ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf99l05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066762.1| Oryza sativa (japonica cultivar-group) Os07g0605800 (Os07g0605800) mRNA, complete cds Length = 1362 Score = 281 bits (142), Expect = 3e-72 Identities = 424/515 (82%), Gaps = 6/515 (1%) Strand = Plus / Plus Query: 266 cgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcacc 325 ||||||||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 264 cgccgcttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcacc 323 Query: 326 acgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccggcg 385 ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | || Sbjct: 324 acgtggctcaaggcgctggccttcgccgccatgacccgcgccgcctacccggcg--gacg 381 Query: 386 cagcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttc 445 | |||||||| ||||||||||||||||||||| |||||||||| | || || ||||| Sbjct: 382 aa-cacccgctgctccgcctcaacccgcacgacgtcatcccgttcgtcgaggacgtcttc 440 Query: 446 gccgacgggcaggaggccaagctcgagaagctcccgtcgccgcgcctcatgaacacgcac 505 ||||||| || |||||||||||||| | |||||| |||||||||||||| ||||||||| Sbjct: 441 accgacggccacgaggccaagctcgacatgctcccctcgccgcgcctcatcaacacgcac 500 Query: 506 atgccgtacaccctgctccccgagtcg---gtcaccggcgccgccgtcgccggctgcaag 562 | ||||||| || ||||| |||||| ||| |||||| || || || ||| |||||| Sbjct: 501 acgccgtaccagcttctcccggagtcggtcgtcgccggcgacggcggcggcggatgcaag 560 Query: 563 gtggcgtacgtctgtagggaccccaaggacatggtcgtctccctgtggcacttcctccgg 622 || | ||| |||| ||||||||||||||||||||||| || |||| |||||| | ||| Sbjct: 561 gtcgtctacatctgcagggaccccaaggacatggtcgtgtcgctgtaccacttcatgcgg 620 Query: 623 cgccggcagcccgacctcccgttcgccgagctgttcgagcacgtctgcgacggtgccgtg 682 |||| ||||||||||| || |||||| || | ||| |||| |||||| | ||| Sbjct: 621 cgcctccagcccgacctgtcgctcgccggcgtggtggagtccgtcgccgacggcacggtg 680 Query: 683 gccgtcggcccgatctgggaccacgtgctcacctactggcacgcgagcgtcgcgcggcca 742 | |||| ||||| ||||||||| | ||| |||||||| ||||||||| | || || Sbjct: 681 ccgttcgggccgatgtgggaccacatcctcggctactggcgggcgagcgtctcccgcccg 740 Query: 743 gacagggtgctcttcctcaagtacgaggacctgct 777 ||| |||||||||| |||| ||||||||||||||| Sbjct: 741 gaccgggtgctcttactcaggtacgaggacctgct 775 Score = 159 bits (80), Expect = 3e-35 Identities = 170/200 (85%) Strand = Plus / Plus Query: 814 gttcatgggccggccgttctcgtccgccgaggagggcgccggagccgtggaggccgtggt 873 ||||||||| |||||||||||| |||||||||||| |||||| ||||| | | ||| || Sbjct: 818 gttcatggggcggccgttctcggccgccgaggaggccgccggcgccgtagcgagcgtcgt 877 Query: 874 ggagctgtgcagcttcgagaagatgaagggcctggaggtgaacaagaagggctcgtcggg 933 |||| ||||||||||||||| |||||||| |||||||||||| | |||| || |||| Sbjct: 878 ggagttgtgcagcttcgagaggatgaaggcgctggaggtgaaccggcggggcacggcggg 937 Query: 934 ggcgtaccacgccatgccccgcgacgccttcttcaggaaaggggtcgccggagactgggt 993 | ||||| | |||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 938 gtcgtacaagagcatgccgcgcgacgccttcttcaggaagggcgtcgccggcgactgggc 997 Query: 994 gaaccacatgacgccggaga 1013 |||||||||| ||||||||| Sbjct: 998 gaaccacatgtcgccggaga 1017 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 146 gaggagttcggggacctcgtcgcagcgctgccgcg 180 ||||||||||| ||||||||||| ||||||||||| Sbjct: 147 gaggagttcggcgacctcgtcgcggcgctgccgcg 181
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 281 bits (142), Expect = 3e-72 Identities = 424/515 (82%), Gaps = 6/515 (1%) Strand = Plus / Plus Query: 266 cgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcacc 325 ||||||||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 24791798 cgccgcttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcacc 24791857 Query: 326 acgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccggcg 385 ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | || Sbjct: 24791858 acgtggctcaaggcgctggccttcgccgccatgacccgcgccgcctacccggcg--gacg 24791915 Query: 386 cagcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttc 445 | |||||||| ||||||||||||||||||||| |||||||||| | || || ||||| Sbjct: 24791916 aa-cacccgctgctccgcctcaacccgcacgacgtcatcccgttcgtcgaggacgtcttc 24791974 Query: 446 gccgacgggcaggaggccaagctcgagaagctcccgtcgccgcgcctcatgaacacgcac 505 ||||||| || |||||||||||||| | |||||| |||||||||||||| ||||||||| Sbjct: 24791975 accgacggccacgaggccaagctcgacatgctcccctcgccgcgcctcatcaacacgcac 24792034 Query: 506 atgccgtacaccctgctccccgagtcg---gtcaccggcgccgccgtcgccggctgcaag 562 | ||||||| || ||||| |||||| ||| |||||| || || || ||| |||||| Sbjct: 24792035 acgccgtaccagcttctcccggagtcggtcgtcgccggcgacggcggcggcggatgcaag 24792094 Query: 563 gtggcgtacgtctgtagggaccccaaggacatggtcgtctccctgtggcacttcctccgg 622 || | ||| |||| ||||||||||||||||||||||| || |||| |||||| | ||| Sbjct: 24792095 gtcgtctacatctgcagggaccccaaggacatggtcgtgtcgctgtaccacttcatgcgg 24792154 Query: 623 cgccggcagcccgacctcccgttcgccgagctgttcgagcacgtctgcgacggtgccgtg 682 |||| ||||||||||| || |||||| || | ||| |||| |||||| | ||| Sbjct: 24792155 cgcctccagcccgacctgtcgctcgccggcgtggtggagtccgtcgccgacggcacggtg 24792214 Query: 683 gccgtcggcccgatctgggaccacgtgctcacctactggcacgcgagcgtcgcgcggcca 742 | |||| ||||| ||||||||| | ||| |||||||| ||||||||| | || || Sbjct: 24792215 ccgttcgggccgatgtgggaccacatcctcggctactggcgggcgagcgtctcccgcccg 24792274 Query: 743 gacagggtgctcttcctcaagtacgaggacctgct 777 ||| |||||||||| |||| ||||||||||||||| Sbjct: 24792275 gaccgggtgctcttactcaggtacgaggacctgct 24792309 Score = 159 bits (80), Expect = 3e-35 Identities = 170/200 (85%) Strand = Plus / Plus Query: 814 gttcatgggccggccgttctcgtccgccgaggagggcgccggagccgtggaggccgtggt 873 ||||||||| |||||||||||| |||||||||||| |||||| ||||| | | ||| || Sbjct: 24792352 gttcatggggcggccgttctcggccgccgaggaggccgccggcgccgtagcgagcgtcgt 24792411 Query: 874 ggagctgtgcagcttcgagaagatgaagggcctggaggtgaacaagaagggctcgtcggg 933 |||| ||||||||||||||| |||||||| |||||||||||| | |||| || |||| Sbjct: 24792412 ggagttgtgcagcttcgagaggatgaaggcgctggaggtgaaccggcggggcacggcggg 24792471 Query: 934 ggcgtaccacgccatgccccgcgacgccttcttcaggaaaggggtcgccggagactgggt 993 | ||||| | |||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 24792472 gtcgtacaagagcatgccgcgcgacgccttcttcaggaagggcgtcgccggcgactgggc 24792531 Query: 994 gaaccacatgacgccggaga 1013 |||||||||| ||||||||| Sbjct: 24792532 gaaccacatgtcgccggaga 24792551 Score = 107 bits (54), Expect = 1e-19 Identities = 118/138 (85%), Gaps = 6/138 (4%) Strand = Plus / Minus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 ||||||| ||| |||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 2550945 tcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttcgccacca 2550886 Query: 357 tgacgcgcgacgcgtacccg-gcgccg-----gcgcagcacccgctcctccgcctcaacc 410 || ||||| |||| ||||| ||||| | |||||||||||||||||| ||||||| Sbjct: 2550885 tggcgcgccgcgcgcacccgcccgccggggatgagcagcacccgctcctccggctcaacc 2550826 Query: 411 cgcacgactgcatcccgt 428 ||||||||||| |||||| Sbjct: 2550825 cgcacgactgcgtcccgt 2550808 Score = 83.8 bits (42), Expect = 1e-12 Identities = 81/94 (86%) Strand = Plus / Minus Query: 261 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 320 ||||||||||||||| || ||| ||| |||||| |||| || ||| |||||||||| Sbjct: 24853052 tccagcgccgcttcgagccgcgcgccggcgacgtcctcctggcgagcctgcccaagtgcg 24852993 Query: 321 gcaccacgtggctcaaggcgctggccttcgccac 354 ||||||||||||||||||| |||||||||||||| Sbjct: 24852992 gcaccacgtggctcaaggccctggccttcgccac 24852959 Score = 81.8 bits (41), Expect = 6e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccatgacgcg 363 ||||||||||||||||||||||||||||| || ||||||||||||||| |||| Sbjct: 2406825 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccaccatggcgcg 2406773 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 310 ccccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgc 369 |||||||||||||||||||||||||||||| || ||||||||| ||||| ||||| ||| Sbjct: 2542869 ccccaagtgcggcaccacgtggctcaaggccctcgccttcgcctccatggcgcgccgcgc 2542810 Query: 370 gtacccggcgccg 382 | ||||| ||||| Sbjct: 2542809 gcacccgccgccg 2542797 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 |||||||||||||| |||||||||||||||||| |||||||| |||| Sbjct: 2542760 cacccgctcctccggctcaacccgcacgactgcgtcccgttcatgga 2542714 Score = 63.9 bits (32), Expect = 1e-06 Identities = 71/84 (84%) Strand = Plus / Minus Query: 388 gcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttcgc 447 ||||||||| ||||| |||||||| ||||| ||| ||||||||||||| | ||||| | Sbjct: 24852910 gcacccgctgctccggctcaacccacacgagtgcgtcccgttcctggaggggatctactt 24852851 Query: 448 cgacgggcaggaggccaagctcga 471 |||| | |||||||||||||||| Sbjct: 24852850 ggacgaggaggaggccaagctcga 24852827 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 385 gcagcacccgctcctccgcctcaacccgcacgac 418 |||||| ||||||||||||||||||||||||||| Sbjct: 2406737 gcagcatccgctcctccgcctcaacccgcacgac 2406704 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 146 gaggagttcggggacctcgtcgcagcgctgccgcg 180 ||||||||||| ||||||||||| ||||||||||| Sbjct: 24791681 gaggagttcggcgacctcgtcgcggcgctgccgcg 24791715 Score = 42.1 bits (21), Expect = 4.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 881 tgcagcttcgagaagatgaagggcctggaggtgaaca 917 ||||| |||||| |||||||| |||||||||||||| Sbjct: 2549690 tgcagtttcgagcagatgaagaacctggaggtgaaca 2549654
