Clone Name | FLbaf99l08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY736118.1| Triticum aestivum 20S proteasome beta 4 subunit mRNA, complete cds Length = 654 Score = 1118 bits (564), Expect = 0.0 Identities = 627/648 (96%) Strand = Plus / Plus Query: 115 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 174 ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 1 atggagtgcgtcatcggcgtggtgggcagcgacttcgcggtggtggcggcggacacgtcc 60 Query: 175 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 120 Query: 235 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 294 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaagctcatgggcgcctccggggagcccggcgaccgcgtgcagttcaccgagttcatc 180 Query: 295 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 240 Query: 355 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 414 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 241 gccaacttcacccgcggcgagctcgccaccgccctgcgcaagaatccctactccgtaaac 300 Query: 415 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 474 || ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 301 atcatacttgcagggtttgataaagacgctggtgcatcgatgtactacattgactacatc 360 Query: 475 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 534 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 361 gcgacgctccacaagatcgacaagggagcattcgggtacgggtcgtacttctgtctgtcg 420 Query: 535 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 594 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ctgatggacaagttgtaccgccctgacatgactgtcgaggaagcggtagaccttgttgac 480 Query: 595 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 654 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 540 Query: 655 attgtggacaaggatggcgccagggactatgctaggcgtgagatcggaggtgacagtcct 714 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 541 atcgtggacaaggatggcgccagggactatgctaggcgtgagataggaggtgacagtcct 600 Query: 715 gcagccgcaaccacagccgcaacagtagcaacaactgcctgaggtgat 762 |||| | ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 601 gcagtcacaaccgcaaccgcaacaatagcaacaactgcctgaggtgat 648
>ref|NM_001057511.1| Oryza sativa (japonica cultivar-group) Os03g0695600 (Os03g0695600) mRNA, complete cds Length = 968 Score = 452 bits (228), Expect = e-123 Identities = 438/508 (86%) Strand = Plus / Plus Query: 95 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 154 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 112 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 171 Query: 155 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 214 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 172 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 231 Query: 215 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 274 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 232 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 291 Query: 275 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 334 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 292 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 351 Query: 335 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 394 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 352 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 411 Query: 395 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 454 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 412 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 471 Query: 455 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 514 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 472 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 531 Query: 515 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 574 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 532 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 591 Query: 575 aagcggtagaccttgttgacaagtgcat 602 |||| || || ||||||||||||||||| Sbjct: 592 aagctgttgatcttgttgacaagtgcat 619
>dbj|AK105847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-G05, full insert sequence Length = 1250 Score = 452 bits (228), Expect = e-123 Identities = 438/508 (86%) Strand = Plus / Plus Query: 95 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 154 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 470 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 529 Query: 155 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 214 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 530 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 589 Query: 215 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 274 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 590 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 649 Query: 275 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 334 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 650 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 709 Query: 335 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 394 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 710 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 769 Query: 395 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 454 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 770 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 829 Query: 455 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 514 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 830 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 889 Query: 515 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 574 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 890 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 949 Query: 575 aagcggtagaccttgttgacaagtgcat 602 |||| || || ||||||||||||||||| Sbjct: 950 aagctgttgatcttgttgacaagtgcat 977
>dbj|AK099128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C17, full insert sequence Length = 926 Score = 452 bits (228), Expect = e-123 Identities = 438/508 (86%) Strand = Plus / Plus Query: 95 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 154 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 73 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 132 Query: 155 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 214 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 133 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 192 Query: 215 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 274 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 193 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 252 Query: 275 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 334 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 253 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 312 Query: 335 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 394 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 313 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 372 Query: 395 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 454 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 373 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 432 Query: 455 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 514 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 433 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 492 Query: 515 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 574 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 493 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 552 Query: 575 aagcggtagaccttgttgacaagtgcat 602 |||| || || ||||||||||||||||| Sbjct: 553 aagctgttgatcttgttgacaagtgcat 580
