ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf99m13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK070777:Os03g0731100 | 171 | 3e-43 | 2 | AK059037:Os12g0189400 | 35 | 0.046 | 3 | AK119653:Os02g0115900 | 29 | 3.3 | 4 | AK066006:Os02g0115900 | 29 | 3.3 | 5 | AK065743:Os02g0115900 | 29 | 3.3 | 6 | AF006825:Os02g0115900 | 29 | 3.3 | 7 | AK099892:Os02g0106900 | 28 | 4.3 | 8 | AK066181:Os07g0477500 | 28 | 5.6 |
|---|
>AK070777:Os03g0731100 | Length = 124 Score = 171 bits (434), Expect = 3e-43 Identities = 83/124 (66%), Positives = 97/124 (78%) Frame = +2 Query: 53 GKLLDTIRRPVAAASSLHQSAANHLQPLLSLAQRNGVNRRCILTLLXXXXXXXXXXXXRK 232 GKL+DTIRRP AAS+ H+SA HLQPL LAQRNG++RR +LT L RK Sbjct: 1 GKLVDTIRRPFTAASTFHRSATRHLQPLAMLAQRNGISRRGLLTFLTSTAAIPEAGESRK 60 Query: 233 ALLQDYVKRSKENKEKNDKERLDDFYKRNYKDYFGFMEGSVREKPAEELTESEKGILAWL 412 ALLQ+Y+K+SKENKEKNDKERLDD+YKRNY+DYFG +EG R+K +ELTESEKGIL WL Sbjct: 61 ALLQEYLKKSKENKEKNDKERLDDYYKRNYRDYFGLIEGPARQKNEDELTESEKGILEWL 120 Query: 413 DKNK 424 DKNK Sbjct: 121 DKNK 124
>AK059037:Os12g0189400 | Length = 149 Score = 35.0 bits (79), Expect = 0.046 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 7/108 (6%) Frame = +2 Query: 92 ASSLHQSAANHLQPLLSLA----QRNGVNRRCILTLLXXXXXXXXXXXXRKALLQDYVKR 259 A+++ QSAA+ + + +A + G RR L L + + +Y+++ Sbjct: 14 AAAVPQSAASPVPKRVHVAVPPKEEQGGGRRAALLGLAAVFAATAAGQAKAGVFDEYLEK 73 Query: 260 SKENKEKNDKERLDDF---YKRNYKDYFGFMEGSVREKPAEELTESEK 394 SK NKE NDK+RL + R Y FG + ++L + +K Sbjct: 74 SKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKK 121
>AK119653:Os02g0115900 | Length = 665 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +2 Query: 242 QDYVKRSKENKEKNDKERLDDFYKRNYKDYFGFME---GSVREKPAEELTESEKGILAWL 412 +++ + K+ KE+ D + Y N K+ G + + + E++ E+ K L WL Sbjct: 552 EEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLESEEKEKVEEALKEALEWL 611 Query: 413 DKNK*LASVEHD 448 D+N+ E++ Sbjct: 612 DENQTAEKEEYE 623
>AK066006:Os02g0115900 | Length = 445 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +2 Query: 242 QDYVKRSKENKEKNDKERLDDFYKRNYKDYFGFME---GSVREKPAEELTESEKGILAWL 412 +++ + K+ KE+ D + Y N K+ G + + + E++ E+ K L WL Sbjct: 332 EEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLESEEKEKVEEALKEALEWL 391 Query: 413 DKNK*LASVEHD 448 D+N+ E++ Sbjct: 392 DENQTAEKEEYE 403
>AK065743:Os02g0115900 | Length = 665 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +2 Query: 242 QDYVKRSKENKEKNDKERLDDFYKRNYKDYFGFME---GSVREKPAEELTESEKGILAWL 412 +++ + K+ KE+ D + Y N K+ G + + + E++ E+ K L WL Sbjct: 552 EEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLESEEKEKVEEALKEALEWL 611 Query: 413 DKNK*LASVEHD 448 D+N+ E++ Sbjct: 612 DENQTAEKEEYE 623
>AF006825:Os02g0115900 | Length = 665 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = +2 Query: 242 QDYVKRSKENKEKNDKERLDDFYKRNYKDYFGFME---GSVREKPAEELTESEKGILAWL 412 +++ + K+ KE+ D + Y N K+ G + + + E++ E+ K L WL Sbjct: 552 EEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLESEEKEKVEEALKEALEWL 611 Query: 413 DKNK*LASVEHD 448 D+N+ E++ Sbjct: 612 DENQTAEKEEYE 623
>AK099892:Os02g0106900 | Length = 406 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -2 Query: 116 PLIDEEMKLLRPAF*LCPAAYLEAEPWDM 30 P +E+ LLRPA L P+ E EPW + Sbjct: 66 PPPQQELPLLRPAAKLVPSTKEEGEPWKL 94
>AK066181:Os07g0477500 | Length = 794 Score = 28.1 bits (61), Expect = 5.6 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = +2 Query: 260 SKENKEKNDKERLDDFYKRNYKDYFGFMEGSVREKPAEE----LTESEKGILAWLDKNK* 427 S E +E ++R + + R KD EG+ REK + + TE E IL + Sbjct: 274 SVERRENQREDRDAEKWDRERKDSQKDKEGNDREKDSAKESSVATEKENAILEKTASDGA 333 Query: 428 LASVEHDSTTPTTK 469 + S EH++ T K Sbjct: 334 VKSAEHENKTVEQK 347 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,075,647 Number of extensions: 301632 Number of successful extensions: 849 Number of sequences better than 10.0: 8 Number of HSP's gapped: 846 Number of HSP's successfully gapped: 8 Length of query: 224 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 127 Effective length of database: 11,515,878 Effective search space: 1462516506 Effective search space used: 1462516506 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
