Clone Name | FLbaf99m13 |
---|---|
Clone Library Name | barley_pub |
>P13521:SCG2_HUMAN Secretogranin-2 precursor - Homo sapiens (Human)| Length = 617 Score = 33.1 bits (74), Expect = 0.97 Identities = 19/59 (32%), Positives = 36/59 (61%) Frame = +2 Query: 242 QDYVKRSKENKEKNDKERLDDFYKRNYKDYFGFMEGSVREKPAEELTESEKGILAWLDK 418 Q+ V+ SKEN EKN E+++D KR+ G E +R++ ++L++ ++A+L + Sbjct: 262 QEEVRDSKENIEKN--EQINDEMKRS--GQLGIQEEDLRKESKDQLSDDVSKVIAYLKR 316
>P53623:HSP72_PICAN Heat shock protein 70 2 - Pichia angusta (Yeast) (Hansenula| polymorpha) Length = 643 Score = 31.6 bits (70), Expect = 2.8 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 9/79 (11%) Frame = +2 Query: 239 LQDYVKRSKENKEKNDKERLDDFYKRNYKDYFGFMEGSVREKPAEELTESEK-------- 394 ++ V +++ KE+++KE K + Y ++ + EK EE E+ K Sbjct: 513 IERMVSEAEKYKEEDEKEAKRIAAKNGLESYAYSLKQTTSEKQFEEKVEASKREAFTKAC 572 Query: 395 -GILAWLDKNK*LASVEHD 448 +AWLD+N+ + E+D Sbjct: 573 DDTIAWLDENQTATAEEYD 591
>Q60301:Y3402_METJA Uncharacterized adenine-specific methylase MJECS02 - Methanococcus| jannaschii Length = 1181 Score = 31.2 bits (69), Expect = 3.7 Identities = 15/56 (26%), Positives = 31/56 (55%) Frame = +2 Query: 230 KALLQDYVKRSKENKEKNDKERLDDFYKRNYKDYFGFMEGSVREKPAEELTESEKG 397 K +++Y++ + +N + +E ++FYK K FGF + +K + +E +KG Sbjct: 211 KEYIEEYIEVATKNIKHKKEEITNEFYKEFVKLVFGFEDVKDVKKKDKSSSEKDKG 266
>P49107:PSAN_ARATH Photosystem I reaction center subunit N, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 171 Score = 30.8 bits (68), Expect = 4.8 Identities = 12/21 (57%), Positives = 18/21 (85%) Frame = +2 Query: 236 LLQDYVKRSKENKEKNDKERL 298 ++ +Y++RSK NKE NDK+RL Sbjct: 88 VIDEYLERSKTNKELNDKKRL 108
>Q8TDU6:GPBAR_HUMAN G-protein coupled bile acid receptor 1 - Homo sapiens (Human)| Length = 330 Score = 30.8 bits (68), Expect = 4.8 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = -3 Query: 151 LSQAEQRLQMICR*LMKR*SCCDRPSDCVQQLTWR 47 L+ A ++LQ ICR ++R C D PS + LTWR Sbjct: 189 LATAHRQLQDICR--LERAVCRDEPSALARALTWR 221
>O65107:PSAN_MAIZE Photosystem I reaction center subunit N, chloroplast precursor -| Zea mays (Maize) Length = 112 Score = 30.4 bits (67), Expect = 6.3 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = +2 Query: 227 RKALLQDYVKRSKENKEKNDKERLDDF---YKRNYKDYFGFMEGSVREKPAEELTESEK 394 + + +Y+++SK NKE NDK+RL + R Y FG + ++L + +K Sbjct: 26 KATIFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKK 84 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 95,842,422 Number of extensions: 1729721 Number of successful extensions: 5746 Number of sequences better than 10.0: 6 Number of HSP's gapped: 5737 Number of HSP's successfully gapped: 6 Length of query: 224 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 115 Effective length of database: 70,788,284 Effective search space: 8140652660 Effective search space used: 8140652660 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)