Clone Information

BLAST Search Result

Clone Name	FLbaf97e14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Q40073:RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase ac...	857	0.0
2	P93431:RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase act...	790	0.0
3	Q42450:RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase ac...	739	0.0
4	Q9ZT00:RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase act...	732	0.0
5	Q7X9A0:RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase ac...	683	0.0
6	P10896:RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase act...	672	0.0
7	P10871:RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase act...	650	0.0
8	Q7X999:RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase ac...	683	0.0
9	Q40281:RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase act...	677	0.0
10	Q40565:RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase ac...	665	0.0
11	Q40460:RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase ac...	664	0.0
12	O49074:RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase act...	662	0.0
13	O98997:RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase act...	654	0.0
14	O64981:RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase act...	648	0.0
15	Q01587:RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase act...	621	e-177
16	P23489:RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase act...	500	e-141
17	Q06721:RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase act...	363	e-100
18	P58555:RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase act...	358	4e-98
19	P85086:RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase act...	188	5e-47
20	P85111:RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase act...	75	8e-13
21	O28972:Y1297_ARCFU Cell division cycle protein 48 homolog AF_129...	57	2e-07
22	P62335:PRS10_SPETR 26S protease regulatory subunit S10B - Spermo...	51	1e-05
23	P62334:PRS10_MOUSE 26S protease regulatory subunit S10B - Mus mu...	51	1e-05
24	P62333:PRS10_HUMAN 26S protease regulatory subunit S10B - Homo s...	51	1e-05
25	Q2KIW6:PRS10_BOVIN 26S protease regulatory subunit S10B - Bos ta...	51	1e-05
26	O74445:PRS10_SCHPO Probable 26S protease subunit rpt4 - Schizosa...	51	2e-05
27	P84562:RCA_POPEU Ribulose bisphosphate carboxylase/oxygenase act...	47	2e-04
28	P46463:PEX1_PICPA Peroxisome biosynthesis protein PAS1 - Pichia ...	45	7e-04
29	Q9ZPR1:CD48B_ARATH Cell division control protein 48 homolog B - ...	45	7e-04
30	Q9HRW6:PSMR2_HALSA Proteasome-activating nucleotidase 2 - Haloba...	45	0.001
31	Q6LWR0:PSMR_METMP Proteasome-activating nucleotidase - Methanoco...	45	0.001
32	O78516:FTSH_GUITH Cell division protease ftsH homolog - Guillard...	44	0.002
33	Q9HPF0:CDCH_HALSA Protein cdcH - Halobacterium salinarium (Halob...	44	0.002
34	P62193:PRS4_RAT 26S protease regulatory subunit 4 - Rattus norve...	43	0.003
35	P62192:PRS4_MOUSE 26S protease regulatory subunit 4 - Mus muscul...	43	0.003
36	P62191:PRS4_HUMAN 26S protease regulatory subunit 4 - Homo sapie...	43	0.003
37	Q9UVU5:PEX6_PICAN Peroxisomal biogenesis factor 6 - Pichia angus...	43	0.003
38	P51327:FTSH_PORPU Cell division protease ftsH homolog - Porphyra...	43	0.003
39	O14126:PRS6A_SCHPO 26S protease regulatory subunit 6A - Schizosa...	43	0.005
40	O26824:PSMR_METTH Proteasome-activating nucleotidase - Methanoba...	42	0.006
41	Q90732:PRS4_CHICK 26S protease regulatory subunit 4 - Gallus gal...	42	0.006
42	Q07844:RIX7_YEAST Ribosome biogenesis ATPase RIX7 - Saccharomyce...	42	0.010
43	P49825:FTSH_ODOSI Cell division protease ftsH homolog - Odontell...	42	0.010
44	P48601:PRS4_DROME 26S protease regulatory subunit 4 - Drosophila...	41	0.013
45	Q9HNP9:PSMR1_HALSA Proteasome-activating nucleotidase 1 - Haloba...	40	0.023
46	P33297:PRS6A_YEAST 26S protease regulatory subunit 6A - Saccharo...	40	0.023
47	P46465:PRS6A_ORYSJ 26S protease regulatory subunit 6A homolog - ...	40	0.023
48	P46466:PRS4_ORYSJ 26S protease regulatory subunit 4 homolog - Or...	40	0.023
49	Q55700:FTSH1_SYNY3 Cell division protease ftsH homolog 1 - Synec...	40	0.023
50	P54776:PRS6A_SOLLC 26S protease regulatory subunit 6A homolog - ...	40	0.029
51	O23894:PRS6A_BRACM 26S protease regulatory subunit 6A homolog - ...	40	0.029
52	Q9DBY8:NVL_MOUSE Nuclear valosin-containing protein-like - Mus m...	40	0.029
53	Q96TA2:YMEL1_HUMAN ATP-dependent metalloprotease YME1L1 - Homo s...	40	0.038
54	P33289:PEX6_PICPA Peroxisomal biogenesis factor 6 - Pichia pasto...	40	0.038
55	O15381:NVL_HUMAN Nuclear valosin-containing protein-like - Homo ...	40	0.038
56	O88967:YMEL1_MOUSE ATP-dependent metalloprotease YME1L1 - Mus mu...	39	0.050
57	Q8PY58:PSMR_METMA Proteasome-activating nucleotidase - Methanosa...	39	0.066
58	Q8TI88:PSMR_METAC Proteasome-activating nucleotidase - Methanosa...	39	0.066
59	Q1XDF9:FSTH_PORYE Cell division protease ftsH homolog - Porphyra...	39	0.066
60	Q6BS73:PEX6_DEBHA Peroxisomal biogenesis factor 6 - Debaryomyces...	39	0.086
61	P72991:FTSH4_SYNY3 Cell division protease ftsH homolog 4 - Synec...	39	0.086
62	P73179:FTSH2_SYNY3 Cell division protease ftsH homolog 2 - Synec...	39	0.086
63	O28303:PSMR_ARCFU Proteasome-activating nucleotidase - Archaeogl...	38	0.11
64	P49541:YCF46_ODOSI Uncharacterized AAA domain-containing protein...	38	0.15
65	Q18787:PRS7_CAEEL Probable 26S protease regulatory subunit 7 - C...	38	0.15
66	O04019:PRS6A_ARATH 26S protease regulatory subunit 6A homolog - ...	38	0.15
67	Q6CPV1:PEX6_KLULA Peroxisomal biogenesis factor 6 - Kluyveromyce...	38	0.15
68	P24004:PEX1_YEAST Peroxisome biosynthesis protein PAS1 - Sacchar...	38	0.15
69	P33299:PRS7_YEAST 26S protease regulatory subunit 7 homolog - Sa...	37	0.19
70	P40327:PRS4_YEAST 26S protease regulatory subunit 4 homolog - Sa...	37	0.19
71	Q09803:VPS4_SCHPO Suppressor protein of bem1/bed5 double mutants...	37	0.25
72	O16368:PRS4_CAEEL Probable 26S protease regulatory subunit 4 - C...	37	0.25
73	P52917:VPS4_YEAST Vacuolar protein sorting-associated protein 4 ...	37	0.33
74	Q8TX03:PSMR_METKA Proteasome-activating nucleotidase - Methanopy...	37	0.33
75	P94304:FTSH_BACPF Cell division protease ftsH homolog - Bacillus...	37	0.33
76	Q9P3A7:CDC48_SCHPO Cell division cycle protein 48 - Schizosaccha...	37	0.33
77	P54609:CD48A_ARATH Cell division control protein 48 homolog A - ...	37	0.33
78	P0AAI4:FTSH_SHIFL Cell division protease ftsH - Shigella flexneri	36	0.42
79	P63343:FTSH_SALTY Cell division protease ftsH - Salmonella typhi...	36	0.42
80	P63344:FTSH_SALTI Cell division protease ftsH - Salmonella typhi	36	0.42
81	P0A4V8:FTSH_MYCTU Cell division protease ftsH homolog - Mycobact...	36	0.42
82	P0A4V9:FTSH_MYCBO Cell division protease ftsH homolog - Mycobact...	36	0.42
83	P0AAI3:FTSH_ECOLI Cell division protease ftsH - Escherichia coli	36	0.42
84	Q8X9L0:FTSH_ECO57 Cell division protease ftsH - Escherichia coli...	36	0.42
85	Q9UQ90:SPG7_HUMAN Paraplegin - Homo sapiens (Human)	36	0.55
86	Q5QUB8:RECA_IDILO Protein recA - Idiomarina loihiensis	36	0.55
87	O42931:PRS7_SCHPO 26S protease regulatory subunit 7 homolog - Sc...	36	0.55
88	P36612:PRS4_SCHPO 26S protease regulatory subunit 4 homolog - Sc...	36	0.55
89	Q9CD58:FTSH_MYCLE Cell division protease ftsH homolog - Mycobact...	36	0.55
90	Q9LZF6:CD48E_ARATH Cell division control protein 48 homolog E - ...	36	0.55
91	P46472:PRS7_XENLA 26S protease regulatory subunit 7 - Xenopus la...	35	0.72
92	Q5R8D7:PRS7_PONPY 26S protease regulatory subunit 7 - Pongo pygm...	35	0.72
93	P46471:PRS7_MOUSE 26S protease regulatory subunit 7 - Mus muscul...	35	0.72
94	Q4R4R0:PRS7_MACFA 26S protease regulatory subunit 7 - Macaca fas...	35	0.72
95	P35998:PRS7_HUMAN 26S protease regulatory subunit 7 - Homo sapie...	35	0.72
96	Q5E9F9:PRS7_BOVIN 26S protease regulatory subunit 7 - Bos taurus...	35	0.72
97	Q920P5:KAD5_MOUSE Adenylate kinase isoenzyme 5 - Mus musculus (M...	35	0.72
98	Q9Y6K8:KAD5_HUMAN Adenylate kinase isoenzyme 5 - Homo sapiens (H...	35	0.72
99	P73437:FTSH3_SYNY3 Cell division protease ftsH homolog 3 - Synec...	35	0.72
100	P25694:CDC48_YEAST Cell division control protein 48 - Saccharomy...	35	0.72
101	O78439:YCF46_GUITH Uncharacterized AAA domain-containing protein...	35	0.95
102	Q63347:PRS7_RAT 26S protease regulatory subunit 7 - Rattus norve...	35	0.95
103	Q63569:PRS6A_RAT 26S protease regulatory subunit 6A - Rattus nor...	35	0.95
104	O88685:PRS6A_MOUSE 26S protease regulatory subunit 6A - Mus musc...	35	0.95
105	P17980:PRS6A_HUMAN 26S protease regulatory subunit 6A - Homo sap...	35	0.95
106	P59652:FTSH_STRR6 Cell division protease ftsH homolog - Streptoc...	35	0.95
107	O69076:FTSH_STRPN Cell division protease ftsH homolog - Streptoc...	35	0.95
108	P37476:FTSH_BACSU Cell division protease ftsH homolog - Bacillus...	35	0.95
109	Q8G5R1:CLPX_BIFLO ATP-dependent Clp protease ATP-binding subunit...	35	0.95
110	Q925S8:YMEL1_RAT ATP-dependent metalloprotease YME1L1 - Rattus n...	35	1.2
111	P32795:YME1_YEAST Protein YME1 - Saccharomyces cerevisiae (Baker...	35	1.2
112	P54811:TERA1_CAEEL Transitional endoplasmic reticulum ATPase hom...	35	1.2
113	O32377:RECA_CHRVI Protein recA - Chromatium vinosum (Allochromat...	35	1.2
114	Q68XR9:FTSH_RICTY Cell division protease ftsH homolog - Ricketts...	35	1.2
115	Q9ZEA2:FTSH_RICPR Cell division protease ftsH homolog - Ricketts...	35	1.2
116	Q4UN68:FTSH_RICFE Cell division protease ftsH homolog - Ricketts...	35	1.2
117	Q92JJ9:FTSH_RICCN Cell division protease ftsH homolog - Ricketts...	35	1.2
118	Q5Z974:FTSH_ORYSJ Cell division protease ftsH homolog, chloropla...	35	1.2
119	P46462:TERA_RAT Transitional endoplasmic reticulum ATPase - Ratt...	34	1.6
120	P03974:TERA_PIG Transitional endoplasmic reticulum ATPase - Sus ...	34	1.6
121	Q01853:TERA_MOUSE Transitional endoplasmic reticulum ATPase - Mu...	34	1.6
122	P55072:TERA_HUMAN Transitional endoplasmic reticulum ATPase - Ho...	34	1.6
123	Q3ZBT1:TERA_BOVIN Transitional endoplasmic reticulum ATPase - Bo...	34	1.6
124	O52394:RECA_CHLAU Protein recA - Chloroflexus aurantiacus	34	1.6
125	O82150:FTSH_TOBAC Cell division protease ftsH homolog, chloropla...	34	1.6
126	Q1RGP0:FTSH_RICBR Cell division protease ftsH homolog - Ricketts...	34	1.6
127	Q9FH02:FTSH2_ARATH Cell division protease ftsH homolog 2, chloro...	34	1.6
128	Q39102:FTSH1_ARATH Cell division protease ftsH homolog 1, chloro...	34	1.6
129	Q9L723:RECA_LISMO Protein recA - Listeria monocytogenes	34	2.1
130	Q71ZS2:RECA_LISMF Protein recA - Listeria monocytogenes serotype...	34	2.1
131	Q92BV7:RECA_LISIN Protein recA - Listeria innocua	34	2.1
132	P62215:RECA_GEOSL Protein recA - Geobacter sulfurreducens	34	2.1
133	O52393:RECA_CHLTE Protein recA - Chlorobium tepidum	34	2.1
134	O42586:PR6AB_XENLA 26S protease regulatory subunit 6A-B - Xenopu...	34	2.1
135	O42587:PR6AA_XENLA 26S protease regulatory subunit 6A-A - Xenopu...	34	2.1
136	Q74Z13:PEX6_ASHGO Peroxisomal biogenesis factor 6 - Ashbya gossy...	34	2.1
137	O61577:KTNA1_STRPU Katanin p60 ATPase-containing subunit - Stron...	34	2.1
138	P46469:FTSH_LACLA Cell division protease ftsH homolog - Lactococ...	34	2.1
139	Q7MHR4:RECA_VIBVY Protein recA - Vibrio vulnificus (strain YJ016)	33	2.8
140	Q8DC51:RECA_VIBVU Protein recA - Vibrio vulnificus	33	2.8
141	P45383:RECA_VIBCH Protein recA - Vibrio cholerae	33	2.8
142	P48296:RECA_THEAQ Protein recA - Thermus aquaticus	33	2.8
143	P94190:RECA_AERS4 Protein recA - Aeromonas salmonicida (strain A...	33	2.8
144	P48292:RECA2_MYXXA Protein recA 2 - Myxococcus xanthus	33	2.8
145	Q9YAC7:PSMR_AERPE Proteasome-activating nucleotidase - Aeropyrum...	33	2.8
146	Q9PUL2:KTNA1_XENLA Katanin p60 ATPase-containing subunit - Xenop...	33	2.8
147	Q8K9G8:FTSH_BUCAP Cell division protease ftsH - Buchnera aphidic...	33	2.8
148	P71377:FTSH1_HAEIN Cell division protease ftsH homolog 1 - Haemo...	33	2.8
149	P20930:FILA_HUMAN Filaggrin - Homo sapiens (Human)	33	2.8
150	Q920A7:AFG31_MOUSE AFG3-like protein 1 - Mus musculus (Mouse)	33	2.8
151	P26348:RECA_VIBAN Protein recA - Vibrio anguillarum (Listonella ...	33	3.6
152	Q83TH3:RECA_LISWE Protein recA - Listeria welshimeri	33	3.6
153	Q83TH4:RECA_LISSE Protein recA - Listeria seeligeri	33	3.6
154	Q83TH2:RECA_LISIV Protein recA - Listeria ivanovii	33	3.6
155	A2RI85:RECA_LACLM Protein recA - Lactococcus lactis subsp. cremo...	33	3.6
156	P0C2U5:RECA_LACLC Protein recA - Lactococcus lactis subsp. cremo...	33	3.6
157	Q895I5:RECA_CLOTE Protein recA - Clostridium tetani	33	3.6
158	P58254:RECA_CLOAB Protein recA - Clostridium acetobutylicum	33	3.6
159	P29225:RECA_ACHLA Protein recA - Acholeplasma laidlawii	33	3.6
160	P0C2U4:RECA1_LACLA Protein recA, chromosomal - Lactococcus lacti...	33	3.6
161	Q96372:CDC48_CAPAN Cell division cycle protein 48 homolog - Caps...	33	3.6
162	Q9SCN8:CD48D_ARATH Cell division control protein 48 homolog D - ...	33	3.6
163	P23787:TERA_XENLA Transitional endoplasmic reticulum ATPase - Xe...	33	4.7
164	Q87LR1:RECA_VIBPA Protein recA - Vibrio parahaemolyticus	33	4.7
165	Q8RA55:RECA_THETN Protein recA - Thermoanaerobacter tengcongensis	33	4.7
166	Q8CXG7:RECA_OCEIH Protein recA - Oceanobacillus iheyensis	33	4.7
167	Q5WFX1:RECA_BACSK Protein recA - Bacillus clausii (strain KSM-K16)	33	4.7
168	Q9KAA7:RECA_BACHD Protein recA - Bacillus halodurans	33	4.7
169	P34123:PRS6B_DICDI 26S protease regulatory subunit 6B homolog - ...	33	4.7
170	O67077:FTSH_AQUAE Cell division protease ftsH homolog - Aquifex ...	33	4.7
171	P54774:CDC48_SOYBN Cell division cycle protein 48 homolog - Glyc...	33	4.7
172	Q8JZQ2:AFG32_MOUSE AFG3-like protein 2 - Mus musculus (Mouse)	33	4.7
173	Q9Y4W6:AFG32_HUMAN AFG3-like protein 2 - Homo sapiens (Human)	33	4.7
174	Q7UJJ0:RECA_RHOBA Protein recA - Rhodopirellula baltica	32	6.1
175	P77925:RECA_PORGI Protein recA - Porphyromonas gingivalis (Bacte...	32	6.1
176	Q6KCJ3:RECA_ENTMU Protein recA - Enterococcus mundtii	32	6.1
177	Q6KCJ5:RECA_ENTHR Protein recA - Enterococcus hirae	32	6.1
178	Q6KCJ6:RECA_ENTFC Protein recA - Enterococcus faecium (Streptoco...	32	6.1
179	P42444:RECA_ENTFA Protein recA - Enterococcus faecalis (Streptoc...	32	6.1
180	Q7ZX23:KCY_XENLA UMP-CMP kinase - Xenopus laevis (African clawed...	32	6.1
181	Q0SGR9:GLGB_RHOSR 1,4-alpha-glucan-branching enzyme - Rhodococcu...	32	6.1
182	Q39444:FTSH_CAPAN Cell division protease ftsH homolog, chloropla...	32	6.1
183	Q2KJI7:AFG32_BOVIN AFG3-like protein 2 - Bos taurus (Bovine)	32	6.1
184	P54812:TERA2_CAEEL Transitional endoplasmic reticulum ATPase hom...	32	8.0
185	Q88UZ4:RECA_LACPL Protein recA - Lactobacillus plantarum	32	8.0
186	Q6KCK3:RECA_LACPE Protein recA - Lactobacillus pentosus	32	8.0
187	Q5FL82:RECA_LACAC Protein recA - Lactobacillus acidophilus	32	8.0
188	Q8VS69:RECA_BORHE Protein recA - Borrelia hermsii	32	8.0
189	Q662N0:RECA_BORGA Protein recA - Borrelia garinii	32	8.0
190	Q59180:RECA_BORBU Protein recA - Borrelia burgdorferi (Lyme dise...	32	8.0
191	Q4KM73:KCY_RAT UMP-CMP kinase - Rattus norvegicus (Rat)	32	8.0
192	Q9DBP5:KCY_MOUSE UMP-CMP kinase - Mus musculus (Mouse)	32	8.0
193	P30085:KCY_HUMAN UMP-CMP kinase - Homo sapiens (Human)	32	8.0
194	Q3IKH4:G6PI_PSEHT Glucose-6-phosphate isomerase - Pseudoalteromo...	32	8.0
195	P57462:FTSH_BUCAI Cell division protease ftsH - Buchnera aphidic...	32	8.0
196	Q9QYP2:CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 -...	32	8.0
197	Q9R0M0:CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2...	32	8.0
198	Q9HCU4:CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2...	32	8.0

