ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf99m06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q7DM58:MRP4_ARATH Multidrug resistance-associated protein 4 - Ar... 35 0.36
2Q7SXX7:F125A_DANRE Protein FAM125A - Danio rerio (Zebrafish) (Br... 34 0.80
3P80205:OTX1_MOUSE Homeobox protein OTX1 - Mus musculus (Mouse) 32 2.3
4Q5GXU9:IF2_XANOR Translation initiation factor IF-2 - Xanthomona... 32 2.3
5Q9CC57:HISX_MYCLE Histidinol dehydrogenase - Mycobacterium leprae 32 3.0
6P32242:OTX1_HUMAN Homeobox protein OTX1 - Homo sapiens (Human) 32 4.0
7O00303:IF35_HUMAN Eukaryotic translation initiation factor 3 sub... 32 4.0
8O65091:NLTP4_ORYSJ Nonspecific lipid-transfer protein 4 precurso... 31 5.2
9Q9P202:WHRN_HUMAN Whirlin - Homo sapiens (Human) 31 6.8
10Q09550:YQU3_CAEEL Uncharacterized protein F26C11.3 precursor - C... 30 8.8
11Q5UNV2:YL688_MIMIV Uncharacterized protein L688 - Mimivirus 30 8.8
12Q6C3K2:ALG1_YARLI Chitobiosyldiphosphodolichol beta-mannosyltran... 30 8.8

>Q7DM58:MRP4_ARATH Multidrug resistance-associated protein 4 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 1516
 Score = 35.0 bits (79), Expect = 0.36
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 184  VAGGLRYTQFVPSYSTDLEL*ELATKPMVTATEPRKPRTVHTSTASFSMST 32
            V+ GL + + V ++ T +EL E        AT PR P + H S+   SM +
Sbjct: 852  VSSGLDFGELVAAHETSMELVEAGADSAAVATSPRTPTSPHASSPRTSMES 902



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>Q7SXX7:F125A_DANRE Protein FAM125A - Danio rerio (Zebrafish) (Brachydanio rerio)|
          Length = 275

 Score = 33.9 bits (76), Expect = 0.80
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
 Frame = -2

Query: 691 VASEICSAS*SAPAVGPVVRSCPVPLAPPATSRQNS----PSGGVCDGAAVSS-RT*DAI 527
           V+ +I S S   PA    ++    P APP  SR+ S    P+GGVCD +  S     D +
Sbjct: 159 VSLDIRSLSLDGPAPPQPLKPSNPPEAPPKVSRRRSKLDLPAGGVCDSSVCSGISAMDGV 218

Query: 526 PSTT-AMSEERDAVGKLPTVPGSLHAYDVGVLEIGASSRELSVTPTMNIAIATIVR 362
           P T     E R +  K+  +  S    D+ +  +     E + T T+    A  +R
Sbjct: 219 PFTLHPKFESRSSSTKVSVITLS----DIRIKSVQDIENEYNYTFTVEELAAKRIR 270



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>P80205:OTX1_MOUSE Homeobox protein OTX1 - Mus musculus (Mouse)|
          Length = 355

 Score = 32.3 bits (72), Expect = 2.3
 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -2

Query: 727 NPTLSLLQIQTAVASEICSAS*SAPAVGPVVRSCPVPLAPP--ATSRQNSPSGGVCDGAA 554
           NP  +   + T  AS I S +  +P   P   S P PLA P  A+  Q S + G    AA
Sbjct: 160 NPVAAASSLSTPTASSIWSPASISPGSAPTSVSVPEPLAAPSNASCMQRSVAAGAATAAA 219



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>Q5GXU9:IF2_XANOR Translation initiation factor IF-2 - Xanthomonas oryzae pv. oryzae|
          Length = 906

 Score = 32.3 bits (72), Expect = 2.3
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
 Frame = -2

Query: 688 ASEICSAS*SAPAVGPVVRSCPVPLAPPATSRQNSPSGGV----CDGAAVSSRT*DAIPS 521
           A+E  +A+ SAPA  PV  +     A PA    +SPS         GA+ +SR     PS
Sbjct: 175 AAEEAAAAASAPAPAPVAAAPTPSAAAPAARAPSSPSSAPRPSRPGGASPASR-----PS 229

Query: 520 TTAMSEERDAVGKLPTVPGSLHAYDVGVLEIGASSR 413
           T A  ++R+   K  T  GS H    GV +  A+ R
Sbjct: 230 TPARPDDRNNAAKHKT-RGS-HVMVAGVEDDDATKR 263



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>Q9CC57:HISX_MYCLE Histidinol dehydrogenase - Mycobacterium leprae|
          Length = 449

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +3

Query: 564 SHTPPDGLFCLEVAGGASGTGQLRTTGPTAGADQEA 671
           S TPP  L C+++ G      QLR T P  GAD EA
Sbjct: 2   SITPPFLLACIDLRGAELTATQLRATLPRGGADVEA 37



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>P32242:OTX1_HUMAN Homeobox protein OTX1 - Homo sapiens (Human)|
          Length = 354

