Clone Name | FLbaf99m06 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_511157.2| PREDICTED: Pan troglodytes similar to BDG-29 (LOC454299), mRNA Length = 7449 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Plus Query: 294 cggccggcgcctcctccgccgtc 316 ||||||||||||||||||||||| Sbjct: 428 cggccggcgcctcctccgccgtc 450
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 68 ggtcctgggcttcctcggctcgg 90 ||||||||||||||||||||||| Sbjct: 5745129 ggtcctgggcttcctcggctcgg 5745107
>gb|AC092720.4| Homo sapiens chromosome 16 clone RP11-482M8, complete sequence Length = 169214 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 294 cggccggcgcctcctccgccgtc 316 ||||||||||||||||||||||| Sbjct: 23390 cggccggcgcctcctccgccgtc 23368
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 tcatcgccgtcgtgctcgggatcgcgt 534 ||||||||||||||||||| ||||||| Sbjct: 2086669 tcatcgccgtcgtgctcggcatcgcgt 2086695
>gb|CP000460.1| Burkholderia cenocepacia HI2424 chromosome 3, complete genome Length = 1055417 Score = 44.1 bits (22), Expect = 0.78 Identities = 28/30 (93%) Strand = Plus / Plus Query: 553 cggccgcgccgtcgcacacgccgcccgacg 582 ||||||||| ||||| |||||||||||||| Sbjct: 467207 cggccgcgcggtcgcgcacgccgcccgacg 467236
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 44.1 bits (22), Expect = 0.78 Identities = 28/30 (93%) Strand = Plus / Minus Query: 553 cggccgcgccgtcgcacacgccgcccgacg 582 ||||||||| ||||| |||||||||||||| Sbjct: 1716792 cggccgcgcggtcgcgcacgccgcccgacg 1716763
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Minus Query: 287 gcggcgccggccggcgcctcct 308 |||||||||||||||||||||| Sbjct: 3523211 gcggcgccggccggcgcctcct 3523190
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 380 ggcgatgttcatcgtcggcgtgacggaga 408 |||| ||||| |||||||||||||||||| Sbjct: 483653 ggcgctgttcttcgtcggcgtgacggaga 483625
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 caagcggcgcaggctcggcat 337 ||||||||||||||||||||| Sbjct: 4681912 caagcggcgcaggctcggcat 4681892
>emb|CT025731.18| Mouse DNA sequence from clone RP24-85N6 on chromosome 17, complete sequence Length = 226653 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catcatcctctccatcttctc 355 ||||||||||||||||||||| Sbjct: 221447 catcatcctctccatcttctc 221467
>gb|AY658213.1| Synthetic construct Peudomonas aeruginosa clone FLH044482.01F PA4185 gene, partial cds Length = 729 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 caagcggcgcaggctcggcat 337 ||||||||||||||||||||| Sbjct: 492 caagcggcgcaggctcggcat 472
>gb|AC162923.2| Mus musculus BAC clone RP23-304O17 from chromosome 17, complete sequence Length = 192669 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 catcatcctctccatcttctc 355 ||||||||||||||||||||| Sbjct: 124256 catcatcctctccatcttctc 124276
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 aagcggcgcaggctcggcatc 338 ||||||||||||||||||||| Sbjct: 4578454 aagcggcgcaggctcggcatc 4578474
>emb|CR848405.2| Xenopus tropicalis finished cDNA, clone TNeu072l04 Length = 2076 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 gcatcatcctctccatcttct 354 ||||||||||||||||||||| Sbjct: 963 gcatcatcctctccatcttct 943
>gb|AC162305.5| Mus musculus BAC clone RP23-470G3 from chromosome 16, complete sequence Length = 208504 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 gtcctgggcttcctcggctcg 89 ||||||||||||||||||||| Sbjct: 152336 gtcctgggcttcctcggctcg 152356
>gb|AC145550.3| Mus musculus BAC clone RP23-50A18 from 16, complete sequence Length = 146370 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 gtcctgggcttcctcggctcg 89 ||||||||||||||||||||| Sbjct: 107626 gtcctgggcttcctcggctcg 107606 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 111,714,034 Number of extensions: 6970713 Number of successful extensions: 154080 Number of sequences better than 10.0: 16 Number of HSP's gapped: 154080 Number of HSP's successfully gapped: 16 Length of query: 821 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 799 Effective length of database: 18,508,616,841 Effective search space: 14788384855959 Effective search space used: 14788384855959 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)