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 281 bits (142), Expect = 3e-72 Identities = 424/515 (82%), Gaps = 6/515 (1%) Strand = Plus / Plus Query: 266 cgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcacc 325 ||||||||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 26249 cgccgcttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcacc 26308 Query: 326 acgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccggcg 385 ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | || Sbjct: 26309 acgtggctcaaggcgctggccttcgccgccatgacccgcgccgcctacccggcg--gacg 26366 Query: 386 cagcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttc 445 | |||||||| ||||||||||||||||||||| |||||||||| | || || ||||| Sbjct: 26367 aa-cacccgctgctccgcctcaacccgcacgacgtcatcccgttcgtcgaggacgtcttc 26425 Query: 446 gccgacgggcaggaggccaagctcgagaagctcccgtcgccgcgcctcatgaacacgcac 505 ||||||| || |||||||||||||| | |||||| |||||||||||||| ||||||||| Sbjct: 26426 accgacggccacgaggccaagctcgacatgctcccctcgccgcgcctcatcaacacgcac 26485 Query: 506 atgccgtacaccctgctccccgagtcg---gtcaccggcgccgccgtcgccggctgcaag 562 | ||||||| || ||||| |||||| ||| |||||| || || || ||| |||||| Sbjct: 26486 acgccgtaccagcttctcccggagtcggtcgtcgccggcgacggcggcggcggatgcaag 26545 Query: 563 gtggcgtacgtctgtagggaccccaaggacatggtcgtctccctgtggcacttcctccgg 622 || | ||| |||| ||||||||||||||||||||||| || |||| |||||| | ||| Sbjct: 26546 gtcgtctacatctgcagggaccccaaggacatggtcgtgtcgctgtaccacttcatgcgg 26605 Query: 623 cgccggcagcccgacctcccgttcgccgagctgttcgagcacgtctgcgacggtgccgtg 682 |||| ||||||||||| || |||||| || | ||| |||| |||||| | ||| Sbjct: 26606 cgcctccagcccgacctgtcgctcgccggcgtggtggagtccgtcgccgacggcacggtg 26665 Query: 683 gccgtcggcccgatctgggaccacgtgctcacctactggcacgcgagcgtcgcgcggcca 742 | |||| ||||| ||||||||| | ||| |||||||| ||||||||| | || || Sbjct: 26666 ccgttcgggccgatgtgggaccacatcctcggctactggcgggcgagcgtctcccgcccg 26725 Query: 743 gacagggtgctcttcctcaagtacgaggacctgct 777 ||| |||||||||| |||| ||||||||||||||| Sbjct: 26726 gaccgggtgctcttactcaggtacgaggacctgct 26760 Score = 159 bits (80), Expect = 3e-35 Identities = 170/200 (85%) Strand = Plus / Plus Query: 814 gttcatgggccggccgttctcgtccgccgaggagggcgccggagccgtggaggccgtggt 873 ||||||||| |||||||||||| |||||||||||| |||||| ||||| | | ||| || Sbjct: 26803 gttcatggggcggccgttctcggccgccgaggaggccgccggcgccgtagcgagcgtcgt 26862 Query: 874 ggagctgtgcagcttcgagaagatgaagggcctggaggtgaacaagaagggctcgtcggg 933 |||| ||||||||||||||| |||||||| |||||||||||| | |||| || |||| Sbjct: 26863 ggagttgtgcagcttcgagaggatgaaggcgctggaggtgaaccggcggggcacggcggg 26922 Query: 934 ggcgtaccacgccatgccccgcgacgccttcttcaggaaaggggtcgccggagactgggt 993 | ||||| | |||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 26923 gtcgtacaagagcatgccgcgcgacgccttcttcaggaagggcgtcgccggcgactgggc 26982 Query: 994 gaaccacatgacgccggaga 1013 |||||||||| ||||||||| Sbjct: 26983 gaaccacatgtcgccggaga 27002 Score = 83.8 bits (42), Expect = 1e-12 Identities = 81/94 (86%) Strand = Plus / Minus Query: 261 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 320 ||||||||||||||| || ||| ||| |||||| |||| || ||| |||||||||| Sbjct: 87503 tccagcgccgcttcgagccgcgcgccggcgacgtcctcctggcgagcctgcccaagtgcg 87444 Query: 321 gcaccacgtggctcaaggcgctggccttcgccac 354 ||||||||||||||||||| |||||||||||||| Sbjct: 87443 gcaccacgtggctcaaggccctggccttcgccac 87410 Score = 63.9 bits (32), Expect = 1e-06 Identities = 71/84 (84%) Strand = Plus / Minus Query: 388 gcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttcgc 447 ||||||||| ||||| |||||||| ||||| ||| ||||||||||||| | ||||| | Sbjct: 87361 gcacccgctgctccggctcaacccacacgagtgcgtcccgttcctggaggggatctactt 87302 Query: 448 cgacgggcaggaggccaagctcga 471 |||| | |||||||||||||||| Sbjct: 87301 ggacgaggaggaggccaagctcga 87278 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 146 gaggagttcggggacctcgtcgcagcgctgccgcg 180 ||||||||||| ||||||||||| ||||||||||| Sbjct: 26132 gaggagttcggcgacctcgtcgcggcgctgccgcg 26166
>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full insert sequence Length = 1369 Score = 281 bits (142), Expect = 3e-72 Identities = 424/515 (82%), Gaps = 6/515 (1%) Strand = Plus / Plus Query: 266 cgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcacc 325 ||||||||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 271 cgccgcttcacgccgcgcgccgacgacgtggtccttgccagctaccccaagtgcggcacc 330 Query: 326 acgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccggcgccggcg 385 ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | || Sbjct: 331 acgtggctcaaggcgctggccttcgccgccatgacccgcgccgcctacccggcg--gacg 388 Query: 386 cagcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttc 445 | |||||||| ||||||||||||||||||||| |||||||||| | || || ||||| Sbjct: 389 aa-cacccgctgctccgcctcaacccgcacgacgtcatcccgttcgtcgaggacgtcttc 447 Query: 446 gccgacgggcaggaggccaagctcgagaagctcccgtcgccgcgcctcatgaacacgcac 505 ||||||| || |||||||||||||| | |||||| |||||||||||||| ||||||||| Sbjct: 448 accgacggccacgaggccaagctcgacatgctcccctcgccgcgcctcatcaacacgcac 507 Query: 506 atgccgtacaccctgctccccgagtcg---gtcaccggcgccgccgtcgccggctgcaag 562 | ||||||| || ||||| |||||| ||| |||||| || || || ||| |||||| Sbjct: 508 acgccgtaccagcttctcccggagtcggtcgtcgccggcgacggcggcggcggatgcaag 567 Query: 563 gtggcgtacgtctgtagggaccccaaggacatggtcgtctccctgtggcacttcctccgg 622 || | ||| |||| ||||||||||||||||||||||| || |||| |||||| | ||| Sbjct: 568 gtcgtctacatctgcagggaccccaaggacatggtcgtgtcgctgtaccacttcatgcgg 627 Query: 623 cgccggcagcccgacctcccgttcgccgagctgttcgagcacgtctgcgacggtgccgtg 682 |||| ||||||||||| || |||||| || | ||| |||| |||||| | ||| Sbjct: 628 cgcctccagcccgacctgtcgctcgccggcgtggtggagtccgtcgccgacggcacggtg 687 Query: 683 gccgtcggcccgatctgggaccacgtgctcacctactggcacgcgagcgtcgcgcggcca 742 | |||| ||||| ||||||||| | ||| |||||||| ||||||||| | || || Sbjct: 688 ccgttcgggccgatgtgggaccacatcctcggctactggcgggcgagcgtctcccgcccg 747 Query: 743 gacagggtgctcttcctcaagtacgaggacctgct 777 ||| |||||||||| |||| ||||||||||||||| Sbjct: 748 gaccgggtgctcttactcaggtacgaggacctgct 782 Score = 159 bits (80), Expect = 3e-35 Identities = 170/200 (85%) Strand = Plus / Plus Query: 814 gttcatgggccggccgttctcgtccgccgaggagggcgccggagccgtggaggccgtggt 873 ||||||||| |||||||||||| |||||||||||| |||||| ||||| | | ||| || Sbjct: 825 gttcatggggcggccgttctcggccgccgaggaggccgccggcgccgtagcgagcgtcgt 884 Query: 874 ggagctgtgcagcttcgagaagatgaagggcctggaggtgaacaagaagggctcgtcggg 933 |||| ||||||||||||||| |||||||| |||||||||||| | |||| || |||| Sbjct: 885 ggagttgtgcagcttcgagaggatgaaggcgctggaggtgaaccggcggggcacggcggg 944 Query: 934 ggcgtaccacgccatgccccgcgacgccttcttcaggaaaggggtcgccggagactgggt 993 | ||||| | |||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 945 gtcgtacaagagcatgccgcgcgacgccttcttcaggaagggcgtcgccggcgactgggc 1004 Query: 994 gaaccacatgacgccggaga 1013 |||||||||| ||||||||| Sbjct: 1005 gaaccacatgtcgccggaga 1024 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 146 gaggagttcggggacctcgtcgcagcgctgccgcg 180 ||||||||||| ||||||||||| ||||||||||| Sbjct: 154 gaggagttcggcgacctcgtcgcggcgctgccgcg 188
>gb|AY106554.1| Zea mays PCO133039 mRNA sequence Length = 474 Score = 194 bits (98), Expect = 5e-46 Identities = 219/258 (84%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 92 cctgttccgttcacggacgtcgacgacggcacggtgccgaagcgcccagccaaagaggag 151 ||||| ||||||| ||||||||||||||||| || || ||| | | |||| |||||| Sbjct: 91 cctgtgccgttcaaggacgtcgacgacggcagtgttccagagcacactcccaaggaggag 150 Query: 152 ttcggggacctcgtcgcagcgctgccgcgcaagcatcaggccggcctggagctgcggctg 211 ||||| |||||||| || ||||||||| ||| ||| ||| || |||||||||||| ||| Sbjct: 151 ttcggcgacctcgtggccgcgctgccgagcaggcagcagtccatcctggagctgcgcctg 210 Query: 212 taccaggggttctggcttcccgaccactgggtcgcgggcacagtcgtcttccagcgccgc 271 |||||||| |||||||| || || |||||||| |||| || |||| |||||||||||| Sbjct: 211 taccagggcttctggctgccggagcactgggtgccggggaccatcgtgttccagcgccgc 270 Query: 272 ttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgt-g 330 ||| | || ||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 271 ttcacgccgcgccccgacgacgtgatcctcgcgagctaccccaagtgcggcaccacgtgg 330 Query: 331 gctcaaggcgctggcctt 348 ||| || ||||||||||| Sbjct: 331 gctgaaagcgctggcctt 348
>emb|CT837574.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA030N04, full insert sequence Length = 837 Score = 119 bits (60), Expect = 3e-23 Identities = 102/116 (87%) Strand = Plus / Plus Query: 261 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 320 ||||||||||||||||||| ||| || ||||||| ||||||||||| |||||||||| Sbjct: 292 tccagcgccgcttcgccccgcgcgacggcgacgtggtcctcgccagcctgcccaagtgcg 351 Query: 321 gcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtacccg 376 ||||||||||||||||||| |||||||||||||| | |||||| |||||||||| Sbjct: 352 gcaccacgtggctcaaggccctggccttcgccacggcggcgcgcgccgcgtacccg 407 Score = 56.0 bits (28), Expect = 3e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 388 gcacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||| ||| | |||||||||||||||||| |||||||| |||| Sbjct: 449 gcacccgctgctcaggctcaacccgcacgactgcgtcccgttcatgga 496
>ref|NM_001065428.1| Oryza sativa (japonica cultivar-group) Os07g0148600 (Os07g0148600) mRNA, complete cds Length = 1062 Score = 107 bits (54), Expect = 1e-19 Identities = 118/138 (85%), Gaps = 6/138 (4%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 ||||||| ||| |||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 251 tcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttcgccacca 310 Query: 357 tgacgcgcgacgcgtacccg-gcgccg-----gcgcagcacccgctcctccgcctcaacc 410 || ||||| |||| ||||| ||||| | |||||||||||||||||| ||||||| Sbjct: 311 tggcgcgccgcgcgcacccgcccgccggggatgagcagcacccgctcctccggctcaacc 370 Query: 411 cgcacgactgcatcccgt 428 ||||||||||| |||||| Sbjct: 371 cgcacgactgcgtcccgt 388 Score = 42.1 bits (21), Expect = 4.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 881 tgcagcttcgagaagatgaagggcctggaggtgaaca 917 ||||| |||||| |||||||| |||||||||||||| Sbjct: 838 tgcagtttcgagcagatgaagaacctggaggtgaaca 874
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 107 bits (54), Expect = 1e-19 Identities = 118/138 (85%), Gaps = 6/138 (4%) Strand = Plus / Minus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 ||||||| ||| |||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 115925 tcctcgcgagcctccccaagtgcggcaccacgtggctcaaggccctcgcgttcgccacca 115866 Query: 357 tgacgcgcgacgcgtacccg-gcgccg-----gcgcagcacccgctcctccgcctcaacc 410 || ||||| |||| ||||| ||||| | |||||||||||||||||| ||||||| Sbjct: 115865 tggcgcgccgcgcgcacccgcccgccggggatgagcagcacccgctcctccggctcaacc 115806 Query: 411 cgcacgactgcatcccgt 428 ||||||||||| |||||| Sbjct: 115805 cgcacgactgcgtcccgt 115788 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 310 ccccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgc 369 |||||||||||||||||||||||||||||| || ||||||||| ||||| ||||| ||| Sbjct: 107849 ccccaagtgcggcaccacgtggctcaaggccctcgccttcgcctccatggcgcgccgcgc 107790 Query: 370 gtacccggcgccg 382 | ||||| ||||| Sbjct: 107789 gcacccgccgccg 107777 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 |||||||||||||| |||||||||||||||||| |||||||| |||| Sbjct: 107740 cacccgctcctccggctcaacccgcacgactgcgtcccgttcatgga 107694 Score = 42.1 bits (21), Expect = 4.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 881 tgcagcttcgagaagatgaagggcctggaggtgaaca 917 ||||| |||||| |||||||| |||||||||||||| Sbjct: 114670 tgcagtttcgagcagatgaagaacctggaggtgaaca 114634
