ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf97h14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056784.1| Oryza sativa (japonica cultivar-group) Os03g0383900 (Os03g0383900) mRNA, complete cds Length = 948 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 234 gcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaa 293 |||||| |||||||| |||||||| |||||||| || || ||||||| |||||||||||| Sbjct: 236 gcagactgtggagctgaaggtcaggatggactgtgatgggtgcgagctcaaggtcaagaa 295 Query: 294 cgcgctctcctccatgaaaggggtcagatcagtgaacatcaacaggaagcagcagaaggt 353 ||| |||||| || ||||||| ||| || ||||| || |||||||||||||||||||| Sbjct: 296 cgccctctccaccttgaaaggcgtcgagtcggtgaagattaacaggaagcagcagaaggt 355 Query: 354 gacggtaaccgggtacgcggagcccagcaaggtgctgaggaaggcgcagtccacgggcaa 413 |||||| | |||||||| |||| |||||||||||||||||||||||||||| ||||| || Sbjct: 356 gacggtgagcgggtacgtggaggccagcaaggtgctgaggaaggcgcagtcgacggggaa 415 Query: 414 gaaggccgagatatggccctacgtgccctacagccaggtcagccagccctacgtcgccg 472 |||| ||||| | ||||| |||||||| |||||| || |||||||| |||||||||| Sbjct: 416 gaagtccgagctgtggccgtacgtgccgtacagcgcggcgagccagccgtacgtcgccg 474
>dbj|AK069713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033I19, full insert sequence Length = 949 Score = 212 bits (107), Expect = 1e-51 Identities = 206/239 (86%) Strand = Plus / Plus Query: 234 gcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaa 293 |||||| |||||||| |||||||| |||||||| || || ||||||| |||||||||||| Sbjct: 237 gcagactgtggagctgaaggtcaggatggactgtgatgggtgcgagctcaaggtcaagaa 296 Query: 294 cgcgctctcctccatgaaaggggtcagatcagtgaacatcaacaggaagcagcagaaggt 353 ||| |||||| || ||||||| ||| || ||||| || |||||||||||||||||||| Sbjct: 297 cgccctctccaccttgaaaggcgtcgagtcggtgaagattaacaggaagcagcagaaggt 356 Query: 354 gacggtaaccgggtacgcggagcccagcaaggtgctgaggaaggcgcagtccacgggcaa 413 |||||| | |||||||| |||| |||||||||||||||||||||||||||| ||||| || Sbjct: 357 gacggtgagcgggtacgtggaggccagcaaggtgctgaggaaggcgcagtcgacggggaa 416 Query: 414 gaaggccgagatatggccctacgtgccctacagccaggtcagccagccctacgtcgccg 472 |||| ||||| | ||||| |||||||| |||||| || |||||||| |||||||||| Sbjct: 417 gaagtccgagctgtggccgtacgtgccgtacagcgcggcgagccagccgtacgtcgccg 475
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 151 bits (76), Expect = 4e-33 Identities = 130/148 (87%) Strand = Plus / Plus Query: 325 gtgaacatcaacaggaagcagcagaaggtgacggtaaccgggtacgcggagcccagcaag 384 ||||| || |||||||||||||||||||||||||| | |||||||| |||| |||||||| Sbjct: 15057703 gtgaagattaacaggaagcagcagaaggtgacggtgagcgggtacgtggaggccagcaag 15057762 Query: 385 gtgctgaggaaggcgcagtccacgggcaagaaggccgagatatggccctacgtgccctac 444 |||||||||||||||||||| ||||| |||||| ||||| | ||||| |||||||| ||| Sbjct: 15057763 gtgctgaggaaggcgcagtcgacggggaagaagtccgagctgtggccgtacgtgccgtac 15057822 Query: 445 agccaggtcagccagccctacgtcgccg 472 ||| || |||||||| |||||||||| Sbjct: 15057823 agcgcggcgagccagccgtacgtcgccg 15057850 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 234 gcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaa 293 |||||| |||||||| |||||||| |||||||| || || ||||||| |||||||||||| Sbjct: 15057467 gcagactgtggagctgaaggtcaggatggactgtgatgggtgcgagctcaaggtcaagaa 15057526 Query: 294 cgcgctctcctccatgaaagg 314 ||| |||||| || ||||||| Sbjct: 15057527 cgccctctccaccttgaaagg 15057547 Score = 50.1 bits (25), Expect = 0.012 Identities = 34/37 (91%) Strand = Plus / Minus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgt 616 |||| |||||| ||| ||||||||||||||||||||| Sbjct: 3028891 ttcagcgacgagaaccccaactcctgcgccgtcatgt 3028855
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 151 bits (76), Expect = 4e-33 Identities = 130/148 (87%) Strand = Plus / Minus Query: 325 gtgaacatcaacaggaagcagcagaaggtgacggtaaccgggtacgcggagcccagcaag 384 ||||| || |||||||||||||||||||||||||| | |||||||| |||| |||||||| Sbjct: 91604 gtgaagattaacaggaagcagcagaaggtgacggtgagcgggtacgtggaggccagcaag 91545 Query: 385 gtgctgaggaaggcgcagtccacgggcaagaaggccgagatatggccctacgtgccctac 444 |||||||||||||||||||| ||||| |||||| ||||| | ||||| |||||||| ||| Sbjct: 91544 gtgctgaggaaggcgcagtcgacggggaagaagtccgagctgtggccgtacgtgccgtac 91485 Query: 445 agccaggtcagccagccctacgtcgccg 472 ||| || |||||||| |||||||||| Sbjct: 91484 agcgcggcgagccagccgtacgtcgccg 91457 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 234 gcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaa 293 |||||| |||||||| |||||||| |||||||| || || ||||||| |||||||||||| Sbjct: 91840 gcagactgtggagctgaaggtcaggatggactgtgatgggtgcgagctcaaggtcaagaa 91781 Query: 294 cgcgctctcctccatgaaagg 314 ||| |||||| || ||||||| Sbjct: 91780 cgccctctccaccttgaaagg 91760
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 222 gaggaagcagacgcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcg 281 |||||||||| |||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 11922875 gaggaagcagttccagacggtggagctcaaggtgaggatggactgcgacggctgcgagct 11922934 Query: 282 caaggtcaagaacgcgctctcctccatgaaagg 314 ||| |||| |||||| |||||| ||||||||| Sbjct: 11922935 caaagtcaggaacgccctctccagcatgaaagg 11922967 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 406 acgggcaagaaggccgagatatggccctacgtgccctaca 445 ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 11923656 acggggaagaaggcggagatctggccctacgtgccctaca 11923695
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 222 gaggaagcagacgcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcg 281 |||||||||| |||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 104365 gaggaagcagttccagacggtggagctcaaggtgaggatggactgcgacggctgcgagct 104424 Query: 282 caaggtcaagaacgcgctctcctccatgaaagg 314 ||| |||| |||||| |||||| ||||||||| Sbjct: 104425 caaagtcaggaacgccctctccagcatgaaagg 104457 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 406 acgggcaagaaggccgagatatggccctacgtgccctaca 445 ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 105146 acggggaagaaggcggagatctggccctacgtgccctaca 105185
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 222 gaggaagcagacgcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcg 281 |||||||||| |||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 27355 gaggaagcagttccagacggtggagctcaaggtgaggatggactgcgacggctgcgagct 27414 Query: 282 caaggtcaagaacgcgctctcctccatgaaagg 314 ||| |||| |||||| |||||| ||||||||| Sbjct: 27415 caaagtcaggaacgccctctccagcatgaaagg 27447 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 406 acgggcaagaaggccgagatatggccctacgtgccctaca 445 ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 28136 acggggaagaaggcggagatctggccctacgtgccctaca 28175
