcagatcgtggtctctcagccaaagacaagggagaattcaggaagaaa 111896 Query: 520 cnnnnnnnncatggtcattctggtgacactgtttctttttggagatgcgtactgttcaat 579 | | |||||||||||||||| |||||| | ||||||||| ||||||| || Sbjct: 111897 ctttattttcgctgtcattctggtgacacagtttctatctggagatgcatactgttgaaa 111956 Query: 580 gaacatgaagaaccattttttgactgcaaatctgggaaaatggaaagtcatggatctaca 639 ||||||||||| ||| |||| | |||| ||||| | | |||||||||||||||||| Sbjct: 111957 gaacatgaagagccagttttcaatagcaagtctggtcagacagaaagtcatggatctaca 112016 Query: 640 tcatatgtgcatgaagatgagatgataaatagagtgaagcagttggcatgtgaacctcgc 699 ||| ||| || || ||||| ||| |||||||||||||| | ||| ||| ||| ||||| Sbjct: 112017 ccatttgtacaagaggatgaaatgctaaatagagtgaagaatttgacatctgagcctcgt 112076 Query: 700 aatgcatcgcatttgaggatcattatattaacaagtggtggacattttgctggatgtgtt 759 ||||||| | ||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 112077 gatgcatcacgtttgaggatcattctactaacaagtggtggacattttgctggatgtgtt 112136 Query: 760 tttgacggaaac 771 ||||| |||||| Sbjct: 112137 tttgatggaaac 112148 Score = 172 bits (87), Expect = 3e-39 Identities = 111/119 (93%) Strand = Plus / Plus Query: 798 taggtatgttgtaagggcaaaggctggaaagaggcagtctggaaaagatgctactggaaa 857 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 112401 taggtatgttgtaagggcaaaggctggaaagaggcagtctgggaaagatgctactgggaa 112460 Query: 858 ggttgcacactcagcgggctcttctcttcgccgctataacgaagcagcattgaaaaagg 916 ||||||||| ||||| ||||| ||||||||||| ||||| ||||| ||||||||||||| Sbjct: 112461 ggttgcacattcagcaggctcatctcttcgccgttataatgaagcggcattgaaaaagg 112519 Score = 117 bits (59), Expect = 2e-22 Identities = 101/115 (87%) Strand = Plus / Plus Query: 1918 tgttcatgctgtttttcgtccctggcaggcaaagtgcccttccataggtacagctacaag 1977 ||||| ||||||||||| ||| ||| |||||||| || ||||| ||||||| |||||| Sbjct: 114215 tgttcgtgctgtttttcttccttggtcggcaaagtaccattccacaggtacaattacaag 114274 Query: 1978 tactgcagcactacgtgtatgcatctccattcagaaatgctggaagatgactgag 2032 ||||||||||| || ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 114275 tactgcagcaccacatgtatgcatcttcattcagaaatgctggaagatgattgag 114329 Score = 97.6 bits (49), Expect = 2e-16 Identities = 76/85 (89%) Strand = Plus / Plus Query: 44 cctcctcctccccccagatggcggcggccgcgccggagaagagacctccgcgctcgctct 103 ||||||||||| |||||||||||||||| ||||||||| || ||||| |||||||||| Sbjct: 110407 cctcctcctcctaccagatggcggcggcctcgccggagagcaggcctcctcgctcgctct 110466 Query: 104 tcgaccttcccccggacttcttcga 128 ||||||| ||| ||||||||||||| Sbjct: 110467 tcgacctccccgcggacttcttcga 110491 Score = 91.7 bits (46), Expect = 1e-14 Identities = 91/106 (85%) Strand = Plus / Plus Query: 233 cggaggcggcggggttccggtggacgtgtaacacctgtgccggcgaattcgattcgctgc 292 ||||||| ||||||| ||||||| || |||||||| ||| |||||||| ||||||| Sbjct: 110593 cggaggctccggggttgaggtggacatgcaacacctgcgcctctgaattcgagtcgctgc 110652 Query: 293 aggagcagcgcgagcacttcaaatccgatctccaccgcctcaacgt 338 |||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 110653 aggaacagcgcgagcacttcaagtctgatctccatcgcctcaacgt 110698 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1774 ctcgccgacgaaagagagaaacgagcagcggcagcggaaagaaga 1818 |||||||| |||||||||||| ||||||| ||||| ||||||||| Sbjct: 114077 ctcgccgaggaaagagagaaaagagcagccgcagccgaaagaaga 114121 Score = 50.1 bits (25), Expect = 0.034 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1681 caaatgggcaaaccaactgcttctgtgccaggcctgaaaca 1721 ||||||| ||| ||||||||||| |||||||||||||||| Sbjct: 113877 caaatggccaatgcaactgcttctatgccaggcctgaaaca 113917
>tpg|BK004881.1| TPA_exp: Oryza sativa (japonica cultivar-group) growth-regulating factor 12 (GRF12) gene, complete cds Length = 5220 Score = 97.6 bits (49), Expect = 2e-16 Identities = 76/85 (89%) Strand = Plus / Plus Query: 44 cctcctcctccccccagatggcggcggccgcgccggagaagagacctccgcgctcgctct 103 ||||||||||| |||||||||||||||| ||||||||| || ||||| |||||||||| Sbjct: 4086 cctcctcctcctaccagatggcggcggcctcgccggagagcaggcctcctcgctcgctct 4145 Query: 104 tcgaccttcccccggacttcttcga 128 ||||||| ||| ||||||||||||| Sbjct: 4146 tcgacctccccgcggacttcttcga 4170 Score = 91.7 bits (46), Expect = 1e-14 Identities = 91/106 (85%) Strand = Plus / Plus Query: 233 cggaggcggcggggttccggtggacgtgtaacacctgtgccggcgaattcgattcgctgc 292 ||||||| ||||||| ||||||| || |||||||| ||| |||||||| ||||||| Sbjct: 4272 cggaggctccggggttgaggtggacatgcaacacctgcgcctctgaattcgagtcgctgc 4331 Query: 293 aggagcagcgcgagcacttcaaatccgatctccaccgcctcaacgt 338 |||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 4332 aggaacagcgcgagcacttcaagtctgatctccatcgcctcaacgt 4377