>dbj|AK061228.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A02, full insert sequence Length = 968 Score = 452 bits (228), Expect = e-123 Identities = 438/508 (86%) Strand = Plus / Plus Query: 95 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 154 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 112 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 171 Query: 155 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 214 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 172 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 231 Query: 215 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 274 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 232 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 291 Query: 275 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 334 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 292 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 351 Query: 335 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 394 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 352 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 411 Query: 395 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 454 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 412 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 471 Query: 455 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 514 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 472 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 531 Query: 515 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 574 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 532 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 591 Query: 575 aagcggtagaccttgttgacaagtgcat 602 |||| || || ||||||||||||||||| Sbjct: 592 aagctgttgatcttgttgacaagtgcat 619
>dbj|AB026566.1| Oryza sativa (japonica cultivar-group) OsPBD1 mRNA for beta 4 subunit of 20S proteasome, complete cds Length = 882 Score = 444 bits (224), Expect = e-121 Identities = 437/508 (86%) Strand = Plus / Plus Query: 95 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 154 |||| |||||| || ||| |||||||||||| ||||| || |||||||||||| |||||| Sbjct: 101 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacatcgcgg 160 Query: 155 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 214 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 161 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 220 Query: 215 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 274 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 221 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 280 Query: 275 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 334 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 281 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 340 Query: 335 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 394 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 341 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 400 Query: 395 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 454 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 401 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 460 Query: 455 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 514 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 461 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 520 Query: 515 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 574 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 521 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 580 Query: 575 aagcggtagaccttgttgacaagtgcat 602 |||| || || ||||||||||||||||| Sbjct: 581 aagctgttgatcttgttgacaagtgcat 608
>emb|CT831628.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI029E12, full insert sequence Length = 863 Score = 442 bits (223), Expect = e-120 Identities = 433/503 (86%) Strand = Plus / Plus Query: 100 gcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtg 159 |||||| || ||| |||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 108 gcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcggtggtg 167 Query: 160 gcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggacaagatc 219 || || ||||| ||||| |||||||||||||| ||||||||||| |||||||||||| | Sbjct: 168 gccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggacaaggtg 227 Query: 220 atgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcag 279 ||| | |||| | ||||||||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 228 atggtgctcggcagccacaagctgatgggcgcgtccggagagcccggcgaccgggtgcag 287 Query: 280 ttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgccgctc 339 ||||||||||||||||||||||| |||||||| || ||||||||||||||||| |||||| Sbjct: 288 ttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcccgctc 347 Query: 340 agcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgcaagaat 399 |||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 348 agcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcggaagaat 407 Query: 400 ccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcgatgtac 459 || |||| ||| ||| | | ||||| || | |||| |||| ||||| || |||| Sbjct: 408 ccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctttgtat 467 Query: 460 tacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacgggtcg 519 ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| || || Sbjct: 468 tacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatggctcc 527 Query: 520 tacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgaggaagcg 579 ||||||||| | ||||||||||||||||| || | || |||||| | ||||||||||| Sbjct: 528 tacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgaggaagct 587 Query: 580 gtagaccttgttgacaagtgcat 602 || || ||||||||||||||||| Sbjct: 588 gttgatcttgttgacaagtgcat 610