>ref|NM_001068297.1| Oryza sativa (japonica cultivar-group) Os08g0403300 (Os08g0403300) mRNA, complete cds Length = 453 Score = 85.7 bits (43), Expect = 2e-13 Identities = 105/123 (85%), Gaps = 2/123 (1%) Strand = Plus / Plus Query: 238 acggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaacgcg 297 ||||||||||| ||||| || ||||||||||| |||||||||| |||||||| |||| | Sbjct: 88 acggtggagctgaaggtgaggatggactgcgacggctgcgagctcaaggtcaggaacacc 147 Query: 298 ctctcctccatgaaaggggt-cagatcagtgaacatcaacaggaagcagcagaaggtgac 356 || || |||||||||||| ||| || ||| | || ||||||||||||||||||||||| Sbjct: 148 cttgccaacatgaaaggggtgcag-tcggtggagataaacaggaagcagcagaaggtgac 206 Query: 357 ggt 359 ||| Sbjct: 207 ggt 209 Score = 54.0 bits (27), Expect = 8e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 |||| |||||||||| ||||| ||||||||||||||||| Sbjct: 415 ttcagcgacgacaaccccaacgcctgcgccgtcatgtga 453
>gb|BT009077.1| Triticum aestivum clone wip1c.pk005.e10:fis, full insert mRNA sequence Length = 961 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 235 cagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaa 293 |||||||||||| | |||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 195 cagacggtggagatgaaggtccgcatcgactgcgagggctgcgagcgcaaggtcaagaa 253
>gb|AC189260.1| Brassica rapa subsp. pekinensis clone KBrB021M22, complete sequence Length = 112105 Score = 79.8 bits (40), Expect = 1e-11 Identities = 88/104 (84%) Strand = Plus / Plus Query: 334 aacaggaagcagcagaaggtgacggtaaccgggtacgcggagcccagcaaggtgctgagg 393 |||| ||||||||| ||||||||||| | || |||||||| | ||||||||||||| | Sbjct: 46708 aacaagaagcagcaaaaggtgacggtgagtggttacgcggaagcgagcaaggtgctgaag 46767 Query: 394 aaggcgcagtccacgggcaagaaggccgagatatggccctacgt 437 |||||| | || ||||| |||||||| ||||||||||| ||||| Sbjct: 46768 aaggcgaaatcgacggggaagaaggctgagatatggccttacgt 46811
>emb|AJ508227.1|HVU508227 Hordeum vulgare subsp. vulgare mRNA for farnesylated protein 1 Length = 991 Score = 77.8 bits (39), Expect = 5e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 235 cagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaa 293 |||||||||||| | |||||| | || |||||||||||||||||||||||||||||||| Sbjct: 198 cagacggtggagatgaaggtccggatcgactgcgagggctgcgagcgcaaggtcaagaa 256
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 238 acggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaac 294 ||||||||||| ||||| || ||||||||||| |||||||||| |||||||| |||| Sbjct: 19237569 acggtggagctgaaggtgaggatggactgcgacggctgcgagctcaaggtcaggaac 19237625 Score = 54.0 bits (27), Expect = 8e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 |||| |||||||||| ||||| ||||||||||||||||| Sbjct: 19238208 ttcagcgacgacaaccccaacgcctgcgccgtcatgtga 19238246 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 334 aacaggaagcagcagaaggtgacggt 359 |||||||||||||||||||||||||| Sbjct: 19237977 aacaggaagcagcagaaggtgacggt 19238002 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 22987483 accacggccacggccacggccacggc 22987458 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 4004637 ggccacggccacggccacggc 4004617
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 238 acggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaac 294 ||||||||||| ||||| || ||||||||||| |||||||||| |||||||| |||| Sbjct: 10582 acggtggagctgaaggtgaggatggactgcgacggctgcgagctcaaggtcaggaac 10638 Score = 54.0 bits (27), Expect = 8e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 |||| |||||||||| ||||| ||||||||||||||||| Sbjct: 11221 ttcagcgacgacaaccccaacgcctgcgccgtcatgtga 11259 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 334 aacaggaagcagcagaaggtgacggt 359 |||||||||||||||||||||||||| Sbjct: 10990 aacaggaagcagcagaaggtgacggt 11015
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 238 acggtggagctcaaggtcagcatggactgcgagggctgcgagcgcaaggtcaagaac 294 ||||||||||| ||||| || ||||||||||| |||||||||| |||||||| |||| Sbjct: 159934 acggtggagctgaaggtgaggatggactgcgacggctgcgagctcaaggtcaggaac 159990 Score = 54.0 bits (27), Expect = 8e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 |||| |||||||||| ||||| ||||||||||||||||| Sbjct: 160573 ttcagcgacgacaaccccaacgcctgcgccgtcatgtga 160611 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Plus Query: 334 aacaggaagcagcagaaggtgacggt 359 |||||||||||||||||||||||||| Sbjct: 160342 aacaggaagcagcagaaggtgacggt 160367
>gb|AY108632.1| Zea mays PCO084337 mRNA sequence Length = 798 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 404 ccacgggcaagaaggccgagatatggccctacgtgccctaca 445 |||| |||||||| |||||||| ||||||||||||||||||| Sbjct: 447 ccaccggcaagaacgccgagatgtggccctacgtgccctaca 488
>gb|DQ245512.1| Zea mays clone 16559 mRNA sequence Length = 849 Score = 58.0 bits (29), Expect = 5e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 575 acatgttcaacgacgacaacgccaactcctgcgccgtcatgtgat 619 ||||||||||||||||| ||| |||| ||||| |||||||||||| Sbjct: 546 acatgttcaacgacgacgacgtcaacgcctgctccgtcatgtgat 590 Score = 42.1 bits (21), Expect = 3.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 234 gcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgc 282 ||||||||||||||| ||||| ||||| |||| ||||||||||||| Sbjct: 193 gcagacggtggagctgaaggtgcgcatgtgctgctcgggctgcgagcgc 241
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 58.0 bits (29), Expect = 5e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 241 gtggagctcaaggtcagcatggactgcgagggctgcgagcg 281 |||||||||| |||||| |||||||||||| |||||||||| Sbjct: 31589457 gtggagctcagggtcaggatggactgcgagcgctgcgagcg 31589497 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 catggactgcgagggctgcgag 279 |||||||||||||||||||||| Sbjct: 27978514 catggactgcgagggctgcgag 27978535 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 4425968 ggccacggccacggccacggc 4425988 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 400 cagtccacgggcaagaaggccgagatatggccc 432 ||||||||||| ||||||||||| |||||||| Sbjct: 31589978 cagtccacggggaagaaggccgaactatggccc 31590010
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 58.0 bits (29), Expect = 5e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 241 gtggagctcaaggtcagcatggactgcgagggctgcgagcg 281 |||||||||| |||||| |||||||||||| |||||||||| Sbjct: 80017 gtggagctcagggtcaggatggactgcgagcgctgcgagcg 80057 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 400 cagtccacgggcaagaaggccgagatatggccc 432 ||||||||||| ||||||||||| |||||||| Sbjct: 80538 cagtccacggggaagaaggccgaactatggccc 80570
>dbj|AK120012.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-A12, full insert sequence Length = 1741 Score = 58.0 bits (29), Expect = 5e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 241 gtggagctcaaggtcagcatggactgcgagggctgcgagcg 281 |||||||||| |||||| |||||||||||| |||||||||| Sbjct: 742 gtggagctcagggtcaggatggactgcgagcgctgcgagcg 782 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 400 cagtccacgggcaagaaggccgagatatggccc 432 ||||||||||| ||||||||||| |||||||| Sbjct: 1263 cagtccacggggaagaaggccgaactatggccc 1295