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Plus Query: 230 cgccggaggcggcggggttccggtg 254 ||||||||||||||||||||||||| Sbjct: 26790814 cgccggaggcggcggggttccggtg 26790838 Score = 44.1 bits (22), Expect = 2.1 Identities = 40/46 (86%) Strand = Plus / Minus Query: 198 gccggcgccggcgccgttgcagcagcagcaaccgccggaggcggcg 243 |||| ||||| ||||| |||||||||||| | ||||||||||||| Sbjct: 17506052 gccgccgccgccgccgcagcagcagcagcagcagccggaggcggcg 17506007
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Minus Query: 230 cgccggaggcggcggggttccggtg 254 ||||||||||||||||||||||||| Sbjct: 8164 cgccggaggcggcggggttccggtg 8140
>emb|AL357935.14| Human DNA sequence from clone RP11-80H12 on chromosome 9 Contains the 5' end of the gene for a novel protein (FLJ20300), a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene and two CpG islands, complete sequence Length = 169047 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1853 caggggctgctgctgcggcggcgg 1876 |||||||||||||||||||||||| Sbjct: 83058 caggggctgctgctgcggcggcgg 83081
>gb|AC019144.9| Homo sapiens BAC clone RP11-733L22 from 2, complete sequence Length = 146004 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 768 aaacaaaatattagcaaacaaaac 791 |||||||||||||||||||||||| Sbjct: 51414 aaacaaaatattagcaaacaaaac 51437
>gb|AC158920.4| Mus musculus chromosome 5, clone RP24-238C7, complete sequence Length = 156671 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 742 cattttgctggatgtgtttttga 764 ||||||||||||||||||||||| Sbjct: 74209 cattttgctggatgtgtttttga 74187
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 712 ttgaggatcattatattaacaag 734 ||||||||||||||||||||||| Sbjct: 990980 ttgaggatcattatattaacaag 991002
>ref|XM_001020625.1| Tetrahymena thermophila SB210 ABC transporter family protein (TTHERM_00219530) mRNA, complete cds Length = 4653 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 360 atctattatcaaggaagaagat 381 |||||||||||||||||||||| Sbjct: 2781 atctattatcaaggaagaagat 2802
>gb|AC188701.3| Pan troglodytes BAC clone CH251-48C23 from chromosome 2, complete sequence Length = 168637 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 80471 aacaaaatattagcaaacaaaa 80492
>ref|XM_001216407.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_07786) mRNA, complete cds Length = 1305 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1857 ggctgctgctgcggcggcgggc 1878 |||||||||||||||||||||| Sbjct: 50 ggctgctgctgcggcggcgggc 29
>ref|NM_001045861.1| Danio rerio zgc:152714 (zgc:152714), mRNA gb|BC121738.1| Danio rerio zgc:152714, mRNA (cDNA clone MGC:152714 IMAGE:7435944), complete cds Length = 1102 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1386 caaagatgagagaggaaagaca 1407 |||||||||||||||||||||| Sbjct: 1034 caaagatgagagaggaaagaca 1055
>ref|XM_216340.4| PREDICTED: Rattus norvegicus AT rich interactive domain 1A (Swi1 like) (predicted) (Arid1a_predicted), mRNA Length = 8161 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1855 ggggctgctgctgcggcggcgg 1876 |||||||||||||||||||||| Sbjct: 1000 ggggctgctgctgcggcggcgg 1021
>ref|XM_001111218.1| PREDICTED: Macaca mulatta hypothetical protein LOC713875, transcript variant 5 (LOC713876), mRNA Length = 3636 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1852 tcaggggctgctgctgcggcgg 1873 |||||||||||||||||||||| Sbjct: 3057 tcaggggctgctgctgcggcgg 3036
>ref|XM_001111175.1| PREDICTED: Macaca mulatta hypothetical protein LOC713875, transcript variant 4 (LOC713876), mRNA Length = 3421 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1852 tcaggggctgctgctgcggcgg 1873 |||||||||||||||||||||| Sbjct: 2842 tcaggggctgctgctgcggcgg 2821
>ref|XM_001111138.1| PREDICTED: Macaca mulatta hypothetical protein LOC713875, transcript variant 3 (LOC713876), mRNA Length = 3812 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1852 tcaggggctgctgctgcggcgg 1873 |||||||||||||||||||||| Sbjct: 3223 tcaggggctgctgctgcggcgg 3202
>gb|BC116535.1| Danio rerio cDNA clone IMAGE:8129476, partial cds Length = 1102 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1386 caaagatgagagaggaaagaca 1407 |||||||||||||||||||||| Sbjct: 1035 caaagatgagagaggaaagaca 1056
>ref|XM_001004113.1| PREDICTED: Mus musculus F-box protein 11 (Fbxo11), mRNA Length = 4013 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1855 ggggctgctgctgcggcggcgg 1876 |||||||||||||||||||||| Sbjct: 217 ggggctgctgctgcggcggcgg 196