>gb|DQ245833.1| Zea mays clone 20712 mRNA sequence Length = 938 Score = 383 bits (193), Expect = e-103 Identities = 484/581 (83%) Strand = Plus / Plus Query: 115 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 174 ||||||||||| | || ||||| ||||||||||||| | |||||||||| ||||| || Sbjct: 86 atggagtgcgtattgggcgtggttggccgcgacttcgtgctggtggcggccgacacctcc 145 Query: 175 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 234 ||||||||||| || |||||||||||||| |||||||||||| | ||| | |||||||| Sbjct: 146 gccgtgcagagtattctcgtccacaagaccgacgaggacaaggtgatggtgctcgactcg 205 Query: 235 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 294 || ||||| |||||||| || || ||||| || || || ||||| || || |||||||| Sbjct: 206 caaaagctgatgggcgcttcaggggagcctggtgatcgggtgcaatttacggagttcata 265 Query: 295 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 354 ||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| || Sbjct: 266 cagaagaacctccacctgtaccagttccggaacaccatcccgctctcaaccgccgccgcc 325 Query: 355 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 414 ||||||||||| |||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 326 gccaacttcacacgcggcgaactcgccacagcccttcgcaagaatccatatatggtcaat 385 Query: 415 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 474 ||||| |||| || | |||||| |||| ||||| || | |||||||| |||||||| Sbjct: 386 attattcttggtggttatgataaggatgttggtgcttccctctactacatcgactacatt 445 Query: 475 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 534 || || | |||||||| ||||| || || ||||||||||| || |||||||||||||| Sbjct: 446 gcaaccttgcacaagattgacaaaggtgcttttgggtacggatcatacttctgtttgtct 505 Query: 535 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 594 ||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 506 ctgatggacaagttgtaccacccggacatgactgttgaggaagcagtagatcttgttgac 565 Query: 595 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 654 ||||||||||||||||| | || || |||| |||||||||||||| || | |||||| Sbjct: 566 aagtgcatcaaggagattcggctgcgattggttgtcgcgcctcagaactttgttatcaag 625 Query: 655 attgtggacaaggatggcgccagggactatgctaggcgtga 695 ||||| |||||||| || || ||||| || || |||||||| Sbjct: 626 attgtcgacaaggacggggcgagggagtacgccaggcgtga 666
>gb|AY746978.1| Zea mays putative beta 4 proteasome subunit mRNA, complete cds Length = 931 Score = 383 bits (193), Expect = e-103 Identities = 484/581 (83%) Strand = Plus / Plus Query: 115 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 174 ||||||||||| | || ||||| ||||||||||||||| |||||||||| ||||| || Sbjct: 90 atggagtgcgtattgggcgtggttggccgcgacttcgcgctggtggcggccgacacctcc 149 Query: 175 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 234 ||||||||||| || |||||||||||||| |||||||||||| | ||| | |||||||| Sbjct: 150 gccgtgcagagtattctcgtccacaagaccgacgaggacaaggtgatggtgctcgactcg 209 Query: 235 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 294 || ||||| |||||||| || || ||||| || || || ||||| || || |||||||| Sbjct: 210 caaaagctgatgggcgcttcaggggagcctggtgatcgggtgcaatttacggagttcata 269 Query: 295 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 354 ||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| || Sbjct: 270 cagaagaacctccacctgtaccagttccggaacaccatcccgctctcaaccgccgccgcc 329 Query: 355 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 414 ||||||||||| |||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 330 gccaacttcacacgcggcgaactcgccacagcccttcgcaagaatccatatatggtcaat 389 Query: 415 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 474 ||||| |||| || | |||||| |||| ||||| || | |||||||| |||||||| Sbjct: 390 attattcttggtggttatgataaggatgttggtgcttccctctactacatcgactacatt 449 Query: 475 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 534 || || | ||||| || ||||| || || ||||||||||| || |||||||||||||| Sbjct: 450 gcaaccttgcacaaaattgacaaaggtgcttttgggtacggatcatacttctgtttgtct 509 Query: 535 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 594 || |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 510 cttatggacaagttgtaccacccggacatgactgttgaggaagcggtagacctcgttgat 569 Query: 595 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 654 |||||||| ||||||||| | || |||||||| || ||||| ||||| |||| |||||| Sbjct: 570 aagtgcattaaggagatccggctgcggctggttgtggcgccccagaacttcgtgatcaag 629 Query: 655 attgtggacaaggatggcgccagggactatgctaggcgtga 695 || || |||||||| || |||||||| || || |||||||| Sbjct: 630 atcgtcgacaaggacggggccagggagtacgcgaggcgtga 670
>gb|BT017976.1| Zea mays clone EL01N0524H02.c mRNA sequence Length = 922 Score = 379 bits (191), Expect = e-101 Identities = 458/547 (83%) Strand = Plus / Plus Query: 134 tggtcggccgcgacttcgcggtggtggcggcggacacgtcggccgtgcagagcatcctcg 193 |||| |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||| Sbjct: 172 tggttggccgcgacttcgcggtggtggcggccgacacctccgccgtgcagagtatcctcg 231 Query: 194 tccacaagacggacgaggacaagatcatgctcctcgactcccacaagctcatgggcgcct 253 |||||||||| ||||||||||| | ||| |||||||||| |||||||| ||||||| | Sbjct: 232 tccacaagactgacgaggacaaagtaatggtcctcgactcgcacaagctgttgggcgctt 291 Query: 254 ccggcgagcccggcgaccgcgtgcagttcaccgagttcatccagaagaacctccacctct 313 | || ||||| || ||||| |||||||| || |||||||| ||||||||||||||||| | Sbjct: 292 caggggagcctggtgaccgggtgcagtttacggagttcatacagaagaacctccacctgt 351 Query: 314 accagttccgcaacaacatgccgctcagcaccgccgccaccgccaacttcacccgcggcg 373 ||||||| ||||||| ||| ||||| |||||||| | ||||||||||| ||||||| Sbjct: 352 accagtttcgcaacaccatcccgctgtcaaccgccgctgctgccaacttcacacgcggcg 411 Query: 374 agctcgccaccgccctccgcaagaatccctactctgtaaacattatacttgcagggtttg 433 |||||||||| ||||| || |||||||| ||| || || |||| || | || | | Sbjct: 412 agctcgccacagcccttcgtaagaatccatacatggtcaatgttattctcggtggttacg 471 Query: 434 ataaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcg 493 |||| |||| ||||| ||| |||||||||| |||||||| ||||| | |||||||||| Sbjct: 472 ataaggatgttggtgcctcgctgtactacatcgactacattgcgaccttgcacaagatcg 531 Query: 494 acaagggagcatttgggtacgggtcgtacttctgtttgtcgctgatggacaagttgtacc 553 ||||||| || ||||||||||| ||||| ||||| |||| |||||||||||| |||||| Sbjct: 532 acaagggcgcttttgggtacggatcgtatttctgcctgtctctgatggacaagctgtacc 591 Query: 554 accctgacatgactgtcgaggaagcggtagaccttgttgacaagtgcatcaaggagatca 613 ||| |||||||| || |||||||||||||| || |||||||||||||| ||||||||| Sbjct: 592 gcccggacatgaccgttgaggaagcggtagatctcgttgacaagtgcattaaggagatcc 651 Query: 614 gactccggctggtcgtcgcgcctcagaatttcgccatcaagattgtggacaaggatggcg 673 | || |||||||| || ||||| ||||| |||| |||||||| || |||||||| || | Sbjct: 652 ggctgcggctggttgtggcgccccagaacttcgtgatcaagatcgtagacaaggacgggg 711 Query: 674 ccaggga 680 ||||||| Sbjct: 712 ccaggga 718
