ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf99k05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056821.1| Oryza sativa (japonica cultivar-group) Os03g0393700 (Os03g0393700) mRNA, complete cds Length = 2256 Score = 579 bits (292), Expect = e-161 Identities = 650/768 (84%), Gaps = 6/768 (0%) Strand = Plus / Plus Query: 140 gacggcacggagctctgggggttcgtcgaagtccgaccaaaggctcacctgttctggtgg 199 ||||||| ||||||||||| | |||| |||| || || ||||| ||||||||||||||| Sbjct: 149 gacggcagcgagctctggggatacgtccaagttcgcccgaaggcgcacctgttctggtgg 208 Query: 200 tactacaagagcccccagagggtgtcgacgccgtccaagccatggccgaccgtcctctgg 259 |||||||||||||| ||| ||| |||| ||||| ||||||||||||||| |||||||| Sbjct: 209 tactacaagagcccgcagcgggcgtcgtcgccggggaagccatggccgaccatcctctgg 268 Query: 260 ctacagggcggtcctggagcgtcgggggtgggcatcggcaacttcatggagatcggcccc 319 || |||||||| || ||||||||||| || || ||||||||||| ||||| |||| || Sbjct: 269 cttcagggcggcccgggagcgtcgggcgtcgggctcggcaacttcctggaggtcgggccg 328 Query: 320 ctcgacgtcaacctgaagcctcgaaactccacgtggctgcagaaggccgacctcatcttc 379 || ||||||||||||||||| || |||| |||||||||||||||||||||||||||||| Sbjct: 329 ctggacgtcaacctgaagccgcgcgactcgacgtggctgcagaaggccgacctcatcttc 388 Query: 380 gtggacaaccctgtgggggtcgggtacagttacgtcgaggacgacagcctactggtgacg 439 ||||||||||| ||||| ||||||||||| |||| || ||| ||| ||||||||| Sbjct: 389 gtggacaacccggtgggcgtcgggtacagctacgcggacgacccgagcgcgctggtgacg 448 Query: 440 agtgactggcaggcggccacggacgccaccacgctcctcaaggcgctggcc---aaggag 496 | ||||||||||||||||||||||||||| ||| |||| |||||| ||| |||||| Sbjct: 449 acggactggcaggcggccacggacgccaccgagctgctcagggcgctcgccgccaaggag 508 Query: 497 ctgcccaccctgcagcaggggagccccctctacctcgtcgccgagtcctacggcggaaag 556 | |||||||||||| | ||||| || | |||||||||||||||||||||||| ||| Sbjct: 509 atacccaccctgcaga---gcagcccgctgttcctcgtcgccgagtcctacggcggcaag 565 Query: 557 tacgcggccacactcggcgtctcggtcgcaagggccgtccgtgccggcgacctcaagatc 616 ||||| ||||| ||||||||||| |||| ||||| |||| ||||||||||||||| || Sbjct: 566 tacgccgccacgctcggcgtctccctcgcccgggccatccgcgccggcgacctcaagctc 625 Query: 617 aagctcgcaggcgtcgcgctcggcgatagctggatctcgccggaggatttcacgctcgcc 676 || |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 626 aacctcggcggcgtggcgctcggcgacagctggatctcgccggaggatttcacgctcgcg 685 Query: 677 tacgcgccggtgctcctggatgtttcgaggctggacgacaacgccggcgacgccgccaag 736 ||| ||||| |||| ||||| || |||||||||||||||||||||||||||| |||| Sbjct: 686 tacacgccgctgctgctggaggtgtcgaggctggacgacaacgccggcgacgaggccagc 745 Query: 737 aagaaggcggcgacggtgaaggagcagatcgcggccgggcggctggccgcctcgcagggg 796 |||| ||||||||||||||||||||||||| |||| |||| ||| || | ||||||| | Sbjct: 746 aagatggcggcgacggtgaaggagcagatcacggcggggcagcttgcggactcgcagcag 805 Query: 797 tcgtggtcggatcttttggatttcattcgctccaagagcgccagcgtcgacatgtacaat 856 |||||| || || ||| |||||| | ||||||||||||||||||||||||||| Sbjct: 806 tcgtggatcgacctgctgggtttcatcgacaaaaagagcgccagcgtcgacatgtacaat 865 Query: 857 ttcttgctcgacgccggcatggacccggtggcggcggacctgccggcg 904 |||||||| ||| ||||||||||||||||| |||| ||| | |||||| Sbjct: 866 ttcttgcttgactccggcatggacccggtgtcggcagacttaccggcg 913 Score = 165 bits (83), Expect = 6e-37 Identities = 197/235 (83%) Strand = Plus / Plus Query: 1116 tcgacgagctgctgtcttacggcgtggatgtcacggtttataacggccagctcgatgtga 1175 |||| ||||||||||||||||| | |||| ||||| || || || ||||| ||||| | Sbjct: 1388 tcgatgagctgctgtcttacggtatcaatgtgacggtctacaatggtcagcttgatgtaa 1447 Query: 1176 tttgctcgaccaagggcgcggaagcatgggtgcagaagctcaaatgggatgggctgaaga 1235 | |||||||| | || || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 1448 tatgctcgacgatcggtgcagaagcatgggtgaagaagctcaaatgggatgggctgaaga 1507 Query: 1236 acttcctgagccttccgcgggagcctctgtactgcggatcatccacggtcaccaaggcct 1295 ||||||||||||| || || ||||| || | || || || |||| || ||||||||| | Sbjct: 1508 acttcctgagcctaccaaggcagcctttgaagtgtggctcttccaagggcaccaaggcgt 1567 Query: 1296 ttgtcaggtcctacaagaacctgcatttctactggatccttggcgctggccactt 