Clone Name | FLbaf97i10 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001067761.1| Oryza sativa (japonica cultivar-group) Os08g0203800 (Os08g0203800) mRNA, complete cds Length = 1746 Score = 56.0 bits (28), Expect = 4e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 534 ccctattccgctgcgccgtgacgtgcaggcgatggcgcctcctcatagccgaccggtctt 593 |||| ||||||||||||| |||||| ||| |||| || |||||| ||||||| | | | Sbjct: 173 ccctcttccgctgcgccgcagcgtgcaagcggtggctccgcctcatcgccgaccaggcct 232 Query: 594 tcctccgccgccgctggccg 613 | |||||||||||||||||| Sbjct: 233 tactccgccgccgctggccg 252
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 56.0 bits (28), Expect = 4e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 534 ccctattccgctgcgccgtgacgtgcaggcgatggcgcctcctcatagccgaccggtctt 593 |||| ||||||||||||| |||||| ||| |||| || |||||| ||||||| | | | Sbjct: 6049657 ccctcttccgctgcgccgcagcgtgcaagcggtggctccgcctcatcgccgaccaggcct 6049716 Query: 594 tcctccgccgccgctggccg 613 | |||||||||||||||||| Sbjct: 6049717 tactccgccgccgctggccg 6049736
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 56.0 bits (28), Expect = 4e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 534 ccctattccgctgcgccgtgacgtgcaggcgatggcgcctcctcatagccgaccggtctt 593 |||| ||||||||||||| |||||| ||| |||| || |||||| ||||||| | | | Sbjct: 100469 ccctcttccgctgcgccgcagcgtgcaagcggtggctccgcctcatcgccgaccaggcct 100528 Query: 594 tcctccgccgccgctggccg 613 | |||||||||||||||||| Sbjct: 100529 tactccgccgccgctggccg 100548
>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0486F07 Length = 154926 Score = 56.0 bits (28), Expect = 4e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 534 ccctattccgctgcgccgtgacgtgcaggcgatggcgcctcctcatagccgaccggtctt 593 |||| ||||||||||||| |||||| ||| |||| || |||||| ||||||| | | | Sbjct: 5674 ccctcttccgctgcgccgcagcgtgcaagcggtggctccgcctcatcgccgaccaggcct 5733 Query: 594 tcctccgccgccgctggccg 613 | |||||||||||||||||| Sbjct: 5734 tactccgccgccgctggccg 5753
>dbj|AK106289.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B01, full insert sequence Length = 1768 Score = 56.0 bits (28), Expect = 4e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 534 ccctattccgctgcgccgtgacgtgcaggcgatggcgcctcctcatagccgaccggtctt 593 |||| ||||||||||||| |||||| ||| |||| || |||||| ||||||| | | | Sbjct: 173 ccctcttccgctgcgccgcagcgtgcaagcggtggctccgcctcatcgccgaccaggcct 232 Query: 594 tcctccgccgccgctggccg 613 | |||||||||||||||||| Sbjct: 233 tactccgccgccgctggccg 252
>ref|XM_960976.1| Plasmodium falciparum 3D7 hypothetical protein (PFF0390w) partial mRNA Length = 2592 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1696 agatatgtcaaaaaattatttctctttat 1724 ||||||||||||||| ||||||||||||| Sbjct: 2112 agatatgtcaaaaaaatatttctctttat 2084
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1696 agatatgtcaaaaaattatttctctttat 1724 ||||||||||||||| ||||||||||||| Sbjct: 334450 agatatgtcaaaaaaatatttctctttat 334422
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 13 cgccgcaccccaccccaccccac 35 ||||||||||||||||||||||| Sbjct: 360334 cgccgcaccccaccccaccccac 360356
>gb|AC164557.3| Mus musculus BAC clone RP23-282G1 from chromosome 8, complete sequence Length = 175078 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 771 ctcaaggcagccaggcagtggtg 793 ||||||||||||||||||||||| Sbjct: 89724 ctcaaggcagccaggcagtggtg 89746
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Plus Query: 65 gccgccgccactcctccccgtcgtcgt 91 ||||||||||||||||| ||||||||| Sbjct: 11808181 gccgccgccactcctcctcgtcgtcgt 11808207 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 26099704 ccgcaccccaccccaccccac 26099724
>gb|AC069261.37| Homo sapiens 12 BAC RP11-30G17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 11218 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 gccgcaccccaccccaccccact 36 ||||||||||||||||||||||| Sbjct: 4727 gccgcaccccaccccaccccact 4749