>gb|DQ246098.1| Zea mays clone 16728 mRNA sequence Length = 888 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 222 gaggaagcagacgcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcg 281 |||||||||| |||||||||||| | ||||| |||| |||||||| || |||||||| Sbjct: 214 gaggaagcagttccagacggtggagatgaaggtgcgcatcgactgcgaagggtgcgagcg 273 Query: 282 caaggtcaagaa 293 |||||| ||||| Sbjct: 274 caaggtgaagaa 285
>ref|NM_001069536.1| Oryza sativa (japonica cultivar-group) Os09g0364800 (Os09g0364800) mRNA, partial cds Length = 749 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 406 acgggcaagaaggccgagatatggccctacgtgccctaca 445 ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 378 acggggaagaaggcggagatctggccctacgtgccctaca 417
>dbj|AK068537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152L24, full insert sequence Length = 751 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 406 acgggcaagaaggccgagatatggccctacgtgccctaca 445 ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 380 acggggaagaaggcggagatctggccctacgtgccctaca 419
>gb|AY112463.1| Zea mays CL22709_1 mRNA sequence Length = 820 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 222 gaggaagcagacgcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcg 281 |||||||||| |||||||||||| | ||||| |||| |||||||| || |||||||| Sbjct: 645 gaggaagcagttccagacggtggagatgaaggtgcgcatcgactgcgaagggtgcgagcg 586 Query: 282 caaggtcaagaa 293 |||||| ||||| Sbjct: 585 caaggtgaagaa 574
>gb|DQ244990.1| Zea mays clone 12071 mRNA sequence Length = 668 Score = 54.0 bits (27), Expect = 8e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 185 accatggccacggccacggccacggca 211 ||||||||||||||||||||||||||| Sbjct: 148 accatggccacggccacggccacggca 122
>emb|AJ549118.1|HVU549118 Hordeum vulgare subsp. vulgare mRNA for farnesylated protein 2 (fp2 gene) Length = 668 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 259 atggactgcgagggctgcgagcgcaaggtcaagaacgc 296 |||||||| |||||||||||| | |||||||||||||| Sbjct: 109 atggactgtgagggctgcgagagaaaggtcaagaacgc 146 Score = 44.1 bits (22), Expect = 0.75 Identities = 37/42 (88%) Strand = Plus / Plus Query: 349 aaggtgacggtaaccgggtacgcggagcccagcaaggtgctg 390 ||||||||||| || |||| || |||||| |||||||||||| Sbjct: 199 aaggtgacggtgacggggttcgtggagccgagcaaggtgctg 240
>ref|NM_001055545.1| Oryza sativa (japonica cultivar-group) Os03g0156600 (Os03g0156600) mRNA, complete cds Length = 822 Score = 50.1 bits (25), Expect = 0.012 Identities = 34/37 (91%) Strand = Plus / Plus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgt 616 |||| |||||| ||| ||||||||||||||||||||| Sbjct: 509 ttcagcgacgagaaccccaactcctgcgccgtcatgt 545
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 50.1 bits (25), Expect = 0.012 Identities = 34/37 (91%) Strand = Plus / Plus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgt 616 |||| |||||| ||| ||||||||||||||||||||| Sbjct: 67481 ttcagcgacgagaaccccaactcctgcgccgtcatgt 67517
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 50.1 bits (25), Expect = 0.012 Identities = 34/37 (91%) Strand = Plus / Minus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgt 616 |||| |||||| ||| ||||||||||||||||||||| Sbjct: 166267 ttcagcgacgagaaccccaactcctgcgccgtcatgt 166231
>ref|NM_019763.1| Mus musculus SPEN homolog, transcriptional regulator (Drosophila) (Spen), mRNA gb|AF156529.1|AF156529 Mus musculus Msx2 interacting nuclear target protein mRNA, complete cds Length = 10839 Score = 50.1 bits (25), Expect = 0.012 Identities = 25/25 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggcagca 214 ||||||||||||||||||||||||| Sbjct: 6459 ggccacggccacggccacggcagca 6483
>emb|AJ549119.1|HVU549119 Hordeum vulgare subsp. vulgare mRNA for farnesylated protein 3 (fp3 gene) Length = 650 Score = 50.1 bits (25), Expect = 0.012 Identities = 40/45 (88%) Strand = Plus / Plus Query: 575 acatgttcaacgacgacaacgccaactcctgcgccgtcatgtgat 619 |||||||||||||||| ||| |||| ||||| |||||||||||| Sbjct: 413 acatgttcaacgacgaggacgtcaacgcctgcaccgtcatgtgat 457
>dbj|AK105367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G06, full insert sequence Length = 822 Score = 50.1 bits (25), Expect = 0.012 Identities = 34/37 (91%) Strand = Plus / Plus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgt 616 |||| |||||| ||| ||||||||||||||||||||| Sbjct: 509 ttcagcgacgagaaccccaactcctgcgccgtcatgt 545
>ref|NM_120131.1| Arabidopsis thaliana metal ion binding (AT4G39700) mRNA, complete cds Length = 477 Score = 48.1 bits (24), Expect = 0.048 Identities = 84/104 (80%) Strand = Plus / Plus Query: 334 aacaggaagcagcagaaggtgacggtaaccgggtacgcggagcccagcaaggtgctgagg 393 |||| |||||| ||||||||||| || | || || ||||| | ||||||||||||| | Sbjct: 193 aacaagaagcaacagaaggtgacagtgagtggttatgcggatgcgagcaaggtgctgaag 252 Query: 394 aaggcgcagtccacgggcaagaaggccgagatatggccctacgt 437 ||||| | | ||||| ||||| |||||||||||||| ||||| Sbjct: 253 aaggctaaagcgacggggaagaaagccgagatatggccgtacgt 296
>ref|NM_105774.2| Arabidopsis thaliana metal ion binding (AT1G71050) mRNA, complete cds Length = 972 Score = 48.1 bits (24), Expect = 0.048 Identities = 48/56 (85%) Strand = Plus / Plus Query: 259 atggactgcgagggctgcgagcgcaaggtcaagaacgcgctctcctccatgaaagg 314 ||||||||||| || || || |||| |||||||||||| | |||||||||||||| Sbjct: 452 atggactgcgatggttgtgaacgcagagtcaagaacgcggtttcctccatgaaagg 507
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 48.1 bits (24), Expect = 0.048 Identities = 42/48 (87%) Strand = Plus / Plus Query: 235 cagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgc 282 |||||||||||||||||||| | ||| |||||| |||||||||||| Sbjct: 56248 cagacggtggagctcaaggtgcggatgtgctgcgaaggctgcgagcgc 56295
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 48.1 bits (24), Expect = 0.048 Identities = 42/48 (87%) Strand = Plus / Plus Query: 235 cagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgc 282 |||||||||||||||||||| | ||| |||||| |||||||||||| Sbjct: 20416100 cagacggtggagctcaaggtgcggatgtgctgcgaaggctgcgagcgc 20416147 Score = 44.1 bits (22), Expect = 0.75 Identities = 37/42 (88%) Strand = Plus / Plus Query: 577 atgttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 ||||||| |||||| ||| ||||| ||||| ||||||||||| Sbjct: 15314332 atgttcagcgacgagaaccccaacgcctgctccgtcatgtga 15314373
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 48.1 bits (24), Expect = 0.048 Identities = 24/24 (100%) Strand = Plus / Plus Query: 186 ccatggccacggccacggccacgg 209 |||||||||||||||||||||||| Sbjct: 7847496 ccatggccacggccacggccacgg 7847519 Score = 48.1 bits (24), Expect = 0.048 Identities = 24/24 (100%) Strand = Plus / Minus Query: 186 ccatggccacggccacggccacgg 209 |||||||||||||||||||||||| Sbjct: 36209105 ccatggccacggccacggccacgg 36209082 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 186 ccatggccacggccacggccac 207 |||||||||||||||||||||| Sbjct: 41984405 ccatggccacggccacggccac 41984384