1350 | ||||| || |||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1568 tcgtcagatcatacaagaacctgcatttctactggatacttggggctggacactt 1622 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 989 ggcatcatgaacggggtcatcaaggagaagctcaagatcatccccaa 1035 |||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1013 ggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaa 1059 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 1355 cctgccgaccagccttgcattgcgctgagcatgatcggtggcataacccagtctccagcc 1414 ||||| || ||||| |||||||| |||||||||||| || |||||||||||||||||||| Sbjct: 2087 cctgctgatcagccctgcattgcactgagcatgatcagtagcataacccagtctccagcc 2146 Query: 1415 ag 1416 || Sbjct: 2147 ag 2148 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1067 gtctacaacgcgctggtcaacgacttcatgaagccaaggatcgacgaggt 1116 |||||||| |||||||||||||| |||||||||||||| ||| ||||||| Sbjct: 1240 gtctacaatgcgctggtcaacgatttcatgaagccaagaatcaacgaggt 1289
>dbj|AK101332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034H21, full insert sequence Length = 1555 Score = 571 bits (288), Expect = e-159 Identities = 649/768 (84%), Gaps = 6/768 (0%) Strand = Plus / Plus Query: 140 gacggcacggagctctgggggttcgtcgaagtccgaccaaaggctcacctgttctggtgg 199 ||||||| ||||||||||| | |||| |||| || || ||||| ||||||||||||||| Sbjct: 156 gacggcagcgagctctggggatacgtccaagttcgcccgaaggcgcacctgttctggtgg 215 Query: 200 tactacaagagcccccagagggtgtcgacgccgtccaagccatggccgaccgtcctctgg 259 |||||||||||||| ||| ||| |||| ||||| ||||||||||||||| |||||||| Sbjct: 216 tactacaagagcccgcagcgggcgtcgtcgccggggaagccatggccgaccatcctctgg 275 Query: 260 ctacagggcggtcctggagcgtcgggggtgggcatcggcaacttcatggagatcggcccc 319 || |||||||| || ||||||||||| || || ||||||||||| ||||| |||| || Sbjct: 276 cttcagggcggcccgggagcgtcgggcgtcgggctcggcaacttcctggaggtcgggccg 335 Query: 320 ctcgacgtcaacctgaagcctcgaaactccacgtggctgcagaaggccgacctcatcttc 379 || ||||||||||||||||| || |||| |||||||||||||||||||||||||||||| Sbjct: 336 ctggacgtcaacctgaagccgcgcgactcgacgtggctgcagaaggccgacctcatcttc 395 Query: 380 gtggacaaccctgtgggggtcgggtacagttacgtcgaggacgacagcctactggtgacg 439 ||||||||||| ||||| ||||||||||| |||| || ||| ||| ||||||||| Sbjct: 396 gtggacaacccggtgggcgtcgggtacagctacgcggacgacccgagcgcgctggtgacg 455 Query: 440 agtgactggcaggcggccacggacgccaccacgctcctcaaggcgctggcc---aaggag 496 | ||||||||||||||||||||||||||| ||| |||| |||||| ||| |||||| Sbjct: 456 acggactggcaggcggccacggacgccaccgagctgctcagggcgctcgccgccaaggag 515 Query: 497 ctgcccaccctgcagcaggggagccccctctacctcgtcgccgagtcctacggcggaaag 556 | |||||||||||| | ||||| || | |||||||||||||||||||||||| ||| Sbjct: 516 atacccaccctgcaga---gcagcccgctgttcctcgtcgccgagtcctacggcggcaag 572 Query: 557 tacgcggccacactcggcgtctcggtcgcaagggccgtccgtgccggcgacctcaagatc 616 ||||| ||||| ||||||||||| |||| ||||| |||| ||||||||||||||| || Sbjct: 573 tacgccgccacgctcggcgtctccctcgcccgggccatccgcgccggcgacctcaagctc 632 Query: 617 aagctcgcaggcgtcgcgctcggcgatagctggatctcgccggaggatttcacgctcgcc 676 || |||| ||||| ||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 633 aacctcggcggcgtggcgctcggcgacaactggatctcgccggaggatttcacgctcgcg 692 Query: 677 tacgcgccggtgctcctggatgtttcgaggctggacgacaacgccggcgacgccgccaag 736 ||| ||||| |||| ||||| || |||||||||||||||||||||||||||| |||| Sbjct: 693 tacacgccgctgctgctggaggtgtcgaggctggacgacaacgccggcgacgaggccagc 752 Query: 737 aagaaggcggcgacggtgaaggagcagatcgcggccgggcggctggccgcctcgcagggg 796 |||| ||||||||||||||||||||||||| |||| |||| ||| || | ||||||| | Sbjct: 753 aagatggcggcgacggtgaaggagcagatcacggcggggcagcttgcggactcgcagcag 812 Query: 797 tcgtggtcggatcttttggatttcattcgctccaagagcgccagcgtcgacatgtacaat 856 |||||| || || ||| |||||| | ||||||||||||||||||||||||||| Sbjct: 813 tcgtggatcgacctgctgggtttcatcgacaaaaagagcgccagcgtcgacatgtacaat 872 Query: 857 ttcttgctcgacgccggcatggacccggtggcggcggacctgccggcg 904 |||||||| ||| ||||||||||||||||| |||| ||| | |||||| Sbjct: 873 