>gb|BT017738.1| Zea mays clone EL01N0449B05.c mRNA sequence Length = 944 Score = 375 bits (189), Expect = e-100 Identities = 483/581 (83%) Strand = Plus / Plus Query: 115 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 174 ||||||||||| | || ||||| ||||||||||||||| |||||||||| ||||| || Sbjct: 40 atggagtgcgtattgggcgtggttggccgcgacttcgcgctggtggcggccgacacctcc 99 Query: 175 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 234 ||||||||||| || |||||||||||||| |||||||||||| | ||| | |||||||| Sbjct: 100 gccgtgcagagtattctcgtccacaagaccgacgaggacaaggtgatggtgctcgactcg 159 Query: 235 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 294 || ||||| |||||||| || || ||||| || || || ||||| || || |||||||| Sbjct: 160 caaaagctgatgggcgcttcaggggagcctggtgatcgggtgcaatttacggagttcata 219 Query: 295 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 354 ||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| || Sbjct: 220 cagaagaacctccacctgtaccagttccggaacaccatcccgctctcaaccgccgccgcc 279 Query: 355 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 414 ||||||||||| |||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 280 gccaacttcacacgcggcgaactcgccacagcccttcgcaagaatccatatatggtcaat 339 Query: 415 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 474 ||||| |||| || | |||||| |||| ||||| || | |||||||| |||||||| Sbjct: 340 attattcttggtggttatgataaggatgttggtgcttccctctactacatcgactacatt 399 Query: 475 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 534 || || | ||||| || ||||| || || ||||||||||| || |||||||||||||| Sbjct: 400 gcaaccttgcacaaaattgacaaaggtgcttttgggtacggatcatacttctgtttgtct 459 Query: 535 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 594 || |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 460 cttatggacaagttgtaccacccggacatgactgttgaggaagcagtagatcttgttgac 519 Query: 595 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 654 ||||||||||||||||| | || || |||| |||||||||||||| || | |||||| Sbjct: 520 aagtgcatcaaggagattcggctgcgattggttgtcgcgcctcagaactttgttatcaag 579 Query: 655 attgtggacaaggatggcgccagggactatgctaggcgtga 695 ||||| |||||||| || || ||||| || || |||||||| Sbjct: 580 attgttgacaaggacggggcgagggagtacgccaggcgtga 620
>gb|AY104366.1| Zea mays PCO066933 mRNA sequence Length = 1048 Score = 375 bits (189), Expect = e-100 Identities = 483/581 (83%) Strand = Plus / Plus Query: 115 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 174 ||||||||||| | || ||||| ||||||||||||||| |||||||||| ||||| || Sbjct: 150 atggagtgcgtattgggcgtggttggccgcgacttcgcgctggtggcggccgacacctcc 209 Query: 175 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 234 ||||||||||| || |||||||||||||| |||||||||||| | ||| | |||||||| Sbjct: 210 gccgtgcagagtattctcgtccacaagaccgacgaggacaaggtgatggtgctcgactcg 269 Query: 235 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 294 || ||||| |||||||| || || ||||| || || || ||||| || || |||||||| Sbjct: 270 caaaagctgatgggcgcttcaggggagcctggtgatcgggtgcaatttacggagttcata 329 Query: 295 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 354 ||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| || Sbjct: 330 cagaagaacctccacctgtaccagttccggaacaccatcccgctctcaaccgccgccgcc 389 Query: 355 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 414 ||||||||||| |||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 390 gccaacttcacacgcggcgaactcgccacagcccttcgcaagaatccatatatggtcaat 449 Query: 415 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 474 ||||| |||| || | |||||| |||| ||||| || | |||||||| |||||||| Sbjct: 450 attattcttggtggttatgataaggatgttggtgcttccctctactacatcgactacatt 509 Query: 475 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 534 || || | ||||| || ||||| || || ||||||||||| || |||||||||||||| Sbjct: 510 gcaaccttgcacaaaattgacaaaggtgcttttgggtacggatcatacttctgtttgtct 569 Query: 535 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 594 || |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 570 cttatggacaagttgtaccacccggacatgactgttgaggaagcagtagatcttgttgac 629 Query: 595 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 654 ||||||||||||||||| | || || |||| |||||||||||||| || | |||||| Sbjct: 630 aagtgcatcaaggagattcggctgcgattggttgtcgcgcctcagaactttgttatcaag 689 Query: 655 attgtggacaaggatggcgccagggactatgctaggcgtga 695 ||||| |||||||| || || ||||| || || |||||||| Sbjct: 690 attgttgacaaggacggggcgagggagtacgccaggcgtga 730
>gb|BT017659.1| Zea mays clone EL01N0440E05.c mRNA sequence Length = 995 Score = 367 bits (185), Expect = 5e-98 Identities = 482/581 (82%) Strand = Plus / Plus Query: 115 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 174 ||||||||||| | || ||||| ||||||||||||||| |||||||||| ||||| || Sbjct: 77 atggagtgcgtattgggcgtggttggccgcgacttcgcgctggtggcggccgacacctcc 136 Query: 175 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 234 ||||||||||| || |||||||||||||| |||||||||||| | ||| | |||||||| Sbjct: 137 gccgtgcagagtattctcgtccacaagaccgacgaggacaaggtgatggtgctcgactcg 196 Query: 235 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 294 || ||||| |||||||| || || ||||| || || || ||||| || || |||||||| Sbjct: 197 caaaagctgatgggcgcttcaggggagcctggtgatcgggtgcaatttacggagttcata 256 Query: 295 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 354 ||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| || Sbjct: 257 cagaagaacctccacctgtaccagttccggaacaccatcccgctctcaaccgccgccgcc 316 Query: 355 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 414 ||||||||||| |||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 317 gccaacttcacacgcggcgaactcgccacagcccttcgcaagaatccatatatggtcaat 376 Query: 415 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 474 ||||| |||| || | |||||| |||| ||||| || | |||||||| |||||||| Sbjct: 377 attattcttggtggttatgataaggatgttggtgcttccctctactacatcgactacatt 436 Query: 475 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 534 || || | ||||| || ||||| || || ||||||||||| || |||||||||||| | Sbjct: 437 gcaaccttgcacaaaattgacaaaggtgcttttgggtacggatcatacttctgtttggct 496 Query: 535 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 594 || |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 497 cttatggacaagttgtaccacccggacatgactgttgaggaagcagtagatcttgttgac 556 Query: 595 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 654 ||||||||||||||||| | || || |||| |||||||||||||| || | |||||| Sbjct: 557 aagtgcatcaaggagattcggctgcgattggttgtcgcgcctcagaactttgttatcaag 616 Query: 655 attgtggacaaggatggcgccagggactatgctaggcgtga 695 ||||| |||||||| || || ||||| || || |||||||| Sbjct: 617 attgttgacaaggacggggcgagggagtacgccaggcgtga 657
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 190 bits (96), Expect = 6e-45 Identities = 111/116 (95%) Strand = Plus / Minus Query: 274 gtgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatg 333 ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 27660539 gtgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatc 27660480 Query: 334 ccgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccct 389 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 27660479 ccgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccct 27660424 Score = 178 bits (90), Expect = 2e-41 Identities = 156/178 (87%) Strand = Plus / Minus Query: 95 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 154 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 27660891 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 27660832 Query: 155 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 214 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 27660831 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 27660772 Query: 215 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccg 272 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| Sbjct: 27660771 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccg 27660714 Score = 119 bits (60), Expect = 2e-23 Identities = 126/148 (85%) Strand = Plus / Minus Query: 455 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 514 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 27659153 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 27659094 Query: 515 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 574 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 27659093 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 27659034 Query: 575 aagcggtagaccttgttgacaagtgcat 602 |||| || || ||||||||||||||||| Sbjct: 27659033 aagctgttgatcttgttgacaagtgcat 27659006