>Q40073:RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast|
            precursor - Hordeum vulgare (Barley)
          Length = 464
 Score =  857 bits (2215), Expect(2) = 0.0
 Identities = 425/427 (99%), Positives = 425/427 (99%)
 Frame = +2

Query: 92   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 271
            MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK
Sbjct: 1    MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 60

Query: 272  WKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 451
            WKGLAYDISDDQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGG
Sbjct: 61   WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGG 120

Query: 452  FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 631
            FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS
Sbjct: 121  FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 180

Query: 632  AGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 811
            AGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV
Sbjct: 181  AGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 240

Query: 812  NATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 991
            NATLMNIADAPTNVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD
Sbjct: 241  NATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 300

Query: 992  DRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIG 1171
            DRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIG
Sbjct: 301  DRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIG 360

Query: 1172 KRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAM 1351
            KRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAM
Sbjct: 361  KRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAM 420

Query: 1352 KTGSFYG 1372
            KTGSFYG
Sbjct: 421  KTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 0.0
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +1

Query: 1420 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 1533
            GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427  GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

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>P93431:RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Oryza sativa subsp. japonica (Rice)
          Length = 466

 Score =  790 bits (2040), Expect(2) = 0.0
 Identities = 386/429 (89%), Positives = 409/429 (95%), Gaps = 2/429 (0%)
 Frame = +2

Query: 92   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD- 268
            MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS  NRF VMA E +DE + TD 
Sbjct: 1    MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQ 59

Query: 269  -KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTM 445
             +WKGLAYDISDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTM
Sbjct: 60   DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTM 119

Query: 446  GGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM 625
            GGFYIAPAFMDKLVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIM
Sbjct: 120  GGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 179

Query: 626  MSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 805
            MSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ
Sbjct: 180  MSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 239

Query: 806  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 985
            MVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 240  MVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 299

Query: 986  RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 1165
            RDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG+EN
Sbjct: 300  RDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVEN 359

Query: 1166 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 1345
            IGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN D
Sbjct: 360  IGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSD 419

Query: 1346 AMKTGSFYG 1372
            AMKTGSFYG
Sbjct: 420  AMKTGSFYG 428



 Score = 70.9 bits (172), Expect(2) = 0.0
 Identities = 33/39 (84%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = +1

Query: 1420 GKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 1533
            G+GAQQ G LPVPEGCTD  AKN+DPTARSDDGSCLYTF
Sbjct: 428  GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYTF 466

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>Q42450:RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplast|
            precursor - Hordeum vulgare (Barley)
          Length = 425

 Score =  739 bits (1908), Expect = 0.0
 Identities = 366/431 (84%), Positives = 396/431 (91%), Gaps = 4/431 (0%)
 Frame = +2

Query: 92   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 265
            MA+AFSSTVGAPASTPT FLGKK+K        YHG +   +R   VMAA+  +D+ + T
Sbjct: 1    MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 54

Query: 266  D--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDN 439
            D  +WKGLAYDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDN
Sbjct: 55   DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 114

Query: 440  TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 619
            TM G YIAPAFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINP
Sbjct: 115  TMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 174

Query: 620  IMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVN 799
            IMMSAGELESGN GEPAKLIRQRYREAAD+I KGKMCCLFINDLDAGAGRMGGTTQYTVN
Sbjct: 175  IMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVN 233

Query: 800  NQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWA 979
            NQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWA
Sbjct: 234  NQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWA 293

Query: 980  PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 1159
            PTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G+
Sbjct: 294  PTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGV 353

Query: 1160 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 1339
            ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN
Sbjct: 354  ENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQAN 413

Query: 1340 QDAMKTGSFYG 1372
             DAMKTG+FYG
Sbjct: 414  DDAMKTGAFYG 424

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>Q9ZT00:RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Zea mays (Maize)
          Length = 433

 Score =  732 bits (1889), Expect = 0.0
 Identities = 359/432 (83%), Positives = 398/432 (92%), Gaps = 6/432 (1%)
 Frame = +2

Query: 92   MAAAFSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKR 259
            MAAAFSSTVGAPASTPT  +FLGKKL K QV++AV YHGKSS +N RF  MAA+ +DE +
Sbjct: 1    MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETK 60

Query: 260  NTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDF 433
             TD  +WKGLAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+F
Sbjct: 61   QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNF 120

Query: 434  DNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 613
            DN M GFYIA  FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI
Sbjct: 121  DNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 180

Query: 614  NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
             PIMMSAGELESGNAGEPAKLIRQRYREA+D+IKKGKM CLFINDLDAGAGRMGGTTQYT
Sbjct: 181  TPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYT 240

Query: 794  VNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFY 973
            VNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFY
Sbjct: 241  VNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFY 300

Query: 974  WAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 1153
            WAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  T
Sbjct: 301  WAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSET 360

Query: 1154 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 1333
            G+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+
Sbjct: 361  GVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGE 420

Query: 1334 ANQDAMKTGSFY 1369
            AN+DAMKTGSF+
Sbjct: 421  ANEDAMKTGSFF 432

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>Q7X9A0:RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast|
            precursor - Larrea tridentata (Creosote bush)
          Length = 476

 Score =  683 bits (1763), Expect(2) = 0.0
 Identities = 336/438 (76%), Positives = 380/438 (86%), Gaps = 11/438 (2%)
 Frame = +2

Query: 92   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 241
            MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1    MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 242  -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 418
             + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60   ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 419  RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVF 598
            R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF
Sbjct: 120  RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVF 179

Query: 599  AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 778
            AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGG
Sbjct: 180  AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGG 239

Query: 779  TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 958
            TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 240  TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 299

Query: 959  MEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRK 1138
            MEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRK
Sbjct: 300  MEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRK 359

Query: 1139 WVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQ 1318
            WV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+
Sbjct: 360  WVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSE 419

Query: 1319 AALGDANQDAMKTGSFYG 1372
            AALGDAN DA+K G+FYG
Sbjct: 420  AALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 0.0
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = +1

Query: 1417 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 1533
            GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437  GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

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>P10896:RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Arabidopsis thaliana (Mouse-ear cress)
          Length = 474

 Score =  672 bits (1734), Expect(2) = 0.0
 Identities = 332/422 (78%), Positives = 368/422 (87%)
 Frame = +2

Query: 107  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLA 286
            S  V APAST   FLGKK    V +   +   + K+N    + A   D++ + D+W+GLA
Sbjct: 23   SGAVSAPAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLA 75

Query: 287  YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAP 466
            YD SDDQQDITRGKG+VDS+FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAP
Sbjct: 76   YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAP 135

Query: 467  AFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE 646
            AFMDKLVVH++KNF+TLPNIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELE
Sbjct: 136  AFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELE 195

Query: 647  SGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLM 826
            SGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLM
Sbjct: 196  SGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLM 255

Query: 827  NIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGV 1006
            NIAD PTNVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGV
Sbjct: 256  NIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGV 315

Query: 1007 CKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVN 1186
            CKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLVN
Sbjct: 316  CKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVN 375

Query: 1187 SRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 1366
            SR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+F
Sbjct: 376  SREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTF 435

Query: 1367 YG 1372
            YG
Sbjct: 436  YG 437



 Score = 67.8 bits (164), Expect(2) = 0.0
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +1

Query: 1420 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 1533
            GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437  GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

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>P10871:RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Spinacia oleracea (Spinach)
          Length = 472

 Score =  650 bits (1676), Expect(2) = 0.0
 Identities = 322/418 (77%), Positives = 358/418 (85%), Gaps = 1/418 (0%)
 Frame = +2

Query: 122  APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 298
            A AS PT+ FLG  LKK           SS+    TV AAEN  E++NTDKW  LA D S
Sbjct: 23   AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77

Query: 299  DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 478
            DDQ DI RGKG+VDSLFQAP   GTH  + SS+EY SQGLRKYD DN +G FYIAPAFMD
Sbjct: 78   DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMD 137

Query: 479  KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 658
            KLVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNA
Sbjct: 138  KLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNA 197

Query: 659  GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD 838
            GEPAKLIRQRYREAAD+I KGKMC LFINDL+ GAGRMGGTTQYTVNNQMVNATLMNIAD
Sbjct: 198  GEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIAD 257

Query: 839  APTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGI 1018
             PTNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GI
Sbjct: 258  NPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGI 317

Query: 1019 FQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDG 1198
            F+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DG
Sbjct: 318  FKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDG 377

Query: 1199 PVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 1372
            P  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 378  PPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 0.0
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = +1

Query: 1420 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 1527
            GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435  GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

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>Q7X999:RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplast|
            precursor - Larrea tridentata (Creosote bush)
          Length = 435

 Score =  683 bits (1762), Expect = 0.0
 Identities = 335/436 (76%), Positives = 380/436 (87%), Gaps = 11/436 (2%)
 Frame = +2

Query: 92   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 241
            MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1    MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 242  -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 418
             + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60   ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 419  RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVF 598
            R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF
Sbjct: 120  RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVF 179

Query: 599  AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 778
            AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGG
Sbjct: 180  AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGG 239

Query: 779  TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 958
            TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 240  TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 299

Query: 959  MEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRK 1138
            MEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRK
Sbjct: 300  MEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRK 359

Query: 1139 WVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQ 1318
            WV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+
Sbjct: 360  WVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSE 419

Query: 1319 AALGDANQDAMKTGSF 1366
            AALGDANQDA+K G+F
Sbjct: 420  AALGDANQDAIKRGTF 435

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>Q40281:RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Malus domestica (Apple) (Malus sylvestris)
          Length = 437

 Score =  677 bits (1747), Expect = 0.0
 Identities = 331/424 (78%), Positives = 375/424 (88%), Gaps = 2/424 (0%)
 Frame = +2

Query: 107  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 280
            SS+   P+ST   FLG  LKK     VN    +SK +  ++    ++DE + TDK  WKG
Sbjct: 22   SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73

Query: 281  LAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 460
            LA+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G+YI
Sbjct: 74   LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYI 133

Query: 461  APAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 640
            APAFMDKLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGE
Sbjct: 134  APAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGE 193

Query: 641  LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 820
            LESGNAGEPAKLIRQRYREAAD+I+KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNAT
Sbjct: 194  LESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNAT 253

Query: 821  LMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 1000
            LMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 254  LMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 313

Query: 1001 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 1180
            GVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G+++IGK+L
Sbjct: 314  GVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKL 373

Query: 1181 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 1360
            VNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG
Sbjct: 374  VNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTG 433

Query: 1361 SFYG 1372
            +FYG
Sbjct: 434  TFYG 437

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>Q40565:RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplast|
            precursor - Nicotiana tabacum (Common tobacco)
          Length = 439

 Score =  665 bits (1717), Expect = 0.0
 Identities = 329/426 (77%), Positives = 369/426 (86%), Gaps = 4/426 (0%)
 Frame = +2

Query: 101  AFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--D 268
            + +++V   +   T F GK LKK     V+        NR   +AAE  + D K+ T  D
Sbjct: 17   SLNNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSD 73

Query: 269  KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMG 448
            +WKGL  D SDDQQDI RGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ 
Sbjct: 74   RWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLD 133

Query: 449  GFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 628
            GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMM
Sbjct: 134  GFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMM 193

Query: 629  SAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 808
            SAGELESGNAGEPAKLIRQRYREAA++I+KG +CCLFINDLDAGAGRMGGTTQYTVNNQM
Sbjct: 194  SAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTVNNQM 253

Query: 809  VNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 988
            VNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR
Sbjct: 254  VNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR 313

Query: 989  DDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENI 1168
            +DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TGIE I
Sbjct: 314  EDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAI 373

Query: 1169 GKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDA 1348
            G +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA
Sbjct: 374  GDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADA 433

Query: 1349 MKTGSF 1366
            + TG+F
Sbjct: 434  INTGNF 439

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>Q40460:RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast|
            precursor - Nicotiana tabacum (Common tobacco)
          Length = 442

 Score =  664 bits (1713), Expect = 0.0
 Identities = 333/436 (76%), Positives = 366/436 (83%), Gaps = 16/436 (3%)
 Frame = +2

Query: 110  STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 247
            ST+GA   TP              T F GK LKK     V+    ++K+ R  V    ++
Sbjct: 6    STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64

Query: 248  DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLR 421
            D K+ TD  +WKGL  D SDDQQDITRGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR
Sbjct: 65   DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124

Query: 422  KYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFA 601
            +Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF 
Sbjct: 125  QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFR 184

Query: 602  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 781
            KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG MCCLFINDLDAGAGRMGGT
Sbjct: 185  KMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGT 244

Query: 782  TQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 961
            TQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRM
Sbjct: 245  TQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRM 304

Query: 962  EKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKW 1141
            EKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKW
Sbjct: 305  EKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKW 364

Query: 1142 VGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQA 1321
            V  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +A
Sbjct: 365  VSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEA 424

Query: 1322 ALGDANQDAMKTGSFY 1369
            ALGDAN DA+  GSF+
Sbjct: 425  ALGDANADAINNGSFF 440

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>O49074:RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Solanum pennellii (Tomato) (Lycopersicon
            pennellii)
          Length = 459

 Score =  662 bits (1709), Expect = 0.0
 Identities = 328/435 (75%), Positives = 369/435 (84%), Gaps = 14/435 (3%)
 Frame = +2

Query: 98   AAFSSTVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMA 235
            AA  ST+GA +  P              T F GK LKK     V+       +NR   + 
Sbjct: 2    AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVV 58

Query: 236  AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 415
            A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSLFQAPTG GTH A+++SYEYVSQ 
Sbjct: 59   AQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQA 117

Query: 416  LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 595
            L+ Y  DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 118  LKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELV 177

Query: 596  FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMG 775
            F KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG MCCLFINDLDAGAGRMG
Sbjct: 178  FRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMG 237

Query: 776  GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDG 955
            GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDG
Sbjct: 238  GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDG 297

Query: 956  RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 1135
            RMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVR
Sbjct: 298  RMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVR 357

Query: 1136 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMS 1315
            KWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ 
Sbjct: 358  KWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLK 417

Query: 1316 QAALGDANQDAMKTG 1360
            +AALGDAN DA+ TG
Sbjct: 418  EAALGDANADAINTG 432

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>O98997:RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Phaseolus aureus (Mung bean) (Vigna radiata)
          Length = 439

 Score =  654 bits (1688), Expect = 0.0
 Identities = 323/420 (76%), Positives = 368/420 (87%), Gaps = 3/420 (0%)
 Frame = +2

Query: 119  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 289
            GA AS PT+ F G  LKK V S V  + K +  +   V A + I+E + T  D+WKGLAY
Sbjct: 22   GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80

Query: 290  DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 469
            DISDDQQDITRGKG+VD LFQAP   GTH AV+SSYEY+S GLR+   DN   GFYIAPA
Sbjct: 81   DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPA 138

Query: 470  FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 649
            F+DKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES
Sbjct: 139  FLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 198

Query: 650  GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMN 829
            GNAGEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMN
Sbjct: 199  GNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMN 258

Query: 830  IADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVC 1009
            IAD PTNVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVC
Sbjct: 259  IADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVC 318

Query: 1010 KGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNS 1189
            KGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G++  GK+LVNS
Sbjct: 319  KGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNS 378

Query: 1190 RDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 1369
            ++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 379  KEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

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>O64981:RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Phaseolus vulgaris (Kidney bean) (French
            bean)
          Length = 441

 Score =  648 bits (1671), Expect = 0.0
 Identities = 314/420 (74%), Positives = 371/420 (88%), Gaps = 3/420 (0%)
 Frame = +2

Query: 119  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 289
            G  AS P++ F G  LKK ++S V  + K +  +   V A + I+E + T  D+W+GLAY
Sbjct: 22   GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80

Query: 290  DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 469
            D+SDDQQDITRGKG+VDSLFQAP   GTH AV+SS++Y+S GLR+Y+FDN   GFYIAPA
Sbjct: 81   DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPA 140

Query: 470  FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 649
            F+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELES
Sbjct: 141  FLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 200

Query: 650  GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMN 829
            GNAGEPAKLIRQRYREA+D+IKKGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMN
Sbjct: 201  GNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMN 260

Query: 830  IADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVC 1009
            IAD PTNVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC
Sbjct: 261  IADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC 320

Query: 1010 KGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNS 1189
            KGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G++++GK+LVNS
Sbjct: 321  KGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNS 380

Query: 1190 RDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 1369
            ++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 381  KEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

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>Q01587:RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Cucumis sativus (Cucumber)
          Length = 413

 Score =  621 bits (1601), Expect = e-177
 Identities = 306/414 (73%), Positives = 345/414 (83%), Gaps = 14/414 (3%)
 Frame = +2

Query: 98   AAFSSTVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMA 235
            AA  ST+GA   T  N            FLG +LK      V+    +SK     F ++A
Sbjct: 2    AATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVA 55

Query: 236  AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 415
             ++ +++   DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYEY+S G
Sbjct: 56   EQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAG 115

Query: 416  LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 595
            LR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 116  LRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELV 175