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 101 bits (51), Expect = 6e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 261 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 320 ||||||||| ||||||||| ||| || ||||||| ||||||| ||| |||||||||| Sbjct: 34483 tccagcgccacttcgccccgcgcgacggcgacgtggtcctcgcgagcctgcccaagtgcg 34424 Query: 321 gcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtaccc 375 ||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 34423 gcaccacgtggctcaaggccctggccttcgccacggcggcgcgcgccgcgtaccc 34369 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 388 gcacccgctcctccgcctcaacccgcacgactgcatcccgttc 430 ||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 34337 gcacccgctgctccatctcaacccgcacgactgcgtcccgttc 34295
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 101 bits (51), Expect = 6e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 261 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 320 ||||||||| ||||||||| ||| || ||||||| ||||||| ||| |||||||||| Sbjct: 8623317 tccagcgccacttcgccccgcgcgacggcgacgtggtcctcgcgagcctgcccaagtgcg 8623258 Query: 321 gcaccacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgtaccc 375 ||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 8623257 gcaccacgtggctcaaggccctggccttcgccacggcggcgcgcgccgcgtaccc 8623203 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 17387005 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 17387064 Query: 357 t 357 | Sbjct: 17387065 t 17387065 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 351 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 17345390 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 17345444 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccat 357 ||||||| ||||||||| |||||||||||||| |||||||| ||||| Sbjct: 17354657 cccaagtccggcaccacctggctcaaggcgcttgccttcgcgaccat 17354703 Score = 58.0 bits (29), Expect = 8e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 961 cttcttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcgac 1020 ||||||| ||| |||||| ||||| |||||| ||||||||| |||||||||||||| | Sbjct: 17387798 cttcttccggagaggggtggccggcgactggagcaaccacatgtcgccggagatggcgtc 17387857 Query: 1021 ccggctgga 1029 |||||||| Sbjct: 17387858 gcggctgga 17387866 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 1892880 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 1892838 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 388 gcacccgctcctccgcctcaacccgcacgactgcatcccgttc 430 ||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 8623171 gcacccgctgctccatctcaacccgcacgactgcgtcccgttc 8623129 Score = 48.1 bits (24), Expect = 0.078 Identities = 36/40 (90%) Strand = Plus / Plus Query: 795 acgtgaggaggctggcggagttcatgggccggccgttctc 834 ||||||||| |||||| |||||||||||| | |||||||| Sbjct: 17346471 acgtgaggaagctggccgagttcatgggctgcccgttctc 17346510 Score = 44.1 bits (22), Expect = 1.2 Identities = 40/46 (86%) Strand = Plus / Minus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 ||||| ||| || |||||||| | ||||||| |||||||||||||| Sbjct: 1895036 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 1894991
>ref|NM_001068768.1| Oryza sativa (japonica cultivar-group) Os08g0515100 (Os08g0515100) mRNA, complete cds Length = 972 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 272 ttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtgg 331 ||||| || ||||||||||||||| ||||||||| |||||| |||||||||||||| ||| Sbjct: 193 ttcgcgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcaccacctgg 252 Query: 332 ctcaaggcgct 342 ||||||||||| Sbjct: 253 ctcaaggcgct 263 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 748 ggtgctcttcctcaagtacga 768 ||||||||||||||||||||| Sbjct: 639 ggtgctcttcctcaagtacga 659
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Minus Query: 272 ttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtgg 331 ||||| || ||||||||||||||| ||||||||| |||||| |||||||||||||| ||| Sbjct: 25560384 ttcgcgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcaccacctgg 25560325 Query: 332 ctcaaggcgct 342 ||||||||||| Sbjct: 25560324 ctcaaggcgct 25560314 Score = 87.7 bits (44), Expect = 9e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 286 cgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggc 345 |||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||| | Sbjct: 25558002 cgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctc 25557943 Query: 346 cttcgcca 353 |||||||| Sbjct: 25557942 cttcgcca 25557935 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 281 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcg 340 ||||||||||| ||| ||||||||| |||||| |||||||||||||| |||||||||| | Sbjct: 25528323 cgccccgacgatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtg 25528264 Query: 341 ctggccttcgcca 353 || ||||||||| Sbjct: 25528263 ctctccttcgcca 25528251 Score = 79.8 bits (40), Expect = 2e-11 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Minus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 8468981 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 8468922 Query: 357 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 410 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 8468921 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 8468862 Query: 411 cgcacgactgc 421 ||||||||||| Sbjct: 8468861 cgcacgactgc 8468851 Score = 58.0 bits (29), Expect = 8e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||||| |||||||||||||||||||||| Sbjct: 8458981 cacccgctccgccgcctcaacccgcacgactgc 8459013 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 323 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 371 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 12059971 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 12060019 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 323 accacgtggctcaaggcgctggccttcgccaccatgacgcgcg 365 ||||||||||||||||| || || |||||||||||| |||||| Sbjct: 10720099 accacgtggctcaaggccctcgcgttcgccaccatggcgcgcg 10720057 Score = 48.1 bits (24), Expect = 0.078 Identities = 33/36 (91%) Strand = Plus / Minus Query: 579 gggaccccaaggacatggtcgtctccctgtggcact 614 |||| ||||||||| | ||||||||||||||||||| Sbjct: 25528039 gggagcccaaggacgtcgtcgtctccctgtggcact 25528004 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgca 414 |||||||||| ||||||||||||||| Sbjct: 12060040 cacccgctccgccgcctcaacccgca 12060065 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 743 gacagggtgctcttcctcaagtacga 768 |||| ||||||||||||||||||||| Sbjct: 25527861 gacatggtgctcttcctcaagtacga 25527836 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 748 ggtgctcttcctcaagtacga 768 ||||||||||||||||||||| Sbjct: 25559934 ggtgctcttcctcaagtacga 25559914
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Minus Query: 272 ttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtgg 331 ||||| || ||||||||||||||| ||||||||| |||||| |||||||||||||| ||| Sbjct: 47075 ttcgcgccgcgccccgacgacgtgctcctcgccacctacccaaagtgcggcaccacctgg 47016 Query: 332 ctcaaggcgct 342 ||||||||||| Sbjct: 47015 ctcaaggcgct 47005 Score = 87.7 bits (44), Expect = 9e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 286 cgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggc 345 |||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||| | Sbjct: 44693 cgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctc 44634 Query: 346 cttcgcca 353 |||||||| Sbjct: 44633 cttcgcca 44626 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 281 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcg 340 ||||||||||| ||| ||||||||| |||||| |||||||||||||| |||||||||| | Sbjct: 15014 cgccccgacgatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtg 14955 Query: 341 ctggccttcgcca 353 || ||||||||| Sbjct: 14954 ctctccttcgcca 14942 Score = 48.1 bits (24), Expect = 0.078 Identities = 33/36 (91%) Strand = Plus / Minus Query: 579 gggaccccaaggacatggtcgtctccctgtggcact 614 |||| ||||||||| | ||||||||||||||||||| Sbjct: 14730 gggagcccaaggacgtcgtcgtctccctgtggcact 14695 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 743 gacagggtgctcttcctcaagtacga 768 |||| ||||||||||||||||||||| Sbjct: 14552 gacatggtgctcttcctcaagtacga 14527 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 748 ggtgctcttcctcaagtacga 768 ||||||||||||||||||||| Sbjct: 46625 ggtgctcttcctcaagtacga 46605
>ref|NM_001070809.1| Oryza sativa (japonica cultivar-group) Os10g0190100 (Os10g0190100) mRNA, complete cds Length = 1232 Score = 87.7 bits (44), Expect = 9e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacc 355 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 291 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgccacc 346 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||||||||||| ||||||||||| ||| |||||||| |||| Sbjct: 410 cacccgctcctccgccttaacccgcacgagtgcgtcccgttcttgga 456 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 875 gagctgtgcagcttcgagaagatgaagg 902 |||||||||||||| ||||||||||||| Sbjct: 896 gagctgtgcagctttgagaagatgaagg 923
>ref|NM_001068767.1| Oryza sativa (japonica cultivar-group) Os08g0515000 (Os08g0515000) mRNA, complete cds Length = 999 Score = 87.7 bits (44), Expect = 9e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 286 cgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggc 345 |||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||| | Sbjct: 198 cgacgacgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggcgctctc 257 Query: 346 cttcgcca 353 |||||||| Sbjct: 258 cttcgcca 265