>ref|NM_100073.2| Arabidopsis thaliana unknown protein (AT1G01930) mRNA, complete cds Length = 1999 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 307 cacttcaaatccgatctccaccgcctcaacgttaagctgagtgttgctgg 356 |||||||| |||||| | || ||||| ||| | ||||||||||||||||| Sbjct: 319 cacttcaagtccgatattcatcgccttaacatcaagctgagtgttgctgg 368
>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence Length = 208557 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 772 aaaatattagcaaacaaaacat 793 |||||||||||||||||||||| Sbjct: 15605 aaaatattagcaaacaaaacat 15626
>gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome 19, complete sequence Length = 215151 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 772 aaaatattagcaaacaaaacat 793 |||||||||||||||||||||| Sbjct: 144220 aaaatattagcaaacaaaacat 144241
>gb|AC147147.2| Pan troglodytes BAC clone CH251-230I19 from Y, complete sequence Length = 143402 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 128714 aacaaaatattagcaaacaaaa 128693
>gb|AC145866.3| Pan troglodytes BAC clone RP43-21B7 from 7, complete sequence Length = 189814 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1252 gactcatcaatttcacttgaag 1273 |||||||||||||||||||||| Sbjct: 118491 gactcatcaatttcacttgaag 118470
>gb|AC124301.6| Homo sapiens chromosome 11, clone RP11-358H18, complete sequence Length = 145713 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 102170 aacaaaatattagcaaacaaaa 102149
>gb|AC109782.7| Homo sapiens 3 BAC RP11-346M10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163591 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1995 tatgcatctccattcagaaatg 2016 |||||||||||||||||||||| Sbjct: 36711 tatgcatctccattcagaaatg 36732
>gb|AC123900.2| Homo sapiens chromosome 3 clone RP11-640D6, complete sequence Length = 166485 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 53589 aacaaaatattagcaaacaaaa 53568
>gb|AC004844.1| Homo sapiens PAC clone RP4-613I23 from 7p11-p13, complete sequence Length = 141895 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1252 gactcatcaatttcacttgaag 1273 |||||||||||||||||||||| Sbjct: 91981 gactcatcaatttcacttgaag 91960
>gb|AC108714.3| Homo sapiens 3p BAC RP11-146G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151143 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1995 tatgcatctccattcagaaatg 2016 |||||||||||||||||||||| Sbjct: 139749 tatgcatctccattcagaaatg 139770
>gb|AC020642.7| Homo sapiens chromosome 10 clone RP11-275D14, complete sequence Length = 145697 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 129938 aacaaaatattagcaaacaaaa 129917
>gb|AC093882.2| Homo sapiens BAC clone RP11-658L13 from 4, complete sequence Length = 172346 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 162961 aacaaaatattagcaaacaaaa 162940
>gb|AC087174.4| Homo sapiens chromosome 11, clone RP11-640J11, complete sequence Length = 187218 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 773 aaatattagcaaacaaaacatt 794 |||||||||||||||||||||| Sbjct: 65066 aaatattagcaaacaaaacatt 65045
>emb|BX119964.4| Human DNA sequence from clone RP1-267M5 on chromosome X Contains a NADH dehydrogenase 1 (MTND1) pseudogene, a NADH dehydrogenase 2 (MTND2) pseudogene and a zinc finger protein (ZFP) pseudogene, complete sequence Length = 93048 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 31289 aacaaaatattagcaaacaaaa 31268
>emb|AL591719.8| Human DNA sequence from clone RP11-293A10 on chromosome 1 Contains the 3' end of a novel gene (FLJ10330), a novel gene (FLJ35838), the 5' end of the STXBP3 gene for syntaxin binding protein 3, a novel gene and a chromosome 20 open reading frame 147 (C20orf147) pseudogene, complete sequence Length = 96417 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 91596 aacaaaatattagcaaacaaaa 91575
>emb|AL451086.6| Human DNA sequence from clone RP11-265D20 on chromosome X, complete sequence Length = 111040 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 17344 aacaaaatattagcaaacaaaa 17323
>gb|BT006115.1| Arabidopsis thaliana clone U51042 unknown protein (At1g01930) mRNA, complete cds Length = 1774 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 307 cacttcaaatccgatctccaccgcctcaacgttaagctgagtgttgctgg 356 |||||||| |||||| | || ||||| ||| | ||||||||||||||||| Sbjct: 268 cacttcaagtccgatattcatcgccttaacatcaagctgagtgttgctgg 317