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -2

Query: 727 NPTLSLLQIQTAVASEICSAS*SAPAVGPVVRSCPVPLAPPATS--RQNSPSGGVCDGAA 554
           NP  +   + T  AS I S +  +P   P   S P PLA P+ +   Q S + G    AA
Sbjct: 160 NPVAAASSLSTPAASSIWSPASISPGSAPASVSVPEPLAAPSNTSCMQRSVAAGAATAAA 219



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>O00303:IF35_HUMAN Eukaryotic translation initiation factor 3 subunit 5 - Homo sapiens|
           (Human)
          Length = 357

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 23/66 (34%), Positives = 29/66 (43%)
 Frame = -2

Query: 661 SAPAVGPVVRSCPVPLAPPATSRQNSPSGGVCDGAAVSSRT*DAIPSTTAMSEERDAVGK 482
           S PA  P   + PVP A PA+S          D AA ++ T  A P  T  S +  A   
Sbjct: 25  SVPAPTPAPAAAPVPAAAPASS---------SDPAAAAAAT--AAPGQTPASAQAPAQTP 73

Query: 481 LPTVPG 464
            P +PG
Sbjct: 74  APALPG 79



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>O65091:NLTP4_ORYSJ Nonspecific lipid-transfer protein 4 precursor - Oryza sativa|
           subsp. japonica (Rice)
          Length = 119

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
 Frame = -2

Query: 691 VASEICSAS*SAPAVGPVVRSCPVPLAPPATSRQNSPSGGVCDGA----AVSSRT*DAIP 524
           VA  + + + SA   G VV S   P    AT R ++P+GG CDG     + ++ T D   
Sbjct: 16  VALLLAAPAASAVTCGQVV-SMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQT 74

Query: 523 STTAMSEERDAVGKL 479
           +   + ++  A+G L
Sbjct: 75  TCACLKQQTSAMGGL 89



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>Q9P202:WHRN_HUMAN Whirlin - Homo sapiens (Human)|
          Length = 907

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 23/81 (28%), Positives = 34/81 (41%)
 Frame = +3

Query: 393  VGVTESSREEAPISKTPTSYACREPGTVGSFPTASLSSLIAVVLGIASYVLLETAAPSHT 572
            V     S +E P ++ PT  A + PG +    T       A  LGIA    +E  A +  
Sbjct: 783  VSTKSRSSKELPRNERPTDGANKPPGLLEPTSTLVRVKKSAATLGIA----IEGGANTRQ 838

Query: 573  PPDGLFCLEVAGGASGTGQLR 635
            P   +  ++  G A   GQL+
Sbjct: 839  PLPRIVTIQRGGSAHNCGQLK 859



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>Q09550:YQU3_CAEEL Uncharacterized protein F26C11.3 precursor - Caenorhabditis elegans|
          Length = 1317

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
 Frame = -2

Query: 727  NPTLSLLQIQTAVASEICSAS*SAPAVGPVVRSCPVPLAPPATSRQNSPSGGVC----DG 560
            NP+    + +T   ++ C  + S  +  P ++    P   P T+  N P+GG       G
Sbjct: 646  NPSTKETRTETTTDADGCKKTSSTSSSTPSLKHSTTPTPTPGTTTYNWPTGGTTRMLPSG 705

Query: 559  AAVSSRT*DAIPSTTAMSEE---RDAVGKLPTVPGSLHAYDVGVLEIGASSRELSVTPT 392
              + S +  A P+ T +  +     +  K  T   +          I +SS + S+TPT
Sbjct: 706  EIILSESLIAYPNCTTVLMQLIYTPSTNKTRTETTTDTEGCKKTSTISSSSSKFSITPT 764



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>Q5UNV2:YL688_MIMIV Uncharacterized protein L688 - Mimivirus|
          Length = 236

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = -2

Query: 682 EICSAS*SAPAVGPVVRSCPVPL------APPATSRQNSPSGGVCDGAAVSSRT*DAIPS 521
           ++C++S   P+  P+   CPV +      AP AT+ ++SP+G       V S    +IPS
Sbjct: 53  QVCTSSQPCPSPCPIPVPCPVTIVEYITTAPTATTIESSPTGMALTPIPVGS---TSIPS 109

Query: 520 TT 515
            T
Sbjct: 110 GT 111



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>Q6C3K2:ALG1_YARLI Chitobiosyldiphosphodolichol beta-mannosyltransferase - Yarrowia|
           lipolytica (Candida lipolytica)
          Length = 463

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 613 RAVRGSFGLLDRRPVPIRKRSISHWPPRFEFEGVTMLGSF 732
           +A+R +FG+  RR VP+  R   H+ P  E E + +L  F
Sbjct: 210 QAMRKTFGMSGRRIVPLHDRPAFHFKPLSESEKLDVLRDF 249


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 103,080,919
Number of extensions: 2101517
Number of successful extensions: 7589
Number of sequences better than 10.0: 12
Number of HSP's gapped: 7574
Number of HSP's successfully gapped: 12
Length of query: 273
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 162
Effective length of database: 70,239,694
Effective search space: 11378830428
Effective search space used: 11378830428
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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