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 87.7 bits (44), Expect = 9e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacc 355 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 19406 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgccacc 19461 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||||||||||| ||||||||||| ||| |||||||| |||| Sbjct: 19525 cacccgctcctccgccttaacccgcacgagtgcgtcccgttcttgga 19571 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 875 gagctgtgcagcttcgagaagatgaagg 902 |||||||||||||| ||||||||||||| Sbjct: 21123 gagctgtgcagctttgagaagatgaagg 21150
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 87.7 bits (44), Expect = 9e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacc 355 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5904477 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgccacc 5904422 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||||||||||| ||||||||||| ||| |||||||| |||| Sbjct: 5904358 cacccgctcctccgccttaacccgcacgagtgcgtcccgttcttgga 5904312 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Minus Query: 875 gagctgtgcagcttcgagaagatgaagg 902 |||||||||||||| ||||||||||||| Sbjct: 5902760 gagctgtgcagctttgagaagatgaagg 5902733
>dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L15, full insert sequence Length = 1243 Score = 87.7 bits (44), Expect = 9e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacc 355 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 302 tcgccagcctccccaagtgcggcaccacgtggctcaaggccctggccttcgccacc 357 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||||||||||| ||||||||||| ||| |||||||| |||| Sbjct: 421 cacccgctcctccgccttaacccgcacgagtgcgtcccgttcttgga 467 Score = 48.1 bits (24), Expect = 0.078 Identities = 27/28 (96%) Strand = Plus / Plus Query: 875 gagctgtgcagcttcgagaagatgaagg 902 |||||||||||||| ||||||||||||| Sbjct: 907 gagctgtgcagctttgagaagatgaagg 934
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 83.8 bits (42), Expect = 1e-12 Identities = 81/94 (86%) Strand = Plus / Minus Query: 261 tccagcgccgcttcgccccacgccccgacgacgtgatcctcgccagctaccccaagtgcg 320 ||||||||||||||| || ||| ||| |||||| |||| || ||| |||||||||| Sbjct: 36684 tccagcgccgcttcgagccgcgcgccggcgacgtcctcctggcgagcctgcccaagtgcg 36625 Query: 321 gcaccacgtggctcaaggcgctggccttcgccac 354 ||||||||||||||||||| |||||||||||||| Sbjct: 36624 gcaccacgtggctcaaggccctggccttcgccac 36591 Score = 63.9 bits (32), Expect = 1e-06 Identities = 71/84 (84%) Strand = Plus / Minus Query: 388 gcacccgctcctccgcctcaacccgcacgactgcatcccgttcctggacgagatcttcgc 447 ||||||||| ||||| |||||||| ||||| ||| ||||||||||||| | ||||| | Sbjct: 36542 gcacccgctgctccggctcaacccacacgagtgcgtcccgttcctggaggggatctactt 36483 Query: 448 cgacgggcaggaggccaagctcga 471 |||| | |||||||||||||||| Sbjct: 36482 ggacgaggaggaggccaagctcga 36459
>ref|NM_001074482.1| Oryza sativa (japonica cultivar-group) Os11g0505200 (Os11g0505200) mRNA, complete cds Length = 1222 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 992 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 933 Query: 357 t 357 | Sbjct: 932 t 932 Score = 58.0 bits (29), Expect = 8e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 961 cttcttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcgac 1020 ||||||| ||| |||||| ||||| |||||| ||||||||| |||||||||||||| | Sbjct: 199 cttcttccggagaggggtggccggcgactggagcaaccacatgtcgccggagatggcgtc 140 Query: 1021 ccggctgga 1029 |||||||| Sbjct: 139 gcggctgga 131
>ref|NM_001074481.1| Oryza sativa (japonica cultivar-group) Os11g0505300 (Os11g0505300) mRNA, complete cds Length = 1131 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 200 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 259 Query: 357 t 357 | Sbjct: 260 t 260 Score = 58.0 bits (29), Expect = 8e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 961 cttcttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcgac 1020 ||||||| ||| |||||| ||||| |||||| ||||||||| |||||||||||||| | Sbjct: 993 cttcttccggagaggggtggccggcgactggagcaaccacatgtcgccggagatggcgtc 1052 Query: 1021 ccggctgga 1029 |||||||| Sbjct: 1053 gcggctgga 1061
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 115787 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 115846 Query: 357 t 357 | Sbjct: 115847 t 115847 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 351 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 74321 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 74375 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccat 357 ||||||| ||||||||| |||||||||||||| |||||||| ||||| Sbjct: 83588 cccaagtccggcaccacctggctcaaggcgcttgccttcgcgaccat 83634 Score = 58.0 bits (29), Expect = 8e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 961 cttcttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcgac 1020 ||||||| ||| |||||| ||||| |||||| ||||||||| |||||||||||||| | Sbjct: 116580 cttcttccggagaggggtggccggcgactggagcaaccacatgtcgccggagatggcgtc 116639 Query: 1021 ccggctgga 1029 |||||||| Sbjct: 116640 gcggctgga 116648 Score = 48.1 bits (24), Expect = 0.078 Identities = 36/40 (90%) Strand = Plus / Plus Query: 795 acgtgaggaggctggcggagttcatgggccggccgttctc 834 ||||||||| |||||| |||||||||||| | |||||||| Sbjct: 75402 acgtgaggaagctggccgagttcatgggctgcccgttctc 75441
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 141780 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 141839 Query: 357 t 357 | Sbjct: 141840 t 141840 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 351 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 100314 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 100368 Score = 61.9 bits (31), Expect = 5e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccat 357 ||||||| ||||||||| |||||||||||||| |||||||| ||||| Sbjct: 109581 cccaagtccggcaccacctggctcaaggcgcttgccttcgcgaccat 109627 Score = 58.0 bits (29), Expect = 8e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 961 cttcttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcgac 1020 ||||||| ||| |||||| ||||| |||||| ||||||||| |||||||||||||| | Sbjct: 142573 cttcttccggagaggggtggccggcgactggagcaaccacatgtcgccggagatggcgtc 142632 Query: 1021 ccggctgga 1029 |||||||| Sbjct: 142633 gcggctgga 142641 Score = 48.1 bits (24), Expect = 0.078 Identities = 36/40 (90%) Strand = Plus / Plus Query: 795 acgtgaggaggctggcggagttcatgggccggccgttctc 834 ||||||||| |||||| |||||||||||| | |||||||| Sbjct: 101395 acgtgaggaagctggccgagttcatgggctgcccgttctc 101434
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 81.8 bits (41), Expect = 6e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctggccttcgccaccatgacgcg 363 ||||||||||||||||||||||||||||| || ||||||||||||||| |||| Sbjct: 109833 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccaccatggcgcg 109781 Score = 60.0 bits (30), Expect = 2e-05 Identities = 33/34 (97%) Strand = Plus / Minus Query: 385 gcagcacccgctcctccgcctcaacccgcacgac 418 |||||| ||||||||||||||||||||||||||| Sbjct: 109745 gcagcatccgctcctccgcctcaacccgcacgac 109712
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 281 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcg 340 ||||||||||| ||| ||||||||| |||||| |||||||||||||| |||||||||| | Sbjct: 159639 cgccccgacgatgtgctcctcgccacctacccaaagtgcggcaccacctggctcaaggtg 159580 Query: 341 ctggccttcgcca 353 || ||||||||| Sbjct: 159579 ctctccttcgcca 159567 Score = 48.1 bits (24), Expect = 0.078 Identities = 33/36 (91%) Strand = Plus / Minus Query: 579 gggaccccaaggacatggtcgtctccctgtggcact 614 |||| ||||||||| | ||||||||||||||||||| Sbjct: 159355 gggagcccaaggacgtcgtcgtctccctgtggcact 159320 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 743 gacagggtgctcttcctcaagtacga 768 |||| ||||||||||||||||||||| Sbjct: 159177 gacatggtgctcttcctcaagtacga 159152
>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full insert sequence Length = 1222 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| |||| Sbjct: 231 tcctcgccagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgcaacca 290 Query: 357 t 357 | Sbjct: 291 t 291 Score = 58.0 bits (29), Expect = 8e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 961 cttcttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcgac 1020 ||||||| ||| |||||| ||||| |||||| ||||||||| |||||||||||||| | Sbjct: 1024 cttcttccggagaggggtggccggcgactggagcaaccacatgtcgccggagatggcgtc 1083 Query: 1021 ccggctgga 1029 |||||||| Sbjct: 1084 gcggctgga 1092
>ref|NM_001067866.1| Oryza sativa (japonica cultivar-group) Os08g0240000 (Os08g0240000) mRNA, complete cds Length = 1234 Score = 79.8 bits (40), Expect = 2e-11 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 266 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 325 Query: 357 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 410 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 326 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 385 Query: 411 cgcacgactgc 421 ||||||||||| Sbjct: 386 cgcacgactgc 396
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 79.8 bits (40), Expect = 2e-11 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Minus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 84698 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 84639 Query: 357 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 410 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 84638 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 84579 Query: 411 cgcacgactgc 421 ||||||||||| Sbjct: 84578 cgcacgactgc 84568 Score = 58.0 bits (29), Expect = 8e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||||| |||||||||||||||||||||| Sbjct: 74698 cacccgctccgccgcctcaacccgcacgactgc 74730