>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete sequence Length = 136982 Score = 190 bits (96), Expect = 6e-45 Identities = 111/116 (95%) Strand = Plus / Minus Query: 274 gtgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatg 333 ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 10913 gtgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatc 10854 Query: 334 ccgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccct 389 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10853 ccgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccct 10798 Score = 178 bits (90), Expect = 2e-41 Identities = 156/178 (87%) Strand = Plus / Minus Query: 95 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 154 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 11265 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 11206 Query: 155 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 214 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 11205 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 11146 Query: 215 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccg 272 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| Sbjct: 11145 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccg 11088 Score = 119 bits (60), Expect = 2e-23 Identities = 126/148 (85%) Strand = Plus / Minus Query: 455 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 514 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 9527 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 9468 Query: 515 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 574 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 9467 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 9408 Query: 575 aagcggtagaccttgttgacaagtgcat 602 |||| || || ||||||||||||||||| Sbjct: 9407 aagctgttgatcttgttgacaagtgcat 9380
>gb|EF051300.1| Gymnadenia conopsea proteasome chain protein-like mRNA, complete sequence Length = 850 Score = 139 bits (70), Expect = 2e-29 Identities = 169/202 (83%) Strand = Plus / Plus Query: 185 gcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcccacaagctca 244 |||||||||||||||| | ||||||||||||||||| | |||||||||||||||||| Sbjct: 152 gcatcctcgtccacaaatctaacgaggacaagatcatggttctcgactcccacaagctcc 211 Query: 245 tgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatccagaagaacc 304 | |||||||| |||||| |||| || || | ||||||||||||| ||||||||||||| Sbjct: 212 tcggcgcctctggcgaggccggtgatcgagcacagttcaccgagtacatccagaagaacg 271 Query: 305 tccacctctaccagttccgcaacaacatgccgctcagcaccgccgccaccgccaacttca 364 |||| || || |||||| | ||| ||| || || ||||| ||||| | |||||||||| Sbjct: 272 tccatctgtatcagttcagaaacggcatcccactaagcactgccgctgctgccaacttca 331 Query: 365 cccgcggcgagctcgccaccgc 386 || | ||||||||||||||||| Sbjct: 332 ccaggggcgagctcgccaccgc 353
>gb|DQ245286.1| Zea mays clone 14308 mRNA sequence Length = 770 Score = 75.8 bits (38), Expect = 3e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 160 gcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggacaagatc 219 ||||||||||||||||| || || |||||||| || ||||||| |||||||||||||| Sbjct: 72 gcggcggacacgtcggcggttcacagcatccttgtacacaagaacaacgaggacaagatc 131 Query: 220 atgctcctcgactcccacaagctcat 245 ||| ||| ||||| ||||||||||| Sbjct: 132 atggcccttgactctcacaagctcat 157 Score = 56.0 bits (28), Expect = 2e-04 Identities = 136/172 (79%) Strand = Plus / Plus Query: 355 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 414 ||||| ||||| ||||| ||||||||||| || | || ||||||||||||||||| ||| Sbjct: 267 gccaatttcactcgcggtgagctcgccactgctttgcgaaagaatccctactctgtgaac 326 Query: 415 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 474 || | | || || | || ||||| || || ||||| | ||||||||||||||||| Sbjct: 327 atcctgatggctggctacgacaaagaagcaggcgcatctctttactacattgactacatt 386 Query: 475 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttct 526 || || || |||||| | |||||||| ||||| || ||||| || ||||||| Sbjct: 387 gcaactcttcacaaggttgacaagggcgcattcggttacggctcatacttct 438
>dbj|AK227835.1| Arabidopsis thaliana mRNA for proteasome chain protein, complete cds, clone: RAFL14-40-K07 Length = 807 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 436 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 495 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 386 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 445 Query: 496 aagggagcatttgggtacgggtcgtacttct 526 |||||||||||||| ||||| || ||||||| Sbjct: 446 aagggagcatttggatacggctcatacttct 476
>ref|NM_117565.2| Arabidopsis thaliana PBD2 (20S PROTEASOME BETA SUBUNIT 2); peptidase/ threonine endopeptidase (PBD2) mRNA, complete cds Length = 881 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 436 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 495 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 432 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 491 Query: 496 aagggagcatttgggtacgggtcgtacttct 526 |||||||||||||| ||||| || ||||||| Sbjct: 492 aagggagcatttggatacggctcatacttct 522
>gb|BT024588.1| Arabidopsis thaliana At4g14800 mRNA, complete cds Length = 600 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 436 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 495 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 322 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 381 Query: 496 aagggagcatttgggtacgggtcgtacttct 526 |||||||||||||| ||||| || ||||||| Sbjct: 382 aagggagcatttggatacggctcatacttct 412
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 436 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 495 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 66846 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 66905 Query: 496 aagggagcatttgggtacgggtcgtacttct 526 |||||||||||||| ||||| || ||||||| Sbjct: 66906 aagggagcatttggatacggctcatacttct 66936
>emb|Y13175.1|ATY13175 Arabidopsis thaliana mRNA for proteasome subunit prcga Length = 829 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 436 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 495 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 341 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 400 Query: 496 aagggagcatttgggtacgggtcgtacttct 526 |||||||||||||| ||||| || ||||||| Sbjct: 401 aagggagcatttggatacggctcatacttct 431