Query: 596  FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMG 775
            FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGR+G
Sbjct: 176  FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLG 235

Query: 776  GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDG 955
            GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDG
Sbjct: 236  GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDG 295

Query: 956  RMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVR 1135
            RM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVR
Sbjct: 296  RMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVR 355

Query: 1136 KWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 1297
            KW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 356  KWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

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>P23489:RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast|
            precursor - Chlamydomonas reinhardtii
          Length = 408

 Score =  500 bits (1288), Expect = e-141
 Identities = 249/361 (68%), Positives = 290/361 (80%), Gaps = 3/361 (0%)
 Frame = +2

Query: 254  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 424
            ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 37   RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94

Query: 425  YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 604
              F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K
Sbjct: 95   ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154

Query: 605  MGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTT 784
            +GI PI+MSAGELESGNAGEPAKLIR RYREA+D+IKKG+MC LFINDLDAGAGRMG TT
Sbjct: 155  LGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTT 214

Query: 785  QYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRME 964
            QYTVNNQMVNATLMNIAD PTNVQLPG+Y  EE PRVPIV TGNDFSTLYAPLIRDGRME
Sbjct: 215  QYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRME 274

Query: 965  KFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWV 1144
            K+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+
Sbjct: 275  KYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWI 334

Query: 1145 GSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAA 1324
              TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A 
Sbjct: 335  TDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAE 393

Query: 1325 L 1327
            L
Sbjct: 394  L 394

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>Q06721:RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase activase - Anabaena sp.|
            (strain CA / ATCC 33047)
          Length = 415

 Score =  363 bits (933), Expect = e-100
 Identities = 172/287 (59%), Positives = 220/287 (76%), Gaps = 1/287 (0%)
 Frame = +2

Query: 452  FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 631
            +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+   ++S
Sbjct: 3    YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62

Query: 632  AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 808
             GELES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR    TQYTVN Q+
Sbjct: 63   GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQL 122

Query: 809  VNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 988
            VNATLMNIAD PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P R
Sbjct: 123  VNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHR 182

Query: 989  DDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENI 1168
            D+++G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G EN+
Sbjct: 183  DEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENV 242

Query: 1169 GKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 1309
              R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 243  SLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

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>P58555:RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase activase - Anabaena sp.|
            (strain PCC 7120)
          Length = 414

 Score =  358 bits (919), Expect = 4e-98
 Identities = 171/287 (59%), Positives = 218/287 (75%), Gaps = 1/287 (0%)
 Frame = +2

Query: 452  FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 631
            +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI   ++S
Sbjct: 3    YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62

Query: 632  AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 808
             GELES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR    TQYTVN Q+
Sbjct: 63   GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQL 122

Query: 809  VNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 988
            VNATLMNIAD PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P R
Sbjct: 123  VNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNR 182

Query: 989  DDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENI 1168
            DD++G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G E I
Sbjct: 183  DDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERI 242

Query: 1169 GKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 1309
              R+VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 243  SLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

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>P85086:RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast -|
            Arachis hypogaea (Peanut)
          Length = 140

 Score =  188 bits (478), Expect = 5e-47
 Identities = 129/277 (46%), Positives = 136/277 (49%)
 Frame = +2

Query: 278  GLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFY 457
            GLAYDISDDQQDITRG  +VDSLFQAP  DGTH AV+SSYEY+SQGLR            
Sbjct: 1    GLAYDISDDQQDITRG--MVDSLFQAPMNDGTHYAVMSSYEYISQGLR------------ 46

Query: 458  IAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAG 637
                                    +PLILGIWGGK              MGINPIMMSAG
Sbjct: 47   ------------------------VPLILGIWGGK--------------MGINPIMMSAG 68

Query: 638  ELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA 817
            ELESGNAGEPA                 KMCCLFINDLDAGAG                 
Sbjct: 69   ELESGNAGEPA-----------------KMCCLFINDLDAGAG----------------- 94

Query: 818  TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 997
                                    RVPI+VTGNDFSTLYAPLI                R
Sbjct: 95   ------------------------RVPIIVTGNDFSTLYAPLI----------------R 114

Query: 998  IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALR 1108
            IGVC GIF           ++VDTFPGQSIDFFGALR
Sbjct: 115  IGVCTGIF-----------RLVDTFPGQSIDFFGALR 140

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>P85111:RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast -|
           Vitis sp. (Grape)
          Length = 62

 Score = 75.1 bits (183), Expect = 8e-13
 Identities = 40/61 (65%), Positives = 42/61 (68%)
 Frame = +2

Query: 602 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 781
           +MGINPIMMSAGELESGNAGEPA                 KMCCLFINDLDAGAGR+G  
Sbjct: 15  RMGINPIMMSAGELESGNAGEPA-----------------KMCCLFINDLDAGAGRIGVC 57

Query: 782 T 784
           T
Sbjct: 58  T 58



 Score = 34.3 bits (77), Expect = 1.6
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2

Query: 278 GLAYDISDDQQDITR 322
           GLAYDISDDQQDITR
Sbjct: 1   GLAYDISDDQQDITR 15

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>O28972:Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 - Archaeoglobus|
            fulgidus
          Length = 733

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
 Frame = +2

Query: 521  NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 700
            NIK P  + ++G  G GK+   + V  +   N I +   EL S   GE  K +R+ +R+A
Sbjct: 485  NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544

Query: 701  ADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 880
              +      C +F +++D+ A R GG     V  ++V+  L          +L G+   E
Sbjct: 545  RQVAP----CVIFFDEIDSLAPRRGGIGDSHVTERVVSQLL---------TELDGL---E 588

Query: 881  ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGV------CKGIFQTDNVSD 1042
            E   V ++   N    +   L+R GR+E+  + P  D +  V       +G    D+V+ 
Sbjct: 589  ELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNI 648

Query: 1043 ESVVKIVDTFPGQSID 1090
            E + +  + + G  I+
Sbjct: 649  EELAEKTEGYSGADIE 664

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>P62335:PRS10_SPETR 26S protease regulatory subunit S10B - Spermophilus tridecemlineatus|
            (Thirteen-lined ground squirrel)
          Length = 389

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172  LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
            C +F++++DA  GR    ++ T  ++ +  TLM + +     Q+ G    +   RV +++
Sbjct: 228  CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMELLN-----QMDGF---DTLHRVKMIM 277

Query: 908  TGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCK----GIFQTDNVSDESVVKIVDT 1069
              N   TL   L+R GR+++      P    R+ + K     I +   +  E++VK+ D 
Sbjct: 278  ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDG 337

Query: 1070 FPGQSI 1087
            F G  +
Sbjct: 338  FNGADL 343

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>P62334:PRS10_MOUSE 26S protease regulatory subunit S10B - Mus musculus (Mouse)|
          Length = 389

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172  LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
            C +F++++DA  GR    ++ T  ++ +  TLM + +     Q+ G    +   RV +++
Sbjct: 228  CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMELLN-----QMDGF---DTLHRVKMIM 277

Query: 908  TGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCK----GIFQTDNVSDESVVKIVDT 1069
              N   TL   L+R GR+++      P    R+ + K     I +   +  E++VK+ D 
Sbjct: 278  ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDG 337

Query: 1070 FPGQSI 1087
            F G  +
Sbjct: 338  FNGADL 343

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>P62333:PRS10_HUMAN 26S protease regulatory subunit S10B - Homo sapiens (Human)|
          Length = 389

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172  LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
            C +F++++DA  GR    ++ T  ++ +  TLM + +     Q+ G    +   RV +++
Sbjct: 228  CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMELLN-----QMDGF---DTLHRVKMIM 277

Query: 908  TGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCK----GIFQTDNVSDESVVKIVDT 1069
              N   TL   L+R GR+++      P    R+ + K     I +   +  E++VK+ D 
Sbjct: 278  ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDG 337

Query: 1070 FPGQSI 1087
            F G  +
Sbjct: 338  FNGADL 343

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>Q2KIW6:PRS10_BOVIN 26S protease regulatory subunit S10B - Bos taurus (Bovine)|
          Length = 389

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172  LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
            C +F++++DA  GR    ++ T  ++ +  TLM + +     Q+ G    +   RV +++
Sbjct: 228  CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMELLN-----QMDGF---DTLHRVKMIM 277

Query: 908  TGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCK----GIFQTDNVSDESVVKIVDT 1069
              N   TL   L+R GR+++      P    R+ + K     I +   +  E++VK+ D 
Sbjct: 278  ATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDG 337

Query: 1070 FPGQSI 1087
            F G  +
Sbjct: 338  FNGADL 343

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>O74445:PRS10_SCHPO Probable 26S protease subunit rpt4 - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 388

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
 Frame = +2

Query: 524  IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
            IK P  + ++G  G GK+     V A +G+N + + +  +     GE A++IR+ +  A 
Sbjct: 163  IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYA- 221

Query: 704  DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEE 883
               K+ + C +F++++DA  GR    ++ T  ++ +  TLM + +        G      
Sbjct: 222  ---KEHEPCVIFMDEIDAIGGRR--FSEGTSADREIQRTLMELLNQMDGFDYLG------ 270

Query: 884  NPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCK----GIFQTDNVSDE 1045
              +  I++  N   TL   L+R GR+++    P  ++  R+ + K     + +   +  E
Sbjct: 271  --QTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYE 328

Query: 1046 SVVKIVDTFPGQSI 1087
            ++VK+ D   G  +
Sbjct: 329  ALVKLTDGTNGADL 342

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>P84562:RCA_POPEU Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast -|
            Populus euphratica (Euphrates poplar)
          Length = 32

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = +2

Query: 1058 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 1237
            +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1    LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

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>P46463:PEX1_PICPA Peroxisome biosynthesis protein PAS1 - Pichia pastoris (Yeast)|
          Length = 1157

 Score = 45.4 bits (106), Expect = 7e-04
 Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 7/199 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+     V A+ G+N I +   E+ +   G   + +R+ +  A    +  K 
Sbjct: 838  LYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA----QAAKP 893

Query: 728  CCLFINDLDAGAGRMG----GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 895
            C LF ++ D+ A + G    G T   VN  +   T M+ A+      L G+Y      R 
Sbjct: 894  CILFFDEFDSIAPKRGHDSTGVTDRVVNQML---TQMDGAEG-----LDGVYVLAATSRP 945

Query: 896  PIVVTGNDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCKGIFQTDNVSDESVVKIVDT 1069
             ++ +          L+R GR++K      P  DDR+ + + + +  NVS    +  V  
Sbjct: 946  DLIDSA---------LLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSV-- 994

Query: 1070 FPGQSIDFFGA-LRARVYD 1123
              G+   F GA L+A  Y+
Sbjct: 995  -AGECSGFSGADLQALAYN 1012

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>Q9ZPR1:CD48B_ARATH Cell division control protein 48 homolog B - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 603

 Score = 45.4 bits (106), Expect = 7e-04
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 2/163 (1%)
 Frame = +2

Query: 524  IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
            +K P  L ++G  G GK+     V  +   + I++S   +   +AGE  K++R+ + EA+
Sbjct: 53   LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112

Query: 704  DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEE 883
                  K   +FI+++D    R     +  V       TLM+ ++ P++           
Sbjct: 113  SHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMD-SNKPSS----------S 161

Query: 884  NPRVPIVVTGNDFSTLYAPLIRDGRMEKF--YWAPTRDDRIGV 1006
             PRV +V + N    +   L R GR +       P  +DR+ +
Sbjct: 162  APRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKI 204

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>Q9HRW6:PSMR2_HALSA Proteasome-activating nucleotidase 2 - Halobacterium salinarium|
           (Halobacterium halobium)
          Length = 407

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 38/143 (26%), Positives = 63/143 (44%)
 Frame = +2

Query: 554 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
           G  G GK+   + V ++   + I M+  EL     GE AKL+R  ++ A D     +   
Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD----HEPAV 245

Query: 734 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 913
           +FI+++DA A +   T   T  +  V  T+M +        L  M   +E   + I+   
Sbjct: 246 VFIDEIDAIASKR--TDSKTSGDAEVQRTMMQL--------LSEMDGFDERGDIRIIAAT 295

Query: 914 NDFSTLYAPLIRDGRMEKFYWAP 982
           N F  L   ++R GR ++    P
Sbjct: 296 NRFDMLDRAILRPGRFDRLIEVP 318

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>Q6LWR0:PSMR_METMP Proteasome-activating nucleotidase - Methanococcus maripaludis|
          Length = 407

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 5/233 (2%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+   + V  +   + + +   EL     GE AKL+R  ++    + K+   
Sbjct: 187  LYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK----LAKEKSP 242

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
            C +FI+++DA A +   T   T  ++ V  TLM +        L  M   +    V I+ 
Sbjct: 243  CIIFIDEIDAVASKR--TESLTGGDREVQRTLMQL--------LAEMDGFDSRGDVKIIA 292

Query: 908  TGNDFSTLYAPLIRDGRMEKF--YWAPTRDDRIGVCKGIFQTDN---VSDESVVKIVDTF 1072
              N    L   ++R GR ++      P  D R+ + K   +  N   V    V KI +  
Sbjct: 293  ATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKGVDLREVAKIAENM 352

Query: 1073 PGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTV 1231
             G  +             E R+++          ++   ++   +++ P++TV
Sbjct: 353  VGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKE-KCSYDMPQLTV 404

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>O78516:FTSH_GUITH Cell division protease ftsH homolog - Guillardia theta (Cryptomonas|
           phi)
          Length = 631

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
 Frame = +2

Query: 437 NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 613
           N + G   A    +++V  L K    T    KIP  + + G  G GK+   + +  + G+
Sbjct: 173 NDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232

Query: 614 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
               +S  E      G  A  +R  +++A    K+   C +FI+++DA  GR  GT    
Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKA----KENSPCIVFIDEIDA-VGRQRGTGIGG 287

Query: 794 VNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
            N++          +   N  L  M   E N  + I+   N    L A L+R GR ++
Sbjct: 288 GNDE---------REQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDR 336

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>Q9HPF0:CDCH_HALSA Protein cdcH - Halobacterium salinarium (Halobacterium halobium)|
          Length = 742

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 40/152 (26%), Positives = 67/152 (44%)
 Frame = +2

Query: 512 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 691
           T   ++ P  + ++G  G GK+   + V  +   N I +   +L S   GE  K IRQ +
Sbjct: 489 TRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTF 548

Query: 692 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
           R+A  +        +F ++LD+ A   G T    V+ ++VN  L          +L G+ 
Sbjct: 549 RKARQVAP----TVIFFDELDSLAPGRGQTGGNNVSERVVNQLL---------TELDGL- 594

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             EE   V ++   N    +   LIR GR ++
Sbjct: 595 --EEMEEVMVIAATNRPDIIDPALIRSGRFDR 624

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>P62193:PRS4_RAT 26S protease regulatory subunit 4 - Rattus norvegicus (Rat)|
          Length = 440

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
 Frame = +2

Query: 524  IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
            IK P  + ++G  G GK+   + V  +     + +   EL     G+  KL+R+ +R A 
Sbjct: 216  IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275

Query: 704  DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 874
            +         +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  +
Sbjct: 276  EHAPS----IVFIDEIDA-----IGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 321

Query: 875  KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ--------TD 1030
            + +   V +++  N   TL   LIR GR+++    P  D++    K IFQ         D
Sbjct: 322  RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK--TKKRIFQIHTSRMTLAD 376

Query: 1031 NVSDESVVKIVDTFPGQSI 1087
            +V+ + ++   D   G  I
Sbjct: 377  DVTLDDLIMAKDDLSGADI 395

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>P62192:PRS4_MOUSE 26S protease regulatory subunit 4 - Mus musculus (Mouse)|
          Length = 440

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
 Frame = +2

Query: 524  IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
            IK P  + ++G  G GK+   + V  +     + +   EL     G+  KL+R+ +R A 
Sbjct: 216  IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275

Query: 704  DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 874
            +         +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  +
Sbjct: 276  EHAPS----IVFIDEIDA-----IGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 321

Query: 875  KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ--------TD 1030
            + +   V +++  N   TL   LIR GR+++    P  D++    K IFQ         D
Sbjct: 322  RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK--TKKRIFQIHTSRMTLAD 376

Query: 1031 NVSDESVVKIVDTFPGQSI 1087
            +V+ + ++   D   G  I
Sbjct: 377  DVTLDDLIMAKDDLSGADI 395

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>P62191:PRS4_HUMAN 26S protease regulatory subunit 4 - Homo sapiens (Human)|
          Length = 440

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
 Frame = +2

Query: 524  IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
            IK P  + ++G  G GK+   + V  +     + +   EL     G+  KL+R+ +R A 
Sbjct: 216  IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275

Query: 704  DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 874
            +         +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  +
Sbjct: 276  EHAPS----IVFIDEIDA-----IGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 321

Query: 875  KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ--------TD 1030
            + +   V +++  N   TL   LIR GR+++    P  D++    K IFQ         D
Sbjct: 322  RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK--TKKRIFQIHTSRMTLAD 376

Query: 1031 NVSDESVVKIVDTFPGQSI 1087
            +V+ + ++   D   G  I
Sbjct: 377  DVTLDDLIMAKDDLSGADI 395

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>Q9UVU5:PEX6_PICAN Peroxisomal biogenesis factor 6 - Pichia angusta (Yeast) (Hansenula|
            polymorpha)
          Length = 1135

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 6/188 (3%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +     +N   +   EL +   GE    +R+ +++A D     K C
Sbjct: 852  YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 907

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             +F ++LD+ A + G        NQ  +  +M+   +    +L GM   E    V +V  
Sbjct: 908  VIFFDELDSVAPKRG--------NQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGA 959

Query: 911  GNDFSTLYAPLIRDGRMEKFYW---APTRDDRIGVCKGI---FQTDNVSDESVVKIVDTF 1072
             N    L   L+R GR +K  +   A T + +  + + +   FQ D   D   +     F
Sbjct: 960  TNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPF 1019

Query: 1073 PGQSIDFF 1096
                 DF+
Sbjct: 1020 TYTGADFY 1027

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>P51327:FTSH_PORPU Cell division protease ftsH homolog - Porphyra purpurea|
          Length = 628

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 66/299 (22%), Positives = 115/299 (38%), Gaps = 12/299 (4%)
 Frame = +2

Query: 437  NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 613
            N + G   A     ++V  L +    T    KIP  + + G  G GK+   + +  + G+
Sbjct: 173  NDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232

Query: 614  NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
                +S  E      G  A  +R  +++A D       C +FI+++DA  GR  GT    
Sbjct: 233  PFFSISGSEFVEMFVGVGASRVRDLFKKAKD----NAPCIVFIDEIDA-VGRQRGTGVGG 287

Query: 794  VNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFY 973
             N++          +   N  L  M   E N  V ++   N    L + L+R GR ++  
Sbjct: 288  GNDE---------REQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQV 338