>gb|AY087875.1| Arabidopsis thaliana clone 39127 mRNA, complete sequence Length = 660 Score = 48.1 bits (24), Expect = 0.048 Identities = 48/56 (85%) Strand = Plus / Plus Query: 259 atggactgcgagggctgcgagcgcaaggtcaagaacgcgctctcctccatgaaagg 314 ||||||||||| || || || |||| |||||||||||| | |||||||||||||| Sbjct: 140 atggactgcgatggttgtgaacgcagagtcaagaacgcggtttcctccatgaaagg 195
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91 Length = 198151 Score = 48.1 bits (24), Expect = 0.048 Identities = 84/104 (80%) Strand = Plus / Plus Query: 334 aacaggaagcagcagaaggtgacggtaaccgggtacgcggagcccagcaaggtgctgagg 393 |||| |||||| ||||||||||| || | || || ||||| | ||||||||||||| | Sbjct: 144792 aacaagaagcaacagaaggtgacagtgagtggttatgcggatgcgagcaaggtgctgaag 144851 Query: 394 aaggcgcagtccacgggcaagaaggccgagatatggccctacgt 437 ||||| | | ||||| ||||| |||||||||||||| ||||| Sbjct: 144852 aaggctaaagcgacggggaagaaagccgagatatggccgtacgt 144895
>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project) Length = 129047 Score = 48.1 bits (24), Expect = 0.048 Identities = 84/104 (80%) Strand = Plus / Plus Query: 334 aacaggaagcagcagaaggtgacggtaaccgggtacgcggagcccagcaaggtgctgagg 393 |||| |||||| ||||||||||| || | || || ||||| | ||||||||||||| | Sbjct: 119578 aacaagaagcaacagaaggtgacagtgagtggttatgcggatgcgagcaaggtgctgaag 119637 Query: 394 aaggcgcagtccacgggcaagaaggccgagatatggccctacgt 437 ||||| | | ||||| ||||| |||||||||||||| ||||| Sbjct: 119638 aaggctaaagcgacggggaagaaagccgagatatggccgtacgt 119681
>emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project) Length = 88343 Score = 48.1 bits (24), Expect = 0.048 Identities = 84/104 (80%) Strand = Plus / Plus Query: 334 aacaggaagcagcagaaggtgacggtaaccgggtacgcggagcccagcaaggtgctgagg 393 |||| |||||| ||||||||||| || | || || ||||| | ||||||||||||| | Sbjct: 27762 aacaagaagcaacagaaggtgacagtgagtggttatgcggatgcgagcaaggtgctgaag 27821 Query: 394 aaggcgcagtccacgggcaagaaggccgagatatggccctacgt 437 ||||| | | ||||| ||||| |||||||||||||| ||||| Sbjct: 27822 aaggctaaagcgacggggaagaaagccgagatatggccgtacgt 27865
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 48.1 bits (24), Expect = 0.048 Identities = 24/24 (100%) Strand = Plus / Plus Query: 186 ccatggccacggccacggccacgg 209 |||||||||||||||||||||||| Sbjct: 42442 ccatggccacggccacggccacgg 42465
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 48.1 bits (24), Expect = 0.048 Identities = 24/24 (100%) Strand = Plus / Minus Query: 186 ccatggccacggccacggccacgg 209 |||||||||||||||||||||||| Sbjct: 86118 ccatggccacggccacggccacgg 86095
>gb|AC016972.7|AC016972 Arabidopsis thaliana chromosome 1 BAC F23N20 genomic sequence, complete sequence Length = 66653 Score = 48.1 bits (24), Expect = 0.048 Identities = 48/56 (85%) Strand = Plus / Minus Query: 259 atggactgcgagggctgcgagcgcaaggtcaagaacgcgctctcctccatgaaagg 314 ||||||||||| || || || |||| |||||||||||| | |||||||||||||| Sbjct: 28597 atggactgcgatggttgtgaacgcagagtcaagaacgcggtttcctccatgaaagg 28542
>gb|BT003666.1| Arabidopsis thaliana At1g71050 mRNA, complete cds Length = 459 Score = 48.1 bits (24), Expect = 0.048 Identities = 48/56 (85%) Strand = Plus / Plus Query: 259 atggactgcgagggctgcgagcgcaaggtcaagaacgcgctctcctccatgaaagg 314 ||||||||||| || || || |||| |||||||||||| | |||||||||||||| Sbjct: 106 atggactgcgatggttgtgaacgcagagtcaagaacgcggtttcctccatgaaagg 161
>dbj|AK117880.1| Arabidopsis thaliana At1g71050 mRNA for putative isoprenylated protein, complete cds, clone: RAFL19-05-L08 Length = 972 Score = 48.1 bits (24), Expect = 0.048 Identities = 48/56 (85%) Strand = Plus / Plus Query: 259 atggactgcgagggctgcgagcgcaaggtcaagaacgcgctctcctccatgaaagg 314 ||||||||||| || || || |||| |||||||||||| | |||||||||||||| Sbjct: 452 atggactgcgatggttgtgaacgcagagtcaagaacgcggtttcctccatgaaagg 507
>ref|NM_001061878.1| Oryza sativa (japonica cultivar-group) Os05g0368600 (Os05g0368600) mRNA, complete cds Length = 1133 Score = 46.1 bits (23), Expect = 0.19 Identities = 35/39 (89%) Strand = Plus / Plus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 |||| |||||||||||||||||| ||| |||||||||| Sbjct: 1049 ttcagcgacgacaacgccaactcttgcagcgtcatgtga 1087
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 46.1 bits (23), Expect = 0.19 Identities = 35/39 (89%) Strand = Plus / Minus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 |||| |||||||||||||||||| ||| |||||||||| Sbjct: 100114 ttcagcgacgacaacgccaactcttgcagcgtcatgtga 100076
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.19 Identities = 26/27 (96%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggcagcaga 216 ||||||||||||||||||||| ||||| Sbjct: 3159144 ggccacggccacggccacggccgcaga 3159118 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 4246613 accacggccacggccacggccacggc 4246638 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 2562146 ggccacggccacggccacggc 2562166 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 3159150 ggccacggccacggccacggc 3159130 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 ccacggccacggccacggcagcaga 216 ||||| ||||||||||||||||||| Sbjct: 3240558 ccacgcccacggccacggcagcaga 3240582 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 4246624 ggccacggccacggccacggc 4246644 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 4246630 ggccacggccacggccacggc 4246650 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 4246636 ggccacggccacggccacggc 4246656
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.19 Identities = 35/39 (89%) Strand = Plus / Minus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 |||| |||||||||||||||||| ||| |||||||||| Sbjct: 17570309 ttcagcgacgacaacgccaactcttgcagcgtcatgtga 17570271
>gb|AC137894.5| Homo sapiens chromosome 11, clone RP13-46H24, complete sequence Length = 165000 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 ccatggccacggccacggccacg 208 ||||||||||||||||||||||| Sbjct: 163333 ccatggccacggccacggccacg 163355
>gb|AC138374.2| Homo sapiens chromosome 11, clone CTD-2647G13, complete sequence Length = 196424 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 ccatggccacggccacggccacg 208 ||||||||||||||||||||||| Sbjct: 57576 ccatggccacggccacggccacg 57598
>dbj|AK058953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-A11, full insert sequence Length = 1133 Score = 46.1 bits (23), Expect = 0.19 Identities = 35/39 (89%) Strand = Plus / Plus Query: 580 ttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 |||| |||||||||||||||||| ||| |||||||||| Sbjct: 1049 ttcagcgacgacaacgccaactcttgcagcgtcatgtga 1087