>gb|AY086350.1| Arabidopsis thaliana clone 24266 mRNA, complete sequence Length = 848 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 436 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 495 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 433 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 492 Query: 496 aagggagcatttgggtacgggtcgtacttct 526 |||||||||||||| ||||| || ||||||| Sbjct: 493 aagggagcatttggatacggctcatacttct 523
>gb|AF043535.1|AF043535 Arabidopsis thaliana 20S proteasome beta subunit PBD2 (PBD2) mRNA, complete cds Length = 828 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 436 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 495 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 341 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 400 Query: 496 aagggagcatttgggtacgggtcgtacttct 526 |||||||||||||| ||||| || ||||||| Sbjct: 401 aagggagcatttggatacggctcatacttct 431
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 436 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 495 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 12300 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 12359 Query: 496 aagggagcatttgggtacgggtcgtacttct 526 |||||||||||||| ||||| || ||||||| Sbjct: 12360 aagggagcatttggatacggctcatacttct 12390
>emb|BX828636.1|CNS0A2J1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL24ZF09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 751 Score = 61.9 bits (31), Expect = 4e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 457 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacgg 515 ||||||||||||||||| || || ||||||||| | || |||||||||||||| ||||| Sbjct: 367 tactacattgactacattgcaaccctccacaaggttgataagggagcatttggatacgg 425
>gb|BT018812.1| Zea mays clone EL01N0530D10.d mRNA sequence Length = 1829 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 353 ccgccaacttcacccgcggcgagctcgccaccgccctccg 392 |||||||||||||||| ||||||||| |||| |||||||| Sbjct: 119 ccgccaacttcacccgaggcgagctcaccacagccctccg 158
>ref|NM_113162.2| Arabidopsis thaliana PBD1 (PROTEASOME SUBUNIT PRGB); peptidase/ threonine endopeptidase (PBD1) mRNA, complete cds Length = 854 Score = 52.0 bits (26), Expect = 0.004 Identities = 59/70 (84%) Strand = Plus / Plus Query: 457 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 516 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 413 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 472 Query: 517 tcgtacttct 526 || ||||||| Sbjct: 473 tcctacttct 482
>ref|NM_113160.2| Arabidopsis thaliana lipid binding (AT3G22620) mRNA, complete cds Length = 1295 Score = 52.0 bits (26), Expect = 0.004 Identities = 59/70 (84%) Strand = Plus / Minus Query: 457 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 516 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 1259 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 1200 Query: 517 tcgtacttct 526 || ||||||| Sbjct: 1199 tcctacttct 1190
>gb|AY143817.1| Arabidopsis thaliana At3g22630/F16J14_20 mRNA, complete cds Length = 615 Score = 52.0 bits (26), Expect = 0.004 Identities = 59/70 (84%) Strand = Plus / Plus Query: 457 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 516 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 343 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 402 Query: 517 tcgtacttct 526 || ||||||| Sbjct: 403 tcctacttct 412
>gb|AY052249.1| Arabidopsis thaliana AT3g22630/F16J14_20 mRNA, complete cds Length = 836 Score = 52.0 bits (26), Expect = 0.004 Identities = 59/70 (84%) Strand = Plus / Plus Query: 457 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 516 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 395 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 454 Query: 517 tcgtacttct 526 || ||||||| Sbjct: 455 tcctacttct 464
>emb|Y13692.1|ATY13692 Arabidopsis thaliana mRNA for proteasome subunit prgb Length = 753 Score = 52.0 bits (26), Expect = 0.004 Identities = 59/70 (84%) Strand = Plus / Plus Query: 457 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 516 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 366 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 425 Query: 517 tcgtacttct 526 || ||||||| Sbjct: 426 tcctacttct 435
>dbj|AP000731.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F16J14 Length = 47827 Score = 52.0 bits (26), Expect = 0.004 Identities = 59/70 (84%) Strand = Plus / Minus Query: 457 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 516 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 47022 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 46963 Query: 517 tcgtacttct 526 || ||||||| Sbjct: 46962 tcctacttct 46953
>emb|BX826068.1|CNS0A687 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 743 Score = 52.0 bits (26), Expect = 0.004 Identities = 59/70 (84%) Strand = Plus / Plus Query: 457 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 516 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 344 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 403 Query: 517 tcgtacttct 526 || ||||||| Sbjct: 404 tcctacttct 413
>gb|AF043534.1|AF043534 Arabidopsis thaliana 20S proteasome beta subunit PBD1 (PBD1) mRNA, complete cds Length = 839 Score = 52.0 bits (26), Expect = 0.004 Identities = 59/70 (84%) Strand = Plus / Plus Query: 457 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 516 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 413 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 472 Query: 517 tcgtacttct 526 || ||||||| Sbjct: 473 tcctacttct 482
>emb|BX061810.1|CNS09JUU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC42DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 995 Score = 48.1 bits (24), Expect = 0.059 Identities = 30/32 (93%) Strand = Plus / Minus Query: 263 ccggcgaccgcgtgcagttcaccgagttcatc 294 |||||||||| |||||||||||||||| |||| Sbjct: 695 ccggcgaccgtgtgcagttcaccgagtacatc 664
>emb|BX039049.1|CNS092AL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB3CH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 713 Score = 48.1 bits (24), Expect = 0.059 Identities = 30/32 (93%) Strand = Plus / Minus Query: 263 ccggcgaccgcgtgcagttcaccgagttcatc 294 |||||||||| |||||||||||||||| |||| Sbjct: 596 ccggcgaccgtgtgcagttcaccgagtacatc 565
>emb|BX039048.1|CNS092AK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3CH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 667 Score = 48.1 bits (24), Expect = 0.059 Identities = 30/32 (93%) Strand = Plus / Plus Query: 263 ccggcgaccgcgtgcagttcaccgagttcatc 294 |||||||||| |||||||||||||||| |||| Sbjct: 255 ccggcgaccgtgtgcagttcaccgagtacatc 286