>dbj|AP005805.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0006M19 Length = 144073 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Plus Query: 65 gccgccgccactcctccccgtcgtcgt 91 ||||||||||||||||| ||||||||| Sbjct: 76116 gccgccgccactcctcctcgtcgtcgt 76142
>gb|AC145556.4| Mus musculus BAC clone RP23-308E7 from chromosome 8, complete sequence Length = 178400 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 771 ctcaaggcagccaggcagtggtg 793 ||||||||||||||||||||||| Sbjct: 19537 ctcaaggcagccaggcagtggtg 19559
>emb|CR855088.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0104J13, complete sequence Length = 82577 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 cgccgccgcaccccaccccaccccac 35 ||||||| |||||||||||||||||| Sbjct: 64995 cgccgccccaccccaccccaccccac 65020
>ref|XM_987699.1| PREDICTED: Mus musculus transient receptor potential cation channel, subfamily M, member 6 (Trpm6), mRNA Length = 5982 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 742 ccaccgcttcctcaccatccct 763 |||||||||||||||||||||| Sbjct: 1383 ccaccgcttcctcaccatccct 1404
>gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic sequence, complete sequence Length = 73070 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 54 cacccgctgctgccgccgccactcctcccc 83 ||||||||||||||||||| ||||||||| Sbjct: 917 cacccgctgctgccgccgctgctcctcccc 888
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 54 cacccgctgctgccgccgccactcctcccc 83 ||||||||||||||||||| ||||||||| Sbjct: 6774 cacccgctgctgccgccgctgctcctcccc 6803
>gb|AC122228.4| Mus musculus BAC clone RP23-131N12 from chromosome 12, complete sequence Length = 202970 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 caccccaccccaccccactagc 39 |||||||||||||||||||||| Sbjct: 146788 caccccaccccaccccactagc 146809
>gb|AC140458.3| Mus musculus BAC clone RP23-19C24 from chromosome 19, complete sequence Length = 186016 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 742 ccaccgcttcctcaccatccct 763 |||||||||||||||||||||| Sbjct: 51030 ccaccgcttcctcaccatccct 51051
>gb|AC121940.3| Mus musculus BAC clone RP24-209B21 from chromosome 19, complete sequence Length = 203390 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 742 ccaccgcttcctcaccatccct 763 |||||||||||||||||||||| Sbjct: 37791 ccaccgcttcctcaccatccct 37770
>ref|NM_153417.1| Mus musculus transient receptor potential cation channel, subfamily M, member 6 (Trpm6), mRNA gb|AY135644.1| Mus musculus transient receptor potential cation channel 6/channel-kinase 2 mRNA, complete cds Length = 6520 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 742 ccaccgcttcctcaccatccct 763 |||||||||||||||||||||| Sbjct: 1419 ccaccgcttcctcaccatccct 1440
>dbj|AK080899.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430202L17 product:similar to CHANNEL-KINASE 2 [Homo sapiens], full insert sequence Length = 3551 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 742 ccaccgcttcctcaccatccct 763 |||||||||||||||||||||| Sbjct: 1418 ccaccgcttcctcaccatccct 1439
>gb|AC099731.5| Homo sapiens BAC clone RP11-1244M4 from 7, complete sequence Length = 216250 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 736 tcagccccaccgcttcctcacc 757 |||||||||||||||||||||| Sbjct: 75220 tcagccccaccgcttcctcacc 75241
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 cgccgccgcaccccaccccaccccac 35 ||||||| |||||||||||||||||| Sbjct: 17182146 cgccgccccaccccaccccaccccac 17182171
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 54 cacccgctgctgccgccgccactcctcccc 83 ||||||||||||||||||| ||||||||| Sbjct: 22404556 cacccgctgctgccgccgctgctcctcccc 22404585 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgccgccactcctccccgtcg 87 ||||||||||||||||||||| Sbjct: 8315327 cgccgccactcctccccgtcg 8315307 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1383 aaggtgacaacaagagtttag 1403 ||||||||||||||||||||| Sbjct: 9292364 aaggtgacaacaagagtttag 9292344