ttcttgcttgactccggcatggacccggtgtcggcagacttaccggcg 920 Score = 341 bits (172), Expect = 5e-90 Identities = 364/428 (85%) Strand = Plus / Plus Query: 989 ggcatcatgaacggggtcatcaaggagaagctcaagatcatccccaaggaacacgagtgg 1048 |||||||||||||| ||||||||||| |||||||||||||||||||| | | | ||||| Sbjct: 1020 ggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaacaacctcaagtgg 1079 Query: 1049 tacgagctgtcagaccccgtctacaacgcgctggtcaacgacttcatgaagccaaggatc 1108 | || ||||| || || |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 1080 caggaactgtcggatccggtctacaatgcgctggtcaacgatttcatgaagccaagaatc 1139 Query: 1109 gacgaggtcgacgagctgctgtcttacggcgtggatgtcacggtttataacggccagctc 1168 ||||| |||| ||||||||||||||||| | |||| ||||| || || || ||||| Sbjct: 1140 aacgagatcgatgagctgctgtcttacggtatcaatgtgacggtctacaatggtcagctt 1199 Query: 1169 gatgtgatttgctcgaccaagggcgcggaagcatgggtgcagaagctcaaatgggatggg 1228 ||||| || |||||||| | || || |||||||||||| |||||||||||||||||||| Sbjct: 1200 gatgtaatatgctcgacgatcggtgcagaagcatgggtgaagaagctcaaatgggatggg 1259 Query: 1229 ctgaagaacttcctgagccttccgcgggagcctctgtactgcggatcatccacggtcacc 1288 |||||||||||||||||||| || || ||||| || | || || || |||| || |||| Sbjct: 1260 ctgaagaacttcctgagcctaccaaggcagcctttgaagtgtggctcttccaagggcacc 1319 Query: 1289 aaggcctttgtcaggtcctacaagaacctgcatttctactggatccttggcgctggccac 1348 ||||| || ||||| || |||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 1320 aaggcgttcgtcagatcatacaagaacctgcatttctactggatacttggggctggacac 1379 Query: 1349 ttcgtgcctgccgaccagccttgcattgcgctgagcatgatcggtggcataacccagtct 1408 || || ||||| || ||||| |||||||| |||||||||||| || |||||||||||||| Sbjct: 1380 tttgtacctgctgatcagccctgcattgcactgagcatgatcagtagcataacccagtct 1439 Query: 1409 ccagccag 1416 |||||||| Sbjct: 1440 ccagccag 1447
>dbj|AK119753.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-E02, full insert sequence Length = 2362 Score = 361 bits (182), Expect = 5e-96 Identities = 441/526 (83%), Gaps = 6/526 (1%) Strand = Plus / Plus Query: 382 ggacaaccctgtgggggtcgggtacagttacgtcgaggacgacagcctactggtgacgag 441 ||||||||| ||||| ||||||||||| |||| || ||| ||| |||||||||| Sbjct: 495 ggacaacccggtgggcgtcgggtacagctacgcggacgacccgagcgcgctggtgacgac 554 Query: 442 tgactggcaggcggccacggacgccaccacgctcctcaaggcgctggcc---aaggagct 498 ||||||||||||||||||||||||||| ||| |||| |||||| ||| |||||| | Sbjct: 555 ggactggcaggcggccacggacgccaccgagctgctcagggcgctcgccgccaaggagat 614 Query: 499 gcccaccctgcagcaggggagccccctctacctcgtcgccgagtcctacggcggaaagta 558 |||||||||||| | ||||| || | |||||||||||||||||||||||| ||||| Sbjct: 615 acccaccctgcaga---gcagcccgctgttcctcgtcgccgagtcctacggcggcaagta 671 Query: 559 cgcggccacactcggcgtctcggtcgcaagggccgtccgtgccggcgacctcaagatcaa 618 ||| ||||| ||||||||||| |||| ||||| |||| ||||||||||||||| |||| Sbjct: 672 cgccgccacgctcggcgtctccctcgcccgggccatccgcgccggcgacctcaagctcaa 731 Query: 619 gctcgcaggcgtcgcgctcggcgatagctggatctcgccggaggatttcacgctcgccta 678 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 732 cctcggcggcgtggcgctcggcgacagctggatctcgccggaggatttcacgctcgcgta 791 Query: 679 cgcgccggtgctcctggatgtttcgaggctggacgacaacgccggcgacgccgccaagaa 738 | ||||| |||| ||||| || |||||||||||||||||||||||||||| |||| || Sbjct: 792 cacgccgctgctgctggaggtgtcgaggctggacgacaacgccggcgacgaggccagcaa 851 Query: 739 gaaggcggcgacggtgaaggagcagatcgcggccgggcggctggccgcctcgcaggggtc 798 || ||||||||||||||||||||||||| |||| |||| ||| || | ||||||| ||| Sbjct: 852 gatggcggcgacggtgaaggagcagatcacggcggggcagcttgcggactcgcagcagtc 911 Query: 799 gtggtcggatcttttggatttcattcgctccaagagcgccagcgtcgacatgtacaattt 858 |||| || || ||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 912 gtggatcgacctgctgggtttcatcgacaaaaagagcgccagcgtcgacatgtacaattt 971 Query: 859 cttgctcgacgccggcatggacccggtggcggcggacctgccggcg 904 |||||| ||| ||||||||||||||||| |||| ||| | |||||| Sbjct: 972 cttgcttgactccggcatggacccggtgtcggcagacttaccggcg 1017 Score = 222 bits (112), Expect = 3e-54 