>dbj|AP006284.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-496I9, complete sequence Length = 104658 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 186 ccatggccacggccacggccacg 208 ||||||||||||||||||||||| Sbjct: 362 ccatggccacggccacggccacg 384
>ref|NM_001068538.1| Oryza sativa (japonica cultivar-group) Os08g0467400 (Os08g0467400) mRNA, complete cds Length = 2553 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 244 accacggccacggccacggccacggc 269
>ref|NM_001064084.1| Oryza sativa (japonica cultivar-group) Os06g0332900 (Os06g0332900) mRNA, complete cds Length = 1138 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 919 accacggccacggccacggccacggc 894
>ref|NM_001054290.1| Oryza sativa (japonica cultivar-group) Os02g0683800 (Os02g0683800) mRNA, complete cds Length = 600 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 catggactgcgagggctgcgag 279 |||||||||||||||||||||| Sbjct: 142 catggactgcgagggctgcgag 163
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 catggccacggccacggccacg 208 |||||||||||||||||||||| Sbjct: 11591362 catggccacggccacggccacg 11591383
>emb|CT009601.13| Mouse DNA sequence from clone RP23-38D2 on chromosome 14, complete sequence Length = 223345 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 186 ccatggccacggccacggccac 207 |||||||||||||||||||||| Sbjct: 91688 ccatggccacggccacggccac 91667
>gb|AC010053.7| Drosophila melanogaster 3L BAC RP98-6H19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 128765 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 catggccacggccacggccacg 208 |||||||||||||||||||||| Sbjct: 1603 catggccacggccacggccacg 1624
>gb|AC021630.11| Mus musculus chromosome 14, clone RP23-178B24, complete sequence Length = 202804 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 186 ccatggccacggccacggccac 207 |||||||||||||||||||||| Sbjct: 46251 ccatggccacggccacggccac 46272
>gb|AC010033.8| Drosophila melanogaster 3L BAC RP98-3I5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 188653 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 catggccacggccacggccacg 208 |||||||||||||||||||||| Sbjct: 128090 catggccacggccacggccacg 128111
>tpg|BK002086.1| TPA_inf: Drosophila melanogaster HDC09647 (HDC09647) gene, partial cds Length = 1120 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 catggccacggccacggccacg 208 |||||||||||||||||||||| Sbjct: 28 catggccacggccacggccacg 49
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 13044055 accacggccacggccacggccacggc 13044080 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggca 211 |||||||||||||||||||||| Sbjct: 13449367 ggccacggccacggccacggca 13449346
>gb|AF350499.1|AF350499 Mus musculus H+,K+-ATPase alpha 2 subunit (Hkalpha2) gene, complete cds Length = 34603 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 186 ccatggccacggccacggccac 207 |||||||||||||||||||||| Sbjct: 10171 ccatggccacggccacggccac 10192
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 186 ccatggccacggccacggccac 207 |||||||||||||||||||||| Sbjct: 86482 ccatggccacggccacggccac 86461
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 44.1 bits (22), Expect = 0.75 Identities = 37/42 (88%) Strand = Plus / Plus Query: 577 atgttcaacgacgacaacgccaactcctgcgccgtcatgtga 618 ||||||| |||||| ||| ||||| ||||| ||||||||||| Sbjct: 31695 atgttcagcgacgagaaccccaacgcctgctccgtcatgtga 31736
>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1294_G12 Length = 121979 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggca 211 |||||||||||||||||||||| Sbjct: 110799 ggccacggccacggccacggca 110778
>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0428A03 Length = 136799 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggca 211 |||||||||||||||||||||| Sbjct: 60791 ggccacggccacggccacggca 60770
>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0531C01 Length = 158574 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 82856 accacggccacggccacggccacggc 82881
>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0577H07 Length = 126757 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 126432 accacggccacggccacggccacggc 126457
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 catggactgcgagggctgcgag 279 |||||||||||||||||||||| Sbjct: 22176 catggactgcgagggctgcgag 22197
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 catggactgcgagggctgcgag 279 |||||||||||||||||||||| Sbjct: 105966 catggactgcgagggctgcgag 105987
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 161321 accacggccacggccacggccacggc 161296
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 47211 accacggccacggccacggccacggc 47186
>dbj|AK105607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B01, full insert sequence Length = 1786 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 242 accacggccacggccacggccacggc 267
>dbj|AK102279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089E10, full insert sequence Length = 1972 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 245 accacggccacggccacggccacggc 270
>dbj|AK101041.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001H11, full insert sequence Length = 4372 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 3998 accacggccacggccacggccacggc 3973
>dbj|AK072580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023124L24, full insert sequence Length = 601 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 258 catggactgcgagggctgcgag 279 |||||||||||||||||||||| Sbjct: 143 catggactgcgagggctgcgag 164
>dbj|AK070501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054A11, full insert sequence Length = 2555 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 246 accacggccacggccacggccacggc 271
>dbj|AK059857.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B02, full insert sequence Length = 1138 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Minus Query: 185 accatggccacggccacggccacggc 210 |||| ||||||||||||||||||||| Sbjct: 919 accacggccacggccacggccacggc 894
>gb|AY111904.1| Zea mays CL17328_1 mRNA sequence Length = 686 Score = 44.1 bits (22), Expect = 0.75 Identities = 25/26 (96%) Strand = Plus / Plus Query: 186 ccatggccacggccacggccacggca 211 |||||| ||||||||||||||||||| Sbjct: 547 ccatggtcacggccacggccacggca 572
>emb|AJ534368.1|BTA534368 Bos taurus DGAT2 gene for diacylglycerol O-acyltransferase 2, exon 1 and joined CDS Length = 1352 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 189 tggccacggccacggccacggc 210 |||||||||||||||||||||| Sbjct: 636 tggccacggccacggccacggc 615
>emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide immunosuppressant rapamycin Length = 107379 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggca 211 |||||||||||||||||||||| Sbjct: 71605 ggccacggccacggccacggca 71626 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 71581 ggccacggccacggccacggc 71601 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 71587 ggccacggccacggccacggc 71607 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 71593 ggccacggccacggccacggc 71613 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 71599 ggccacggccacggccacggc 71619
>emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2017C7 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189116 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 189 tggccacggccacggccacggc 210 |||||||||||||||||||||| Sbjct: 97184 tggccacggccacggccacggc 97205
>emb|AL670285.10| Mouse DNA sequence from clone RP23-308N2 on chromosome 4, complete sequence Length = 173935 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 193 cacggccacggccacggcagca 214 |||||||||||||||||||||| Sbjct: 150936 cacggccacggccacggcagca 150915
>dbj|AB055980.1| Mus musculus MINT mRNA for Msx-2 interacting nuclear target protein, complete cds Length = 10718 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 cacggccacggccacggcagca 214 |||||||||||||||||||||| Sbjct: 6327 cacggccacggccacggcagca 6348
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 ccatggccacggccacggccacggc 210 ||||||||| ||||||||||||||| Sbjct: 3818027 ccatggccatggccacggccacggc 3818003
>gb|DQ246200.1| Zea mays clone 19506 mRNA sequence Length = 804 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 208 ggccacggccacggccacggc 228
>gb|DQ244413.1| Zea mays clone 7309 mRNA sequence Length = 1030 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 690 ggccacggccacggccacggc 710
>gb|AC190057.4| Rhesus Macaque BAC CH250-502E5 () complete sequence Length = 171896 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 ggcagcagaaggaggaggaagcaga 232 ||||||||| ||||||||||||||| Sbjct: 138533 ggcagcagatggaggaggaagcaga 138509
>dbj|AK232998.1| Sus scrofa mRNA, clone:LVRM10065C09, expressed in liver Length = 1579 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1177 ggccacggccacggccacggc 1157
>dbj|AK232913.1| Sus scrofa mRNA, clone:LVRM10050D03, expressed in liver Length = 1703 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1292 ggccacggccacggccacggc 1272
>dbj|AK232725.1| Sus scrofa mRNA, clone:LVRM10014C10, expressed in liver Length = 1638 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1227 ggccacggccacggccacggc 1207
>dbj|AK232318.1| Sus scrofa mRNA, clone:LVR010018D10, expressed in liver Length = 1512 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1111 ggccacggccacggccacggc 1091
>dbj|AK232304.1| Sus scrofa mRNA, clone:LVR010016F08, expressed in liver Length = 1457 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1057 ggccacggccacggccacggc 1037
>ref|NM_001052620.1| Oryza sativa (japonica cultivar-group) Os02g0179600 (Os02g0179600) mRNA, complete cds Length = 2172 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 650 ggccacggccacggccacggc 630
>gb|DQ659536.1| Brucella melitensis biovar Neotomae strain ATCC 23459 23S ribosomal protein subunit L22 (rplV) gene, complete cds Length = 402 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 322 ggccacggccacggccacggc 302
>gb|AC190029.3| Rhesus Macaque BAC CH250-361G21 () complete sequence Length = 171531 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 ggcagcagaaggaggaggaagcaga 232 ||||||||| ||||||||||||||| Sbjct: 115760 ggcagcagatggaggaggaagcaga 115736
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1110948 ggccacggccacggccacggc 1110928
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 3394698 ggccacggccacggccacggc 3394678
>ref|NM_026741.2| Mus musculus zinc finger protein 579 (Zfp579), mRNA Length = 2179 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 188 ggccacggccacggccacggc 168
>gb|CP000432.1| Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence Length = 1123075 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 597238 ggccacggccacggccacggc 597218 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 597244 ggccacggccacggccacggc 597224 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 597250 ggccacggccacggccacggc 597230
>ref|XM_001072180.1| PREDICTED: Rattus norvegicus zinc finger protein 579 (predicted) (Znf579_predicted), mRNA Length = 2153 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 183 ggccacggccacggccacggc 163
>ref|XM_218200.3| PREDICTED: Rattus norvegicus zinc finger protein 579 (predicted) (Znf579_predicted), mRNA Length = 2153 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 183 ggccacggccacggccacggc 163
>gb|AC154391.1| Medicago truncatula chromosome 7 BAC clone mth2-143d17, complete sequence Length = 123865 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 580 ttcaacgacgacaacgccaac 600 ||||||||||||||||||||| Sbjct: 72976 ttcaacgacgacaacgccaac 72956
>gb|AC166815.6| Mus musculus chromosome 18, clone RP23-373L14, complete sequence Length = 137949 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 85563 ggccacggccacggccacggc 85543
>gb|AC116386.9| Mus musculus chromosome 15, clone RP23-37B16, complete sequence Length = 185556 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 65110 ggccacggccacggccacggc 65130 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 65116 ggccacggccacggccacggc 65136 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 65122 ggccacggccacggccacggc 65142
>gb|AC154761.2| Mus musculus BAC clone RP24-416E4 from chromosome 17, complete sequence Length = 169027 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 gcagcagaaggaggaggaagc 229 ||||||||||||||||||||| Sbjct: 147941 gcagcagaaggaggaggaagc 147961
>gb|BC046607.1| Mus musculus methyl-CpG binding domain protein 2, mRNA (cDNA clone MGC:54585 IMAGE:6399206), complete cds Length = 1865 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 369 ggccacggccacggccacggc 349
>gb|AC132919.9| Mus musculus chromosome 12, clone RP24-356H3, complete sequence Length = 163965 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 56234 ggccacggccacggccacggc 56214
>gb|AC134831.3| Mus musculus BAC clone RP24-500P4 from chromosome 18, complete sequence Length = 188380 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 169251 ggccacggccacggccacggc 169231
>gb|AC139213.11| Mus musculus chromosome 7, clone RP23-341H2, complete sequence Length = 189709 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 74588 ggccacggccacggccacggc 74608
>gb|BC027096.1| Mus musculus SH3-domain GRB2-like 3, mRNA (cDNA clone MGC:30998 IMAGE:5254139), complete cds Length = 1662 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 77 ggccacggccacggccacggc 57