>dbj|AK099021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124F24, full insert sequence Length = 1209 Score = 79.8 bits (40), Expect = 2e-11 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 268 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 327 Query: 357 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 410 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 328 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 387 Query: 411 cgcacgactgc 421 ||||||||||| Sbjct: 388 cgcacgactgc 398
>dbj|AK061204.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B05, full insert sequence Length = 1234 Score = 79.8 bits (40), Expect = 2e-11 Identities = 108/131 (82%), Gaps = 6/131 (4%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccacca 356 ||||||||||| |||||||| || || |||||||||||||| || || |||||||||| Sbjct: 266 tcctcgccagcctccccaagtcggggacgacgtggctcaaggcactcgcgttcgccacca 325 Query: 357 tgacgcgcgacgcgtacccggcgccggcg------cagcacccgctcctccgcctcaacc 410 || ||||| ||||| |||| |||||||| | |||||||||| ||||||||||| Sbjct: 326 tggcgcgccgcgcgtgcccgccgccggcgagccccgaccacccgctccgccgcctcaacc 385 Query: 411 cgcacgactgc 421 ||||||||||| Sbjct: 386 cgcacgactgc 396
>emb|CT835891.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN018F08, full insert sequence Length = 1428 Score = 75.8 bits (38), Expect = 3e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 287 gacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcc 346 |||| |||| |||||||||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 336 gacggcgtgctcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgcc 395 Query: 347 ttcgcc 352 |||||| Sbjct: 396 ttcgcc 401 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 964 cttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcg 1018 ||||||| |||| |||||||| |||||| |||||||||||||||| ||||||| Sbjct: 1049 cttcagggaaggtgtcgccggcgactggcgcaaccacatgacgccggcgatggcg 1103 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||||| ||| | |||||||||||||||| Sbjct: 441 cacccgctccgccgtcgcaacccgcacgactgc 473
>ref|NM_001070423.1| Oryza sativa (japonica cultivar-group) Os09g0555100 (Os09g0555100) mRNA, complete cds Length = 2052 Score = 73.8 bits (37), Expect = 1e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 292 cgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 351 |||| |||||||||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 1158 cgtgctcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgc 1217 Query: 352 c 352 | Sbjct: 1218 c 1218 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 964 cttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcg 1018 |||||||||||| |||||||| |||||| |||||||||||||||| ||||||| Sbjct: 1866 cttcaggaaaggtgtcgccggcgactggcgcaaccacatgacgccggcgatggcg 1920 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||||| ||| | |||||||||||||||| Sbjct: 1258 cacccgctccgccgtcgcaacccgcacgactgc 1290
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 73.8 bits (37), Expect = 1e-09 Identities = 184/228 (80%), Gaps = 5/228 (2%) Strand = Plus / Plus Query: 287 gacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcc 346 |||||||| ||| ||||||||| ||||||| ||||||||| ||||| || || || | Sbjct: 284858 gacgacgtcatcgtcgccagctttcccaagtccggcaccacttggcttaacgcccttact 284917 Query: 347 ttcgccaccatgacgcgcgacgcgtacccggc-gccggcgcag--cacccgctcctccgc 403 |||||||||||| |||| | | |||| || |||||||| | |||||||| | ||| Sbjct: 284918 ttcgccaccatggcgcggcgcactaacccagccgccggcgccggccacccgctgttacgc 284977 Query: 404 ctcaacccgcacgactgcatcccgttcctggacgagatcttcgccgacgggca-ggaggc 462 |||||||||||| | |||||||| ||||||||| | ||||| | || ||| |||||| Sbjct: 284978 ctcaacccgcaccagtgcatccctttcctggacaaactcttc-cagagctgcacggaggc 285036 Query: 463 caagctcgagaagctcccgtcgccgcgcctcatgaacacgcacatgcc 510 |||||||||| ||| ||||| |||||||||||||| ||||||||||| Sbjct: 285037 caagctcgaggcgctgccgtccccgcgcctcatgaatacgcacatgcc 285084 Score = 71.9 bits (36), Expect = 5e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 557 tgcaaggtggcgtacgtctgtagggaccccaaggacatggtcgtctccctgtggcacttc 616 |||||||| | |||| |||| ||||| ||||||||||||||| |||| | |||||||||| Sbjct: 285116 tgcaaggtcgtgtacatctgcagggagcccaaggacatggtcatctcgcagtggcacttc 285175 Query: 617 ctccggcg 624 |||||||| Sbjct: 285176 ctccggcg 285183
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 73.8 bits (37), Expect = 1e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 292 cgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 351 |||| |||||||||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 58703 cgtgctcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgc 58762 Query: 352 c 352 | Sbjct: 58763 c 58763 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 964 cttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcg 1018 |||||||||||| |||||||| |||||| |||||||||||||||| ||||||| Sbjct: 59411 cttcaggaaaggtgtcgccggcgactggcgcaaccacatgacgccggcgatggcg 59465 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||||| ||| | |||||||||||||||| Sbjct: 58803 cacccgctccgccgtcgcaacccgcacgactgc 58835
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 73.8 bits (37), Expect = 1e-09 Identities = 55/61 (90%) Strand = Plus / Plus Query: 292 cgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 351 |||| |||||||||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 21712683 cgtgctcctcgccagcttccccaagtccggcaccagctggctcaaggcgctcgccttcgc 21712742 Query: 352 c 352 | Sbjct: 21712743 c 21712743 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 964 cttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggcg 1018 |||||||||||| |||||||| |||||| |||||||||||||||| ||||||| Sbjct: 21713391 cttcaggaaaggtgtcgccggcgactggcgcaaccacatgacgccggcgatggcg 21713445 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||||| ||| | |||||||||||||||| Sbjct: 21712783 cacccgctccgccgtcgcaacccgcacgactgc 21712815
>ref|NM_001074479.1| Oryza sativa (japonica cultivar-group) Os11g0503900 (Os11g0503900) mRNA, complete cds Length = 1225 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 351 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 256 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 310 Score = 48.1 bits (24), Expect = 0.078 Identities = 36/40 (90%) Strand = Plus / Plus Query: 795 acgtgaggaggctggcggagttcatgggccggccgttctc 834 ||||||||| |||||| |||||||||||| | |||||||| Sbjct: 745 acgtgaggaagctggccgagttcatgggctgcccgttctc 784
>ref|NM_001063834.1| Oryza sativa (japonica cultivar-group) Os06g0252800 (Os06g0252800) mRNA, partial cds Length = 1258 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 281 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctca 335 |||||||||||||| ||| | |||||| |||||||||||||||||||||||||| Sbjct: 272 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 326 Score = 65.9 bits (33), Expect = 3e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 986 gactgggtgaaccacatgacgccggagatggcg 1018 ||||||||||||||||||||||||||||||||| Sbjct: 1030 gactgggtgaaccacatgacgccggagatggcg 1062 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcct 432 |||||||||| |||||||||||||||| | ||| |||| ||||| Sbjct: 401 cacccgctccaccgcctcaacccgcaccagtgcctccctttcct 444 Score = 44.1 bits (22), Expect = 1.2 Identities = 37/42 (88%) Strand = Plus / Plus Query: 573 tctgtagggaccccaaggacatggtcgtctccctgtggcact 614 ||||| |||| |||||||||||| |||| ||| ||||||||| Sbjct: 608 tctgtcgggaacccaaggacatgatcgtgtccatgtggcact 649
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 281 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctca 335 |||||||||||||| ||| | |||||| |||||||||||||||||||||||||| Sbjct: 7945072 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 7945126 Score = 65.9 bits (33), Expect = 3e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 986 gactgggtgaaccacatgacgccggagatggcg 1018 ||||||||||||||||||||||||||||||||| Sbjct: 7945830 gactgggtgaaccacatgacgccggagatggcg 7945862 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcct 432 |||||||||| |||||||||||||||| | ||| |||| ||||| Sbjct: 7945201 cacccgctccaccgcctcaacccgcaccagtgcctccctttcct 7945244 Score = 46.1 bits (23), Expect = 0.31 Identities = 59/71 (83%) Strand = Plus / Minus Query: 747 gggtgctcttcctcaagtacgaggacctgctgctggacacgggcaagcacgtgaggaggc 806 ||||||||||||||| ||||||||| || || |||| ||| ||||||| |||||| Sbjct: 24908910 gggtgctcttcctcaggtacgaggagatgaagcgggacccggcggggcacgtgcggaggc 24908851 Query: 807 tggcggagttc 817 ||||||||||| Sbjct: 24908850 tggcggagttc 24908840 Score = 44.1 bits (22), Expect = 1.2 Identities = 37/42 (88%) Strand = Plus / Plus Query: 573 tctgtagggaccccaaggacatggtcgtctccctgtggcact 614 ||||| |||| |||||||||||| |||| ||| ||||||||| Sbjct: 7945408 tctgtcgggaacccaaggacatgatcgtgtccatgtggcact 7945449 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 ggcgccgccgtcgccggctgc 559 ||||||||||||||||||||| Sbjct: 22579079 ggcgccgccgtcgccggctgc 22579099 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 ggcgccgccgtcgccggctgc 559 ||||||||||||||||||||| Sbjct: 22582190 ggcgccgccgtcgccggctgc 22582210 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctg 343 ||||||| |||||| |||||| ||||||||||| Sbjct: 24909373 cccaagtccggcacgacgtggatcaaggcgctg 24909341
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 281 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctca 335 |||||||||||||| ||| | |||||| |||||||||||||||||||||||||| Sbjct: 52590 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 52644 Score = 65.9 bits (33), Expect = 3e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 986 gactgggtgaaccacatgacgccggagatggcg 1018 ||||||||||||||||||||||||||||||||| Sbjct: 53348 gactgggtgaaccacatgacgccggagatggcg 53380 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcct 432 |||||||||| |||||||||||||||| | ||| |||| ||||| Sbjct: 52719 cacccgctccaccgcctcaacccgcaccagtgcctccctttcct 52762 Score = 44.1 bits (22), Expect = 1.2 Identities = 37/42 (88%) Strand = Plus / Plus Query: 573 tctgtagggaccccaaggacatggtcgtctccctgtggcact 614 ||||| |||| |||||||||||| |||| ||| ||||||||| Sbjct: 52926 tctgtcgggaacccaaggacatgatcgtgtccatgtggcact 52967
>dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054C04, full insert sequence Length = 1260 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 281 cgccccgacgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctca 335 |||||||||||||| ||| | |||||| |||||||||||||||||||||||||| Sbjct: 273 cgccccgacgacgtcatcgtggccagcctccccaagtgcggcaccacgtggctca 327 Score = 65.9 bits (33), Expect = 3e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 986 gactgggtgaaccacatgacgccggagatggcg 1018 ||||||||||||||||||||||||||||||||| Sbjct: 1031 gactgggtgaaccacatgacgccggagatggcg 1063 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgcatcccgttcct 432 |||||||||| |||||||||||||||| | ||| |||| ||||| Sbjct: 402 cacccgctccaccgcctcaacccgcaccagtgcctccctttcct 445 Score = 44.1 bits (22), Expect = 1.2 Identities = 37/42 (88%) Strand = Plus / Plus Query: 573 tctgtagggaccccaaggacatggtcgtctccctgtggcact 614 ||||| |||| |||||||||||| |||| ||| ||||||||| Sbjct: 609 tctgtcgggaacccaaggacatgatcgtgtccatgtggcact 650
>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full insert sequence Length = 1225 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgc 351 ||||||| |||| |||||||| ||||||||| |||||||||||||| |||||||| Sbjct: 256 tcctcgcgagcttccccaagtccggcaccacctggctcaaggcgctcgccttcgc 310 Score = 48.1 bits (24), Expect = 0.078 Identities = 36/40 (90%) Strand = Plus / Plus Query: 795 acgtgaggaggctggcggagttcatgggccggccgttctc 834 ||||||||| |||||| |||||||||||| | |||||||| Sbjct: 745 acgtgaggaagctggccgagttcatgggctgcccgttctc 784
>gb|AY108956.1| Zea mays PCO130274 mRNA sequence Length = 631 Score = 65.9 bits (33), Expect = 3e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgcca 353 ||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||||| Sbjct: 323 tcctcgccacctacctgaaatgcgggaccacgtggctgaaggcgctggccttcgcca 379
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 314 aagtgcggcaccacgtggctcaaggcgctggccttcgcc 352 |||||||||||||| |||||||||||||| ||||||||| Sbjct: 9822679 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 9822641 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 392 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 9822598 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 9822555 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 1822172 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 1822130 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Minus Query: 877 gctgtgcagcttcgagaagatgaagggcctggaggtgaacaaga 920 |||||||||||||||||| ||||| || |||||||||| |||| Sbjct: 9821676 gctgtgcagcttcgagaacctgaagagcttggaggtgaataaga 9821633
>dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G18, full insert sequence Length = 1207 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 314 aagtgcggcaccacgtggctcaaggcgctggccttcgcc 352 |||||||||||||| |||||||||||||| ||||||||| Sbjct: 270 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 308 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 392 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 351 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 394 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Plus Query: 877 gctgtgcagcttcgagaagatgaagggcctggaggtgaacaaga 920 |||||||||||||||||| ||||| || |||||||||| |||| Sbjct: 830 gctgtgcagcttcgagaacctgaagagcttggaggtgaataaga 873
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 61.9 bits (31), Expect = 5e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 314 aagtgcggcaccacgtggctcaaggcgctggccttcgcc 352 |||||||||||||| |||||||||||||| ||||||||| Sbjct: 109791 aagtgcggcaccacctggctcaaggcgctcgccttcgcc 109829 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 392 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 109872 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 109915 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Plus Query: 877 gctgtgcagcttcgagaagatgaagggcctggaggtgaacaaga 920 |||||||||||||||||| ||||| || |||||||||| |||| Sbjct: 110794 gctgtgcagcttcgagaacctgaagagcttggaggtgaataaga 110837
>ref|NM_001068015.1| Oryza sativa (japonica cultivar-group) Os08g0297800 (Os08g0297800) mRNA, complete cds Length = 1315 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 323 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 371 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 345 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 393 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgca 414 |||||||||| ||||||||||||||| Sbjct: 414 cacccgctccgccgcctcaacccgca 439
>ref|NM_001067865.1| Oryza sativa (japonica cultivar-group) Os08g0239900 (Os08g0239900) mRNA, complete cds Length = 1269 Score = 58.0 bits (29), Expect = 8e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||||| |||||||||||||||||||||| Sbjct: 412 cacccgctccgccgcctcaacccgcacgactgc 444
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0024C06 Length = 177529 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 323 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 371 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 111466 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 111514 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgca 414 |||||||||| ||||||||||||||| Sbjct: 111535 cacccgctccgccgcctcaacccgca 111560
>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0024C16 Length = 137779 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 323 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 371 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 57105 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 57153 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgca 414 |||||||||| ||||||||||||||| Sbjct: 57174 cacccgctccgccgcctcaacccgca 57199
>dbj|AK058698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C01, full insert sequence Length = 1315 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 323 accacgtggctcaaggcgctggccttcgccaccatgacgcgcgacgcgt 371 ||||||||||||||||| ||| | |||||||||||| |||||| ||||| Sbjct: 345 accacgtggctcaaggccctgactttcgccaccatggcgcgcggcgcgt 393 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 389 cacccgctcctccgcctcaacccgca 414 |||||||||| ||||||||||||||| Sbjct: 414 cacccgctccgccgcctcaacccgca 439
>ref|NM_001073082.1| Oryza sativa (japonica cultivar-group) Os12g0270900 (Os12g0270900) mRNA, partial cds Length = 1833 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 392 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 277 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 320 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Plus Query: 877 gctgtgcagcttcgagaagatgaagggcctggaggtgaacaaga 920 |||||||||||||||||| ||||| || |||||||||| |||| Sbjct: 756 gctgtgcagcttcgagaacctgaagagcttggaggtgaataaga 799
>dbj|AK071840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F12, full insert sequence Length = 1834 Score = 56.0 bits (28), Expect = 3e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 392 ccgctcctccgcctcaacccgcacgactgcatcccgttcctgga 435 ||||||||||| || ||||||||||||||| |||||||| |||| Sbjct: 279 ccgctcctccgtcttaacccgcacgactgcgtcccgttcatgga 322 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Plus Query: 877 gctgtgcagcttcgagaagatgaagggcctggaggtgaacaaga 920 |||||||||||||||||| ||||| || |||||||||| |||| Sbjct: 758 gctgtgcagcttcgagaacctgaagagcttggaggtgaataaga 801
>ref|NM_001049398.1| Oryza sativa (japonica cultivar-group) Os01g0311600 (Os01g0311600) mRNA, complete cds Length = 1407 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 299 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 341
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 24536 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 24494 Score = 44.1 bits (22), Expect = 1.2 Identities = 40/46 (86%) Strand = Plus / Minus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 ||||| ||| || |||||||| | ||||||| |||||||||||||| Sbjct: 26692 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 26647
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 110710 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 110668 Score = 44.1 bits (22), Expect = 1.2 Identities = 40/46 (86%) Strand = Plus / Minus Query: 297 tcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 ||||| ||| || |||||||| | ||||||| |||||||||||||| Sbjct: 112866 tcctcaccaccttccccaagtccagcaccacttggctcaaggcgct 112821
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 11687234 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 11687192 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 874 ggagctgtgcagcttcgagaagatg 898 ||||||||||| ||||||||||||| Sbjct: 33478167 ggagctgtgcaacttcgagaagatg 33478143
>emb|AJ698082.1| Oryza sativa (japonica cultivar-group) mRNA for steroid sulfotransferase (ss1 gene) Length = 1096 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 240 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 282
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 126358 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 126316
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 26402 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 26360
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 323 accacgtggctcaaggcgctggccttcgccaccatgacgcgcg 365 ||||||||||||||||| || || |||||||||||| |||||| Sbjct: 17231 accacgtggctcaaggccctcgcgttcgccaccatggcgcgcg 17189
>dbj|AK105552.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A12, full insert sequence Length = 1407 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || ||||||||| |||||||| |||||||||||||| Sbjct: 299 tcgccaccttccccaagtgtggcaccacctggctcaaggcgct 341
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 16890 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 16848
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 300 tcgccagctaccccaagtgcggcaccacgtggctcaaggcgct 342 |||||| || |||||||| ||||||||| |||||||||||||| Sbjct: 18310 tcgccaccttccccaagtccggcaccacatggctcaaggcgct 18352