>gb|AY086375.1| Arabidopsis thaliana clone 24737 mRNA, complete sequence Length = 1920 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 307 cacttcaaatccgatctccaccgcctcaacgttaagctgagtgttgctgg 356 |||||||| |||||| | || ||||| ||| | ||||||||||||||||| Sbjct: 302 cacttcaagtccgatattcatcgccttaacatcaagctgagtgttgctgg 351
>gb|AC092646.2| Homo sapiens BAC clone RP11-415D20 from 2, complete sequence Length = 176982 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 170421 aacaaaatattagcaaacaaaa 170400
>gb|AC012158.32| Homo sapiens 12 BAC RP11-290I21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151655 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 97535 aacaaaatattagcaaacaaaa 97556
>dbj|BS000620.1| Pan troglodytes chromosome Y clone:PTB-548J12, complete sequences Length = 199682 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 23853 aacaaaatattagcaaacaaaa 23832
>dbj|AK118715.1| Arabidopsis thaliana At1g01930 mRNA for unknown protein, complete cds, clone: RAFL21-02-K03 Length = 1994 Score = 44.1 bits (22), Expect = 2.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 307 cacttcaaatccgatctccaccgcctcaacgttaagctgagtgttgctgg 356 |||||||| |||||| | || ||||| ||| | ||||||||||||||||| Sbjct: 319 cacttcaagtccgatattcatcgccttaacatcaagctgagtgttgctgg 368
>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129619 Score = 44.1 bits (22), Expect = 2.1 Identities = 40/46 (86%) Strand = Plus / Plus Query: 198 gccggcgccggcgccgttgcagcagcagcaaccgccggaggcggcg 243 |||| ||||| ||||| |||||||||||| | ||||||||||||| Sbjct: 26354 gccgccgccgccgccgcagcagcagcagcagcagccggaggcggcg 26399
>gb|AC154673.2| Mus musculus BAC clone RP24-298M20 from chromosome 17, complete sequence Length = 157621 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1855 ggggctgctgctgcggcggcgg 1876 |||||||||||||||||||||| Sbjct: 39606 ggggctgctgctgcggcggcgg 39585
>dbj|AP005230.2| Homo sapiens genomic DNA, chromosome 18p, clone:RP11-620B7, complete sequence Length = 176526 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 769 aacaaaatattagcaaacaaaa 790 |||||||||||||||||||||| Sbjct: 47743 aacaaaatattagcaaacaaaa 47764
>gb|AC192122.3| Pan troglodytes BAC clone CH251-676N7 from chromosome 8, complete sequence Length = 193225 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaa 789 ||||||||||||||||||||| Sbjct: 37496 aacaaaatattagcaaacaaa 37476
>emb|AM263198.1| Listeria welshimeri serovar 6b str. SLCC5334 complete genome Length = 2814130 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 373 gaagaagatttggaaaaaattgatt 397 |||||||||||| |||||||||||| Sbjct: 1426394 gaagaagatttgaaaaaaattgatt 1426418
>emb|CT829066.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128C12, full insert sequence Length = 1927 Score = 42.1 bits (21), Expect = 8.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 203 cgccggcgccgttgcagcagcagcaaccgccggaggcggcg 243 ||||| ||||| |||||||||||| | ||||||||||||| Sbjct: 193 cgccgccgccgcagcagcagcagcagcagccggaggcggcg 233
>dbj|AK241315.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065142A02, full insert sequence Length = 2133 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 cggcgccggcgccgttgcagcagcagcaa 228 |||||||||||||| ||||||||||||| Sbjct: 1781 cggcgccggcgccgccgcagcagcagcaa 1809
>ref|NM_001074358.1| Oryza sativa (japonica cultivar-group) Os11g0446000 (Os11g0446000) mRNA, complete cds Length = 1446 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 cggcgccggcgccgttgcagcagcagcaa 228 |||||||||||||| ||||||||||||| Sbjct: 1349 cggcgccggcgccgccgcagcagcagcaa 1377
>ref|NM_001071613.1| Oryza sativa (japonica cultivar-group) Os10g0519300 (Os10g0519300) mRNA, complete cds Length = 1635 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1855 ggggctgctgctgcggcggcg 1875 ||||||||||||||||||||| Sbjct: 1363 ggggctgctgctgcggcggcg 1343
>ref|NM_001066440.1| Oryza sativa (japonica cultivar-group) Os07g0543000 (Os07g0543000) mRNA, complete cds Length = 1116 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 264 gggctgctgctgcggcggcgg 244
>ref|NM_001048691.1| Oryza sativa (japonica cultivar-group) Os01g0173000 (Os01g0173000) mRNA, complete cds Length = 585 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 85 gctgctgctgcggcggcgggc 65
>ref|XM_001159387.1| PREDICTED: Pan troglodytes rap2 interacting protein x, transcript variant 1 (RUFY3), mRNA Length = 4643 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 904 gctgctgctgcggcggcgggc 884