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 239 cgatccactccagcgccgcctc 260 |||||||||||||||||||||| Sbjct: 2228103 cgatccactccagcgccgcctc 2228082
>gb|AC144411.2| Homo sapiens BAC clone GS1-146C24 from 7, complete sequence Length = 178059 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 736 tcagccccaccgcttcctcacc 757 |||||||||||||||||||||| Sbjct: 130396 tcagccccaccgcttcctcacc 130417
>dbj|AK111477.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-A02, full insert sequence Length = 1075 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 598 ccgccgccgctggccggaaggc 619 |||||||||||||||||||||| Sbjct: 753 ccgccgccgctggccggaaggc 774
>dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C06, full insert sequence Length = 1372 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 598 ccgccgccgctggccggaaggc 619 |||||||||||||||||||||| Sbjct: 649 ccgccgccgctggccggaaggc 628
>gb|AC102462.19| Mus musculus chromosome 1, clone RP24-327F2, complete sequence Length = 141794 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 cgccgccgcaccccaccccaccccac 35 ||||||||||||| |||||||||||| Sbjct: 109305 cgccgccgcaccctaccccaccccac 109330
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 cgccgccgcaccccaccccaccccac 35 ||||||| |||||||||||||||||| Sbjct: 126443 cgccgccccaccccaccccaccccac 126468
>ref|NM_172790.2| Mus musculus ankyrin repeat domain 52 (Ankrd52), mRNA Length = 6615 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 5734 ccgcaccccaccccaccccac 5754
>ref|NM_001064745.1| Oryza sativa (japonica cultivar-group) Os06g0647900 (Os06g0647900) mRNA, complete cds Length = 1291 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 455 ccgcaccccaccccaccccac 435
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 tccgccgccgctggccggaag 617 ||||||||||||||||||||| Sbjct: 1781595 tccgccgccgctggccggaag 1781575
>ref|XM_001106923.1| PREDICTED: Macaca mulatta similar to p30 DBC protein (LOC716288), mRNA Length = 3682 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ccacacccgctgctgccgccgccac 75 ||||| ||||||||||||||||||| Sbjct: 136 ccacagccgctgctgccgccgccac 112
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 236 cgtcgatccactccagcgccgcctc 260 ||||||||| ||||||||||||||| Sbjct: 1674256 cgtcgatccgctccagcgccgcctc 1674280
>emb|BX957273.10| Zebrafish DNA sequence from clone CH211-210P17 in linkage group 9, complete sequence Length = 150430 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1283 ttcaagttttacagtgcattg 1303 ||||||||||||||||||||| Sbjct: 43559 ttcaagttttacagtgcattg 43579
>emb|CT573422.5| Mouse DNA sequence from clone RP24-76M8 on chromosome 9, complete sequence Length = 193236 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 29674 ccgcaccccaccccaccccac 29694
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 tccgccgccgctggccggaag 617 ||||||||||||||||||||| Sbjct: 1982331 tccgccgccgctggccggaag 1982311
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 85354 ccgcaccccaccccaccccac 85374
>gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, complete sequence Length = 174746 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1705 aaaaaattatttctctttatgggga 1729 |||||||||||||| |||||||||| Sbjct: 112335 aaaaaattatttctttttatgggga 112359
>gb|AC091470.16| Mus musculus chromosome 3, clone RP23-237K2, complete sequence Length = 141824 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 1526 ccgcaccccaccccaccccac 1506
>ref|NM_199205.1| Homo sapiens KIAA1967 (KIAA1967), transcript variant 2, mRNA Length = 3749 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ccacacccgctgctgccgccgccac 75 ||||| ||||||||||||||||||| Sbjct: 51 ccacagccgctgctgccgccgccac 27