>emb|CR855127.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0113I06, complete sequence Length = 87500 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Minus Query: 964 cttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggc 1017 |||||||||||| ||||| |||||||||||| |||||||| | ||||||||| Sbjct: 5433 cttcaggaaaggagtcgctggagactgggtgggtcacatgacccgggagatggc 5380 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 581 gaccccaaggacatggtcgtctccctgtggcact 614 |||||||||||| || |||||||||||||||||| Sbjct: 5828 gaccccaaggacgtgctcgtctccctgtggcact 5795 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||| || || |||||||||||||||||| Sbjct: 6020 cacccgctgctgcgtctcaacccgcacgactgc 5988
>emb|CR855088.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0104J13, complete sequence Length = 82577 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Minus Query: 964 cttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggc 1017 |||||||||||| ||||| |||||||||||| |||||||| | ||||||||| Sbjct: 78524 cttcaggaaaggagtcgctggagactgggtgggtcacatgacccgggagatggc 78471 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 581 gaccccaaggacatggtcgtctccctgtggcact 614 |||||||||||| || |||||||||||||||||| Sbjct: 78919 gaccccaaggacgtgctcgtctccctgtggcact 78886 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||| || || |||||||||||||||||| Sbjct: 79111 cacccgctgctgcgtctcaacccgcacgactgc 79079
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Minus Query: 964 cttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggc 1017 |||||||||||| ||||| |||||||||||| |||||||| | ||||||||| Sbjct: 17195731 cttcaggaaaggagtcgctggagactgggtgggtcacatgacccgggagatggc 17195678 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 581 gaccccaaggacatggtcgtctccctgtggcact 614 |||||||||||| || |||||||||||||||||| Sbjct: 17196126 gaccccaaggacgtgctcgtctccctgtggcact 17196093 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||| || || |||||||||||||||||| Sbjct: 17196318 cacccgctgctgcgtctcaacccgcacgactgc 17196286
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Minus Query: 964 cttcaggaaaggggtcgccggagactgggtgaaccacatgacgccggagatggc 1017 |||||||||||| ||||| |||||||||||| |||||||| | ||||||||| Sbjct: 140028 cttcaggaaaggagtcgctggagactgggtgggtcacatgacccgggagatggc 139975 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 581 gaccccaaggacatggtcgtctccctgtggcact 614 |||||||||||| || |||||||||||||||||| Sbjct: 140423 gaccccaaggacgtgctcgtctccctgtggcact 140390 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 |||||||| || || |||||||||||||||||| Sbjct: 140615 cacccgctgctgcgtctcaacccgcacgactgc 140583
>ref|NM_001054293.1| Oryza sativa (japonica cultivar-group) Os02g0684100 (Os02g0684100) mRNA, complete cds Length = 2433 Score = 50.1 bits (25), Expect = 0.020 Identities = 52/61 (85%) Strand = Plus / Plus Query: 289 cgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcctt 348 |||||| |||||||||| | ||||||| |||| | ||||||||||||||||| ||||| Sbjct: 1602 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 1661 Query: 349 c 349 | Sbjct: 1662 c 1662
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 50.1 bits (25), Expect = 0.020 Identities = 52/61 (85%) Strand = Plus / Minus Query: 289 cgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcctt 348 |||||| |||||||||| | ||||||| |||| | ||||||||||||||||| ||||| Sbjct: 27987092 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 27987033 Query: 349 c 349 | Sbjct: 27987032 c 27987032 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 360 cgcgcgacgcgtacccggcgccggcgcagc 389 |||||||||||| |||||||||||||||| Sbjct: 24693324 cgcgcgacgcgtggccggcgccggcgcagc 24693295
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 50.1 bits (25), Expect = 0.020 Identities = 52/61 (85%) Strand = Plus / Minus Query: 289 cgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcctt 348 |||||| |||||||||| | ||||||| |||| | ||||||||||||||||| ||||| Sbjct: 30754 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 30695 Query: 349 c 349 | Sbjct: 30694 c 30694
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 50.1 bits (25), Expect = 0.020 Identities = 52/61 (85%) Strand = Plus / Minus Query: 289 cgacgtgatcctcgccagctaccccaagtgcggcaccacgtggctcaaggcgctggcctt 348 |||||| |||||||||| | ||||||| |||| | ||||||||||||||||| ||||| Sbjct: 114544 cgacgtcatcctcgccaccatgcccaagtccggctcgacgtggctcaaggcgctcgcctt 114485 Query: 349 c 349 | Sbjct: 114484 c 114484
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Minus Query: 610 gcacttcctccggcgccggcagcc 633 |||||||||||||||||||||||| Sbjct: 11723650 gcacttcctccggcgccggcagcc 11723627
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Minus Query: 610 gcacttcctccggcgccggcagcc 633 |||||||||||||||||||||||| Sbjct: 121028 gcacttcctccggcgccggcagcc 121005
>ref|NM_132522.2| Drosophila melanogaster CG32662-RA (CG32662), mRNA Length = 4086 Score = 48.1 bits (24), Expect = 0.078 Identities = 24/24 (100%) Strand = Plus / Minus Query: 610 gcacttcctccggcgccggcagcc 633 |||||||||||||||||||||||| Sbjct: 200 gcacttcctccggcgccggcagcc 177
>emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa0054I14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148089 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Minus Query: 877 gctgtgcagcttcgagaagatgaagggcctggaggtgaacaaga 920 |||||||||||||||||| ||||| || |||||||||| |||| Sbjct: 147633 gctgtgcagcttcgagaacctgaagagcttggaggtgaataaga 147590
>ref|NM_001064653.1| Oryza sativa (japonica cultivar-group) Os06g0626600 (Os06g0626600) mRNA, complete cds Length = 1274 Score = 46.1 bits (23), Expect = 0.31 Identities = 59/71 (83%) Strand = Plus / Plus Query: 747 gggtgctcttcctcaagtacgaggacctgctgctggacacgggcaagcacgtgaggaggc 806 ||||||||||||||| ||||||||| || || |||| ||| ||||||| |||||| Sbjct: 772 gggtgctcttcctcaggtacgaggagatgaagcgggacccggcggggcacgtgcggaggc 831 Query: 807 tggcggagttc 817 ||||||||||| Sbjct: 832 tggcggagttc 842 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctg 343 ||||||| |||||| |||||| ||||||||||| Sbjct: 309 cccaagtccggcacgacgtggatcaaggcgctg 341
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 678 ccgtggccgtcggcccgatctgg 700 ||||||||||||||||||||||| Sbjct: 4066189 ccgtggccgtcggcccgatctgg 4066167
>gb|AE012016.1| Xanthomonas axonopodis pv. citri str. 306, section 394 of 469 of the complete genome Length = 10410 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 535 caccggcgccgccgtcgccggctgcaa 561 ||||||||||||||||| ||||||||| Sbjct: 7113 caccggcgccgccgtcggcggctgcaa 7139
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 46.1 bits (23), Expect = 0.31 Identities = 59/71 (83%) Strand = Plus / Minus Query: 747 gggtgctcttcctcaagtacgaggacctgctgctggacacgggcaagcacgtgaggaggc 806 ||||||||||||||| ||||||||| || || |||| ||| ||||||| |||||| Sbjct: 3465 gggtgctcttcctcaggtacgaggagatgaagcgggacccggcggggcacgtgcggaggc 3406 Query: 807 tggcggagttc 817 ||||||||||| Sbjct: 3405 tggcggagttc 3395 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctg 343 ||||||| |||||| |||||| ||||||||||| Sbjct: 3928 cccaagtccggcacgacgtggatcaaggcgctg 3896
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 46.1 bits (23), Expect = 0.31 Identities = 59/71 (83%) Strand = Plus / Minus Query: 747 gggtgctcttcctcaagtacgaggacctgctgctggacacgggcaagcacgtgaggaggc 806 ||||||||||||||| ||||||||| || || |||| ||| ||||||| |||||| Sbjct: 119993 gggtgctcttcctcaggtacgaggagatgaagcgggacccggcggggcacgtgcggaggc 119934 Query: 807 tggcggagttc 817 ||||||||||| Sbjct: 119933 tggcggagttc 119923 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctg 343 ||||||| |||||| |||||| ||||||||||| Sbjct: 120456 cccaagtccggcacgacgtggatcaaggcgctg 120424
>dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D04, full insert sequence Length = 1274 Score = 46.1 bits (23), Expect = 0.31 Identities = 59/71 (83%) Strand = Plus / Plus Query: 747 gggtgctcttcctcaagtacgaggacctgctgctggacacgggcaagcacgtgaggaggc 806 ||||||||||||||| ||||||||| || || |||| ||| ||||||| |||||| Sbjct: 772 gggtgctcttcctcaggtacgaggagatgaagcgggacccggcggggcacgtgcggaggc 831 Query: 807 tggcggagttc 817 ||||||||||| Sbjct: 832 tggcggagttc 842 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 311 cccaagtgcggcaccacgtggctcaaggcgctg 343 ||||||| |||||| |||||| ||||||||||| Sbjct: 309 cccaagtccggcacgacgtggatcaaggcgctg 341
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 715 ctactggcacgcgagcgtcgcgc 737 ||||||||||||||||||||||| Sbjct: 212257 ctactggcacgcgagcgtcgcgc 212235 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 109 cgtcgacgacggcacggtgccgaagcgcc 137 |||||||||||||||| ||||||| |||| Sbjct: 1450283 cgtcgacgacggcacgctgccgaaccgcc 1450255
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 532 ggtcaccggcgccgccgtcgcc 553 |||||||||||||||||||||| Sbjct: 784601 ggtcaccggcgccgccgtcgcc 784622
>ref|NM_114377.1| Arabidopsis thaliana sulfotransferase (AT3G45080) mRNA, complete cds Length = 990 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 317 tgcggcaccacgtggctcaaggcgct 342 ||||||||||| |||||||||||||| Sbjct: 223 tgcggcaccacttggctcaaggcgct 248
>ref|NM_114376.2| Arabidopsis thaliana sulfotransferase (AT3G45070) mRNA, complete cds Length = 1067 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 317 tgcggcaccacgtggctcaaggcgct 342 ||||||||||| |||||||||||||| Sbjct: 208 tgcggcaccacttggctcaaggcgct 233
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 716 tactggcacgcgagcgtcgcgc 737 |||||||||||||||||||||| Sbjct: 3379140 tactggcacgcgagcgtcgcgc 3379119 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 109 cgtcgacgacggcacggtgccgaagcgcc 137 |||||||||||||||| ||||||| |||| Sbjct: 2440620 cgtcgacgacggcacgctgccgaaccgcc 2440648
>gb|BT015730.1| Arabidopsis thaliana At3g45080 gene, complete cds Length = 990 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 317 tgcggcaccacgtggctcaaggcgct 342 ||||||||||| |||||||||||||| Sbjct: 223 tgcggcaccacttggctcaaggcgct 248