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Minus Query: 282 caccgagttcatccagaagaacc 304 ||||||||||||||||||||||| Sbjct: 4174452 caccgagttcatccagaagaacc 4174430
>gb|AE012475.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 383 of 460 of the complete genome Length = 9984 Score = 46.1 bits (23), Expect = 0.23 Identities = 32/35 (91%) Strand = Plus / Plus Query: 335 cgctcagcaccgccgccaccgccaacttcacccgc 369 |||||||||||| |||||||||| || |||||||| Sbjct: 7477 cgctcagcaccgtcgccaccgccgacatcacccgc 7511
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 715 gcagccgcaaccacagccgcaac 737 ||||||||||||||||||||||| Sbjct: 5863302 gcagccgcaaccacagccgcaac 5863324
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.23 Identities = 32/35 (91%) Strand = Plus / Minus Query: 335 cgctcagcaccgccgccaccgccaacttcacccgc 369 |||||||||||| |||||||||| || |||||||| Sbjct: 727770 cgctcagcaccgtcgccaccgccgacatcacccgc 727736
>ref|XM_319581.2| Anopheles gambiae str. PEST ENSANGP00000016798 (ENSANGG00000014309), partial mRNA Length = 723 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 263 ccggcgaccgcgtgcagttcaccgagt 289 |||||||||| |||||||||||||||| Sbjct: 263 ccggcgaccgtgtgcagttcaccgagt 289
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 44.1 bits (22), Expect = 0.92 Identities = 22/22 (100%) Strand = Plus / Plus Query: 714 tgcagccgcaaccacagccgca 735 |||||||||||||||||||||| Sbjct: 1928267 tgcagccgcaaccacagccgca 1928288
>dbj|AK092081.1| Homo sapiens cDNA FLJ34762 fis, clone NT2NE2002100 Length = 2271 Score = 44.1 bits (22), Expect = 0.92 Identities = 22/22 (100%) Strand = Plus / Plus Query: 421 cttgcagggtttgataaagatg 442 |||||||||||||||||||||| Sbjct: 1627 cttgcagggtttgataaagatg 1648
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.92 Identities = 28/30 (93%) Strand = Plus / Plus Query: 332 tgccgctcagcaccgccgccaccgccaact 361 ||||| ||||||||||||||||||| |||| Sbjct: 4406494 tgccggtcagcaccgccgccaccgcgaact 4406523
>emb|AL512324.14| Human DNA sequence from clone RP11-432I13 on chromosome 10 Contains the 3' end of a breast cancer antigen (NY-BR-1) pseudogene, the 3' end of a novel gene, a pseudogene similar to part of cubilin (intrinsic factor-cobalamin receptor, CUBN), a seven transmembrane helix receptor (FLJ31393) pseudogene, the OR13A1 gene for olfactory receptor family 13 subfamily A member 1 and two CpG islands, complete sequence Length = 168473 Score = 44.1 bits (22), Expect = 0.92 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 cttgcagggtttgataaagatg 442 |||||||||||||||||||||| Sbjct: 109656 cttgcagggtttgataaagatg 109635
>emb|BX061809.1|CNS09JUT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC42DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 976 Score = 44.1 bits (22), Expect = 0.92 Identities = 28/30 (93%) Strand = Plus / Plus Query: 265 ggcgaccgcgtgcagttcaccgagttcatc 294 |||||||| |||||||||||||||| |||| Sbjct: 245 ggcgaccgtgtgcagttcaccgagtacatc 274
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 44.1 bits (22), Expect = 0.92 Identities = 28/30 (93%) Strand = Plus / Plus Query: 138 cggccgcgacttcgcggtggtggcggcgga 167 |||||||| |||||| |||||||||||||| Sbjct: 62988 cggccgcggcttcgccgtggtggcggcgga 63017
>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE Length = 117135 Score = 44.1 bits (22), Expect = 0.92 Identities = 52/62 (83%) Strand = Plus / Minus Query: 184 agcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcccacaagctc 243 ||||||||||| ||||| | |||| |||||||||||| ||||||| || ||||| ||| Sbjct: 17845 agcatcctcgttcacaaatccaacgaagacaagatcatgttcctcgattcacacaaactc 17786 Query: 244 at 245 || Sbjct: 17785 at 17784
>gb|AC008770.7| Homo sapiens chromosome 19 clone CTD-2006C1, complete sequence Length = 178184 Score = 44.1 bits (22), Expect = 0.92 Identities = 22/22 (100%) Strand = Plus / Plus Query: 421 cttgcagggtttgataaagatg 442 |||||||||||||||||||||| Sbjct: 1110 cttgcagggtttgataaagatg 1131
>gb|AC003029.5| Homo sapiens 12 PAC RP3-462E2 (Roswell Park Cancer institute Human PAC Library) complete sequence Length = 137830 Score = 44.1 bits (22), Expect = 0.92 Identities = 22/22 (100%) Strand = Plus / Plus Query: 421 cttgcagggtttgataaagatg 442 |||||||||||||||||||||| Sbjct: 29369 cttgcagggtttgataaagatg 29390
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.92 Identities = 22/22 (100%) Strand = Plus / Plus Query: 340 agcaccgccgccaccgccaact 361 |||||||||||||||||||||| Sbjct: 671249 agcaccgccgccaccgccaact 671270
>gb|AC020951.7| Homo sapiens chromosome 19 clone LLNLR-247E3, complete sequence Length = 35711 Score = 44.1 bits (22), Expect = 0.92 Identities = 22/22 (100%) Strand = Plus / Plus Query: 421 cttgcagggtttgataaagatg 442 |||||||||||||||||||||| Sbjct: 23471 cttgcagggtttgataaagatg 23492
>gb|AF079797.1|AF079797 Homo sapiens human endogenous retrovirus HML6 gag, pol, and env pseudogenes, complete sequence Length = 7736 Score = 44.1 bits (22), Expect = 0.92 Identities = 22/22 (100%) Strand = Plus / Minus Query: 421 cttgcagggtttgataaagatg 442 |||||||||||||||||||||| Sbjct: 3359 cttgcagggtttgataaagatg 3338
>ref|XM_838505.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1424) partial mRNA Length = 3090 Score = 44.1 bits (22), Expect = 0.92 Identities = 22/22 (100%) Strand = Plus / Plus Query: 714 tgcagccgcaaccacagccgca 735 |||||||||||||||||||||| Sbjct: 2165 tgcagccgcaaccacagccgca 2186
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 tcagcaccgccgccaccgcca 358 ||||||||||||||||||||| Sbjct: 331172 tcagcaccgccgccaccgcca 331152
>ref|NM_001067056.1| Oryza sativa (japonica cultivar-group) Os07g0658600 (Os07g0658600) mRNA, complete cds Length = 1350 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 agcaccgccgccaccgccaac 360 ||||||||||||||||||||| Sbjct: 56 agcaccgccgccaccgccaac 36
>ref|NM_001050938.1| Oryza sativa (japonica cultivar-group) Os01g0774200 (Os01g0774200) mRNA, complete cds Length = 1690 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 aaccagcagcggcgtcgccgg 112 ||||||||||||||||||||| Sbjct: 298 aaccagcagcggcgtcgccgg 318
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 ggccgcgacttcgcggtggtggcgg 163 ||||||| ||||||||||||||||| Sbjct: 255389 ggccgcggcttcgcggtggtggcgg 255413 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 ggccgcgacttcgcggtggtggcgg 163 ||||||| ||||||||||||||||| Sbjct: 260529 ggccgcggcttcgcggtggtggcgg 260553 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 ggccgcgacttcgcggtggtggcgg 163 ||||||| ||||||||||||||||| Sbjct: 262277 ggccgcggcttcgcggtggtggcgg 262301
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 tcagcaccgccgccaccgcca 358 ||||||||||||||||||||| Sbjct: 4672793 tcagcaccgccgccaccgcca 4672773
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 365 cccgcggcgagctcgccaccg 385 ||||||||||||||||||||| Sbjct: 1833938 cccgcggcgagctcgccaccg 1833958
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 cggccgcgacttcgcggtggtggcg 162 |||||||| |||||||||||||||| Sbjct: 21581 cggccgcggcttcgcggtggtggcg 21605