>gb|AC122159.30| Mus musculus strain 129/Sv clone ct7-575j15 map 10, complete sequence Length = 183491 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 183131 ccgcaccccaccccaccccac 183111
>gb|AC116811.15| Mus musculus chromosome 6, clone RP24-356D15, complete sequence Length = 150909 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 caccccaccccaccccactag 38 ||||||||||||||||||||| Sbjct: 112751 caccccaccccaccccactag 112771
>gb|AC120791.13| Mus musculus chromosome 7, clone RP23-56I4, complete sequence Length = 246249 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 242126 ccgcaccccaccccaccccac 242106
>gb|AE009048.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 74 of 256 of the complete sequence Length = 10288 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 654 ccgtgcaacagccccgtcaag 674 ||||||||||||||||||||| Sbjct: 5940 ccgtgcaacagccccgtcaag 5920
>gb|AC117937.4| Canis familiaris clone RP81-182F3, complete sequence Length = 152861 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 67831 ccgcaccccaccccaccccac 67851
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence Length = 200595 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1238 cagatggctttaacaaagctc 1258 ||||||||||||||||||||| Sbjct: 90289 cagatggctttaacaaagctc 90269
>gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome 7, complete sequence Length = 173971 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 54220 ccgcaccccaccccaccccac 54200
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 654 ccgtgcaacagccccgtcaag 674 ||||||||||||||||||||| Sbjct: 812857 ccgtgcaacagccccgtcaag 812837
>gb|AC067746.7| Homo sapiens chromosome 10 clone RP11-408L20, complete sequence Length = 189545 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 93538 ccgcaccccaccccaccccac 93558
>gb|BC031867.1| Homo sapiens cDNA clone IMAGE:4825132 Length = 1858 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 ccacacccgctgctgccgccgccac 75 ||||| ||||||||||||||||||| Sbjct: 184 ccacagccgctgctgccgccgccac 208
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 accggccggcgcagggcctcc 288 ||||||||||||||||||||| Sbjct: 3517496 accggccggcgcagggcctcc 3517476
>dbj|AK090124.1| Mus musculus brain CRL-1443 BC3H1 cDNA, RIKEN full-length enriched library, clone:G431002C21 product:hypothetical Ankyrin-repeat containing protein, full insert sequence Length = 6616 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 5734 ccgcaccccaccccaccccac 5754
>gb|AC104640.3| Homo sapiens 3 BAC RP11-809F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181345 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1689 tgaggggagatatgtcaaaaaattatttc 1717 |||||| |||| ||||||||||||||||| Sbjct: 44556 tgagggtagatttgtcaaaaaattatttc 44528
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 64 tgccgccgccactcctccccgtcgtcgtc 92 ||||||||||||||||| |||||||||| Sbjct: 79263 tgccgccgccactcctcgtcgtcgtcgtc 79291
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 64 tgccgccgccactcctccccgtcgtcgtc 92 ||||||||||||||||| |||||||||| Sbjct: 83399 tgccgccgccactcctcgtcgtcgtcgtc 83427
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 tccgctgcgccgtgacgtgcaggcg 564 |||||||||||| |||||||||||| Sbjct: 31502093 tccgctgcgccgcgacgtgcaggcg 31502117
>gb|AC106767.2| Homo sapiens chromosome 5 clone RP11-269M17, complete sequence Length = 143792 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ccgccgcaccccaccccaccc 32 ||||||||||||||||||||| Sbjct: 70426 ccgccgcaccccaccccaccc 70446
>gb|AC090489.8| Genomic sequence for Mus musculus, clone RP23-104O10, complete sequence Length = 207424 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 142850 ccgcaccccaccccaccccac 142870