>gb|BT014993.1| Arabidopsis thaliana At3g45080 gene, complete cds Length = 1053 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 317 tgcggcaccacgtggctcaaggcgct 342 ||||||||||| |||||||||||||| Sbjct: 231 tgcggcaccacttggctcaaggcgct 256
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 716 tactggcacgcgagcgtcgcgc 737 |||||||||||||||||||||| Sbjct: 418188 tactggcacgcgagcgtcgcgc 418167 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 109 cgtcgacgacggcacggtgccgaagcgcc 137 |||||||||||||||| ||||||| |||| Sbjct: 3655766 cgtcgacgacggcacgctgccgaaccgcc 3655794
>gb|BT011733.1| Arabidopsis thaliana At3g45070 gene, complete cds Length = 972 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 317 tgcggcaccacgtggctcaaggcgct 342 ||||||||||| |||||||||||||| Sbjct: 208 tgcggcaccacttggctcaaggcgct 233
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 532 ggtcaccggcgccgccgtcgccggct 557 ||||||||||||||||| |||||||| Sbjct: 34085964 ggtcaccggcgccgccgccgccggct 34085939 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 caccggcgccgccgtcgccggctgc 559 ||||||||||||||||| ||||||| Sbjct: 4214621 caccggcgccgccgtcgacggctgc 4214645
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 716 tactggcacgcgagcgtcgcgc 737 |||||||||||||||||||||| Sbjct: 227920 tactggcacgcgagcgtcgcgc 227899 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 109 cgtcgacgacggcacggtgccgaagcgcc 137 |||||||||||||||| ||||||| |||| Sbjct: 3398474 cgtcgacgacggcacgctgccgaaccgcc 3398502
>emb|AL353992.1|ATF14D17 Arabidopsis thaliana DNA chromosome 3, BAC clone F14D17 Length = 89214 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 317 tgcggcaccacgtggctcaaggcgct 342 ||||||||||| |||||||||||||| Sbjct: 78857 tgcggcaccacttggctcaaggcgct 78832 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 317 tgcggcaccacgtggctcaaggcgct 342 ||||||||||| |||||||||||||| Sbjct: 81198 tgcggcaccacttggctcaaggcgct 81173
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 317 tgcggcaccacgtggctcaaggcgct 342 ||||||||||| |||||||||||||| Sbjct: 1909 tgcggcaccacttggctcaaggcgct 1884 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 317 tgcggcaccacgtggctcaaggcgct 342 ||||||||||| |||||||||||||| Sbjct: 4250 tgcggcaccacttggctcaaggcgct 4225
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 532 ggtcaccggcgccgccgtcgccggct 557 ||||||||||||||||| |||||||| Sbjct: 62199 ggtcaccggcgccgccgccgccggct 62224
>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1372_D06 Length = 129242 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 360 cgcgcgacgcgtacccggcgccggcgcagc 389 |||||||||||| |||||||||||||||| Sbjct: 74722 cgcgcgacgcgtggccggcgccggcgcagc 74693
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 ccggcgccggcgcagcacccgctcc 398 |||||||||||||||||| |||||| Sbjct: 8971329 ccggcgccggcgcagcacgcgctcc 8971353
>ref|XM_001227359.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_09433) mRNA, complete cds Length = 1248 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 386 cagcacccgctcctccgcctcaacccgca 414 |||||||||||| ||||||||||||||| Sbjct: 170 cagcacccgctcggccgcctcaacccgca 198
>ref|NM_001055701.1| Oryza sativa (japonica cultivar-group) Os03g0180800 (Os03g0180800) mRNA, complete cds Length = 1035 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 535 caccggcgccgccgtcgccggctgc 559 ||||||||||||||||| ||||||| Sbjct: 205 caccggcgccgccgtcgacggctgc 181
>ref|NM_001051020.1| Oryza sativa (japonica cultivar-group) Os01g0789000 (Os01g0789000) mRNA, complete cds Length = 1323 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 874 ggagctgtgcagcttcgagaagatg 898 ||||||||||| ||||||||||||| Sbjct: 1200 ggagctgtgcaacttcgagaagatg 1224
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 gccggcgcagcacccgctcct 399 ||||||||||||||||||||| Sbjct: 2759357 gccggcgcagcacccgctcct 2759377
>emb|X96789.2|SSSSE9I Sporosarcina sp. genes for Sse9I restriction-modification system Length = 4475 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 389 cacccgctcctccgcctcaacccgcacgactgc 421 ||||||| ||||||||||||||| | ||||||| Sbjct: 333 cacccgcacctccgcctcaaccccctcgactgc 301
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 536 accggcgccgccgtcgccggc 556 ||||||||||||||||||||| Sbjct: 740117 accggcgccgccgtcgccggc 740097 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 cggtcaccggcgccgccgtcg 551 ||||||||||||||||||||| Sbjct: 4974006 cggtcaccggcgccgccgtcg 4974026
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 agcgccgcttcgccccacgccccga 288 |||||||| |||||||||||||||| Sbjct: 623667 agcgccgcctcgccccacgccccga 623691
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 ctggacgagatcttcgccgac 451 ||||||||||||||||||||| Sbjct: 3132327 ctggacgagatcttcgccgac 3132307
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 ctcaaggcgctggccttcgcc 352 ||||||||||||||||||||| Sbjct: 1858100 ctcaaggcgctggccttcgcc 1858120
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1231 ataaataattatgattataaa 1251 ||||||||||||||||||||| Sbjct: 244615 ataaataattatgattataaa 244595
>gb|AY232326.1| Uncultured bacterium clone GN2127A01_RT dinitrogenase reductase (nifH) mRNA, partial cds Length = 327 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 646 cgccgagctgttcgagcacgt 666 ||||||||||||||||||||| Sbjct: 205 cgccgagctgttcgagcacgt 185
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 gccggcctggagctgcggctg 211 ||||||||||||||||||||| Sbjct: 1687523 gccggcctggagctgcggctg 1687543
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 874 ggagctgtgcagcttcgagaagatg 898 ||||||||||| ||||||||||||| Sbjct: 23364 ggagctgtgcaacttcgagaagatg 23340
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 102 tcacggacgtcgacgacggcacggtgccg 130 |||||| |||||||||||||||| ||||| Sbjct: 568146 tcacggtcgtcgacgacggcacgctgccg 568118
>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the 5' end of the Arf-1 gene for ADP-ribosylation factor 1, the Wnt3a gene for wingless-related MMTV integration site 3A, the Wnt9a gene for wingless-type MMTV integration site 9A, two novel genes, the 5' end of a novel gene and five CpG islands, complete sequence Length = 225396 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 869 gtggtggagctgtgcagcttc 889 ||||||||||||||||||||| Sbjct: 96917 gtggtggagctgtgcagcttc 96937
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 658 cgagcacgtctgcgacggtgccgtggccg 686 |||||||||| ||| |||||||||||||| Sbjct: 6400387 cgagcacgtcggcgccggtgccgtggccg 6400415
>dbj|AP007273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0035K09 Length = 124866 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 ggcgccgccgtcgccggctgc 559 ||||||||||||||||||||| Sbjct: 63031 ggcgccgccgtcgccggctgc 63051 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 ggcgccgccgtcgccggctgc 559 ||||||||||||||||||||| Sbjct: 66142 ggcgccgccgtcgccggctgc 66162
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415A04 Length = 160669 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 874 ggagctgtgcagcttcgagaagatg 898 ||||||||||| ||||||||||||| Sbjct: 154333 ggagctgtgcaacttcgagaagatg 154309
>dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047H05 Length = 187273 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 ggcgccgccgtcgccggctgc 559 ||||||||||||||||||||| Sbjct: 44488 ggcgccgccgtcgccggctgc 44508 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 539 ggcgccgccgtcgccggctgc 559 ||||||||||||||||||||| Sbjct: 47599 ggcgccgccgtcgccggctgc 47619
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 caccggcgccgccgtcgccggctgc 559 ||||||||||||||||| ||||||| Sbjct: 115149 caccggcgccgccgtcgacggctgc 115173
>ref|XM_955251.1| Neurospora crassa OR74A hypothetical protein (NCU07079.1) partial mRNA Length = 1860 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 acccgctcctccgcctcaacc 410 ||||||||||||||||||||| Sbjct: 1397 acccgctcctccgcctcaacc 1377
>dbj|AK070649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062P07, full insert sequence Length = 1036 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 535 caccggcgccgccgtcgccggctgc 559 ||||||||||||||||| ||||||| Sbjct: 206 caccggcgccgccgtcgacggctgc 182
>gb|AE005131.1| Halobacterium sp. NRC-1 section 162 of 170 of the complete genome Length = 11659 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 acgtcgacgacggcacggtgc 128 ||||||||||||||||||||| Sbjct: 1210 acgtcgacgacggcacggtgc 1190
>gb|AY937239.1| Chlamydomonas incerta plus agglutinin (SAG1) gene, partial cds Length = 13081 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 537 ccggcgccgccgtcgccggct 557 ||||||||||||||||||||| Sbjct: 8334 ccggcgccgccgtcgccggct 8354
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 607 gtggcacttcctccggcgccggcagcccg 635 ||||| ||||||||||| ||||||||||| Sbjct: 222625 gtggcgcttcctccggcaccggcagcccg 222597
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 535 caccggcgccgccgtcgccggctgc 559 ||||||||||||||||| ||||||| Sbjct: 43127 caccggcgccgccgtcgacggctgc 43151
>gb|AC159813.2| Mus musculus BAC clone RP23-386L9 from chromosome 12, complete sequence Length = 213561 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 753 tcttcctcaagtacgaggacc 773 ||||||||||||||||||||| Sbjct: 191683 tcttcctcaagtacgaggacc 191703
>dbj|D78144.1| Mycobacterium avium gene for MPT51, antigen 85A and MPT44, partial and complete cds Length = 1983 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 607 gtggcacttcctccggcgccggcagcccg 635 ||||| ||||||||||| ||||||||||| Sbjct: 222 gtggcgcttcctccggcaccggcagcccg 194 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 168,249,591 Number of extensions: 9128045 Number of successful extensions: 205889 Number of sequences better than 10.0: 125 Number of HSP's gapped: 205875 Number of HSP's successfully gapped: 292 Length of query: 1269 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1246 Effective length of database: 18,503,978,556 Effective search space: 23055957280776 Effective search space used: 23055957280776 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