Query: 974  WAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEV------- 1132
                 D R  +        N   ES V + +T   ++  F GA  A + ++         
Sbjct: 339  SVDVPDFRGRLAILEVHAKNKKMESKVSL-ETIARRTPGFSGADLANLLNEAAILTARRR 397

Query: 1133 RKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGH----MLVQEQDNVKRVQL 1297
            +  +  + I+    R+V   +G    +     +    E GH     L++  D V++V L
Sbjct: 398  KSAMTMSEIDTSIDRVVAGLEGTPLIDSKSKRLIAYHEVGHAIIGSLLEHHDPVQKVTL 456

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>O14126:PRS6A_SCHPO 26S protease regulatory subunit 6A - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 438

 Score = 42.7 bits (99), Expect = 0.005
 Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
 Frame = +2

Query: 524  IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
            +K P    ++G  G GK+       A+     + ++A +L     G+ AKL+    R+A 
Sbjct: 216  VKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLV----RDAF 271

Query: 704  DMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 880
             + K+     +FI++LDA G  R          ++ V  T++ + +     QL G     
Sbjct: 272  ALAKEKSPAIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---S 320

Query: 881  ENPRVPIVVTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGV----CKGIFQTDNVSD 1042
             + RV ++   N   TL   L+R GR+++   +  P  + R+G+     + +   D+++ 
Sbjct: 321  SDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINW 380

Query: 1043 ESVVKIVDTFPG 1078
            E + +  D + G
Sbjct: 381  EELARSTDEYNG 392

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>O26824:PSMR_METTH Proteasome-activating nucleotidase - Methanobacterium|
            thermoautotrophicum
          Length = 410

 Score = 42.4 bits (98), Expect = 0.006
 Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+   + V  +     I + A E      GE A+L+R  +    ++ K+   
Sbjct: 190  LYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVF----ELAKEKSP 245

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
              +FI+++DA A +       T  ++ V  TLM +       +L G    E    V IV 
Sbjct: 246  SIIFIDEIDAVAAKR--LKSSTSGDREVQRTLMQLL-----AELDGF---ESRGNVGIVA 295

Query: 908  TGNDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCK----GIFQTDNVSDESVVKIVDT 1069
              N    L   L+R GR ++F     P  D R  + K    G+   + V  E + +I D 
Sbjct: 296  ATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDG 355

Query: 1070 FPGQSI 1087
              G  +
Sbjct: 356  ASGADL 361

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>Q90732:PRS4_CHICK 26S protease regulatory subunit 4 - Gallus gallus (Chicken)|
          Length = 440

 Score = 42.4 bits (98), Expect = 0.006
 Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
 Frame = +2

Query: 524  IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
            IK P  + ++G  G GK+   + V  +     + +   EL     G+  KL+R+ +R A 
Sbjct: 216  IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA- 274

Query: 704  DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 874
               ++     +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  +
Sbjct: 275  ---EEHGPSIVFIDEIDA-----IGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 321

Query: 875  KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ--------TD 1030
            + +   V +++  N   TL   LIR GR+++    P  D++    K IFQ         D
Sbjct: 322  RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK--TKKRIFQIHTSRMTLAD 376

Query: 1031 NVSDESVVKIVDTFPGQSI 1087
            +V+ + ++   D   G  I
Sbjct: 377  DVTLDELIMAKDDLSGADI 395

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>Q07844:RIX7_YEAST Ribosome biogenesis ATPase RIX7 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 837

 Score = 41.6 bits (96), Expect = 0.010
 Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
 Frame = +2

Query: 554  GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
            G  G GK+     +  ++ +  I +SA  + SG +GE  K IR  + EA  +      C 
Sbjct: 246  GPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAP----CL 301

Query: 734  LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 913
            +F +++DA   +  G  Q  +  ++V A L+   D  T          E+    P+++ G
Sbjct: 302  VFFDEIDAITPKRDGGAQREMERRIV-AQLLTSMDELT---------MEKTNGKPVIIIG 351

Query: 914  --NDFSTLYAPLIRDGRMEKFYW--APTRDDRIGVCKGIFQTDNVSDESVV---KIVDTF 1072
              N   +L A L R GR ++      P    R+ + K +  +DN+  +  +   K+    
Sbjct: 352  ATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKM--SDNLKIDGAIDFAKLAKLT 409

Query: 1073 PGQSIDFFGA-LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 1207
            PG    F GA L+A V         G+  I+ I +   N +  P T
Sbjct: 410  PG----FVGADLKALV------TAAGTCAIKRIFQTYANIKSTPTT 445



 Score = 40.4 bits (93), Expect = 0.023
 Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 10/217 (4%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            +WG  G GK+   + V  +   N I +   EL +   GE  + IRQ +  A   +     
Sbjct: 572  LWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVP---- 627

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
            C +F ++LDA   R   T+    ++++VN  L          +L G+     N R  I V
Sbjct: 628  CVIFFDELDALVPRR-DTSLSESSSRVVNTLL---------TELDGL-----NDRRGIFV 672

Query: 908  TG--NDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFP 1075
             G  N    +   ++R GR++K  F   P  ++++ + K + ++      S V   +   
Sbjct: 673  IGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIR 732

Query: 1076 GQSIDFFGA--LRARVYDDEV----RKWVGSTGIENI 1168
             +  + F    L A V +  V    RK+  S  I+++
Sbjct: 733  NEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSV 769

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>P49825:FTSH_ODOSI Cell division protease ftsH homolog - Odontella sinensis (Marine|
            centric diatom)
          Length = 644

 Score = 41.6 bits (96), Expect = 0.010
 Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 8/199 (4%)
 Frame = +2

Query: 512  TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 691
            T+   KIP  + + G  G GK+   + +  +  +    ++  E      G  A  +R  +
Sbjct: 212  TIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLF 271

Query: 692  REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQ 856
            ++A++       C +FI+++DA     GAG  GG  +                +   N  
Sbjct: 272  KKASE----NAPCIVFIDEIDAVGRERGAGVGGGNDE---------------REQTLNQL 312

Query: 857  LPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCKGIFQTD 1030
            L  M   +EN  V +V   N    L A L+R GR ++      P R  R+G+ K   +  
Sbjct: 313  LTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNK 372

Query: 1031 NV-SDESVVKIVDTFPGQS 1084
             +  D S+V++ +  PG S
Sbjct: 373  PLGEDVSLVQLANRTPGFS 391

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>P48601:PRS4_DROME 26S protease regulatory subunit 4 - Drosophila melanogaster (Fruit|
           fly)
          Length = 439

 Score = 41.2 bits (95), Expect = 0.013
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           IK P  + ++G  G GK+   + V  +     + +   EL     G+  KL+R+ +R A 
Sbjct: 215 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 274

Query: 704 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 874
           +         +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  +
Sbjct: 275 EHAPS----IVFIDEIDA-----VGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 320

Query: 875 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 997
           + +   V +++  N   TL   LIR GR+++    P  D++
Sbjct: 321 RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 358

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>Q9HNP9:PSMR1_HALSA Proteasome-activating nucleotidase 1 - Halobacterium salinarium|
           (Halobacterium halobium)
          Length = 411

 Score = 40.4 bits (93), Expect = 0.023
 Identities = 34/143 (23%), Positives = 63/143 (44%)
 Frame = +2

Query: 554 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
           G  G GK+   + V  +   + I M+  EL     GE ++L+R  +    ++ ++     
Sbjct: 193 GPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLF----ELAEQKDPAI 248

Query: 734 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 913
           +FI+++DA A +   T   T  +  V  T+M +        L  M   +E   + I+   
Sbjct: 249 IFIDEIDAVAAKR--TDSKTSGDAEVQRTMMQL--------LSEMDGFDERGDIRIIAAT 298

Query: 914 NDFSTLYAPLIRDGRMEKFYWAP 982
           N F  L + ++R GR ++    P
Sbjct: 299 NRFDMLDSAILRPGRFDRLIEVP 321

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>P33297:PRS6A_YEAST 26S protease regulatory subunit 6A - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 434

 Score = 40.4 bits (93), Expect = 0.023
 Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
 Frame = +2

Query: 524  IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
            I+ P    ++G  G GK+       A+     + ++A +L     GE AKL+    R+A 
Sbjct: 212  IRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLV----RDAF 267

Query: 704  DMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 880
             + K+     +FI++LDA G  R          ++ V  T++ + +     QL G     
Sbjct: 268  ALAKEKAPTIIFIDELDAIGTKRFDSEKS---GDREVQRTMLELLN-----QLDGF---S 316

Query: 881  ENPRVPIVVTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGV----CKGIFQTDNVSD 1042
             + RV ++   N    L   L+R GR+++   +  P+ D R  +     + +   D+++ 
Sbjct: 317  SDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINW 376

Query: 1043 ESVVKIVDTFPGQSI 1087
            + + +  D F G  +
Sbjct: 377  QELARSTDEFNGAQL 391

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>P46465:PRS6A_ORYSJ 26S protease regulatory subunit 6A homolog - Oryza sativa subsp.|
           japonica (Rice)
          Length = 429

 Score = 40.4 bits (93), Expect = 0.023
 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           I+ P  + ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A 
Sbjct: 207 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 262

Query: 704 DMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 880
            + K+   C +FI+++DA G  R          ++ V  T++ + +     QL G  + E
Sbjct: 263 QLAKEKSPCIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGFSSDE 314

Query: 881 ENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
              R+ ++   N    L   L+R GR+++
Sbjct: 315 ---RIKVIAATNRADILDPALMRSGRLDR 340

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>P46466:PRS4_ORYSJ 26S protease regulatory subunit 4 homolog - Oryza sativa subsp.|
            japonica (Rice)
          Length = 448

 Score = 40.4 bits (93), Expect = 0.023
 Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 11/199 (5%)
 Frame = +2

Query: 524  IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
            I+ P  + ++G  G GK+   + V        + +   EL     G+  KL+R+ +R A 
Sbjct: 224  IRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD 283

Query: 704  DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 874
            ++        +FI+++DA      GT +Y  ++   + +  T++ + +     QL G  +
Sbjct: 284  EL----SPSIVFIDEIDA-----VGTKRYDAHSGGEREIQRTMLELLN-----QLDGFDS 329

Query: 875  KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ--------TD 1030
            + +   V +++  N   +L   L+R GR+++    P  D  I   + IFQ         D
Sbjct: 330  RGD---VKVILATNRIESLDPALLRPGRIDRKIEFPLPD--IKTRRRIFQIHTSKMTLAD 384

Query: 1031 NVSDESVVKIVDTFPGQSI 1087
            +V+ E  V   D F G  I
Sbjct: 385  DVNLEEFVMTKDEFSGADI 403

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>Q55700:FTSH1_SYNY3 Cell division protease ftsH homolog 1 - Synechocystis sp. (strain PCC|
            6803)
          Length = 627

 Score = 40.4 bits (93), Expect = 0.023
 Identities = 62/281 (22%), Positives = 109/281 (38%), Gaps = 19/281 (6%)
 Frame = +2

Query: 512  TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 691
            T    KIP  + + G  G GK+   + +  + G+    +S  E      G  A  +R  +
Sbjct: 198  TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 257

Query: 692  REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQ 856
            ++A    K+   C +FI+++DA     GAG  GG  +                +   N  
Sbjct: 258  KKA----KENAPCLIFIDEIDAVGRQRGAGIGGGNDE---------------REQTLNQL 298

Query: 857  LPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTD 1030
            L  M   E N  + I+   N    L + L+R GR ++     AP    R  + +   +  
Sbjct: 299  LTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNK 358

Query: 1031 NVSDE-SVVKIVDTFPGQSIDFFGALRARVYDDEV-------RKWVGSTGIENIGKRLVN 1186
             ++ E S+  I    PG    F GA  A + ++         +  +    I++   R+V 
Sbjct: 359  KLAPEVSIDSIARRTPG----FSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVA 414

Query: 1187 SRDGPVTFEQPKMTVEKLLEYGHMLV----QEQDNVKRVQL 1297
              +G    +     +    E GH +V    ++ D V++V L
Sbjct: 415  GMEGTPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTL 455

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>P54776:PRS6A_SOLLC 26S protease regulatory subunit 6A homolog - Solanum lycopersicum|
            (Tomato) (Lycopersicon esculentum)
          Length = 423

 Score = 40.0 bits (92), Expect = 0.029
 Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 7/187 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A  + K+   
Sbjct: 209  LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKSP 264

Query: 728  CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 904
            C +FI+++DA G  R          ++ V  T++ + +     QL G      + R+ ++
Sbjct: 265  CIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGF---SSDDRIKVI 313

Query: 905  VTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDNVSD----ESVVKIVD 1066
               N    L   L+R GR+++   +  PT + R  + +   +  NV+     E + +  D
Sbjct: 314  AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTD 373

Query: 1067 TFPGQSI 1087
             F G  +
Sbjct: 374  DFNGAQL 380

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>O23894:PRS6A_BRACM 26S protease regulatory subunit 6A homolog - Brassica campestris|
            (Field mustard)
          Length = 424

 Score = 40.0 bits (92), Expect = 0.029
 Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A  + K+   
Sbjct: 210  LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKAP 265

Query: 728  CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 904
            C +FI+++DA G  R          ++ V  T++ + +     QL G  + E   R+ ++
Sbjct: 266  CIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGFSSDE---RIKVI 314

Query: 905  VTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDN----VSDESVVKIVD 1066
               N    L   L+R GR+++   +  PT + R  + +   +  N    V+ E + +  D
Sbjct: 315  AATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTD 374

Query: 1067 TFPGQSI 1087
             F G  +
Sbjct: 375  DFNGAQL 381

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>Q9DBY8:NVL_MOUSE Nuclear valosin-containing protein-like - Mus musculus (Mouse)|
          Length = 855

 Score = 40.0 bits (92), Expect = 0.029
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
 Frame = +2

Query: 554  GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
            G  G GK+   + V  + G+N I +   EL +   GE  + +RQ ++ A    K    C 
Sbjct: 621  GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 676

Query: 734  LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 913
            +F +++DA   R         +++   A++  +     N  L  M   E   +V I+   
Sbjct: 677  IFFDEVDALCPRR--------SDRETGASVRVV-----NQLLTEMDGLETRQQVFILAAT 723

Query: 914  NDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGI 1018
            N    +   ++R GR++K  F   P   DR+ + K I
Sbjct: 724  NRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTI 760



 Score = 33.5 bits (75), Expect = 2.8
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +2

Query: 554 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
           G  G GK+     +  ++ +  + ++A E+ SG +GE      Q+ RE  D       C 
Sbjct: 304 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES----EQKLRELFDQAVSNAPCI 359

Query: 734 LFINDLDA 757
           +FI+++DA
Sbjct: 360 VFIDEIDA 367

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>Q96TA2:YMEL1_HUMAN ATP-dependent metalloprotease YME1L1 - Homo sapiens (Human)|
          Length = 773

 Score = 39.7 bits (91), Expect = 0.038
 Identities = 44/171 (25%), Positives = 65/171 (38%), Gaps = 2/171 (1%)
 Frame = +2

Query: 485 VVHLSKN--FMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 658
           VV   KN    T+   K+P  + + G  G GK+     V  +  +     S  E +    
Sbjct: 354 VVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFV 413

Query: 659 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD 838
           G  A  IR  +REA    K    C +FI++LD+  G+   +  +  + Q +N  L     
Sbjct: 414 GVGASRIRNLFREA----KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAE--- 466

Query: 839 APTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 991
                    M   + N  V I+   N    L   LIR GR +     P  D
Sbjct: 467 ---------MDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 508

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>P33289:PEX6_PICPA Peroxisomal biogenesis factor 6 - Pichia pastoris (Yeast)|
          Length = 1165

 Score = 39.7 bits (91), Expect = 0.038
 Identities = 35/147 (23%), Positives = 61/147 (41%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +     +N   +   EL +   GE    +R+ ++ A D     K C
Sbjct: 858  YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARD----AKPC 913

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             +F ++LD+ A + G        NQ  +  +M+   +    +L GM   +    V +V  
Sbjct: 914  VVFFDELDSVAPKRG--------NQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGA 965

Query: 911  GNDFSTLYAPLIRDGRMEKFYWAPTRD 991
             N    L   L+R GR +K  +    D
Sbjct: 966  TNRPDLLDEALLRPGRFDKMLYLGVSD 992

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>O15381:NVL_HUMAN Nuclear valosin-containing protein-like - Homo sapiens (Human)|
          Length = 856

 Score = 39.7 bits (91), Expect = 0.038
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
 Frame = +2

Query: 554  GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
            G  G GK+   + V  + G+N I +   EL +   GE  + +RQ ++ A    K    C 
Sbjct: 622  GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 677

Query: 734  LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 913
            +F +++DA   R         +++   A++  +     N  L  M   E   +V I+   
Sbjct: 678  IFFDEVDALCPRR--------SDRETGASVRVV-----NQLLTEMDGLEARQQVFIMAAT 724

Query: 914  NDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGI 1018
            N    +   ++R GR++K  F   P   DR+ + K I
Sbjct: 725  NRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTI 761



 Score = 33.1 bits (74), Expect = 3.6
 Identities = 17/68 (25%), Positives = 36/68 (52%)
 Frame = +2

Query: 554 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
           G  G GK+     +  ++ +  + ++A E+ SG +GE  + +R+ + +A         C 
Sbjct: 305 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAV----SNAPCI 360

Query: 734 LFINDLDA 757
           +FI+++DA
Sbjct: 361 IFIDEIDA 368

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>O88967:YMEL1_MOUSE ATP-dependent metalloprotease YME1L1 - Mus musculus (Mouse)|
          Length = 715

 Score = 39.3 bits (90), Expect = 0.050
 Identities = 39/155 (25%), Positives = 59/155 (38%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           K+P  + + G  G GK+     V  +  +     S  E +    G  A  IR  +REA  
Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369

Query: 707 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 886
             K    C +FI++LD+  G+   +  +  + Q +N  L              M   + N
Sbjct: 370 --KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAE------------MDGFKPN 415

Query: 887 PRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 991
             V I+   N    L   LIR GR +     P  D
Sbjct: 416 EGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 450

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>Q8PY58:PSMR_METMA Proteasome-activating nucleotidase - Methanosarcina mazei|
           (Methanosarcina frisia)
          Length = 420

 Score = 38.9 bits (89), Expect = 0.066
 Identities = 38/145 (26%), Positives = 66/145 (45%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+   + V  +     I +   EL     G+ +KL+    RE  +M +K   
Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253

Query: 728 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
             +FI++LD+ A R    T  T  ++ V  TLM +       ++ G ++K +N R  I+ 
Sbjct: 254 SIIFIDELDSIAARRLNET--TGADREVQRTLMQLL-----AEMDG-FDKRKNIR--IIA 303