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 cggccgcgacttcgcggtggtggcg 162 |||||||| |||||||||||||||| Sbjct: 70128 cggccgcggcttcgcggtggtggcg 70152 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 138 cggccgcgacttcgcggtggtggcg 162 |||||||| |||||||||||||||| Sbjct: 4556646 cggccgcggcttcgcggtggtggcg 4556622
>gb|BT018688.1| Zea mays clone EL01N0512B07.d mRNA sequence Length = 1910 Score = 42.1 bits (21), Expect = 3.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 355 gccaacttcacccgcggcgagctcgccac 383 ||||||||||||| |||||||||| |||| Sbjct: 260 gccaacttcacccccggcgagctcaccac 288
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 aggaagcggtagaccttgttg 592 ||||||||||||||||||||| Sbjct: 1694017 aggaagcggtagaccttgttg 1693997
>ref|XM_864952.1| PREDICTED: Bos taurus similar to zinc finger homeodomain 4, transcript variant 3 (LOC539762), mRNA Length = 13873 Score = 42.1 bits (21), Expect = 3.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 717 agccgcaaccacagccgcaacagtagcaacaac 749 ||||||| ||||||||||||||| | ||||||| Sbjct: 5684 agccgcagccacagccgcaacagcaacaacaac 5716
>ref|XM_874567.1| PREDICTED: Bos taurus similar to zinc finger homeodomain 4, transcript variant 5 (LOC539762), mRNA Length = 13876 Score = 42.1 bits (21), Expect = 3.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 717 agccgcaaccacagccgcaacagtagcaacaac 749 ||||||| ||||||||||||||| | ||||||| Sbjct: 5686 agccgcagccacagccgcaacagcaacaacaac 5718
>ref|XM_589234.2| PREDICTED: Bos taurus similar to zinc finger homeodomain 4, transcript variant 2 (LOC539762), mRNA Length = 13204 Score = 42.1 bits (21), Expect = 3.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 717 agccgcaaccacagccgcaacagtagcaacaac 749 ||||||| ||||||||||||||| | ||||||| Sbjct: 5855 agccgcagccacagccgcaacagcaacaacaac 5887
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 ggccgcgacttcgcggtggtggcgg 163 ||||||| ||||||||||||||||| Sbjct: 48272 ggccgcggcttcgcggtggtggcgg 48248
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 agcaccgccgccaccgccaac 360 ||||||||||||||||||||| Sbjct: 27692825 agcaccgccgccaccgccaac 27692805
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 aaccagcagcggcgtcgccgg 112 ||||||||||||||||||||| Sbjct: 32728915 aaccagcagcggcgtcgccgg 32728935
>emb|AL138698.15| Human DNA sequence from clone RP11-393H6 on chromosome 13q21.33-22.3 Contains part of the DACH gene for dachshund homolog (Drosophila) (DACH1 FLJ10138), a H3 histone family pseudogene and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 102371 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 atacttgcagggtttgataaa 438 ||||||||||||||||||||| Sbjct: 86219 atacttgcagggtttgataaa 86239
>gb|AC093553.1| Leishmania donovani clone XX-BNI_Clos11.2, complete sequence Length = 36123 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 accagcagcggcgtcgccggc 113 ||||||||||||||||||||| Sbjct: 13422 accagcagcggcgtcgccggc 13402
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 ggcgagctcgccaccgccctc 390 ||||||||||||||||||||| Sbjct: 140069 ggcgagctcgccaccgccctc 140089
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 aaccagcagcggcgtcgccgg 112 ||||||||||||||||||||| Sbjct: 91710 aaccagcagcggcgtcgccgg 91730
>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE Length = 153273 Score = 42.1 bits (21), Expect = 3.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 211 gacaagatcatgctcctcgactcccacaa 239 |||||||||||| ||||||| |||||||| Sbjct: 53244 gacaagatcatgttcctcgattcccacaa 53272
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 agcaccgccgccaccgccaac 360 ||||||||||||||||||||| Sbjct: 71927 agcaccgccgccaccgccaac 71907
>gb|AE009471.1| Brucella melitensis 16M chromosome I, section 28 of 195 of the complete sequence Length = 10783 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 572 aggaagcggtagaccttgttg 592 ||||||||||||||||||||| Sbjct: 1098 aggaagcggtagaccttgttg 1118
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 agcaccgccgccaccgccaac 360 ||||||||||||||||||||| Sbjct: 149818 agcaccgccgccaccgccaac 149798
>gb|AC007428.5|AC007428 Homo sapiens, clone RP11-69A1, complete sequence Length = 156180 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 atacttgcagggtttgataaa 438 ||||||||||||||||||||| Sbjct: 61465 atacttgcagggtttgataaa 61485
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 aggaagcggtagaccttgttg 592 ||||||||||||||||||||| Sbjct: 1710939 aggaagcggtagaccttgttg 1710919
>gb|AY106361.1| Zea mays PCO118979 mRNA sequence Length = 1873 Score = 42.1 bits (21), Expect = 3.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 355 gccaacttcacccgcggcgagctcgccac 383 ||||||||||||| |||||||||| |||| Sbjct: 205 gccaacttcacccccggcgagctcaccac 233
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 ggccgcgacttcgcggtggtggcgg 163 ||||||| ||||||||||||||||| Sbjct: 38265 ggccgcggcttcgcggtggtggcgg 38241 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 ggccgcgacttcgcggtggtggcgg 163 ||||||| ||||||||||||||||| Sbjct: 658107 ggccgcggcttcgcggtggtggcgg 658131 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 ggccgcgacttcgcggtggtggcgg 163 ||||||| ||||||||||||||||| Sbjct: 1495791 ggccgcggcttcgcggtggtggcgg 1495815 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 ggccgcgacttcgcggtggtggcgg 163 ||||||| ||||||||||||||||| Sbjct: 4172298 ggccgcggcttcgcggtggtggcgg 4172322
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 caccgccgccaccgccaactt 362 ||||||||||||||||||||| Sbjct: 1358543 caccgccgccaccgccaactt 1358523
>gb|DQ298019.1| Klebsiella pneumoniae plasmid pIGMS32, complete sequence Length = 9294 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 566 ctgtcgaggaagcggtagacc 586 ||||||||||||||||||||| Sbjct: 2517 ctgtcgaggaagcggtagacc 2537
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ccgaaccagcagcggcgtcgc 109 ||||||||||||||||||||| Sbjct: 2386030 ccgaaccagcagcggcgtcgc 2386050
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 aggaagcggtagaccttgttg 592 ||||||||||||||||||||| Sbjct: 1708096 aggaagcggtagaccttgttg 1708076
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 3.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 342 caccgccgccaccgccaacttcacccgcg 370 ||||||||||||||||||| | ||||||| Sbjct: 3430244 caccgccgccaccgccaacctgacccgcg 3430272 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 139,686,211 Number of extensions: 7509389 Number of successful extensions: 162844 Number of sequences better than 10.0: 89 Number of HSP's gapped: 162839 Number of HSP's successfully gapped: 113 Length of query: 968 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 945 Effective length of database: 18,503,978,556 Effective search space: 17486259735420 Effective search space used: 17486259735420 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)