Identities = 211/244 (86%) Strand = Plus / Plus Query: 140 gacggcacggagctctgggggttcgtcgaagtccgaccaaaggctcacctgttctggtgg 199 ||||||| ||||||||||| | |||| |||| || || ||||| ||||||||||||||| Sbjct: 149 gacggcagcgagctctggggatacgtccaagttcgcccgaaggcgcacctgttctggtgg 208 Query: 200 tactacaagagcccccagagggtgtcgacgccgtccaagccatggccgaccgtcctctgg 259 |||||||||||||| ||| ||| |||| ||||| ||||||||||||||| |||||||| Sbjct: 209 tactacaagagcccgcagcgggcgtcgtcgccggggaagccatggccgaccatcctctgg 268 Query: 260 ctacagggcggtcctggagcgtcgggggtgggcatcggcaacttcatggagatcggcccc 319 || |||||||| || ||||||||||| || || ||||||||||| ||||| |||| || Sbjct: 269 cttcagggcggcccgggagcgtcgggcgtcgggctcggcaacttcctggaggtcgggccg 328 Query: 320 ctcgacgtcaacctgaagcctcgaaactccacgtggctgcagaaggccgacctcatcttc 379 || ||||||||||||||||| || |||| |||||||||||||||||||||||||||||| Sbjct: 329 ctggacgtcaacctgaagccgcgcgactcgacgtggctgcagaaggccgacctcatcttc 388 Query: 380 gtgg 383 |||| Sbjct: 389 gtgg 392 Score = 165 bits (83), Expect = 6e-37 Identities = 197/235 (83%) Strand = Plus / Plus Query: 1116 tcgacgagctgctgtcttacggcgtggatgtcacggtttataacggccagctcgatgtga 1175 |||| ||||||||||||||||| | |||| ||||| || || || ||||| ||||| | Sbjct: 1492 tcgatgagctgctgtcttacggtatcaatgtgacggtctacaatggtcagcttgatgtaa 1551 Query: 1176 tttgctcgaccaagggcgcggaagcatgggtgcagaagctcaaatgggatgggctgaaga 1235 | |||||||| | || || |||||||||||| ||||||||||||||||||||||||||| Sbjct: 1552 tatgctcgacgatcggtgcagaagcatgggtgaagaagctcaaatgggatgggctgaaga 1611 Query: 1236 acttcctgagccttccgcgggagcctctgtactgcggatcatccacggtcaccaaggcct 1295 ||||||||||||| || || ||||| || | || || || |||| || ||||||||| | Sbjct: 1612 acttcctgagcctaccaaggcagcctttgaagtgtggctcttccaagggcaccaaggcgt 1671 Query: 1296 ttgtcaggtcctacaagaacctgcatttctactggatccttggcgctggccactt 1350 | ||||| || |||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1672 tcgtcagatcatacaagaacctgcatttctactggatacttggggctggacactt 1726 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 989 ggcatcatgaacggggtcatcaaggagaagctcaagatcatccccaa 1035 |||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1117 ggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaa 1163 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 1355 cctgccgaccagccttgcattgcgctgagcatgatcggtggcataacccagtctccagcc 1414 ||||| || ||||| |||||||| |||||||||||| || |||||||||||||||||||| Sbjct: 2193 cctgctgatcagccctgcattgcactgagcatgatcagtagcataacccagtctccagcc 2252 Query: 1415 ag 1416 || Sbjct: 2253 ag 2254 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1067 gtctacaacgcgctggtcaacgacttcatgaagccaaggatcgacgaggt 1116 |||||||| |||||||||||||| |||||||||||||| ||| ||||||| Sbjct: 1344 gtctacaatgcgctggtcaacgatttcatgaagccaagaatcaacgaggt 1393
>dbj|AK058801.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-A09, full insert sequence Length = 527 Score = 216 bits (109), Expect = 2e-52 Identities = 193/221 (87%) Strand = Plus / Plus Query: 1196 gaagcatgggtgcagaagctcaaatgggatgggctgaagaacttcctgagccttccgcgg 1255 |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || Sbjct: 199 gaagcatgggtgaagaagctcaaatgggatgggctgaagaacttcctgagcctaccaagg 258 Query: 1256 gagcctctgtactgcggatcatccacggtcaccaaggcctttgtcaggtcctacaagaac 1315 ||||| || | || || || |||| || ||||||||| || ||||| || ||||||||| Sbjct: 259 cagcctttgaagtgtggctcttccaagggcaccaaggcgttcgtcagatcatacaagaac 318 Query: 1316 ctgcatttctactggatccttggcgctggccacttcgtgcctgccgaccagccttgcatt 1375 ||||||||||||||||| ||||| ||||| ||||| || ||||| || ||||| |||||| Sbjct: 319 ctgcatttctactggatacttggggctggacactttgtacctgctgatcagccctgcatt 378 Query: 1376 gcgctgagcatgatcggtggcataacccagtctccagccag 1416 || |||||||||||| || |||||||||||||||||||||| Sbjct: 379 gcactgagcatgatcagtagcataacccagtctccagccag 419
