ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf97g05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os09g0501700:Os09g0501700 | 250 | 5e-67 | 2 | AK120524:Os09g0502000 | 249 | 2e-66 | 3 | AK099282: | 247 | 4e-66 | 4 | AK063752: | 247 | 4e-66 | 5 | Os08g0524600:Os08g0524600 | 244 | 3e-65 | 6 | Os09g0501200:Os09g0501200 | 172 | 2e-43 | 7 | AF140494: | 103 | 1e-22 | 8 | Os02g0694100:Os02g0694100 | 29 | 2.5 | 9 | Os03g0259500:Os03g0259500 | 28 | 7.2 | 10 | AK063373:Os02g0152700 | 28 | 7.2 |
|---|
>Os09g0501700:Os09g0501700 | Length = 170 Score = 250 bits (639), Expect = 5e-67 Identities = 130/166 (78%), Positives = 136/166 (81%) Frame = +1 Query: 7 GFISSRVAHHLDSSSPHTPSHLXXXXXXXSPCKMAVPILKTAIVKKRVKHFKRAHSDRYI 186 GF+ R L +SS TP KMAVP+L IVKKRVK FKR HSDRYI Sbjct: 7 GFLDIRKPSLLPNSS--TPPPPPPPRRCSDRSKMAVPLLTKKIVKKRVKQFKRPHSDRYI 64 Query: 187 GLKQSWRRPKGIDSRVRRKFKGCTLMPNIGYGSNKKTRHYLPNKFKKFVVHNVSELELLM 366 GLK SWRRPKGIDSRVRRKFKGCTLMPNIGYGS+KKTRHYLPNKFKKFVVHNVSELELLM Sbjct: 65 GLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNKFKKFVVHNVSELELLM 124 Query: 367 MHNRTYCAEIAHNVSTQKRKAIVERAAQLDVVVTNKLARLRSQEDE 504 MHNR YCAEIAHNVST+KRK IVERAAQLD+VVTNKLARLRSQEDE Sbjct: 125 MHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE 170
>AK120524:Os09g0502000 | Length = 133 Score = 249 bits (635), Expect = 2e-66 Identities = 122/133 (91%), Positives = 126/133 (94%) Frame = +1 Query: 106 MAVPILKTAIVKKRVKHFKRAHSDRYIGLKQSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 285 MAVP+L IVKKRVK FKR HSDRYIGLK SWRRPKGIDSRVRRKFKGCTLMPNIGYGS Sbjct: 1 MAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60 Query: 286 NKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTQKRKAIVERAAQLDVVV 465 +KKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVST+KRK IVERAAQLD+VV Sbjct: 61 DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVV 120 Query: 466 TNKLARLRSQEDE 504 TNKLARLRSQEDE Sbjct: 121 TNKLARLRSQEDE 133
>AK099282: | Length = 133 Score = 247 bits (631), Expect = 4e-66 Identities = 121/133 (90%), Positives = 125/133 (93%) Frame = +1 Query: 106 MAVPILKTAIVKKRVKHFKRAHSDRYIGLKQSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 285 M VP+L IVKKRVK FKR HSDRYIGLK SWRRPKGIDSRVRRKFKGCTLMPNIGYGS Sbjct: 1 MVVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60 Query: 286 NKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTQKRKAIVERAAQLDVVV 465 +KKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVST+KRK IVERAAQLD+VV Sbjct: 61 DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVV 120 Query: 466 TNKLARLRSQEDE 504 TNKLARLRSQEDE Sbjct: 121 TNKLARLRSQEDE 133
>AK063752: | Length = 133 Score = 247 bits (631), Expect = 4e-66 Identities = 121/133 (90%), Positives = 125/133 (93%) Frame = +1 Query: 106 MAVPILKTAIVKKRVKHFKRAHSDRYIGLKQSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 285 M VP+L IVKKRVK FKR HSDRYIGLK SWRRPKGIDSRVRRKFKGCTLMPNIGYGS Sbjct: 1 MVVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60 Query: 286 NKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTQKRKAIVERAAQLDVVV 465 +KKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVST+KRK IVERAAQLD+VV Sbjct: 61 DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDIVV 120 Query: 466 TNKLARLRSQEDE 504 TNKLARLRSQEDE Sbjct: 121 TNKLARLRSQEDE 133
