ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf97g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK099166:Os01g0895100 30 0.64
2AK067698:Os01g0895100 30 0.64
3AK058611:Os01g0895100 30 0.64
4AK110249: 27 4.2
5Os07g0599100:Os07g0599100 27 5.4
6AK109456:Os05g0220900 26 7.1
7AK109172:Os05g0220900 26 7.1 
>AK099166:Os01g0895100 |
          Length = 317
 Score = 29.6 bits (65), Expect = 0.64
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 6   DIERELNELREKANDY 53
           +IE ELNELR+KAN+Y
Sbjct: 302 EIENELNELRKKANEY 317
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>AK067698:Os01g0895100 |
          Length = 317

 Score = 29.6 bits (65), Expect = 0.64
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 6   DIERELNELREKANDY 53
           +IE ELNELR+KAN+Y
Sbjct: 302 EIENELNELRKKANEY 317
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>AK058611:Os01g0895100 |
          Length = 317

 Score = 29.6 bits (65), Expect = 0.64
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 6   DIERELNELREKANDY 53
           +IE ELNELR+KAN+Y
Sbjct: 302 EIENELNELRKKANEY 317
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>AK110249: |
          Length = 980

 Score = 26.9 bits (58), Expect = 4.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 161 RFKRALDKSAGYTLFWGSLTEEISSSPVHGHAL 63
           R   ALD+S G  + WG   E++  SP HG+ L
Sbjct: 260 RLNWALDRSKGMMIAWGLNGEDL--SPDHGYPL 290
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>Os07g0599100:Os07g0599100 |
          Length = 1477

 Score = 26.6 bits (57), Expect = 5.4
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 373  GSIFSYMLWHQPNGTRYTTVNNLCSR---LSSMNIRDL 269
            GS+ S +LW       +  VN+L S      SMN+R+L
Sbjct: 1276 GSLRSLLLWRPDGAMNFNIVNSLSSPPIFTKSMNLREL 1313
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>AK109456:Os05g0220900 |
          Length = 351

 Score = 26.2 bits (56), Expect = 7.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 57 SNNRWPSPAAHLTPSRY 7
          +++RWP+P   +TPSR+
Sbjct: 19 TDHRWPAPRPTITPSRF 35
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>AK109172:Os05g0220900 |
          Length = 166

 Score = 26.2 bits (56), Expect = 7.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 57 SNNRWPSPAAHLTPSRY 7
          +++RWP+P   +TPSR+
Sbjct: 19 TDHRWPAPRPTITPSRF 35


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 10,858,802
Number of extensions: 230532
Number of successful extensions: 501
Number of sequences better than 10.0: 7
Number of HSP's gapped: 501
Number of HSP's successfully gapped: 7
Length of query: 130
Length of database: 15,399,855
Length adjustment: 89
Effective length of query: 41
Effective length of database: 11,836,206
Effective search space: 485284446
Effective search space used: 485284446
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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