>ref|NM_001056820.1| Oryza sativa (japonica cultivar-group) Os03g0392600 (Os03g0392600) mRNA, complete cds Length = 1597 Score = 210 bits (106), Expect = 1e-50 Identities = 243/288 (84%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 140 gacggcacggagctctgggggttcgtcgaagtccgaccaaaggctcacctgttctggtgg 199 |||||| | |||| |||||| | |||| ||||||| |||||||| ||||||||||||||| Sbjct: 143 gacggctccgagcgctggggatacgtccaagtccggccaaaggcgcacctgttctggtgg 202 Query: 200 tactacaagagcccccagagggtgtcgacgccgtcc---aagccatggccgaccgtcctc 256 ||||||| |||||| ||| |||||||| ||||| ||||||||||||||| ||||| Sbjct: 203 tactacaggagcccgcagcgggtgtcgtcgccgggggggaagccatggccgaccatcctc 262 Query: 257 tggctacagggcggtcctggagcgtcgggggtgggcatcggcaacttcatggagatcggc 316 ||||| || ||||| || ||||||||||| || || ||||||||||| ||||| ||||| Sbjct: 263 tggctgcaaggcggcccgggagcgtcgggcgtcgggctcggcaacttcctggaggtcggc 322 Query: 317 cccctcgacgtcaacctgaagcctcgaaactccacgtggctgcagaaggccgacctcatc 376 || || |||| | |||||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 323 ccgctggacggcgacctgaagccgcgcggctcgacgtggctgcagaaggccgacctcatc 382 Query: 377 ttcgtggacaaccctgtgggggtcgggtacagttacgtcgaggacgac 424 |||||||||||||| |||||| || ||||| ||||| ||||||||| Sbjct: 383 ttcgtggacaacccggtggggacaggatacagctacgtggaggacgac 430 Score = 159 bits (80), Expect = 4e-35 Identities = 128/144 (88%) Strand = Plus / Plus Query: 529 cctcgtcgccgagtcctacggcggaaagtacgcggccacactcggcgtctcggtcgcaag 588 |||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||| | Sbjct: 535 cctcgtcgccgagtcctacggcggcaagtacgccgccacgctcggcgtctccctcgcccg 594 Query: 589 ggccgtccgtgccggcgacctcaagatcaagctcgcaggcgtcgcgctcggcgatagctg 648 |||| |||| ||||||| ||||||| ||| |||||| ||||| ||||||||||| ||||| Sbjct: 595 ggccatccgcgccggcggcctcaagctcacgctcgccggcgtggcgctcggcgacagctg 654 Query: 649 gatctcgccggaggatttcacgct 672 ||||||||||||||||||| |||| Sbjct: 655 gatctcgccggaggatttcgcgct 678 Score = 125 bits (63), Expect = 6e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 1067 gtctacaacgcgctggtcaacgacttcatgaagccaaggatcgacgaggtcgacgagctg 1126 |||||||| |||||| |||| |||||||||||||| || || | |||||||| ||||| Sbjct: 1058 gtctacaatgcgctgatcaatgacttcatgaagccgagaattcaggaggtcgatgagctc 1117 Query: 1127 ctgtcttacggcgtggatgtcacggtttataacggccagctcgatgtgatttgctcgacc 1186 ||||| || ||||| |||| ||||| || || || |||||||||||||| ||||| || Sbjct: 1118 ctgtcgtatggcgtcaatgtgacggtgtacaatggacagctcgatgtgatctgctcaacg 1177 Query: 1187 aagggcgcggaagcatgggtgcagaagctcaaatgggatgggctgaagaacttcctgag 1245 || || ||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1178 gttggtgcagaagcatgggttcagaagctcaaatgggatgggctgaagaacttcttgag 1236 Score = 93.7 bits (47), Expect = 2e-15 Identities = 83/95 (87%) Strand = Plus / Plus Query: 1283 gtcaccaaggcctttgtcaggtcctacaagaacctgcatttctactggatccttggcgct 1342 ||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 1274 gtcacaaagggctttgtcagatcctacaaaaacctgcatttctactggatccttggagct 1333 Query: 1343 ggccacttcgtgcctgccgaccagccttgcattgc 1377 ||||| || || |||| || ||||| |||||||| Sbjct: 1334 ggccattttgtacctgttgatcagccctgcattgc 1368 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 993 tcatgaacggggtcatcaaggagaagctcaagatcatccc 1032 ||||||| || | ||||||||||||||||||||||||||| Sbjct: 984 tcatgaatggagccatcaaggagaagctcaagatcatccc 1023 Score = 42.1 bits (21), Expect = 6.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 849 tgtacaatttcttgctcgacgccggcatggacccggt 885 ||||||| ||| |||||||| |||| ||||||||||| Sbjct: 855 tgtacaacttcctgctcgacaccgggatggacccggt 891