Query: 908 TGNDFSTLYAPLIRDGRMEKFYWAP 982
             N    L   ++R GR ++    P
Sbjct: 304 ATNRPDVLDPAILRPGRFDRLVHVP 328

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>Q8TI88:PSMR_METAC Proteasome-activating nucleotidase - Methanosarcina acetivorans|
          Length = 421

 Score = 38.9 bits (89), Expect = 0.066
 Identities = 38/145 (26%), Positives = 66/145 (45%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+   + V  +     I +   EL     G+ +KL+    RE  +M +K   
Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253

Query: 728 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
             +FI++LD+ A R    T  T  ++ V  TLM +       ++ G ++K +N R  I+ 
Sbjct: 254 SIIFIDELDSIAARRLNET--TGADREVQRTLMQLL-----AEMDG-FDKRKNIR--IIA 303

Query: 908 TGNDFSTLYAPLIRDGRMEKFYWAP 982
             N    L   ++R GR ++    P
Sbjct: 304 ATNRPDVLDPAILRPGRFDRLVHVP 328

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>Q1XDF9:FSTH_PORYE Cell division protease ftsH homolog - Porphyra yezoensis|
          Length = 628

 Score = 38.9 bits (89), Expect = 0.066
 Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 1/178 (0%)
 Frame = +2

Query: 437 NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 613
           N + G   A     ++V  L +    T    KIP  + + G  G GK+   + +  +  +
Sbjct: 173 NDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEASV 232

Query: 614 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
               +S  E      G  A  +R  +++A D       C +FI+++DA  GR  GT    
Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKAKD----NAPCIVFIDEIDA-VGRQRGTGVGG 287

Query: 794 VNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
            N++          +   N  L  M   E N  V ++   N    L + L+R GR ++
Sbjct: 288 GNDE---------REQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDR 336

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>Q6BS73:PEX6_DEBHA Peroxisomal biogenesis factor 6 - Debaryomyces hansenii (Yeast)|
            (Torulaspora hansenii)
          Length = 1198

 Score = 38.5 bits (88), Expect = 0.086
 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +     +N   +   EL +   GE    +R+ +++A D     K C
Sbjct: 878  YGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 933

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             +F ++LD+ A + G        NQ  +  +M+   +    +L GM    E     + V 
Sbjct: 934  VIFFDELDSVAPKRG--------NQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVV 985

Query: 911  G--NDFSTLYAPLIRDGRMEKFYWAPTRD 991
            G  N    L   L+R GR +K  +    D
Sbjct: 986  GATNRPDLLDEALLRPGRFDKMLYLGISD 1014

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>P72991:FTSH4_SYNY3 Cell division protease ftsH homolog 4 - Synechocystis sp. (strain|
           PCC 6803)
          Length = 616

 Score = 38.5 bits (88), Expect = 0.086
 Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+   + V  + G+    +S  E      G  A  +R  + +A  
Sbjct: 192 KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQA-- 249

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K    C +FI+++DA     GAG  GG  +                +   N  L  M 
Sbjct: 250 --KANAPCIVFIDEIDAVGRQRGAGLGGGNDE---------------REQTLNQLLTEMD 292

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  + IV   N    L + L+R GR ++
Sbjct: 293 GFEGNTGIIIVAATNRPDVLDSALMRPGRFDR 324

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>P73179:FTSH2_SYNY3 Cell division protease ftsH homolog 2 - Synechocystis sp. (strain|
           PCC 6803)
          Length = 665

 Score = 38.5 bits (88), Expect = 0.086
 Identities = 38/147 (25%), Positives = 61/147 (41%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+   + +  + G+    +S  E      G  A  +R  +++A  
Sbjct: 242 KIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA-- 299

Query: 707 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 886
             K+   C +FI+++DA  GR  G   Y   N     TL        N  L  M   E N
Sbjct: 300 --KENAPCLVFIDEIDA-VGRQRG-VGYGGGNDEREQTL--------NQLLTEMDGFEGN 347

Query: 887 PRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             + ++   N    L   L+R GR ++
Sbjct: 348 SGIIVIAATNRPDVLDLALLRPGRFDR 374

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>O28303:PSMR_ARCFU Proteasome-activating nucleotidase - Archaeoglobus fulgidus|
          Length = 398

 Score = 38.1 bits (87), Expect = 0.11
 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+   + V  +     I +   E      GE A+L+    RE   + K+   
Sbjct: 180  LYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLV----REVFQLAKEKAP 235

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
              +FI++LDA A R   T   T  ++ V  T+M +       +L G      +PR  + V
Sbjct: 236  SIIFIDELDAIAARR--TNSDTSGDREVQRTMMQLL-----AELDGF-----DPRGDVKV 283

Query: 908  TG--NDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCK 1012
             G  N    L   ++R GR ++      PT + RI + K
Sbjct: 284  IGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFK 322

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>P49541:YCF46_ODOSI Uncharacterized AAA domain-containing protein ycf46 - Odontella|
           sinensis (Marine centric diatom)
          Length = 497

 Score = 37.7 bits (86), Expect = 0.15
 Identities = 34/154 (22%), Positives = 66/154 (42%)
 Frame = +2

Query: 515 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYR 694
           LP  +  L++GI   +G GKS   + +  +  +  + +  G L  G  GE       R R
Sbjct: 256 LPTPRGLLLIGI---QGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGES----ESRLR 308

Query: 695 EAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 874
           +  D+ +    C L+I+++D              +N+++ AT ++             + 
Sbjct: 309 QMIDVAETLSPCILWIDEMDKAFSNNDSRGDSGTSNRVL-ATFIS-------------WL 354

Query: 875 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYW 976
            E+   V +V T N+   L   +IR GR ++ ++
Sbjct: 355 SEKTKPVFVVATANNVDLLPLEIIRKGRFDEIFF 388

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>Q18787:PRS7_CAEEL Probable 26S protease regulatory subunit 7 - Caenorhabditis elegans|
          Length = 435

 Score = 37.7 bits (86), Expect = 0.15
 Identities = 33/140 (23%), Positives = 62/140 (44%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 216 LYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 271

Query: 728 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
           C +F +++DA  G      Q   N   V  T++ + +     QL G    +    + +++
Sbjct: 272 CLIFFDEIDAVGGARFDDGQGGDNE--VQRTMLELIN-----QLDGF---DPRGNIKVLM 321

Query: 908 TGNDFSTLYAPLIRDGRMEK 967
             N   TL   L+R GR+++
Sbjct: 322 ATNRPDTLDPALMRPGRLDR 341

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>O04019:PRS6A_ARATH 26S protease regulatory subunit 6A homolog - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 419

 Score = 37.7 bits (86), Expect = 0.15
 Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           I+ P  + ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A 
Sbjct: 197 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 252

Query: 704 DMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 880
            + K+   C +FI+++DA G  R          ++ V  T++ + +     QL G     
Sbjct: 253 LLAKEKSPCIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGF---S 301

Query: 881 ENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
            + R+ ++   N    L   L+R GR+++
Sbjct: 302 SDDRIKVIAATNRADILDPALMRSGRLDR 330

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>Q6CPV1:PEX6_KLULA Peroxisomal biogenesis factor 6 - Kluyveromyces lactis (Yeast)|
            (Candida sphaerica)
          Length = 1000

 Score = 37.7 bits (86), Expect = 0.15
 Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 3/187 (1%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + + +   +N   +   EL +   GE    +R+ +++A D     K C
Sbjct: 741  YGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 796

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             +F ++LD+ A + G        NQ  +  +M+   +    +L GM +  +   V ++  
Sbjct: 797  VIFFDELDSVAPKRG--------NQGDSGGVMDRIVSQLLAELDGMSSGGDG--VFVIGA 846

Query: 911  GNDFSTLYAPLIRDGRMEKFYW---APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQ 1081
             N    L   L+R GR +K  +   + T   +  + K +  T   + ES + I+D     
Sbjct: 847  TNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIKAL--TRKFTLESGIDILDIAKKC 904

Query: 1082 SIDFFGA 1102
              ++ GA
Sbjct: 905  PFNYTGA 911

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>P24004:PEX1_YEAST Peroxisome biosynthesis protein PAS1 - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 1043

 Score = 37.7 bits (86), Expect = 0.15
 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+     V  + G+N I +   E+ +   G   + IR+ +  A  +    K 
Sbjct: 736  LYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSV----KP 791

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
            C LF ++ D+ A + G  +   V +++VN  L  +  A     L G+Y      R  ++ 
Sbjct: 792  CILFFDEFDSIAPKRGHDST-GVTDRVVNQLLTQMDGAE---GLDGVYILAATSRPDLID 847

Query: 908  TGNDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCKGI 1018
            +          L+R GR++K      PT  +R+ + + I
Sbjct: 848  SA---------LLRPGRLDKSVICNIPTESERLDILQAI 877

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>P33299:PRS7_YEAST 26S protease regulatory subunit 7 homolog - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 467

 Score = 37.4 bits (85), Expect = 0.19
 Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 5/161 (3%)
 Frame = +2

Query: 500 KNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 679
           + F TL  I  P  + ++G  G GK+     V  +     I +   EL     GE A+++
Sbjct: 233 ERFATL-GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMV 291

Query: 680 RQRYREAADMIKKGKMCCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAP 844
           R+ +    +M +  K C +F +++DA  G       GG  +       V  T++ +    
Sbjct: 292 RELF----EMARTKKACIIFFDEIDAVGGARFDDGAGGDNE-------VQRTMLELI--- 337

Query: 845 TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
              QL G    +    + ++   N  +TL   L+R GR+++
Sbjct: 338 --TQLDGF---DPRGNIKVMFATNRPNTLDPALLRPGRIDR 373

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>P40327:PRS4_YEAST 26S protease regulatory subunit 4 homolog - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 437

 Score = 37.4 bits (85), Expect = 0.19
 Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           IK P  + ++G  G GK+   + V  +     + +   EL     G+  +L RQ ++ A 
Sbjct: 213 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAG 272

Query: 704 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 874
           +         +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  +
Sbjct: 273 ENAPS----IVFIDEIDAI-----GTKRYDSNSGGEREIQRTMLELLN-----QLDGFDD 318

Query: 875 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
           + +   V +++  N   TL   LIR GR+++
Sbjct: 319 RGD---VKVIMATNKIETLDPALIRPGRIDR 346

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>Q09803:VPS4_SCHPO Suppressor protein of bem1/bed5 double mutants -|
           Schizosaccharomyces pombe (Fission yeast)
          Length = 432

 Score = 37.0 bits (84), Expect = 0.25
 Identities = 21/73 (28%), Positives = 40/73 (54%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GKS+  + V  + G     +S+ +L S   GE  +L+RQ +    +M ++ K 
Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLF----EMAREQKP 222

Query: 728 CCLFINDLDAGAG 766
             +FI+++D+  G
Sbjct: 223 SIIFIDEIDSLCG 235

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>O16368:PRS4_CAEEL Probable 26S protease regulatory subunit 4 - Caenorhabditis elegans|
          Length = 443

 Score = 37.0 bits (84), Expect = 0.25
 Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           I+ P  + ++G  G GK+   + V  +     + +   EL     G+  K++R+ +R A 
Sbjct: 219 IRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVA- 277

Query: 704 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 874
              ++     +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  +
Sbjct: 278 ---EENAPSIVFIDEIDAV-----GTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 324

Query: 875 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 997
           + +   V +++  N   +L   LIR GR+++    P  D++
Sbjct: 325 RGD---VKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEK 362

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>P52917:VPS4_YEAST Vacuolar protein sorting-associated protein 4 - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 437

 Score = 36.6 bits (83), Expect = 0.33
 Identities = 22/76 (28%), Positives = 39/76 (51%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GKS+  + V  +       +S+ +L S   GE  KL++Q +     M ++ K 
Sbjct: 171 LYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFA----MARENKP 226

Query: 728 CCLFINDLDAGAGRMG 775
             +FI+++DA  G  G
Sbjct: 227 SIIFIDEVDALTGTRG 242

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>Q8TX03:PSMR_METKA Proteasome-activating nucleotidase - Methanopyrus kandleri|
          Length = 436

 Score = 36.6 bits (83), Expect = 0.33
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 1/150 (0%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+   + V        I ++A EL     GE A+L+R+ +    ++ ++   
Sbjct: 218 LYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELF----ELAREKAP 273

Query: 728 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 904
             +FI+++DA GA RM   T     ++ V  TL  +        L  M   +    + ++
Sbjct: 274 SIIFIDEIDAIGARRMRDATS---GDREVQRTLTQL--------LAEMDGFDPLDDIKVI 322

Query: 905 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDD 994
              N    L   L+R GR ++    P  D+
Sbjct: 323 AATNRKDILDPALLRPGRFDRHIKIPLPDE 352

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>P94304:FTSH_BACPF Cell division protease ftsH homolog - Bacillus pseudofirmus|
          Length = 679

 Score = 36.6 bits (83), Expect = 0.33
 Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           +IP  + + G  G GK+     V  + G+    +S  +      G  A  +R  +  A  
Sbjct: 197 RIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 254

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK   C +FI+++DA     GAG  GG   +    Q +N  L         V++ G  
Sbjct: 255 --KKNAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQLL---------VEMDGF- 299

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
               N  + I+   N    L   L+R GR ++
Sbjct: 300 --SANEGIIIIAATNRADILDPALLRPGRFDR 329

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>Q9P3A7:CDC48_SCHPO Cell division cycle protein 48 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 815

 Score = 36.6 bits (83), Expect = 0.33
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           IK P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 255 IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA- 313

Query: 704 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 874
              +K     +FI+++D+ A    +  G  +  V +Q++  TLM+   A +NV +    N
Sbjct: 314 ---EKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLL--TLMDGMKARSNVVVMAATN 368

Query: 875 K 877
           +
Sbjct: 369 R 369

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>P54609:CD48A_ARATH Cell division control protein 48 homolog A - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 809

 Score = 36.6 bits (83), Expect = 0.33
 Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 13/192 (6%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 520  YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF----DKARQSAPC 575

Query: 731  CLFINDLDA-------GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENP 889
             LF ++LD+       G+G  GG     V NQ++  T M+  +A   V + G  N+ +  
Sbjct: 576  VLFFDELDSIATQRGGGSGGDGGGAADRVLNQLL--TEMDGMNAKKTVFIIGATNRPD-- 631

Query: 890  RVPIVVTGNDFSTLYAPLIRDGRMEKFYW--APTRDDRIGVCKGIFQTDNVSDE----SV 1051
                         + + L+R GR+++  +   P  D R+ + K   +   ++ +    ++
Sbjct: 632  ------------IIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGAL 679

Query: 1052 VKIVDTFPGQSI 1087
             K    F G  I
Sbjct: 680  AKYTQGFSGADI 691

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>P0AAI4:FTSH_SHIFL Cell division protease ftsH - Shigella flexneri|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.42
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK   C +FI+++DA     GAG  GG   +    Q +N  L         V++ G  
Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  + ++   N    L   L+R GR ++
Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315

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>P63343:FTSH_SALTY Cell division protease ftsH - Salmonella typhimurium|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.42
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK   C +FI+++DA     GAG  GG   +    Q +N  L         V++ G  
Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  + ++   N    L   L+R GR ++
Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315

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>P63344:FTSH_SALTI Cell division protease ftsH - Salmonella typhi|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.42
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK   C +FI+++DA     GAG  GG   +    Q +N  L         V++ G  
Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  + ++   N    L   L+R GR ++
Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315

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>P0A4V8:FTSH_MYCTU Cell division protease ftsH homolog - Mycobacterium tuberculosis|
          Length = 760

 Score = 36.2 bits (82), Expect = 0.42
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + ++G  G GK+     V  + G+    +S  +      G  A  +R  + +A  
Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 811
             K+   C +F++++DA     GAG  GG    + T+N  +V
Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLV 291

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>P0A4V9:FTSH_MYCBO Cell division protease ftsH homolog - Mycobacterium bovis|
          Length = 760

 Score = 36.2 bits (82), Expect = 0.42
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + ++G  G GK+     V  + G+    +S  +      G  A  +R  + +A  
Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 811
             K+   C +F++++DA     GAG  GG    + T+N  +V
Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLV 291

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>P0AAI3:FTSH_ECOLI Cell division protease ftsH - Escherichia coli|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.42
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK   C +FI+++DA     GAG  GG   +    Q +N  L         V++ G  
Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  + ++   N    L   L+R GR ++
Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315

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>Q8X9L0:FTSH_ECO57 Cell division protease ftsH - Escherichia coli O157:H7|
          Length = 644

 Score = 36.2 bits (82), Expect = 0.42
 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK   C +FI+++DA     GAG  GG   +    Q +N  L         V++ G  
Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  + ++   N    L   L+R GR ++
Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315

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>Q9UQ90:SPG7_HUMAN Paraplegin - Homo sapiens (Human)|
          Length = 795

 Score = 35.8 bits (81), Expect = 0.55
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           K+P    + G  G GK+   + V  +  +  + M+  E      G  A  +R  ++EA  
Sbjct: 340 KVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEA-- 397

Query: 707 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 886
             +    C ++I+++DA  G+   TT    +N     TL  +      V++ GM   +  
Sbjct: 398 --RARAPCIVYIDEIDA-VGKKRSTTMSGFSNTEEEQTLNQLL-----VEMDGMGTTD-- 447

Query: 887 PRVPIVVTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDR 997
             V ++ + N    L   L+R GR+++  F   PT  +R
Sbjct: 448 -HVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQER 485

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>Q5QUB8:RECA_IDILO Protein recA - Idiomarina loihiensis|
          Length = 372

 Score = 35.8 bits (81), Expect = 0.55
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +2

Query: 590 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 769
           +V +   + P     GE+   + G  A+L+ Q  R+    IKK    C+FIN +    G 
Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNTMCIFINQIRMKIGV 200

Query: 770 MGGTTQYT 793
           M G  + T
Sbjct: 201 MFGNPETT 208

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>O42931:PRS7_SCHPO 26S protease regulatory subunit 7 homolog - Schizosaccharomyces|
           pombe (Fission yeast)
          Length = 438

 Score = 35.8 bits (81), Expect = 0.55
 Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 218 LYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 273

Query: 728 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 892
           C +F +++DA  G       GG  +       V  T++ +       QL G    +    
Sbjct: 274 CIIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELI-----TQLDGF---DPRGN 318

Query: 893 VPIVVTGNDFSTLYAPLIRDGRMEK 967
           + ++   N  +TL   L+R GR+++
Sbjct: 319 IKVLFATNRPNTLDEALMRPGRIDR 343

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>P36612:PRS4_SCHPO 26S protease regulatory subunit 4 homolog - Schizosaccharomyces|
           pombe (Fission yeast)
          Length = 448

 Score = 35.8 bits (81), Expect = 0.55
 Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           IK P  + ++G  G GK+   + V  +     + +   EL     G+  +L+RQ +  A 
Sbjct: 222 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAA- 280