>gb|BC057289.1| Mus musculus methyl-CpG binding domain protein 2, mRNA (cDNA clone IMAGE:3481683) Length = 1693 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 201 ggccacggccacggccacggc 181
>gb|BC058864.1| Mus musculus methyl-CpG binding domain protein 2, mRNA (cDNA clone IMAGE:3257023) Length = 1681 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 189 ggccacggccacggccacggc 169
>gb|AC024068.16| Mus musculus strain 129S6/SvEvTac clone rp22-86n23 map 1, complete sequence Length = 157066 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 agcagaaggaggaggaagcag 231 ||||||||||||||||||||| Sbjct: 115591 agcagaaggaggaggaagcag 115611
>gb|AC058787.21| Mus musculus strain 129S6/SvEvTac clone rp22-202p02 map 1, complete sequence Length = 156684 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 agcagaaggaggaggaagcag 231 ||||||||||||||||||||| Sbjct: 5014 agcagaaggaggaggaagcag 4994
>gb|AC163400.3| Mus musculus chromosome 15, clone RP24-97G4, complete sequence Length = 168328 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 132147 ggccacggccacggccacggc 132127 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 132153 ggccacggccacggccacggc 132133 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 132159 ggccacggccacggccacggc 132139
>ref|XM_381693.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01517.1) partial mRNA Length = 525 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 202 ggccacggccacggccacggc 182
>gb|BC048385.1| Mus musculus zinc finger protein 579, mRNA (cDNA clone MGC:56878 IMAGE:6309639), complete cds Length = 2520 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 518 ggccacggccacggccacggc 498
>dbj|AK148159.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370037M03 product:hypothetical protein, full insert sequence Length = 3255 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1287 ggccacggccacggccacggc 1267
>gb|AC158577.5| Mus musculus chromosome 1, clone RP24-187D4, complete sequence Length = 155742 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 agcagaaggaggaggaagcag 231 ||||||||||||||||||||| Sbjct: 131652 agcagaaggaggaggaagcag 131632
>dbj|AK147008.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I920087A11 product:methyl-CpG binding domain protein 2, full insert sequence Length = 1729 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 254 ggccacggccacggccacggc 234
>dbj|AK143550.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length enriched library, clone:E970028G20 product:hypothetical Proline-rich region profile/Glycine-rich region profile/Arginine-rich region profile/FYVE/PHD zinc finger containing protein, full insert sequence Length = 3214 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1243 ggccacggccacggccacggc 1223
>dbj|AK157464.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830217J22 product:SH3-domain GRB2-like 3, full insert sequence Length = 2008 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 31 ggccacggccacggccacggc 11
>emb|AJ888887.1| Dalyat mirabilis partial wg gene for wingless Length = 533 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 157 ggccacggccacggccacggc 177
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 4410335 ggccacggccacggccacggc 4410315 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 4410341 ggccacggccacggccacggc 4410321
>gb|DQ350684.1| Ajellomyces capsulatus nitrosative stress induced transcription 28 (NIT28) gene, partial sequence Length = 4572 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 4513 ggccacggccacggccacggc 4533
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 ccatggccacggccacggccacggc 210 |||||||||||| |||||||||||| Sbjct: 26643547 ccatggccacggacacggccacggc 26643523
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 2070436 ggccacggccacggccacggc 2070416
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 20220974 ggccacggccacggccacggc 20220954
>dbj|AB201240.1| Nicotiana tabacum mRNA for NTMTP1A, complete cds Length = 1257 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 catggccacggccacggccac 207 ||||||||||||||||||||| Sbjct: 541 catggccacggccacggccac 561
>dbj|AB201239.1| Nicotiana glauca mRNA for NGMTP1, complete cds Length = 1257 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 catggccacggccacggccac 207 ||||||||||||||||||||| Sbjct: 541 catggccacggccacggccac 561
>emb|AL161896.16| Human DNA sequence from clone RP11-261P24 on chromosome 13 Contains part of the FARP1 gene for (chondrocyte-derived) FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 and a novel gene, complete sequence Length = 96183 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttcttctcttcatcagcttgt 101 ||||||||||||||||||||| Sbjct: 82020 ttcttctcttcatcagcttgt 82000
>emb|Y13924.1|PVY13924 Penaeus vannamei cathepsin L gene Length = 1793 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 atggccacggccacggccacg 208 ||||||||||||||||||||| Sbjct: 45 atggccacggccacggccacg 25
>gb|AF331669.1|AF331669 Dromaius novaehollandiae lysosomal alpha-N-acetyl glucosaminidase gene, complete cds Length = 4217 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 270 ggccacggccacggccacggc 250
>gb|AF331668.1|AF331668 Dromaius novaehollandiae lysosomal alpha-N-acetyl glucosaminidase mRNA, complete cds Length = 2949 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 270 ggccacggccacggccacggc 250
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 171531 ggccacggccacggccacggc 171511
>emb|AL713915.10| Mouse DNA sequence from clone RP23-437C4 on chromosome 11 Contains part of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila), complete sequence Length = 201133 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 154198 ggccacggccacggccacggc 154218
>gb|AC027306.3|AC027306 Homo sapiens chromosome 5 clone CTB-18O10, complete sequence Length = 124510 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 cggagcccagcaaggtgctgaggaa 395 ||||||||||||||||||| ||||| Sbjct: 81844 cggagcccagcaaggtgctcaggaa 81868
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 2311802 ggccacggccacggccacggc 2311782
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 154733 ggccacggccacggccacggc 154713
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 109532 ggccacggccacggccacggc 109552
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 91934 ggccacggccacggccacggc 91914
>ref|XM_956722.1| Neurospora crassa OR74A hypothetical protein (NCU06627.1) partial mRNA Length = 3573 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 aagcttcttctcttcatcagc 97 ||||||||||||||||||||| Sbjct: 3420 aagcttcttctcttcatcagc 3400