>dbj|AK103605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133H04, full insert sequence Length = 1600 Score = 210 bits (106), Expect = 1e-50 Identities = 243/288 (84%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 140 gacggcacggagctctgggggttcgtcgaagtccgaccaaaggctcacctgttctggtgg 199 |||||| | |||| |||||| | |||| ||||||| |||||||| ||||||||||||||| Sbjct: 145 gacggctccgagcgctggggatacgtccaagtccggccaaaggcgcacctgttctggtgg 204 Query: 200 tactacaagagcccccagagggtgtcgacgccgtcc---aagccatggccgaccgtcctc 256 ||||||| |||||| ||| |||||||| ||||| ||||||||||||||| ||||| Sbjct: 205 tactacaggagcccgcagcgggtgtcgtcgccgggggggaagccatggccgaccatcctc 264 Query: 257 tggctacagggcggtcctggagcgtcgggggtgggcatcggcaacttcatggagatcggc 316 ||||| || ||||| || ||||||||||| || || ||||||||||| ||||| ||||| Sbjct: 265 tggctgcaaggcggcccgggagcgtcgggcgtcgggctcggcaacttcctggaggtcggc 324 Query: 317 cccctcgacgtcaacctgaagcctcgaaactccacgtggctgcagaaggccgacctcatc 376 || || |||| | |||||||||| || ||| ||||||||||||||||||||||||||| Sbjct: 325 ccgctggacggcgacctgaagccgcgcggctcgacgtggctgcagaaggccgacctcatc 384 Query: 377 ttcgtggacaaccctgtgggggtcgggtacagttacgtcgaggacgac 424 |||||||||||||| |||||| || ||||| ||||| ||||||||| Sbjct: 385 ttcgtggacaacccggtggggacaggatacagctacgtggaggacgac 432 Score = 159 bits (80), Expect = 4e-35 Identities = 128/144 (88%) Strand = Plus / Plus Query: 529 cctcgtcgccgagtcctacggcggaaagtacgcggccacactcggcgtctcggtcgcaag 588 |||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||| | Sbjct: 537 cctcgtcgccgagtcctacggcggcaagtacgccgccacgctcggcgtctccctcgcccg 596 Query: 589 ggccgtccgtgccggcgacctcaagatcaagctcgcaggcgtcgcgctcggcgatagctg 648 |||| |||| ||||||| ||||||| ||| |||||| ||||| ||||||||||| ||||| Sbjct: 597 ggccatccgcgccggcggcctcaagctcacgctcgccggcgtggcgctcggcgacagctg 656 Query: 649 gatctcgccggaggatttcacgct 672 ||||||||||||||||||| |||| Sbjct: 657 gatctcgccggaggatttcgcgct 680 Score = 125 bits (63), Expect = 6e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 1067 gtctacaacgcgctggtcaacgacttcatgaagccaaggatcgacgaggtcgacgagctg 1126 |||||||| |||||| |||| |||||||||||||| || || | |||||||| ||||| Sbjct: 1060 gtctacaatgcgctgatcaatgacttcatgaagccgagaattcaggaggtcgatgagctc 1119 Query: 1127 ctgtcttacggcgtggatgtcacggtttataacggccagctcgatgtgatttgctcgacc 1186 ||||| || ||||| |||| ||||| || || || |||||||||||||| ||||| || Sbjct: 1120 ctgtcgtatggcgtcaatgtgacggtgtacaatggacagctcgatgtgatctgctcaacg 1179 Query: 1187 aagggcgcggaagcatgggtgcagaagctcaaatgggatgggctgaagaacttcctgag 1245 || || ||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1180 gttggtgcagaagcatgggttcagaagctcaaatgggatgggctgaagaacttcttgag 1238 Score = 93.7 bits (47), Expect = 2e-15 Identities = 83/95 (87%) Strand = Plus / Plus Query: 1283 gtcaccaaggcctttgtcaggtcctacaagaacctgcatttctactggatccttggcgct 1342 ||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 1276 gtcacaaagggctttgtcagatcctacaaaaacctgcatttctactggatccttggagct 1335 Query: 1343 ggccacttcgtgcctgccgaccagccttgcattgc 1377 ||||| || || |||| || ||||| |||||||| Sbjct: 1336 ggccattttgtacctgttgatcagccctgcattgc 1370 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 993 tcatgaacggggtcatcaaggagaagctcaagatcatccc 1032 ||||||| || | ||||||||||||||||||||||||||| Sbjct: 986 tcatgaatggagccatcaaggagaagctcaagatcatccc 1025 Score = 42.1 bits (21), Expect = 6.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 849 tgtacaatttcttgctcgacgccggcatggacccggt 885 ||||||| ||| |||||||| |||| ||||||||||| Sbjct: 857 tgtacaacttcctgctcgacaccgggatggacccggt 893
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 198 bits (100), Expect = 5e-47 Identities = 245/292 (83%), Gaps = 6/292 (2%) Strand = Plus / Minus Query: 382 ggacaaccctgtgggggtcgggtacagttacgtcgaggacgacagcctactggtgacgag 441 ||||||||| ||||| ||||||||||| |||| || ||| ||| |||||||||| Sbjct: 15661149 ggacaacccggtgggcgtcgggtacagctacgcggacgacccgagcgcgctggtgacgac 15661090 Query: 442 tgactggcaggcggccacggacgccaccacgctcctcaaggcgctggcc---aaggagct 498 ||||||||||||||||||||||||||| ||| |||| |||||| ||| |||||| | Sbjct: 15661089 ggactggcaggcggccacggacgccaccgagctgctcagggcgctcgccgccaaggagat 15661030 Query: 499 gcccaccctgcagcaggggagccccctctacctcgtcgccgagtcctacggcggaaagta 558 |||||||||||| | ||||| || | |||||||||||||||||||||||| ||||| Sbjct: 15661029 acccaccctgcaga---gcagcccgctgttcctcgtcgccgagtcctacggcggcaagta 15660973 Query: 559 cgcggccacactcggcgtctcggtcgcaagggccgtccgtgccggcgacctcaagatcaa 618 ||| ||||| ||||||||||| |||| ||||| |||| ||||||||||||||| |||| Sbjct: 15660972 cgccgccacgctcggcgtctccctcgcccgggccatccgcgccggcgacctcaagctcaa 15660913 Query: 619 gctcgcaggcgtcgcgctcggcgatagctggatctcgccggaggatttcacg 670 |||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 15660912 cctcggcggcgtggcgctcggcgacagctggatctcgccggaggatttcacg 15660861 Score = 157 bits (79), Expect = 2e-34 Identities = 124/139 (89%) Strand = Plus / Minus Query: 529 cctcgtcgccgagtcctacggcggaaagtacgcggccacactcggcgtctcggtcgcaag 588 |||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||| | Sbjct: 15599201 cctcgtcgccgagtcctacggcggcaagtacgccgccacgctcggcgtctccctcgcccg 15599142 Query: 589 ggccgtccgtgccggcgacctcaagatcaagctcgcaggcgtcgcgctcggcgatagctg 648 |||| |||| ||||||| ||||||| ||| |||||| ||||| ||||||||||| ||||| Sbjct: 15599141 ggccatccgcgccggcggcctcaagctcacgctcgccggcgtggcgctcggcgacagctg 15599082 Query: 649 gatctcgccggaggatttc 667 ||||||||||||||||||| Sbjct: 15599081 gatctcgccggaggatttc 15599063 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Minus Query: 275 ggagcgtcgggggtgggcatcggcaacttcatggagatcggccccctcgacgtcaacctg 334 ||||||||||| || || ||||||||||| ||||| |||| || || |||||||||||| Sbjct: 15661360 ggagcgtcgggcgtcgggctcggcaacttcctggaggtcgggccgctggacgtcaacctg 15661301 Query: 335 aagcctcgaaactccacgtggctgcagaaggccgacctcatcttcgtgg 383 ||||| || |||| |||||||||||||||||||||||||||||||||| Sbjct: 15661300 aagccgcgcgactcgacgtggctgcagaaggccgacctcatcttcgtgg 15661252 Score = 111 bits (56), Expect = 8e-21 Identities = 113/132 (85%) Strand = Plus / Minus Query: 1219 atgggatgggctgaagaacttcctgagccttccgcgggagcctctgtactgcggatcatc 1278 |||||||||||||||||||||||||||||| || || ||||| || | || || || || Sbjct: 15657591 atgggatgggctgaagaacttcctgagcctaccaaggcagcctttgaagtgtggctcttc 15657532 Query: 1279 cacggtcaccaaggcctttgtcaggtcctacaagaacctgcatttctactggatccttgg 1338 || || ||||||||| || ||||| || |||||||||||||||||||||||||| ||||| Sbjct: 15657531 caagggcaccaaggcgttcgtcagatcatacaagaacctgcatttctactggatacttgg 15657472 Query: 1339 cgctggccactt 1350 ||||| ||||| Sbjct: 15657471 ggctggacactt 15657460 Score = 101 bits (51), Expect = 8e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 180 aggctcacctgttctggtggtactacaagagcccccagagggtgtcgacgccgtccaagc 239 |||| ||||||||||||||||||||||||||||| ||| ||| |||| ||||| |||| Sbjct: 15661544 aggcgcacctgttctggtggtactacaagagcccgcagcgggcgtcgtcgccggggaagc 15661485 Query: 240 catggccgaccgtcctctggctacagggcgg 270 ||||||||||| |||||||||| |||||||| Sbjct: 15661484 catggccgaccatcctctggcttcagggcgg 15661454 Score = 97.6 bits (49), Expect = 1e-16 Identities = 94/109 (86%) Strand = Plus / Minus Query: 275 ggagcgtcgggggtgggcatcggcaacttcatggagatcggccccctcgacgtcaacctg 334 ||||||||||| || || ||||||||||| ||||| ||||||| || |||| | ||||| Sbjct: 15599554 ggagcgtcgggcgtcgggctcggcaacttcctggaggtcggcccgctggacggcgacctg 15599495 Query: 335 aagcctcgaaactccacgtggctgcagaaggccgacctcatcttcgtgg 383 ||||| || ||| |||||||||||||||||||||||||||||||||| Sbjct: 15599494 aagccgcgcggctcgacgtggctgcagaaggccgacctcatcttcgtgg 15599446 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 1283 gtcaccaaggcctttgtcaggtcctacaagaacctgcatttctactggatccttggcgct 1342 ||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 15596703 gtcacaaagggctttgtcagatcctacaaaaacctgcatttctactggatccttggagct 15596644 Query: 1343 ggcca 1347 ||||| Sbjct: 15596643 ggcca 15596639 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 989 ggcatcatgaacggggtcatcaaggagaagctcaagatcatccccaa 1035 |||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 15624701 ggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaa 15624655 Score = 77.8 bits (39), Expect = 1e-10 Identities = 78/91 (85%) Strand = Plus / Minus Query: 180 aggctcacctgttctggtggtactacaagagcccccagagggtgtcgacgccgtccaagc 239 |||| |||||||||||||||||||||| |||||| || | | |||| ||||| |||| Sbjct: 15634416 aggcgcacctgttctggtggtactacaggagcccgcatcgtgcgtcgtcgccggggaagc 