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 7037070 ccggcgccgttgcagcagcag 7037090
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gcagcagcagcaaccgccgga 236 ||||||||||||||||||||| Sbjct: 4721532 gcagcagcagcaaccgccgga 4721512
>gb|AC190268.1| Callithrix jacchus chromosome UNK clone CH259-100H12, complete sequence Length = 208774 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 770 acaaaatattagcaaacaaaa 790 ||||||||||||||||||||| Sbjct: 63493 acaaaatattagcaaacaaaa 63473
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 5539047 gggctgctgctgcggcggcgg 5539027
>gb|CP000395.1| Borrelia afzelii PKo, complete genome Length = 905394 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 gaagaagatttggaaaaaatt 393 ||||||||||||||||||||| Sbjct: 414707 gaagaagatttggaaaaaatt 414687
>ref|XM_001122945.1| PREDICTED: Apis mellifera similar to enabled CG15112-PA, isoform A (LOC727235), mRNA Length = 2621 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 381 tttggaaaaaattgattctgattct 405 |||||| |||||||||||||||||| Sbjct: 2576 tttggataaaattgattctgattct 2600
>gb|CP000388.1| Pseudoalteromonas atlantica T6c, complete genome Length = 5187005 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1679 gccaaatgggcaaaccaactg 1699 ||||||||||||||||||||| Sbjct: 3085198 gccaaatgggcaaaccaactg 3085178
>dbj|AB110223.1| Oryza sativa (japonica cultivar-group) OsMYC1 mRNA for bHLH-HALZ myc like protein, complete cds Length = 1156 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 282 gggctgctgctgcggcggcgg 262
>ref|XM_001105219.1| PREDICTED: Macaca mulatta similar to rap2 interacting protein x isoform 2, transcript variant 1 (LOC706417), mRNA Length = 3533 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 904 gctgctgctgcggcggcgggc 884
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 tgcagcagcagcaaccgccgg 235 ||||||||||||||||||||| Sbjct: 408138 tgcagcagcagcaaccgccgg 408158
>ref|XM_360089.1| Magnaporthe grisea 70-15 hypothetical protein (MG05464.4) partial mRNA Length = 1218 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 ggcgccgttgcagcagcagca 227 ||||||||||||||||||||| Sbjct: 1082 ggcgccgttgcagcagcagca 1062
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1857 ggctgctgctgcggcggcggg 1877 ||||||||||||||||||||| Sbjct: 66135 ggctgctgctgcggcggcggg 66115
>gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057F07 map near 50283S, complete sequence Length = 139827 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 200 cggcgccggcgccgttgcagcagcagcaa 228 |||||||||||||| ||||||||||||| Sbjct: 34664 cggcgccggcgccgccgcagcagcagcaa 34636
>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence Length = 200891 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 829 aggcagtctggaaaagatgct 849 ||||||||||||||||||||| Sbjct: 88610 aggcagtctggaaaagatgct 88630
>gb|U50199.1| Caenorhabditis elegans cosmid T14F9, complete sequence Length = 36679 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 847 gctactggaaaggttgcacac 867 ||||||||||||||||||||| Sbjct: 1895 gctactggaaaggttgcacac 1915
>ref|XM_877434.1| PREDICTED: Bos taurus hypothetical protein LOC614464 (LOC614464), mRNA Length = 726 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 259 gctgctgctgcggcggcgggc 239
>ref|XM_538416.2| PREDICTED: Canis familiaris similar to cytoskeleton-associated protein 4 (LOC481295), mRNA Length = 2163 Score = 42.1 bits (21), Expect = 8.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 198 gccggcgccggcgccgttgcagcagcagcaaccgccg 234 |||| ||||||||||| |||||||||||| |||||| Sbjct: 105 gccgccgccggcgccgcagcagcagcagcagccgccg 141
>gb|AC125398.4| Mus musculus BAC clone RP24-217G23 from chromosome 18, complete sequence Length = 166948 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1181 atgtgacaaaatcagaacaaa 1201 ||||||||||||||||||||| Sbjct: 146833 atgtgacaaaatcagaacaaa 146853
>gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, complete sequence Length = 250866 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1022 aggctcaatctgtattgcaag 1042 ||||||||||||||||||||| Sbjct: 119200 aggctcaatctgtattgcaag 119180
>ref|NM_164735.1| Drosophila melanogaster CG11266-RG, transcript variant G (CG11266), mRNA Length = 2499 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 1949 ccggcgccgttgcagcagcag 1969