Query: 704 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 874
              ++     +FI+++DA      GT +Y   +   + +  T++ + +     QL G   
Sbjct: 281 ---EEHSPSIVFIDEIDA-----IGTKRYDAQSGAEREIQRTMLELLN-----QLDGFDT 327

Query: 875 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
            + +  + +++  N  S L   LIR GR+++
Sbjct: 328 SQRD--IKVIMATNRISDLDPALIRPGRIDR 356

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>Q9CD58:FTSH_MYCLE Cell division protease ftsH homolog - Mycobacterium leprae|
          Length = 787

 Score = 35.8 bits (81), Expect = 0.55
 Identities = 24/85 (28%), Positives = 39/85 (45%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + ++G  G GK+     V  + G+    +S  +      G  A     R R+  D
Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA----SRVRDLFD 249

Query: 707 MIKKGKMCCLFINDLDAGAGRMGGT 781
             K+   C +F++++DA  GR  GT
Sbjct: 250 QAKQNSPCIIFVDEIDA-VGRQRGT 273

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>Q9LZF6:CD48E_ARATH Cell division control protein 48 homolog E - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 810

 Score = 35.8 bits (81), Expect = 0.55
 Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 520  YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF----DKARQSAPC 575

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             LF ++LD+ A + G +                 AD   N  L  M        V I+  
Sbjct: 576  VLFFDELDSIATQRGNSA----------GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 625

Query: 911  GNDFSTLYAPLIRDGRMEKFYW--APTRDDRIGVCKGIFQTDNVSDE----SVVKIVDTF 1072
             N    + + L+R GR+++  +   P  D R+ + K   +   V+ +    ++ K    F
Sbjct: 626  TNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGF 685

Query: 1073 PGQSI 1087
             G  I
Sbjct: 686  SGADI 690

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>P46472:PRS7_XENLA 26S protease regulatory subunit 7 - Xenopus laevis (African clawed|
           frog)
          Length = 433

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 269

Query: 728 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 892
           C +F +++DA  G       GG  +       V  T++ + +     QL G    +    
Sbjct: 270 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 314

Query: 893 VPIVVTGNDFSTLYAPLIRDGRMEK 967
           + +++  N   TL   L+R GR+++
Sbjct: 315 IKVLMATNRPDTLDPALMRPGRLDR 339

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>Q5R8D7:PRS7_PONPY 26S protease regulatory subunit 7 - Pongo pygmaeus (Orangutan)|
          Length = 433

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 269

Query: 728 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 892
           C +F +++DA  G       GG  +       V  T++ + +     QL G    +    
Sbjct: 270 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 314

Query: 893 VPIVVTGNDFSTLYAPLIRDGRMEK 967
           + +++  N   TL   L+R GR+++
Sbjct: 315 IKVLMATNRPDTLDPALMRPGRLDR 339

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>P46471:PRS7_MOUSE 26S protease regulatory subunit 7 - Mus musculus (Mouse)|
          Length = 433

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 269

Query: 728 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 892
           C +F +++DA  G       GG  +       V  T++ + +     QL G    +    
Sbjct: 270 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 314

Query: 893 VPIVVTGNDFSTLYAPLIRDGRMEK 967
           + +++  N   TL   L+R GR+++
Sbjct: 315 IKVLMATNRPDTLDPALMRPGRLDR 339

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>Q4R4R0:PRS7_MACFA 26S protease regulatory subunit 7 - Macaca fascicularis (Crab|
           eating macaque) (Cynomolgus monkey)
          Length = 433

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 269

Query: 728 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 892
           C +F +++DA  G       GG  +       V  T++ + +     QL G    +    
Sbjct: 270 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 314

Query: 893 VPIVVTGNDFSTLYAPLIRDGRMEK 967
           + +++  N   TL   L+R GR+++
Sbjct: 315 IKVLMATNRPDTLDPALMRPGRLDR 339

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>P35998:PRS7_HUMAN 26S protease regulatory subunit 7 - Homo sapiens (Human)|
          Length = 433

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 269

Query: 728 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 892
           C +F +++DA  G       GG  +       V  T++ + +     QL G    +    
Sbjct: 270 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 314

Query: 893 VPIVVTGNDFSTLYAPLIRDGRMEK 967
           + +++  N   TL   L+R GR+++
Sbjct: 315 IKVLMATNRPDTLDPALMRPGRLDR 339

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>Q5E9F9:PRS7_BOVIN 26S protease regulatory subunit 7 - Bos taurus (Bovine)|
          Length = 433

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 269

Query: 728 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 892
           C +F +++DA  G       GG  +       V  T++ + +     QL G    +    
Sbjct: 270 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 314

Query: 893 VPIVVTGNDFSTLYAPLIRDGRMEK 967
           + +++  N   TL   L+R GR+++
Sbjct: 315 IKVLMATNRPDTLDPALMRPGRLDR 339

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>Q920P5:KAD5_MOUSE Adenylate kinase isoenzyme 5 - Mus musculus (Mouse)|
          Length = 193

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
 Frame = +2

Query: 539 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 709
           I+ + GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 9   IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65

Query: 710 IKKGKMCCLFINDLDAGAGRMGG 778
           +  G +  L    + A  G   G
Sbjct: 66  VPSGVVLELLKEAMVASLGNTKG 88

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>Q9Y6K8:KAD5_HUMAN Adenylate kinase isoenzyme 5 - Homo sapiens (Human)|
          Length = 198

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
 Frame = +2

Query: 539 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 709
           I+ I GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 13  IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69

Query: 710 IKKGKMCCLFINDLDAGAGRMGG 778
           +  G +  L    + A  G   G
Sbjct: 70  VPSGIVLELLKEAMVASLGDTRG 92

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>P73437:FTSH3_SYNY3 Cell division protease ftsH homolog 3 - Synechocystis sp. (strain|
           PCC 6803)
          Length = 628

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 45/197 (22%), Positives = 75/197 (38%), Gaps = 8/197 (4%)
 Frame = +2

Query: 401 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK--NFMTLPN------IKIPLILGIWG 556
           YV     K  FD+  G        +++    LS+  +F+  P        KIP  + + G
Sbjct: 163 YVEGDSTKVTFDDVAG--------VEEAKTELSEVVDFLKFPQRYTALGAKIPKGVLLVG 214

Query: 557 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCL 736
             G GK+   +    + G+   ++S  E      G  A  +R  + +A    KK   C +
Sbjct: 215 PPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQA----KKQAPCIV 270

Query: 737 FINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGN 916
           FI++LDA  G+   +  +   N     TL  +          G         V ++   N
Sbjct: 271 FIDELDA-IGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAG-------ATVIVLAATN 322

Query: 917 DFSTLYAPLIRDGRMEK 967
              TL   L+R GR ++
Sbjct: 323 RPETLDPALLRPGRFDR 339

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>P25694:CDC48_YEAST Cell division control protein 48 - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 835

 Score = 35.4 bits (80), Expect = 0.72
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           IK P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 245 IKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEA- 303

Query: 704 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 874
              +K     +FI+++D+ A    +  G  +  V +Q++  TLM+   A +NV +    N
Sbjct: 304 ---EKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLL--TLMDGMKARSNVVVIAATN 358

Query: 875 K 877
           +
Sbjct: 359 R 359

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>O78439:YCF46_GUITH Uncharacterized AAA domain-containing protein ycf46 - Guillardia|
           theta (Cryptomonas phi)
          Length = 506

 Score = 35.0 bits (79), Expect = 0.95
 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 3/154 (1%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           + IP  L + G +G GKS   + +  +  +  + +  G L  G  GE    +RQ  + A 
Sbjct: 272 LPIPKGLLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAE 331

Query: 704 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY---N 874
            +      C L+I+++D         T    NN           D+ T  ++ G +    
Sbjct: 332 TI----SPCILWIDEIDK------AFTGSNFNN-----------DSGTTKRVFGTFITWL 370

Query: 875 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYW 976
            E+   V +V T N+  +L   L+R GR ++ ++
Sbjct: 371 SEKKSPVFVVATANNIDSLPPELLRKGRFDEVFF 404

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>Q63347:PRS7_RAT 26S protease regulatory subunit 7 - Rattus norvegicus (Rat)|
          Length = 433

 Score = 35.0 bits (79), Expect = 0.95
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELF----EMARTKKA 269

Query: 728 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 892
           C +F +++DA  G       GG  +       V  T++ + +     QL G    +    
Sbjct: 270 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 314

Query: 893 VPIVVTGNDFSTLYAPLIRDGRMEK 967
           + +++  N   TL   L+R GR+++
Sbjct: 315 IKVLMATNRPDTLDPALMRPGRLDR 339

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>Q63569:PRS6A_RAT 26S protease regulatory subunit 6A - Rattus norvegicus (Rat)|
          Length = 439

 Score = 35.0 bits (79), Expect = 0.95
 Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 7/184 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A  + K+   
Sbjct: 225  MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 280

Query: 728  CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 904
              +FI++LDA G  R          ++ V  T++ + +     QL G    + N +V ++
Sbjct: 281  SIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---QPNTQVKVI 329

Query: 905  VTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDNVSD----ESVVKIVD 1066
               N    L   L+R GR+++   +  P  + R  + +   +  NVS     E + +  D
Sbjct: 330  AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 389

Query: 1067 TFPG 1078
             F G
Sbjct: 390  DFNG 393

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>O88685:PRS6A_MOUSE 26S protease regulatory subunit 6A - Mus musculus (Mouse)|
          Length = 442

 Score = 35.0 bits (79), Expect = 0.95
 Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 7/184 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A  + K+   
Sbjct: 228  MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 283

Query: 728  CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 904
              +FI++LDA G  R          ++ V  T++ + +     QL G    + N +V ++
Sbjct: 284  SIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---QPNTQVKVI 332

Query: 905  VTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDNVSD----ESVVKIVD 1066
               N    L   L+R GR+++   +  P  + R  + +   +  NVS     E + +  D
Sbjct: 333  AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 392

Query: 1067 TFPG 1078
             F G
Sbjct: 393  DFNG 396

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>P17980:PRS6A_HUMAN 26S protease regulatory subunit 6A - Homo sapiens (Human)|
          Length = 439

 Score = 35.0 bits (79), Expect = 0.95
 Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 7/184 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A  + K+   
Sbjct: 225  MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 280

Query: 728  CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 904
              +FI++LDA G  R          ++ V  T++ + +     QL G    + N +V ++
Sbjct: 281  SIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---QPNTQVKVI 329

Query: 905  VTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDNVSD----ESVVKIVD 1066
               N    L   L+R GR+++   +  P  + R  + +   +  NVS     E + +  D
Sbjct: 330  AATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTD 389

Query: 1067 TFPG 1078
             F G
Sbjct: 390  DFNG 393

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>P59652:FTSH_STRR6 Cell division protease ftsH homolog - Streptococcus pneumoniae|
           (strain ATCC BAA-255 / R6)
          Length = 652

 Score = 35.0 bits (79), Expect = 0.95
 Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           +IP  + + G  G GK+   + V  + G+    +S  +      G  A  +R  + +A  
Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK     +FI+++DA     G G  GG  +     Q +N  L         +++ G  
Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDE---REQTLNQLL---------IEMDGF- 320

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  + ++   N    L   L+R GR ++
Sbjct: 321 --EGNEGIIVIAATNRSDVLDPALLRPGRFDR 350

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>O69076:FTSH_STRPN Cell division protease ftsH homolog - Streptococcus pneumoniae|
          Length = 652

 Score = 35.0 bits (79), Expect = 0.95
 Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           +IP  + + G  G GK+   + V  + G+    +S  +      G  A  +R  + +A  
Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK     +FI+++DA     G G  GG  +     Q +N  L         +++ G  
Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDE---REQTLNQLL---------IEMDGF- 320

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  + ++   N    L   L+R GR ++
Sbjct: 321 --EGNEGIIVIAATNRSDVLDPALLRPGRFDR 350

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>P37476:FTSH_BACSU Cell division protease ftsH homolog - Bacillus subtilis|
          Length = 637

 Score = 35.0 bits (79), Expect = 0.95
 Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           +IP  + + G  G GK+   +    + G+    +S  +      G  A  +R  +  A  
Sbjct: 192 RIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 249

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK   C +FI+++DA     GAG  GG   +    Q +N  L         V++ G  
Sbjct: 250 --KKNAPCLIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQLL---------VEMDGF- 294

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
               N  + I+   N    L   L+R GR ++
Sbjct: 295 --SANEGIIIIAATNRADILDPALLRPGRFDR 324

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>Q8G5R1:CLPX_BIFLO ATP-dependent Clp protease ATP-binding subunit clpX -|
           Bifidobacterium longum
          Length = 472

 Score = 35.0 bits (79), Expect = 0.95
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
 Frame = +2

Query: 554 GGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAAD-MIKKGKM 727
           G  G GK++  + +   M +  ++  A  L E+G  G+  + + QR  +AAD  + + + 
Sbjct: 154 GPTGVGKTYLAQALARVMNVPFVITDATTLTEAGYVGDDVETVLQRLLQAADGDVSRAQH 213

Query: 728 CCLFINDLDAGAGRMGGTTQYT--VNNQMVNATLMNIADAP-TNVQLPGMYNKEE 883
             ++I+++D  A + G  T  T  V+ + V   L+ I +    +V L G    +E
Sbjct: 214 GIIYIDEIDKIARKSGENTSITRDVSGEGVQQALLKILEGTIASVPLEGTRKHKE 268

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>Q925S8:YMEL1_RAT ATP-dependent metalloprotease YME1L1 - Rattus norvegicus (Rat)|
          Length = 715

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 39/155 (25%), Positives = 60/155 (38%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           K+P  + + G  G GK+     V  +  +     S  E +    G  A  IR  +REA  
Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369

Query: 707 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 886
             K    C +FI++LD+  G+      +  + Q    T++ +        L  M   + N
Sbjct: 370 --KANAPCVIFIDELDSVGGKRIEFPMHPYSRQ----TIIQL--------LAEMDGFKPN 415

Query: 887 PRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 991
             V I+   N    L   LIR GR +     P  D
Sbjct: 416 EGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 450

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>P32795:YME1_YEAST Protein YME1 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 747

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 37/147 (25%), Positives = 58/147 (39%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           K+P  + + G  G GK+        + G++   MS  E +    G  AK IR  + +A  
Sbjct: 312 KLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQA-- 369

Query: 707 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 886
             +      +FI++LDA  G+     Q     Q +N  L         V+L G     + 
Sbjct: 370 --RSRAPAIIFIDELDAIGGKRNPKDQ-AYAKQTLNQLL---------VELDGF---SQT 414

Query: 887 PRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             + I+   N    L   L R GR +K
Sbjct: 415 SGIIIIGATNFPEALDKALTRPGRFDK 441

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>P54811:TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1 -|
           Caenorhabditis elegans
          Length = 809

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
 Frame = +2

Query: 551 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
           +G  G GK+   + +  +   N I +   EL +   GE    +R  +    D  +    C
Sbjct: 523 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF----DKARAAAPC 578

Query: 731 CLFINDLDA-------GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENP 889
            LF ++LD+       GAG  GG     V NQ++  T M+  +A  NV + G  N+ +  
Sbjct: 579 VLFFDELDSIAKARGGGAGGDGGGASDRVINQVL--TEMDGMNAKKNVFIIGATNRPDII 636

Query: 890 RVPIVVTGNDFSTLYAPL 943
              ++  G     +Y PL
Sbjct: 637 DPAVLRPGRLDQLIYIPL 654

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>O32377:RECA_CHRVI Protein recA - Chromatium vinosum (Allochromatium vinosum)|
          Length = 347

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 26/110 (23%), Positives = 49/110 (44%)
 Frame = +2

Query: 464 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 643
           P + +KL V+++   ++ P+      L I     +  +    +V +   + P     GE+
Sbjct: 101 PVYAEKLGVNMTDLLVSQPDTG-EQALEITDMLVRSGAVDVVVVDSVAALTPKAEIEGEM 159

Query: 644 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
              + G  A+L+ Q  R+    IK+   C +FIN +    G M G+ + T
Sbjct: 160 GDSHVGLQARLMSQALRKLTGNIKRSNCCVIFINQIRMKIGVMFGSPETT 209

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>Q68XR9:FTSH_RICTY Cell division protease ftsH homolog - Rickettsia typhi|
          Length = 637

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+   + +  +  +    +S  +      G  A  +R  + +   
Sbjct: 186 KIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQG-- 243

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K+   C +FI+++DA     G G  GG  +     Q +N  L         V++ G  
Sbjct: 244 --KRNAPCIIFIDEIDAVGRHRGIGMGGGNDE---REQTLNQML---------VEMDGF- 288

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  V I+   N    L   L+R GR ++
Sbjct: 289 --EANEGVVIIAATNRPDVLDRALLRPGRFDR 318

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>Q9ZEA2:FTSH_RICPR Cell division protease ftsH homolog - Rickettsia prowazekii|
          Length = 637

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+   + +  +  +    +S  +      G  A  +R  + +   
Sbjct: 186 KIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQG-- 243

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K+   C +FI+++DA     G G  GG  +     Q +N  L         V++ G  
Sbjct: 244 --KRNAPCIIFIDEIDAVGRHRGIGMGGGNDE---REQTLNQML---------VEMDGF- 288

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  V I+   N    L   L+R GR ++
Sbjct: 289 --EANEGVVIIAATNRPDVLDRALLRPGRFDR 318

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>Q4UN68:FTSH_RICFE Cell division protease ftsH homolog - Rickettsia felis (Rickettsia|
           azadi)
          Length = 635

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+   + +  +  +    +S  +      G  A  +R  + +   
Sbjct: 186 KIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQG-- 243

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K+   C +FI+++DA     G G  GG  +     Q +N  L         V++ G  
Sbjct: 244 --KRNAPCIIFIDEIDAVGRHRGIGMGGGNDE---REQTLNQML---------VEMDGF- 288

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  V I+   N    L   L+R GR ++
Sbjct: 289 --EANEGVVIIAATNRPDVLDRALLRPGRFDR 318

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>Q92JJ9:FTSH_RICCN Cell division protease ftsH homolog - Rickettsia conorii|
          Length = 637

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+   + +  +  +    +S  +      G  A  +R  + +   
Sbjct: 186 KIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQG-- 243

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K+   C +FI+++DA     G G  GG  +     Q +N  L         V++ G  
Sbjct: 244 --KRNAPCIIFIDEIDAVGRHRGIGMGGGNDE---REQTLNQML---------VEMDGF- 288

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  V I+   N    L   L+R GR ++
Sbjct: 289 --EANEGVVIIAATNRPDVLDRALLRPGRFDR 318