>dbj|AK110418.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-H08, full insert sequence Length = 2172 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 650 ggccacggccacggccacggc 630
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 26229 ggccacggccacggccacggc 26209
>gb|AC116474.13| Mus musculus chromosome 17, clone RP23-386F9, complete sequence Length = 221805 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 gcagcagaaggaggaggaagc 229 ||||||||||||||||||||| Sbjct: 190903 gcagcagaaggaggaggaagc 190883
>emb|X78846.1|ZM38G1 Z.Mays Zm38 gene, intron 1 Length = 3045 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 2668 ggccacggccacggccacggc 2688
>dbj|AP002387.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-660L16, complete sequence Length = 170523 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 95567 ggccacggccacggccacggc 95547
>gb|AY110301.1| Zea mays CL15090_1 mRNA sequence Length = 861 Score = 42.1 bits (21), Expect = 3.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 234 gcagacggtggagctcaaggtcagcatggactgcgagggctgcgagcgc 282 ||||||||||||||| ||||| ||||| |||| ||||||||||||| Sbjct: 500 gcagacggtggagctgaaggtgcgcatgtgctgctcgggctgcgagcgc 452
>gb|AY108963.1| Zea mays PCO111665 mRNA sequence Length = 906 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 103 ggccacggccacggccacggc 83
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 2665291 ggccacggccacggccacggc 2665271 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 2665297 ggccacggccacggccacggc 2665277 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 2665303 ggccacggccacggccacggc 2665283 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 ccatggccacggccacggccacggc 210 |||| |||||||||||||||||||| Sbjct: 2665313 ccatcgccacggccacggccacggc 2665289
>gb|AF120983.1|MM2MBD1 Mus musculus methyl-CpG binding protein 2 (Mbd2) gene, exons 1 and 2; and alternatively spliced product, testis-specific methyl-CpG binding protein 2 (Mbd2) gene, complete cds Length = 20461 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 5390 ggccacggccacggccacggc 5370
>gb|AC157563.12| Mus musculus chromosome 7, clone RP23-414I24, complete sequence Length = 200040 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 161725 ggccacggccacggccacggc 161745
>emb|AM156908.1| Zea mays mRNA for transcription factor MYB42 (myb42 gene) Length = 1129 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 742 ggccacggccacggccacggc 762
>gb|AF072245.1|AF072245 Mus musculus testis specific methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds Length = 1100 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 327 ggccacggccacggccacggc 307
>gb|AF072243.1|AF072243 Mus musculus methyl-CpG binding protein MBD2 (Mbd2) mRNA, complete cds Length = 1804 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 327 ggccacggccacggccacggc 307
>gb|AY609549.1| Sus scrofa clone Clu_170351.scr.msk.p1.Contig2, mRNA sequence Length = 1557 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1164 ggccacggccacggccacggc 1144
>gb|BC026698.1| Mus musculus methyl-CpG binding domain protein 2, mRNA (cDNA clone IMAGE:4457229) Length = 1828 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 329 ggccacggccacggccacggc 309
>gb|BC054068.1| Mus musculus zinc finger protein 579, mRNA (cDNA clone IMAGE:5388064) Length = 2520 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 518 ggccacggccacggccacggc 498
>emb|AJ875019.1| Streptoalloteichus hindustanus partial apramycin biosynthesis gene cluster, type strain DSM 44523T Length = 39979 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 39097 ggccacggccacggccacggc 39077 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 39103 ggccacggccacggccacggc 39083 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 39109 ggccacggccacggccacggc 39089
>ref|NM_010773.1| Mus musculus methyl-CpG binding domain protein 2 (Mbd2), mRNA Length = 1953 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 473 ggccacggccacggccacggc 453
>gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, complete sequence Length = 181443 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 7232 ggccacggccacggccacggc 7252
>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101173 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 ccatggccacggccacggccacggc 210 |||||||||||| |||||||||||| Sbjct: 62417 ccatggccacggacacggccacggc 62393
>gb|AC125067.4| Mus musculus BAC clone RP23-431C5 from 12, complete sequence Length = 192938 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 54717 ggccacggccacggccacggc 54697
>emb|BX005247.9| Mouse DNA sequence from clone RP23-377A17 on chromosome 4, complete sequence Length = 63139 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 213 cagaaggaggaggaagcagacgcag 237 |||||||||||||||||||| |||| Sbjct: 34272 cagaaggaggaggaagcagaggcag 34296
>gb|AC068906.14| Mus musculus strain C57BL/6J chromosome 1 clone rp23-240p23, complete sequence Length = 192366 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 agcagaaggaggaggaagcag 231 ||||||||||||||||||||| Sbjct: 18932 agcagaaggaggaggaagcag 18912
>gb|AC034109.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-88k7, complete sequence Length = 227773 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 agcagaaggaggaggaagcag 231 ||||||||||||||||||||| Sbjct: 18932 agcagaaggaggaggaagcag 18912
>gb|DQ147251.1| Zea diploperennis isolate d6 cysteine protease Mir1 gene, partial cds Length = 1029 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 280 ggccacggccacggccacggc 300
>ref|NM_214104.1| Sus scrofa vitronectin (VTN), mRNA dbj|D63145.1|PIGVITRON Pig mRNA for vitronectin, complete cds Length = 1547 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1144 ggccacggccacggccacggc 1124
>dbj|D61396.1| Porcine mRNA for vitronectin, complete cds Length = 1555 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1170 ggccacggccacggccacggc 1150
>dbj|AP000867.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-684B2, complete sequences Length = 199999 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 ggccacggccacggccacggc 210 ||||||||||||||||||||| Sbjct: 1366 ggccacggccacggccacggc 1346 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 119,051,109 Number of extensions: 6287532 Number of successful extensions: 153475 Number of sequences better than 10.0: 173 Number of HSP's gapped: 153401 Number of HSP's successfully gapped: 223 Length of query: 790 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 768 Effective length of database: 18,508,616,841 Effective search space: 14214617733888 Effective search space used: 14214617733888 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