>ref|NM_164734.1| Drosophila melanogaster CG11266-RF, transcript variant F (CG11266), mRNA Length = 2552 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 2002 ccggcgccgttgcagcagcag 2022
>ref|NM_164733.1| Drosophila melanogaster CG11266-RD, transcript variant D (CG11266), mRNA Length = 2574 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 2024 ccggcgccgttgcagcagcag 2044
>ref|NM_164732.1| Drosophila melanogaster CG11266-RC, transcript variant C (CG11266), mRNA Length = 2625 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 2075 ccggcgccgttgcagcagcag 2095
>ref|NM_164731.1| Drosophila melanogaster CG11266-RE, transcript variant E (CG11266), mRNA Length = 2282 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 1732 ccggcgccgttgcagcagcag 1752
>ref|NM_164730.1| Drosophila melanogaster CG11266-RA, transcript variant A (CG11266), mRNA Length = 2143 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 1593 ccggcgccgttgcagcagcag 1613
>ref|NM_135251.2| Drosophila melanogaster CG11266-RB, transcript variant B (CG11266), mRNA Length = 2194 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 1644 ccggcgccgttgcagcagcag 1664
>dbj|AK000911.1| Homo sapiens cDNA FLJ10049 fis, clone HEMBA1001197, highly similar to Homo sapiens mRNA for KIAA0871 protein Length = 1534 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 65 gctgctgctgcggcggcgggc 45
>gb|AC112001.6| Rattus norvegicus 2 BAC CH230-54E3 (Children's Hospital Oakland Research Institute) complete sequence Length = 225052 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1426 gacaaagaagtcagaaataca 1446 ||||||||||||||||||||| Sbjct: 7443 gacaaagaagtcagaaataca 7423
>gb|AC024649.10| Homo sapiens chromosome 8, clone RP11-618N15, complete sequence Length = 148282 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaa 789 ||||||||||||||||||||| Sbjct: 41790 aacaaaatattagcaaacaaa 41770
>gb|AC119151.1| Homo sapiens chromosome 5 clone CTD-2582L22, complete sequence Length = 176204 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 769 aacaaaatattagcaaacaaa 789 ||||||||||||||||||||| Sbjct: 75386 aacaaaatattagcaaacaaa 75406
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1855 ggggctgctgctgcggcggcg 1875 ||||||||||||||||||||| Sbjct: 20349 ggggctgctgctgcggcggcg 20369
>gb|AC078986.20| Homo sapiens 3q BAC RP11-138N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166518 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 769 aacaaaatattagcaaacaaa 789 ||||||||||||||||||||| Sbjct: 119214 aacaaaatattagcaaacaaa 119234
>gb|AC106794.3| Homo sapiens chromosome 5 clone RP11-419C19, complete sequence Length = 200581 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 769 aacaaaatattagcaaacaaa 789 ||||||||||||||||||||| Sbjct: 151008 aacaaaatattagcaaacaaa 151028
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 cggcgccggcgccgttgcagcagcagcaa 228 |||||||||||||| ||||||||||||| Sbjct: 14211630 cggcgccggcgccgccgcagcagcagcaa 14211658
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1855 ggggctgctgctgcggcggcg 1875 ||||||||||||||||||||| Sbjct: 19563158 ggggctgctgctgcggcggcg 19563178
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 21416015 gggctgctgctgcggcggcgg 21416035
>gb|AC104071.3| Homo sapiens BAC clone RP11-315A17 from 4, complete sequence Length = 184001 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1464 gctcaaccttgacaaatggga 1484 ||||||||||||||||||||| Sbjct: 132798 gctcaaccttgacaaatggga 132818
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 3740928 gctgctgctgcggcggcgggc 3740948
>emb|AL953874.2| Human DNA sequence from clone CTD-2267G17 on chromosome X Contains the GAGED3 gene for family D G antigen 3, a GAGE family pseudogene and the 5' end of a pseudogene similar to part of family D G antigen 2 (GAGED2), complete sequence Length = 94514 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaa 789 ||||||||||||||||||||| Sbjct: 23109 aacaaaatattagcaaacaaa 23089
>ref|XM_679711.1| PREDICTED: Danio rerio similar to T54 protein-like (LOC556809), mRNA Length = 2013 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1386 caaagatgagagaggaaagac 1406 ||||||||||||||||||||| Sbjct: 1038 caaagatgagagaggaaagac 1058