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>Q5Z974:FTSH_ORYSJ Cell division protease ftsH homolog, chloroplast precursor - Oryza|
           sativa subsp. japonica (Rice)
          Length = 686

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+     V  + G+     +A E      G  A  +R  + +A  
Sbjct: 263 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 320

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K    C +FI+++DA     GAG  GG  +     Q +N  L          ++ G  
Sbjct: 321 --KAKAPCIVFIDEIDAVGRQRGAGLGGGNDE---REQTINQLL---------TEMDGFA 366

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
               N  V ++   N    L A L+R GR ++
Sbjct: 367 G---NSGVIVLAATNRPDVLDAALLRPGRFDR 395

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>P46462:TERA_RAT Transitional endoplasmic reticulum ATPase - Rattus norvegicus (Rat)|
          Length = 806

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 517  YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 572

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             LF ++LD+ A   GG                  AD   N  L  M        V I+  
Sbjct: 573  VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSTKKNVFIIGA 622

Query: 911  GNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSD----ESVVKIVDTF 1072
             N    +   ++R GR+++  + P  D+  R+ + K   +   V+     E + K+ + F
Sbjct: 623  TNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGF 682

Query: 1073 PGQSI 1087
             G  +
Sbjct: 683  SGADL 687



 Score = 32.7 bits (73), Expect = 4.7
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293

Query: 704 DMIKKGKMCCLFINDLDA 757
              +K     +FI++LDA
Sbjct: 294 ---EKNAPAIIFIDELDA 308

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>P03974:TERA_PIG Transitional endoplasmic reticulum ATPase - Sus scrofa (Pig)|
          Length = 806

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 517  YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 572

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             LF ++LD+ A   GG                  AD   N  L  M        V I+  
Sbjct: 573  VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSTKKNVFIIGA 622

Query: 911  GNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSD----ESVVKIVDTF 1072
             N    +   ++R GR+++  + P  D+  R+ + K   +   V+     E + K+ + F
Sbjct: 623  TNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGF 682

Query: 1073 PGQSI 1087
             G  +
Sbjct: 683  SGADL 687



 Score = 32.7 bits (73), Expect = 4.7
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293

Query: 704 DMIKKGKMCCLFINDLDA 757
              +K     +FI++LDA
Sbjct: 294 ---EKNAPAIIFIDELDA 308

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>Q01853:TERA_MOUSE Transitional endoplasmic reticulum ATPase - Mus musculus (Mouse)|
          Length = 806

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 517  YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 572

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             LF ++LD+ A   GG                  AD   N  L  M        V I+  
Sbjct: 573  VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSTKKNVFIIGA 622

Query: 911  GNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSD----ESVVKIVDTF 1072
             N    +   ++R GR+++  + P  D+  R+ + K   +   V+     E + K+ + F
Sbjct: 623  TNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGF 682

Query: 1073 PGQSI 1087
             G  +
Sbjct: 683  SGADL 687



 Score = 32.7 bits (73), Expect = 4.7
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293

Query: 704 DMIKKGKMCCLFINDLDA 757
              +K     +FI++LDA
Sbjct: 294 ---EKNAPAIIFIDELDA 308

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>P55072:TERA_HUMAN Transitional endoplasmic reticulum ATPase - Homo sapiens (Human)|
          Length = 806

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 517  YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 572

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             LF ++LD+ A   GG                  AD   N  L  M        V I+  
Sbjct: 573  VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSTKKNVFIIGA 622

Query: 911  GNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSD----ESVVKIVDTF 1072
             N    +   ++R GR+++  + P  D+  R+ + K   +   V+     E + K+ + F
Sbjct: 623  TNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGF 682

Query: 1073 PGQSI 1087
             G  +
Sbjct: 683  SGADL 687



 Score = 32.7 bits (73), Expect = 4.7
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293

Query: 704 DMIKKGKMCCLFINDLDA 757
              +K     +FI++LDA
Sbjct: 294 ---EKNAPAIIFIDELDA 308

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>Q3ZBT1:TERA_BOVIN Transitional endoplasmic reticulum ATPase - Bos taurus (Bovine)|
          Length = 806

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 517  YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 572

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             LF ++LD+ A   GG                  AD   N  L  M        V I+  
Sbjct: 573  VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSTKKNVFIIGA 622

Query: 911  GNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSD----ESVVKIVDTF 1072
             N    +   ++R GR+++  + P  D+  R+ + K   +   V+     E + K+ + F
Sbjct: 623  TNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGF 682

Query: 1073 PGQSI 1087
             G  +
Sbjct: 683  SGADL 687



 Score = 32.7 bits (73), Expect = 4.7
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293

Query: 704 DMIKKGKMCCLFINDLDA 757
              +K     +FI++LDA
Sbjct: 294 ---EKNAPAIIFIDELDA 308

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>O52394:RECA_CHLAU Protein recA - Chloroflexus aurantiacus|
          Length = 351

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
 Frame = +2

Query: 584 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
           CE++     I+ I++ +           GE+     G  A+L+ Q  R+ +  I K +  
Sbjct: 131 CEMLVRSNAIDVIVIDSVAALVPRAEIEGEMGDSMPGMQARLMSQALRKLSGAISKSRTV 190

Query: 731 CLFINDLDAGAGRMGGTTQYTVNNQ 805
            +FIN L    G M GT + T   Q
Sbjct: 191 VIFINQLRMKIGVMLGTPETTTGGQ 215

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>O82150:FTSH_TOBAC Cell division protease ftsH homolog, chloroplast precursor -|
           Nicotiana tabacum (Common tobacco)
          Length = 714

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+     V  + G+     +A E      G  A  +R  + +A  
Sbjct: 284 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 341

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K    C +FI+++DA     GAG  GG  +     Q +N  L              M 
Sbjct: 342 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE---REQTINQLLTE------------MD 384

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
               N  V ++   N    L + L+R GR ++
Sbjct: 385 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 416

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>Q1RGP0:FTSH_RICBR Cell division protease ftsH homolog - Rickettsia bellii (strain|
           RML369-C)
          Length = 638

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+   + +  +  +    +S  +      G  A  +R  + +   
Sbjct: 186 KIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQG-- 243

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K+   C +FI+++DA     G G  GG  +     Q +N  L         V++ G  
Sbjct: 244 --KRNAPCIIFIDEIDAVGRHRGIGMGGGNDE---REQTLNQML---------VEMDGF- 288

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             E N  V I+   N    L   L+R GR ++
Sbjct: 289 --EANEGVVIIAATNRPDVLDNALLRPGRFDR 318

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>Q9FH02:FTSH2_ARATH Cell division protease ftsH homolog 2, chloroplast precursor -|
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 704

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+     V  + G+     +A E      G  A  +R  + +A  
Sbjct: 281 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 338

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K    C +FI+++DA     GAG  GG  +     Q +N  L              M 
Sbjct: 339 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE---REQTINQLLTE------------MD 381

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
               N  V ++   N    L + L+R GR ++
Sbjct: 382 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 413

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>Q39102:FTSH1_ARATH Cell division protease ftsH homolog 1, chloroplast precursor -|
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 716

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+     V  + G+     +A E      G  A  +R  + +A  
Sbjct: 293 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 350

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K    C +FI+++DA     GAG  GG  +     Q +N  L              M 
Sbjct: 351 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE---REQTINQLLTE------------MD 393

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
               N  V ++   N    L + L+R GR ++
Sbjct: 394 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 425

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>Q9L723:RECA_LISMO Protein recA - Listeria monocytogenes|
          Length = 348

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ + +I K K   +FIN +    G M G  + T
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207

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>Q71ZS2:RECA_LISMF Protein recA - Listeria monocytogenes serotype 4b (strain F2365)|
          Length = 348

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ + +I K K   +FIN +    G M G  + T
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207

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>Q92BV7:RECA_LISIN Protein recA - Listeria innocua|
          Length = 348

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ + +I K K   +FIN +    G M G  + T
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207

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>P62215:RECA_GEOSL Protein recA - Geobacter sulfurreducens|
          Length = 338

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+   +I K   C +FIN +    G M G  + T
Sbjct: 157 GEMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETT 209

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>O52393:RECA_CHLTE Protein recA - Chlorobium tepidum|
          Length = 346

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 805
           GE+     G  A+L+ Q  R+    I K    CLFIN L    G M G+ + T   +
Sbjct: 170 GEMGDSVVGLQARLMSQALRKLTGAISKSSSVCLFINQLRDKIGVMYGSPETTTGGK 226

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>O42586:PR6AB_XENLA 26S protease regulatory subunit 6A-B - Xenopus laevis (African clawed|
            frog)
          Length = 404

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A  + K+   
Sbjct: 190  MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFSLAKEKAP 245

Query: 728  CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
              +FI++LDA   +   + +    ++ V  T++ + +     QL G    +   +V ++ 
Sbjct: 246  SIIFIDELDAIGNKRFDSEK--AGDREVQRTMLELLN-----QLDGF---QPTTQVKVIA 295

Query: 908  TGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDNVSD----ESVVKIVDT 1069
              N    L   L+R GR+++   +  P  + R  + +   +  NVS     E + +  D 
Sbjct: 296  ATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDD 355

Query: 1070 FPG 1078
            F G
Sbjct: 356  FNG 358

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>O42587:PR6AA_XENLA 26S protease regulatory subunit 6A-A - Xenopus laevis (African|
           clawed frog)
          Length = 405

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A  + K+   
Sbjct: 209 MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 264

Query: 728 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 904
             +FI++LDA G  R          ++ V  T++ + +     QL G    + N +V ++
Sbjct: 265 SIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---QPNMQVKVI 313

Query: 905 VTGNDFSTLYAPLIRDGRMEK 967
              N    L   L+R GR+++
Sbjct: 314 AATNRVDILDPALLRSGRLDR 334

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>Q74Z13:PEX6_ASHGO Peroxisomal biogenesis factor 6 - Ashbya gossypii (Yeast)|
            (Eremothecium gossypii)
          Length = 1021

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 33/147 (22%), Positives = 61/147 (41%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + V     +N   +   EL +   GE    +R+ ++ A D     K C
Sbjct: 762  YGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----AKPC 817

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             +F ++LD+ A + G        NQ  +  +M+   +    +L G+    +   + ++  
Sbjct: 818  VIFFDELDSVAPKRG--------NQGDSGGVMDRIVSQLLAELDGLSTGGDG--LFVIGA 867

Query: 911  GNDFSTLYAPLIRDGRMEKFYWAPTRD 991
             N    L   L+R GR +K  +    D
Sbjct: 868  TNRPDLLDEALLRPGRFDKLLYLGISD 894

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>O61577:KTNA1_STRPU Katanin p60 ATPase-containing subunit - Strongylocentrotus purpuratus|
            (Purple sea urchin)
          Length = 516

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 37/184 (20%), Positives = 82/184 (44%), Gaps = 6/184 (3%)
 Frame = +2

Query: 554  GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
            G  G GK+   + V  + G     +S+  L S   GE  KL+R  +    +M +      
Sbjct: 274  GPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLF----EMARFYAPST 329

Query: 734  LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 913
            +FI+++D+   + G  +++  + ++ +  L+ +        + G    EE+ ++ +V+  
Sbjct: 330  IFIDEIDSICSKRGTGSEHEASRRVKSELLIQMDG------VSGPSAGEESSKMVMVLAA 383

Query: 914  NDFSTLYAPLIRDGRMEKFYWAPT-----RDDRIGV-CKGIFQTDNVSDESVVKIVDTFP 1075
             +F       +R  R+EK  + P      R+  + +  K +   D++  +S+ + +D + 
Sbjct: 384  TNFPWDIDEALR-RRLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYS 442

Query: 1076 GQSI 1087
            G  I
Sbjct: 443  GADI 446

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>P46469:FTSH_LACLA Cell division protease ftsH homolog - Lactococcus lactis subsp.|
           lactis (Streptococcus lactis)
          Length = 695

 Score = 33.9 bits (76), Expect = 2.1
 Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           +IP  + + G  G GK+   + V  + G+    +S  +      G  A  +R  +  A  
Sbjct: 224 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENA-- 281

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             KK     +FI+++DA     GAG  GG  +     Q +N  L         V++ G  
Sbjct: 282 --KKTAPSIIFIDEIDAVGRQRGAGLGGGNDE---REQTLNQLL---------VEMDGF- 326

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
            +++   V ++   N    L   L+R GR ++
Sbjct: 327 -QDDGNSVIVIAATNRSDVLDPALLRPGRFDR 357

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>Q7MHR4:RECA_VIBVY Protein recA - Vibrio vulnificus (strain YJ016)|
          Length = 349

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 24/110 (21%), Positives = 47/110 (42%)
 Frame = +2

Query: 464 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 643
           P +  KL V++ +  ++ P+      L I     +  +    +V +   + P     GE+
Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158

Query: 644 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
              + G  A+++ Q  R+    +K+    C+FIN +    G M G  + T
Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208

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>Q8DC51:RECA_VIBVU Protein recA - Vibrio vulnificus|
          Length = 349

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 24/110 (21%), Positives = 47/110 (42%)
 Frame = +2

Query: 464 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 643
           P +  KL V++ +  ++ P+      L I     +  +    +V +   + P     GE+
Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158

Query: 644 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
              + G  A+++ Q  R+    +K+    C+FIN +    G M G  + T
Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208

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>P45383:RECA_VIBCH Protein recA - Vibrio cholerae|
          Length = 354

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 24/110 (21%), Positives = 47/110 (42%)
 Frame = +2

Query: 464 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 643
           P +  KL V++ +  ++ P+      L I     +  +    +V +   + P     GE+
Sbjct: 100 PVYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158

Query: 644 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
              + G  A+++ Q  R+    +K+    C+FIN +    G M G  + T
Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208

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>P48296:RECA_THEAQ Protein recA - Thermus aquaticus|
          Length = 340

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 27/113 (23%), Positives = 45/113 (39%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVN 814
           GE+   + G  A+L+ Q  R+   ++ K     +FIN +    G M G  + T   +   
Sbjct: 156 GEMGDQHVGLQARLMSQALRKLTAVLSKSNTAAIFINQVREKVGVMYGNPETTPGGR--- 212

Query: 815 ATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFY 973
             L   +    +V+  G   K  N  V I V         AP  R+  +E ++
Sbjct: 213 -ALKFYSSVRLDVRKSGQPIKVGNEAVGIKVKVKVVKNKLAPPFREAELEIYF 264

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>P94190:RECA_AERS4 Protein recA - Aeromonas salmonicida (strain A449)|
          Length = 353

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +2

Query: 590 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 769
           +V +   + P     GE+   + G  A+L+ Q  R+    IK     C+FIN +    G 
Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKNANCLCIFINQIRMKIGV 200

Query: 770 MGGTTQYT 793
           M G+ + T
Sbjct: 201 MFGSPETT 208

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>P48292:RECA2_MYXXA Protein recA 2 - Myxococcus xanthus|
          Length = 358

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+    I K + C +FIN +    G M G  + T
Sbjct: 160 GEMGDAHMGVQARLMSQALRKLTGTIAKSQTCVIFINQIRMKIGVMFGNPETT 212

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>Q9YAC7:PSMR_AERPE Proteasome-activating nucleotidase - Aeropyrum pernix|
          Length = 409

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
 Frame = +2

Query: 554  GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
            G  G GK+   + V  +     I +   EL +   GE A+L+R+ +R A +         
Sbjct: 180  GPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPS----I 235

Query: 734  LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 913
            LFI+++DA A +       T  ++ V  T++ +       +L G    +    V ++   
Sbjct: 236  LFIDEIDAIASKR--VDIGTSGDREVQRTMLQLL-----AELDGF---DPLDNVKVIAAT 285

Query: 914  NDFSTLYAPLIRDGRMEKFYWAPT-----RDDRIGV-CKGIFQTDNVSDESVVKIVDTFP 1075
            N    +   ++R GR ++    P      R + +G+  +      +V  E++ K+ + F 
Sbjct: 286  NRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFS 345

Query: 1076 GQSI 1087
            G  +
Sbjct: 346  GADL 349

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>Q9PUL2:KTNA1_XENLA Katanin p60 ATPase-containing subunit - Xenopus laevis (African|
            clawed frog)
          Length = 486

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 9/187 (4%)
 Frame = +2

Query: 554  GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 733
            G  G GK+   + V  +       +S+  L S   GE  KL+R  +    +M +      
Sbjct: 246  GPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301

Query: 734  LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN---PRVPIV 904
            +FI+++D+   R G + ++  + + V A L+        VQ+ G+    EN    ++ +V
Sbjct: 302  IFIDEIDSICSRRGTSEEHEASRR-VKAELL--------VQMDGVGGASENEDPSKMVMV 352

Query: 905  VTGNDFSTLYAPLIRDGRMEKFYWAPT-----RDDRIGV-CKGIFQTDNVSDESVVKIVD 1066
            +   +F       +R  R+EK  + P      R++ + +  K +   D+V+ E + + +D
Sbjct: 353  LAATNFPWDIDEALR-RRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMD 411

Query: 1067 TFPGQSI 1087
             + G  I
Sbjct: 412  GYSGADI 418

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>Q8K9G8:FTSH_BUCAP Cell division protease ftsH - Buchnera aphidicola subsp. Schizaphis|
           graminum
          Length = 613

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  +  A  
Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHA-- 240

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             +K   C +FI+++DA     GAG  GG   +    Q +N  L         V++ G  
Sbjct: 241 --RKSAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             + N  V ++   N    L   L+R GR ++
Sbjct: 286 --DGNEGVILIAATNRPDVLDPALLRPGRFDR 315

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>P71377:FTSH1_HAEIN Cell division protease ftsH homolog 1 - Haemophilus influenzae|
          Length = 635

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+     +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 182 KIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 239

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 811
             KK   C +FI+++DA     GAG  GG    + T+N  +V
Sbjct: 240 --KKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 279

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>P20930:FILA_HUMAN Filaggrin - Homo sapiens (Human)|
          Length = 4061

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
 Frame = +1

Query: 619  HHDECRRAGEWERWRASQAHQAAVP*GCRHD----QEG*DVLPLHQRS*RWCG*DGRNH- 783
            HH E     +  R   S   Q+A P   R+      +  D     + S RW G   RNH 
Sbjct: 3505 HHHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHR 3564

Query: 784  -AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 879
             +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 3565 GSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSG 3599

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>Q920A7:AFG31_MOUSE AFG3-like protein 1 - Mus musculus (Mouse)|
          Length = 663

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 703
           KIP    + G  G GK+   +    +  +  I ++  E LE      PA     R R+  
Sbjct: 205 KIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPA-----RVRDMF 259

Query: 704 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNATLMNIADAPTNV 853
            M +K   C LFI+++DA     G G +GG ++   T+N  +V    M+  ++ TNV
Sbjct: 260 AMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVE---MDGFNSSTNV 313