>gb|AF268605.1|AF268605 Agrobacterium tumefaciens tRNA-Pro gene, complete sequence Length = 345 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 654 ccgtgcaacagccccgtcaag 674 ||||||||||||||||||||| Sbjct: 32 ccgtgcaacagccccgtcaag 12
>emb|BX069485.1|CNS09PS1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC6AF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 737 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 589 gtctttcctccgccgccgctg 609 ||||||||||||||||||||| Sbjct: 56 gtctttcctccgccgccgctg 76
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 tccgctgcgccgtgacgtgcaggcg 564 |||||||||||| |||||||||||| Sbjct: 15116 tccgctgcgccgcgacgtgcaggcg 15140
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 540 tccgctgcgccgtgacgtgcaggcg 564 |||||||||||| |||||||||||| Sbjct: 96157 tccgctgcgccgcgacgtgcaggcg 96181
>emb|CR859680.1| Pongo pygmaeus mRNA; cDNA DKFZp469H1413 (from clone DKFZp469H1413) Length = 3698 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ccacacccgctgctgccgccgccac 75 ||||| ||||||||||||||||||| Sbjct: 52 ccacagccgctgctgccgccgccac 28
>gb|AC026422.5| Homo sapiens chromosome 5 clone CTD-2169H9, complete sequence Length = 67542 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ccgccgcaccccaccccaccc 32 ||||||||||||||||||||| Sbjct: 33812 ccgccgcaccccaccccaccc 33792
>emb|BX927407.11| Zebrafish DNA sequence from clone CH211-67F24 in linkage group 13, complete sequence Length = 123739 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1201 aaacttctacacactcagcgt 1221 ||||||||||||||||||||| Sbjct: 31893 aaacttctacacactcagcgt 31913
>emb|CR857699.1| Pongo pygmaeus mRNA; cDNA DKFZp459J241 (from clone DKFZp459J241) Length = 4640 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ccacacccgctgctgccgccgccac 75 ||||| ||||||||||||||||||| Sbjct: 38 ccacagccgctgctgccgccgccac 14
>gb|AF042280.1|AF042280 Ralstonia eutropha muconolactone isomerase (catC) and 3-oxoadipate enol-lactone hydrolase (catD2) genes, complete cds; and unknown genes Length = 12466 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 tccgccgccgctggccggaag 617 ||||||||||||||||||||| Sbjct: 7519 tccgccgccgctggccggaag 7539
>emb|BX640952.1|HSM807101 Homo sapiens mRNA; cDNA DKFZp686E20132 (from clone DKFZp686E20132) Length = 3650 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ccacacccgctgctgccgccgccac 75 ||||| ||||||||||||||||||| Sbjct: 32 ccacagccgctgctgccgccgccac 8
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cgccgccactcctccccgtcg 87 ||||||||||||||||||||| Sbjct: 54748 cgccgccactcctccccgtcg 54728
>emb|BX769173.6| Zebrafish DNA sequence from clone DKEY-62J22 in linkage group 3, complete sequence Length = 194589 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1439 attgagctaaaacaacccaag 1459 ||||||||||||||||||||| Sbjct: 173870 attgagctaaaacaacccaag 173850
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 78949 ccgcaccccaccccaccccac 78969
>gb|AC068669.21| Homo sapiens chromosome 17, clone RP11-749I16, complete sequence Length = 194780 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 cgcaccccaccccaccccact 36 ||||||||||||||||||||| Sbjct: 45876 cgcaccccaccccaccccact 45856
>gb|AC037459.16| Homo sapiens chromosome 8, clone RP11-582J16, complete sequence Length = 174888 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 ccacacccgctgctgccgccgccac 75 ||||| ||||||||||||||||||| Sbjct: 125596 ccacagccgctgctgccgccgccac 125572
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1383 aaggtgacaacaagagtttag 1403 ||||||||||||||||||||| Sbjct: 61722 aaggtgacaacaagagtttag 61742
>dbj|AK073750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070L21, full insert sequence Length = 1295 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 455 ccgcaccccaccccaccccac 435
>gb|AC158669.3| Mus musculus 6 BAC RP23-66K6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 242779 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 109092 ccgcaccccaccccaccccac 109112