>emb|AL135784.4| Human DNA sequence from clone RP4-687J17 on chromosome Xq26.1-26.3 Contains the 5' end of the IGSF1 gene for immunoglobulin superfamily member 1 and an olfactory receptor family pseudogene, complete sequence Length = 92697 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 caaggaagacttcaggaagaa 518 ||||||||||||||||||||| Sbjct: 92496 caaggaagacttcaggaagaa 92516
>emb|AL034376.10|HS529N6 Human DNA sequence from clone RP4-529N6 on chromosome 6p24.1-25.3 Contains a novel gene, complete sequence Length = 131819 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 tgctgtttttcgtccctggca 1944 ||||||||||||||||||||| Sbjct: 122351 tgctgtttttcgtccctggca 122331
>dbj|AB110196.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 23C4AG047 Length = 1040 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 188 gggctgctgctgcggcggcgg 168
>gb|AC020734.6| Homo sapiens BAC clone RP11-665I14 from 4, complete sequence Length = 196550 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1464 gctcaaccttgacaaatggga 1484 ||||||||||||||||||||| Sbjct: 158452 gctcaaccttgacaaatggga 158432
>gb|AC008326.9| Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR39J17, complete sequence Length = 148780 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 87230 ccggcgccgttgcagcagcag 87250
>emb|BX901968.13| Zebrafish DNA sequence from clone DKEYP-59C12 in linkage group 18, complete sequence Length = 126945 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 961 tgtgtttgtgtctatatatac 981 ||||||||||||||||||||| Sbjct: 26463 tgtgtttgtgtctatatatac 26483
>emb|AL591213.4| Zebrafish DNA sequence from clone BUSM1-150F13, complete sequence Length = 113551 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1386 caaagatgagagaggaaagac 1406 ||||||||||||||||||||| Sbjct: 59275 caaagatgagagaggaaagac 59255
>gb|AY051860.1| Drosophila melanogaster LD35730 full length cDNA Length = 2433 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 1619 ccggcgccgttgcagcagcag 1639
>emb|X79146.1|SLLINC S.lincolnensis (78-11) Lincomycin production genes Length = 36270 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1864 gctgcggcggcgggcagctcc 1884 ||||||||||||||||||||| Sbjct: 27272 gctgcggcggcgggcagctcc 27292
>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12 Length = 240050 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 373 gaagaagatttggaaaaaattgatt 397 |||||||||||| |||||||||||| Sbjct: 35384 gaagaagatttgaaaaaaattgatt 35408
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR13J07, complete sequence Length = 174287 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ccggcgccgttgcagcagcag 225 ||||||||||||||||||||| Sbjct: 143932 ccggcgccgttgcagcagcag 143952
>gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, region 44F-45A, BAC clone BACR02C23, complete sequence Length = 168601 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gcagcagcagcaaccgccgga 236 ||||||||||||||||||||| Sbjct: 27090 gcagcagcagcaaccgccgga 27070
>ref|NM_001007207.1| Danio rerio T54 protein-like (t54l), mRNA Length = 2023 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1386 caaagatgagagaggaaagac 1406 ||||||||||||||||||||| Sbjct: 1042 caaagatgagagaggaaagac 1062
>gb|AC009570.13|AC009570 Homo sapiens chromosome 4, clone RP11-46J23, complete sequence Length = 180596 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 102675 gctgctgctgcggcggcgggc 102695
>gb|AC007717.8|AC007717 Homo sapiens chromosome 18, clone RP11-315O17, complete sequence Length = 168787 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 961 tgtgtttgtgtctatatatac 981 ||||||||||||||||||||| Sbjct: 146801 tgtgtttgtgtctatatatac 146821
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 14470 gctgctgctgcggcggcgggc 14490
>gb|AC091713.4| Papio anubis clone RP41-217F22, complete sequence Length = 215961 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1181 atgtgacaaaatcagaacaaa 1201 ||||||||||||||||||||| Sbjct: 108288 atgtgacaaaatcagaacaaa 108268
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 60071 gggctgctgctgcggcggcgg 60091
>dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9 Length = 77298 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 tgcaaatctgggaaaatggaa 624 ||||||||||||||||||||| Sbjct: 45631 tgcaaatctgggaaaatggaa 45611
>emb|BX323090.7| Zebrafish DNA sequence from clone CH211-274B7 in linkage group 1, complete sequence Length = 166353 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 743 attttgctggatgtgtttttg 763 ||||||||||||||||||||| Sbjct: 43792 attttgctggatgtgtttttg 43812