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>P26348:RECA_VIBAN Protein recA - Vibrio anguillarum (Listonella anguillarum)|
          Length = 348

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 23/110 (20%), Positives = 47/110 (42%)
 Frame = +2

Query: 464 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 643
           P +  KL V++ +  ++ P+      L I     +  +    ++ +   + P     GE+
Sbjct: 100 PIYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAIDVIVIDSVAALTPKAEIEGEM 158

Query: 644 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
              + G  A+++ Q  R+    +K+    C+FIN +    G M G  + T
Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208

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>Q83TH3:RECA_LISWE Protein recA - Listeria welshimeri|
          Length = 348

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207

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>Q83TH4:RECA_LISSE Protein recA - Listeria seeligeri|
          Length = 348

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207

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>Q83TH2:RECA_LISIV Protein recA - Listeria ivanovii|
          Length = 348

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207

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>A2RI85:RECA_LACLM Protein recA - Lactococcus lactis subsp. cremoris (strain MG1363)|
          Length = 387

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+++ Q  R+ A  I K K   +FIN L    G M G+ + T
Sbjct: 171 GEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETT 223

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>P0C2U5:RECA_LACLC Protein recA - Lactococcus lactis subsp. cremoris (Streptococcus|
           cremoris)
          Length = 387

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+++ Q  R+ A  I K K   +FIN L    G M G+ + T
Sbjct: 171 GEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETT 223

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>Q895I5:RECA_CLOTE Protein recA - Clostridium tetani|
          Length = 350

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ A  I K     +FIN L    G M G+ + T
Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVGIMFGSPETT 208

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>P58254:RECA_CLOAB Protein recA - Clostridium acetobutylicum|
          Length = 349

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+    I K K   +FIN L    G M G  + T
Sbjct: 156 GEMGDSHVGLQARLMSQALRKLTGSINKSKCIAIFINQLREKVGIMFGNPETT 208

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>P29225:RECA_ACHLA Protein recA - Acholeplasma laidlawii|
          Length = 331

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +2

Query: 632 AGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           AG++ + + G  A+++ Q  R+ + +I K  +  +FIN +    G M G  + T
Sbjct: 156 AGDMSANHVGLQARMMSQAMRKMSGVISKSNVVAIFINQIREKVGVMFGNPETT 209

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>P0C2U4:RECA1_LACLA Protein recA, chromosomal - Lactococcus lactis subsp. lactis|
           (Streptococcus lactis)
          Length = 387

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+++ Q  R+ A  I K K   +FIN L    G M G+ + T
Sbjct: 171 GEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETT 223

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>Q96372:CDC48_CAPAN Cell division cycle protein 48 homolog - Capsicum annuum (Bell|
           pepper)
          Length = 805

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 33/148 (22%), Positives = 59/148 (39%)
 Frame = +2

Query: 551 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
           +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF----DKARQSAPC 576

Query: 731 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
            LF ++LD+ A + G +          +      AD   N  L  M        V I+  
Sbjct: 577 VLFFDELDSIATQRGSS----------SGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 626

Query: 911 GNDFSTLYAPLIRDGRMEKFYWAPTRDD 994
            N    +   L+R GR+++  + P  D+
Sbjct: 627 TNRPDIIDPALLRPGRLDQLIYIPLPDE 654

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>Q9SCN8:CD48D_ARATH Cell division control protein 48 homolog D - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 815

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 6/185 (3%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 521  YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQSAPC 576

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             LF ++LD+ A + G +                 AD   N  L  M        V I+  
Sbjct: 577  VLFFDELDSIATQRGNSV----------GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 626

Query: 911  GNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSDE----SVVKIVDTF 1072
             N    +   L+R GR+++  + P  D+  R  + K   +   V+ +    ++ K    F
Sbjct: 627  TNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGF 686

Query: 1073 PGQSI 1087
             G  I
Sbjct: 687  SGADI 691

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>P23787:TERA_XENLA Transitional endoplasmic reticulum ATPase - Xenopus laevis (African|
           clawed frog)
          Length = 805

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +2

Query: 524 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 703
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293

Query: 704 DMIKKGKMCCLFINDLDA 757
              +K     +FI++LDA
Sbjct: 294 ---EKNAPAIIFIDELDA 308



 Score = 32.3 bits (72), Expect = 6.1
 Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 2/174 (1%)
 Frame = +2

Query: 551  WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
            +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 517  YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 572

Query: 731  CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
             LF ++LD+ A   GG                  AD   N  L  M        V I+  
Sbjct: 573  VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSIKKNVFIIGA 622

Query: 911  GNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSDESVVKIVD 1066
             N    +   ++R GR+++  + P  D+  R+ + K      N+    V K VD
Sbjct: 623  TNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKA-----NLRKSPVAKDVD 671

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>Q87LR1:RECA_VIBPA Protein recA - Vibrio parahaemolyticus|
          Length = 347

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 24/110 (21%), Positives = 45/110 (40%)
 Frame = +2

Query: 464 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 643
           P +  KL V +    ++ P+      L I     +  +    +V +   + P     GE+
Sbjct: 100 PVYAKKLGVDIDALLVSQPDTG-EQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEM 158

Query: 644 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
              + G  A+++ Q  R+    +K+    C+FIN +    G M G  + T
Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208

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>Q8RA55:RECA_THETN Protein recA - Thermoanaerobacter tengcongensis|
          Length = 342

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ A +  K K   +FIN L    G M G  + T
Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGVTSKSKSIVVFINQLREKVGVMFGNPETT 208

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>Q8CXG7:RECA_OCEIH Protein recA - Oceanobacillus iheyensis|
          Length = 347

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETT 207

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>Q5WFX1:RECA_BACSK Protein recA - Bacillus clausii (strain KSM-K16)|
          Length = 350

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207

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>Q9KAA7:RECA_BACHD Protein recA - Bacillus halodurans|
          Length = 349

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207

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>P34123:PRS6B_DICDI 26S protease regulatory subunit 6B homolog - Dictyostelium discoideum|
            (Slime mold)
          Length = 403

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 3/169 (1%)
 Frame = +2

Query: 548  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
            ++G  G GK+   + V        I +   E      GE  +L+R  +R    + ++   
Sbjct: 189  LYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFR----LARENSP 244

Query: 728  CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 904
              +FI+++DA    R    T      Q +   L+N        Q+ G    + +  V ++
Sbjct: 245  AIIFIDEIDAIATKRFDAQTGADREVQRILMELLN--------QMDGF---DVSVNVKVI 293

Query: 905  VTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDNVSDE 1045
            +  N   TL   L+R GR+++   +  P R  +  + + I    N+SDE
Sbjct: 294  MATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDE 342

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>O67077:FTSH_AQUAE Cell division protease ftsH homolog - Aquifex aeolicus|
          Length = 634

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 34/150 (22%), Positives = 59/150 (39%)
 Frame = +2

Query: 548 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 727
           ++G  G GK+   + +  +  +  I +S  +      G  A  +R  +  A    KK   
Sbjct: 193 LYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETA----KKHAP 248

Query: 728 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 907
           C +FI+++DA  GR  G       +     TL        N  L  M   + +  + ++ 
Sbjct: 249 CIIFIDEIDA-VGRARGAIPVGGGHDEREQTL--------NQLLVEMDGFDTSDGIIVIA 299

Query: 908 TGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 997
             N    L   L+R GR ++  + P  D R
Sbjct: 300 ATNRPDILDPALLRPGRFDRQIFIPKPDVR 329

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>P54774:CDC48_SOYBN Cell division cycle protein 48 homolog - Glycine max (Soybean)|
          Length = 807

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 33/148 (22%), Positives = 58/148 (39%)
 Frame = +2

Query: 551 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
           +G  G GK+   + +  +   N I +   EL +   GE    +R+ +    D  ++   C
Sbjct: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF----DKARQSAPC 576

Query: 731 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
            LF ++LD+ A + G +                 AD   N  L  M        V I+  
Sbjct: 577 VLFFDELDSIATQRGSSV----------GDAGGAADRVLNQLLTEMDGMSAKKTVFIIGA 626

Query: 911 GNDFSTLYAPLIRDGRMEKFYWAPTRDD 994
            N    +   L+R GR+++  + P  D+
Sbjct: 627 TNRPDIIDPALLRPGRLDQLIYIPLPDE 654

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>Q8JZQ2:AFG32_MOUSE AFG3-like protein 2 - Mus musculus (Mouse)|
          Length = 802

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 703
           KIP    + G  G GK+   +    +  +  I +S  E LE      PA     R R+  
Sbjct: 338 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 392

Query: 704 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNATLMNIADAPTNVQLP 862
            + +K   C LFI+++DA     G G  GG ++   T+N  +V    M+  +  TNV   
Sbjct: 393 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVE---MDGFNTTTNV--- 446

Query: 863 GMYNKEENPRVPIVVTGNDFSTLYAP-LIRDGRMEK 967
                       +++ G +   +  P L+R GR ++
Sbjct: 447 ------------VILAGTNRPDILDPALLRPGRFDR 470

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>Q9Y4W6:AFG32_HUMAN AFG3-like protein 2 - Homo sapiens (Human)|
          Length = 797

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 703
           KIP    + G  G GK+   +    +  +  I +S  E LE      PA     R R+  
Sbjct: 339 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 393

Query: 704 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNATLMNIADAPTNVQLP 862
            + +K   C LFI+++DA     G G  GG ++   T+N  +V    M+  +  TNV   
Sbjct: 394 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVE---MDGFNTTTNV--- 447

Query: 863 GMYNKEENPRVPIVVTGNDFSTLYAP-LIRDGRMEK 967
                       +++ G +   +  P L+R GR ++
Sbjct: 448 ------------VILAGTNRPDILDPALLRPGRFDR 471

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>Q7UJJ0:RECA_RHOBA Protein recA - Rhodopirellula baltica|
          Length = 375

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 11/121 (9%)
 Frame = +2

Query: 464 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA--- 634
           P++  KL V L    ++ P+             G+     CE++     ++ I++ +   
Sbjct: 123 PSWAKKLGVELDSLLVSQPS------------SGEEAMQICEMLVKSNAVDVIIIDSVAA 170

Query: 635 --------GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 790
                   GE+   + G  A+L+ Q  R+    I K K   +FIN +    G M G+ + 
Sbjct: 171 LVPKAELEGEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQIREKVGVMFGSPET 230

Query: 791 T 793
           T
Sbjct: 231 T 231

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>P77925:RECA_PORGI Protein recA - Porphyromonas gingivalis (Bacteroides gingivalis)|
          Length = 340

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+     G  A+L+ Q  R+    I K    C+FIN L    G + G  + T
Sbjct: 165 GEMGDNKVGLHARLMSQALRKMTGAISKSNTTCIFINQLREKIGVLFGNPETT 217

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>Q6KCJ3:RECA_ENTMU Protein recA - Enterococcus mundtii|
          Length = 346

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208

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>Q6KCJ5:RECA_ENTHR Protein recA - Enterococcus hirae|
          Length = 346

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208

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>Q6KCJ6:RECA_ENTFC Protein recA - Enterococcus faecium (Streptococcus faecium)|
          Length = 349

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208

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>P42444:RECA_ENTFA Protein recA - Enterococcus faecalis (Streptococcus faecalis)|
          Length = 348

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+ + + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 156 GEMGASHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPETT 208

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>Q7ZX23:KCY_XENLA UMP-CMP kinase - Xenopus laevis (African clawed frog)|
          Length = 193

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 533 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 643
           PL++ + GG G GK  QCE +  K G     +SAG+L
Sbjct: 3   PLVVFVLGGPGAGKGTQCERIVQKYGYT--HLSAGDL 37

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>Q0SGR9:GLGB_RHOSR 1,4-alpha-glucan-branching enzyme - Rhodococcus sp. (strain RHA1)|
          Length = 732

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -2

Query: 1189 RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTD 1034
            RVH P  +V D  +ADP+A    V P+T S   V+   W   + L  R  T+
Sbjct: 197  RVHGPDGSVRD--KADPMAFATEVPPATASRVSVSTYEWNDAEWLAQRAATE 246

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>Q39444:FTSH_CAPAN Cell division protease ftsH homolog, chloroplast precursor -|
           Capsicum annuum (Bell pepper)
          Length = 662

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP    + G  G GK+     V  + G+     +A E      G  A  +R  +  A  
Sbjct: 261 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENA-- 318

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             K    C +FI+++DA     GAG  GG  +     Q +N  L              M 
Sbjct: 319 --KSKAPCIVFIDEIDAVGRQRGAGLGGGNDE---REQTINQLLTE------------MD 361

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
               N  V ++   N    L + L+R G+ ++
Sbjct: 362 GFSGNSGVIVLAATNRPDVLDSALLRPGKFDR 393

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>Q2KJI7:AFG32_BOVIN AFG3-like protein 2 - Bos taurus (Bovine)|
          Length = 805

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 703
           KIP    + G  G GK+   +    +  +  I +S  E LE      PA     R R+  
Sbjct: 340 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 394

Query: 704 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNATLMNIADAPTNVQLP 862
            + +K   C LFI+++DA     G G  GG ++   T+N  +V    M+  +  TNV + 
Sbjct: 395 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVE---MDGFNTTTNVVIL 451

Query: 863 GMYNKEE 883
              N+ +
Sbjct: 452 AGTNRPD 458

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>P54812:TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2 -|
           Caenorhabditis elegans
          Length = 810

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 33/148 (22%), Positives = 56/148 (37%)
 Frame = +2

Query: 551 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 730
           +G  G GK+   + +  +   N I +   EL +   GE    +R  +    D  +    C
Sbjct: 522 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF----DKARAAAPC 577

Query: 731 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 910
            LF ++LD+ A   GG+                 AD   N  L  M        V I+  
Sbjct: 578 VLFFDELDSIAKARGGSV----------GDAGGAADRVINQVLTEMDGMNAKKNVFIIGA 627

Query: 911 GNDFSTLYAPLIRDGRMEKFYWAPTRDD 994
            N    +   ++R GR+++  + P  D+
Sbjct: 628 TNRPDIIDPAVLRPGRLDQLIYIPLPDE 655

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>Q88UZ4:RECA_LACPL Protein recA - Lactobacillus plantarum|
          Length = 380

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  + K K   LFIN +    G M G  + T
Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208

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>Q6KCK3:RECA_LACPE Protein recA - Lactobacillus pentosus|
          Length = 378

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  + K K   LFIN +    G M G  + T
Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208

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>Q5FL82:RECA_LACAC Protein recA - Lactobacillus acidophilus|
          Length = 363

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G M G  + T
Sbjct: 157 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGVMFGNPETT 209

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>Q8VS69:RECA_BORHE Protein recA - Borrelia hermsii|
          Length = 356

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +2

Query: 635 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 793
           GE+     G  A+L+ +  R+   ++ K   C +FIN L    G M G  + T
Sbjct: 170 GEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQLRMKIGVMFGNPETT 222

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>Q662N0:RECA_BORGA Protein recA - Borrelia garinii|
          Length = 362

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +2

Query: 611 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 790
           + P +   GE+     G  A+L+ +  R+   ++ K   C +FIN +    G M G  + 
Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQIRMRIGIMFGNPET 223

Query: 791 T 793
           T
Sbjct: 224 T 224

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>Q59180:RECA_BORBU Protein recA - Borrelia burgdorferi (Lyme disease spirochete)|
          Length = 365

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +2

Query: 611 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 790
           + P +   GE+     G  A+L+ +  R+   ++ K   C +FIN +    G M G  + 
Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQIRMRIGVMFGNPET 223

Query: 791 T 793
           T
Sbjct: 224 T 224

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>Q4KM73:KCY_RAT UMP-CMP kinase - Rattus norvegicus (Rat)|
          Length = 196

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 533 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 709
           PL++ + GG G GK  QC  +  K G     +SAGEL       P      +Y E  +  
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56

Query: 710 IKKGKM 727
           IK+GK+
Sbjct: 57  IKEGKI 62

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>Q9DBP5:KCY_MOUSE UMP-CMP kinase - Mus musculus (Mouse)|
          Length = 196

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 533 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 709
           PL++ + GG G GK  QC  +  K G     +SAGEL       P      +Y E  +  
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56

Query: 710 IKKGKM 727
           IK+GK+
Sbjct: 57  IKEGKI 62

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>P30085:KCY_HUMAN UMP-CMP kinase - Homo sapiens (Human)|
          Length = 196

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 533 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 709
           PL++ + GG G GK  QC  +  K G     +SAGEL       P      +Y E  +  
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56

Query: 710 IKKGKM 727
           IK+GK+
Sbjct: 57  IKEGKI 62

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>Q3IKH4:G6PI_PSEHT Glucose-6-phosphate isomerase - Pseudoalteromonas haloplanktis|
           (strain TAC 125)
          Length = 548

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 401 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 580
           Y SQ +  YD    M   Y+    M+    H++    T+P   +P+I G+ G  GQ   +
Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387

Query: 581 QC 586
           QC
Sbjct: 388 QC 389

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>P57462:FTSH_BUCAI Cell division protease ftsH - Buchnera aphidicola subsp.|
           Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic
           bacterium)
          Length = 611

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 5/152 (3%)
 Frame = +2

Query: 527 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 706
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  +  +  
Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHS-- 240

Query: 707 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 871
             +K   C +FI+++DA     GAG  GG   +    Q +N  L         V++ G  
Sbjct: 241 --RKSAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285

Query: 872 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 967
             + N  + ++   N    L   L+R GR ++
Sbjct: 286 --DGNEGIILIAATNRPDVLDPALLRPGRFDR 315

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>Q9QYP2:CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 - Rattus norvegicus|
            (Rat)
          Length = 2144

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +1

Query: 484  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 648
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1209

Query: 649  -WERWRASQAHQAAVP*G 699
             W R R      A  P G
Sbjct: 1210 WWPRTRFGLPAAAPCPKG 1227

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>Q9R0M0:CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 precursor - Mus|
            musculus (Mouse)
          Length = 2920

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +1

Query: 484  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 648
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1985

Query: 649  -WERWRASQAHQAAVP*G 699
             W R R      A  P G
Sbjct: 1986 WWPRTRFGLPAAAPCPKG 2003

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>Q9HCU4:CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 precursor - Homo|
            sapiens (Human)
          Length = 2923

 Score = 32.0 bits (71), Expect = 8.0
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +1

Query: 484  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 648
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1984

Query: 649  -WERWRASQAHQAAVP*G 699
             W R R      A  P G
Sbjct: 1985 WWPRTRFGLPAAAPCPKG 2002


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 297,208,937
Number of extensions: 6872349
Number of successful extensions: 21185
Number of sequences better than 10.0: 198
Number of HSP's gapped: 21134
Number of HSP's successfully gapped: 216
Length of query: 558
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 440
Effective length of database: 68,319,629
Effective search space: 30060636760
Effective search space used: 30060636760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result