>gb|AC102224.21| Mus musculus chromosome 3, clone RP24-372D1, complete sequence Length = 196936 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 12104 ccgcaccccaccccaccccac 12124
>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete sequence Length = 214840 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 caccccaccccaccccactag 38 ||||||||||||||||||||| Sbjct: 24544 caccccaccccaccccactag 24564
>emb|AL807810.19| Mouse DNA sequence from clone RP23-186F3 on chromosome 4, complete sequence Length = 165488 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 54678 ccgcaccccaccccaccccac 54658
>gb|AC153639.4| Mus musculus 6 BAC RP23-124H2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190211 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 178759 ccgcaccccaccccaccccac 178739
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 64 tgccgccgccactcctccccgtcgtcgtc 92 ||||||||||||||||| |||||||||| Sbjct: 83399 tgccgccgccactcctcgtcgtcgtcgtc 83427
>emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb0077A02 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131346 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 64 tgccgccgccactcctccccgtcgtcgtc 92 ||||||||||||||||| |||||||||| Sbjct: 79263 tgccgccgccactcctcgtcgtcgtcgtc 79291
>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161808 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 64 tgccgccgccactcctccccgtcgtcgtc 92 ||||||||||||||||| |||||||||| Sbjct: 30872 tgccgccgccactcctcgtcgtcgtcgtc 30900
>gb|AC153850.3| Mus musculus 6 BAC RP23-81F19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194042 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 caccccaccccaccccactag 38 ||||||||||||||||||||| Sbjct: 107240 caccccaccccaccccactag 107220
>emb|AL935265.4| Zebrafish DNA sequence from clone DKEY-66M24, complete sequence Length = 197137 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1439 attgagctaaaacaacccaag 1459 ||||||||||||||||||||| Sbjct: 100451 attgagctaaaacaacccaag 100471
>emb|AL672003.6| Mouse DNA sequence from clone RP23-285G5 on chromosome X, complete sequence Length = 221912 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 cgcaccccaccccaccccact 36 ||||||||||||||||||||| Sbjct: 52376 cgcaccccaccccaccccact 52396
>emb|AL049911.2| Homo sapiens chromosome 21 PAC RPCIP704C216Q2, complete sequence Length = 111648 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 776 ggcagccaggcagtggtgctc 796 ||||||||||||||||||||| Sbjct: 28657 ggcagccaggcagtggtgctc 28677
>emb|X95536.1|HSREOR H.sapiens ear1 gene Length = 1999 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 cgcaccccaccccaccccact 36 ||||||||||||||||||||| Sbjct: 1311 cgcaccccaccccaccccact 1331
>gb|AC170752.2| Mus musculus BAC clone RP23-116B8 from chromosome 10, complete sequence Length = 194054 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccgcaccccaccccaccccac 35 ||||||||||||||||||||| Sbjct: 49734 ccgcaccccaccccaccccac 49754
>emb|AL805936.8| Mouse DNA sequence from clone RP23-120K6 on chromosome X, complete sequence Length = 151030 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 acccgctgctgccgccgccac 75 ||||||||||||||||||||| Sbjct: 45841 acccgctgctgccgccgccac 45821 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 255,689,457 Number of extensions: 13388259 Number of successful extensions: 305485 Number of sequences better than 10.0: 93 Number of HSP's gapped: 305482 Number of HSP's successfully gapped: 96 Length of query: 1746 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1723 Effective length of database: 18,503,978,556 Effective search space: 31882355051988 Effective search space used: 31882355051988 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)