>gb|AC131904.4| Homo sapiens chromosome 8, clone CTD-2328O16, complete sequence Length = 116803 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 769 aacaaaatattagcaaacaaa 789 ||||||||||||||||||||| Sbjct: 102888 aacaaaatattagcaaacaaa 102868
>emb|CR386136.1| Gallus gallus finished cDNA, clone ChEST360g22 Length = 953 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 atggcctcctcctccccccag 60 ||||||||||||||||||||| Sbjct: 712 atggcctcctcctccccccag 692
>dbj|AK068361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146F13, full insert sequence Length = 2597 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 265 gggctgctgctgcggcggcgg 245
>dbj|AK058889.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D03, full insert sequence Length = 1116 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 264 gggctgctgctgcggcggcgg 244
>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete sequence Length = 169530 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 743 attttgctggatgtgtttttg 763 ||||||||||||||||||||| Sbjct: 39600 attttgctggatgtgtttttg 39580
>gb|AF112221.1|AF112221 Homo sapiens rap2 interacting protein x mRNA, complete cds Length = 1528 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 42 gctgctgctgcggcggcgggc 22
>gb|AC009731.6|AC009731 Homo sapiens 12 BAC RP11-438N16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172749 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1937 ccctggcaggcaaagtgccct 1957 ||||||||||||||||||||| Sbjct: 15087 ccctggcaggcaaagtgccct 15067
>gb|AC174384.2| Gallus gallus BAC clone CH261-128H23 from chromosome ul, complete sequence Length = 206900 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 atggcctcctcctccccccag 60 ||||||||||||||||||||| Sbjct: 4182 atggcctcctcctccccccag 4162
>emb|AL358292.4|CNS05TDZ Human chromosome 14 DNA sequence BAC R-736P16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180211 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 961 tgtgtttgtgtctatatatac 981 ||||||||||||||||||||| Sbjct: 65230 tgtgtttgtgtctatatatac 65250
>ref|XM_817121.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0100) partial mRNA Length = 5883 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1857 ggctgctgctgcggcggcggg 1877 ||||||||||||||||||||| Sbjct: 5649 ggctgctgctgcggcggcggg 5669
>gb|BC030809.1| Homo sapiens, mRNA (cDNA clone IMAGE:4713722) Length = 1246 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1858 gctgctgctgcggcggcgggc 1878 ||||||||||||||||||||| Sbjct: 69 gctgctgctgcggcggcgggc 89
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 373 gaagaagatttggaaaaaattgatt 397 |||||||||||| |||||||||||| Sbjct: 1425087 gaagaagatttgaaaaaaattgatt 1425111
>emb|AL929263.4| Zebrafish DNA sequence from clone CH211-242M24 in linkage group 8, complete sequence Length = 150413 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1386 caaagatgagagaggaaagac 1406 ||||||||||||||||||||| Sbjct: 101212 caaagatgagagaggaaagac 101192
>emb|AL645666.10| Mouse DNA sequence from clone RP23-356E21 on chromosome 4, complete sequence Length = 155103 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 catggcctcctcctcccccca 59 ||||||||||||||||||||| Sbjct: 55445 catggcctcctcctcccccca 55425
>dbj|D14486.1|HSE4 Equine herpesvirus 4 (EHV4) genome, thymidine kinase (TK) and glycoprotein H (gH) genes Length = 5880 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 5209 gggctgctgctgcggcggcgg 5229 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1856 gggctgctgctgcggcggcgg 1876 ||||||||||||||||||||| Sbjct: 5233 gggctgctgctgcggcggcgg 5253
>gb|AY144348.1| Magnaporthe grisea endo-beta-1,4-D-xylanase (XYL5) gene, complete cds Length = 3259 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 ggcgccgttgcagcagcagca 227 ||||||||||||||||||||| Sbjct: 2034 ggcgccgttgcagcagcagca 2014 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 397,801,995 Number of extensions: 23163132 Number of successful extensions: 151846 Number of sequences better than 10.0: 131 Number of HSP's gapped: 151838 Number of HSP's successfully gapped: 170 Length of query: 2141 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2118 Effective length of database: 18,503,978,556 Effective search space: 39191426581608 Effective search space used: 39191426581608 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
