Clone Name | FLbaf97i10 |
---|---|
Clone Library Name | barley_pub |
>O75157:T22D2_HUMAN TSC22 domain family protein 2 - Homo sapiens (Human)| Length = 780 Score = 33.5 bits (75), Expect = 2.9 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Frame = +2 Query: 662 QPRQEPTGWS---STMPMPPFTPVPCSPQPHRFLTIPDQPQGS 781 QP P G + S+ P+PPF PQP P QPQG+ Sbjct: 275 QPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQGA 317
>Q5QZP7:CCMA_IDILO Cytochrome c biogenesis ATP-binding export protein ccmA -| Idiomarina loihiensis Length = 218 Score = 33.1 bits (74), Expect = 3.8 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Frame = -2 Query: 371 VEVWKLLPFLGGLEALKDEAVRQI---RKTREALRRPVGSEAALEWIDGERGLLDVQGIA 201 V+ W LL LG L L+DE ++ ++ R AL R ++A+L +D LDVQGIA Sbjct: 117 VDAWDLLEKLG-LLGLEDELTTRLSAGQQRRVALTRLWATQASLWILDEPFTALDVQGIA 175 Query: 200 L 198 L Sbjct: 176 L 176
>Q2NKJ3:CQ068_HUMAN Uncharacterized protein C17orf68 - Homo sapiens (Human)| Length = 1217 Score = 32.7 bits (73), Expect = 4.9 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 8/86 (9%) Frame = +3 Query: 669 VKNRRDGALPCPCRPSPRCHARLSPTASSPSLISLKAARQ---WCSPHTVAFLLCASSHK 839 V+N + L P + + RL +S P+L +LK Q W S A L + Sbjct: 521 VRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASY 580 Query: 840 MPSAC--SREPWSWLCAIQS---PAQ 902 +PS R WSWLC + S PAQ Sbjct: 581 LPSCQLNRRLAWSWLCLLPSAFCPAQ 606
>Q7TV80:UVRB_PROMM UvrABC system protein B - Prochlorococcus marinus (strain MIT 9313)| Length = 679 Score = 32.0 bits (71), Expect = 8.4 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Frame = -3 Query: 673 LTGLLHGEESEQGGLEDHAFR-PAAAEERPVGYEEAPSPARH----GAAE*GCDLRHADQ 509 L + +G+++ + L +H FR P+AA+ RP+ EE S AR A +L+ +D Sbjct: 345 LKAMYNGDQARKKVLIEHGFRLPSAADNRPLKSEEFWSKARQTVFVSATPGDWELKQSDG 404 Query: 508 DLHDHVFR 485 L + V R Sbjct: 405 HLAEQVIR 412
>Q5RDX3:CQ068_PONPY Uncharacterized protein C17orf68 homolog - Pongo pygmaeus| (Orangutan) Length = 1217 Score = 32.0 bits (71), Expect = 8.4 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Frame = +3 Query: 669 VKNRRDGALPCPCRPSPRCHARLSPTASSPSLISLKAARQ---WCSPHTVAFLLCASSHK 839 V+N + L P + + RL +S P+L +LK Q W S A L + Sbjct: 521 VRNAHNEILEEPHHCPLQKYTRLQTPSSFPTLAALKEEGQREAWASFDPEALLPLPEASH 580 Query: 840 MPSACSRE--PWSWLCAIQS---PAQ 902 +PS WSWLC + S PAQ Sbjct: 581 LPSCQLNRHLAWSWLCLLPSAFHPAQ 606 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 307,425,886 Number of extensions: 7000152 Number of successful extensions: 20845 Number of sequences better than 10.0: 5 Number of HSP's gapped: 20764 Number of HSP's successfully gapped: 5 Length of query: 582 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 463 Effective length of database: 68,045,334 Effective search space: 31504989642 Effective search space used: 31504989642 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)