>Os08g0524600:Os08g0524600 | Length = 133 Score = 244 bits (624), Expect = 3e-65 Identities = 120/133 (90%), Positives = 125/133 (93%) Frame = +1 Query: 106 MAVPILKTAIVKKRVKHFKRAHSDRYIGLKQSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 285 MAVP+L IVKKRVK FKR HSDRY+ LK SWRRPKGIDSRVRRKFKGCTLMPNIGYGS Sbjct: 1 MAVPLLTKKIVKKRVKQFKRPHSDRYLCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60 Query: 286 NKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTQKRKAIVERAAQLDVVV 465 +KKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVST+KRK IVERAAQLD+VV Sbjct: 61 DKKTRHYLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVV 120 Query: 466 TNKLARLRSQEDE 504 TNKLARLRSQEDE Sbjct: 121 TNKLARLRSQEDE 133
>Os09g0501200:Os09g0501200 | Length = 186 Score = 172 bits (436), Expect = 2e-43 Identities = 82/91 (90%), Positives = 84/91 (92%) Frame = +1 Query: 106 MAVPILKTAIVKKRVKHFKRAHSDRYIGLKQSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 285 M VP+L IVKKRVK FKR HSDRYIGLK SWRRPKGIDSRVRRKFKGCTLMPNIGYGS Sbjct: 61 MVVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 120 Query: 286 NKKTRHYLPNKFKKFVVHNVSELELLMMHNR 378 +KKTRHYLPNKFKKFVVHNVSELELLMMHNR Sbjct: 121 DKKTRHYLPNKFKKFVVHNVSELELLMMHNR 151
>AF140494: | Length = 113 Score = 103 bits (257), Expect = 1e-22 Identities = 49/56 (87%), Positives = 50/56 (89%) Frame = +1 Query: 103 KMAVPILKTAIVKKRVKHFKRAHSDRYIGLKQSWRRPKGIDSRVRRKFKGCTLMPN 270 KMAVP+L IVKKRVK FKR HSDRYIGLK SWRRPKGIDSRVRRKFKGCTLMPN Sbjct: 10 KMAVPLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPN 65 Score = 63.2 bits (152), Expect = 2e-10 Identities = 37/67 (55%), Positives = 41/67 (61%), Gaps = 11/67 (16%) Frame = +3 Query: 213 KGYRLPRQAEVQGMHLDAQHWIWF*QEDQALPAQQ-----------VQEVCCAQRL*AGA 359 KG + + +G L +WIWF QEDQALPAQQ VQEVC AQRL AGA Sbjct: 47 KGIDSRVRRKFKGCTLMPNYWIWFGQEDQALPAQQVQEDQALPAQQVQEVCGAQRLRAGA 106 Query: 360 AYDAQQD 380 AYDAQQD Sbjct: 107 AYDAQQD 113
>Os02g0694100:Os02g0694100 | Length = 828 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = -3 Query: 483 PGKLVGDHDVKLGSTLHYRLALLSGHVVRDLSTVRPVV---HHKQLQLRDVVHNKLLELV 313 P V D+ TLHY A+ + H++ ++ ++ VV Q++L++ +LL LV Sbjct: 608 PQSSVAFSDMPALRTLHYLGAMATRHIIDNVDSLEEVVLAIKKPQVKLQEPNLRELLSLV 667 Query: 312 GQV 304 G V Sbjct: 668 GNV 670
>Os03g0259500:Os03g0259500 | Length = 139 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -3 Query: 486 EPGKLVGDHDVKLGSTLHYRLALLSGHV 403 E G+ + D++++ STLH L L GH+ Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGHI 78
>AK063373:Os02g0152700 | Length = 160 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = -3 Query: 357 LQLRDVVHNKLLELVGQVVPGLLVRTISNVGHQGASLELPPDAGV 223 L L +VH LL+ ++ G+L++ +S+V G ++ P+ + Sbjct: 81 LHLHQIVHGMLLQFPKGMMSGILLKPMSHVIRTGNQMDGVPEVAI 125 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,435,375 Number of extensions: 308327 Number of successful extensions: 936 Number of sequences better than 10.0: 10 Number of HSP's gapped: 935 Number of HSP's successfully gapped: 11 Length of query: 221 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 124 Effective length of database: 11,515,878 Effective search space: 1427968872 Effective search space used: 1427968872 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