15634357 Query: 240 catggccgaccgtcctctggctacagggcgg 270 ||||||||||| |||||||||| |||||||| Sbjct: 15634356 catggccgaccatcctctggcttcagggcgg 15634326 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 989 ggcatcatgaacggggtcatcaaggagaagctcaagatcatccccaa 1035 |||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 15659064 ggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaa 15659018 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 1355 cctgccgaccagccttgcattgcgctgagcatgatcggtggcataacccagtctccagcc 1414 ||||| || ||||| |||||||| |||||||||||| || |||||||||||||||||||| Sbjct: 15656995 cctgctgatcagccctgcattgcactgagcatgatcagtagcataacccagtctccagcc 15656936 Query: 1415 ag 1416 || Sbjct: 15656935 ag 15656934 Score = 71.9 bits (36), Expect = 7e-09 Identities = 80/94 (85%), Gaps = 3/94 (3%) Strand = Plus / Minus Query: 180 aggctcacctgttctggtggtactacaagagcccccagagggtgtcgacgcc---gtcca 236 |||| |||||||||||||||||||||| |||||| ||| |||||||| |||| | | Sbjct: 15599739 aggcgcacctgttctggtggtactacaggagcccgcagcgggtgtcgtcgccggggggga 15599680 Query: 237 agccatggccgaccgtcctctggctacagggcgg 270 |||||||||||||| |||||||||| || ||||| Sbjct: 15599679 agccatggccgaccatcctctggctgcaaggcgg 15599646 Score = 71.9 bits (36), Expect = 7e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 845 gacatgtacaatttcttgctcgacgccggcatggacccggtggcggcggacctgccggcg 904 |||||||||||||||||||| ||| ||||||||||||||||| |||| ||| | |||||| Sbjct: 15659223 gacatgtacaatttcttgcttgactccggcatggacccggtgtcggcagacttaccggcg 15659164 Score = 69.9 bits (35), Expect = 3e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 670 gctcgcctacgcgccggtgctcctggatgtttcgaggctggacgacaacgccggcgacg 728 |||||| ||| ||||| |||| ||||| || |||||||||||||||||||||||||||| Sbjct: 15660754 gctcgcgtacacgccgctgctgctggaggtgtcgaggctggacgacaacgccggcgacg 15660696 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1067 gtctacaacgcgctggtcaacgacttcatgaagccaaggatcgacgaggt 1116 |||||||| |||||||||||||| |||||||||||||| ||| ||||||| Sbjct: 15658837 gtctacaatgcgctggtcaacgatttcatgaagccaagaatcaacgaggt 15658788 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 992 atcatgaacggggtcatcaaggagaagctcaagatcatccccaagga 1038 ||||||||||| ||||||||| |||||||||||| ||||||||||| Sbjct: 15613868 atcatgaacggcgtcatcaagcggaagctcaagataatccccaagga 15613822 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Minus Query: 742 ggcggcgacggtgaaggagcagatcgcggccgggcggctggccgcctcgcaggggtcgtg 801 ||||||||||||||||||||||||| |||| |||| ||| || | ||||||| |||||| Sbjct: 15660567 ggcggcgacggtgaaggagcagatcacggcggggcagcttgcggactcgcagcagtcgtg 15660508 Query: 802 g 802 | Sbjct: 15660507 g 15660507 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 993 tcatgaacggggtcatcaaggagaagctcaagatcatccc 1032 ||||||| || | ||||||||||||||||||||||||||| Sbjct: 15598453 tcatgaatggagccatcaaggagaagctcaagatcatccc 15598414 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1219 atgggatgggctgaagaacttcctgag 1245 |||||||||||||||||||||| |||| Sbjct: 15596767 atgggatgggctgaagaacttcttgag 15596741 Score = 46.1 bits (23), Expect = 0.41 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1067 gtctacaacgcgctggtcaacgacttcatgaagcc 1101 |||||||| |||||| |||| |||||||||||||| Sbjct: 15598046 gtctacaatgcgctgatcaatgacttcatgaagcc 15598012 Score = 42.1 bits (21), Expect = 6.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 849 tgtacaatttcttgctcgacgccggcatggacccggt 885 ||||||| ||| |||||||| |||| ||||||||||| Sbjct: 15598582 tgtacaacttcctgctcgacaccgggatggacccggt 15598546
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 198 bits (100), Expect = 5e-47 Identities = 245/292 (83%), Gaps = 6/292 (2%) Strand = Plus / Minus Query: 382 ggacaaccctgtgggggtcgggtacagttacgtcgaggacgacagcctactggtgacgag 441 ||||||||| ||||| ||||||||||| |||| || ||| ||| |||||||||| Sbjct: 76569 ggacaacccggtgggcgtcgggtacagctacgcggacgacccgagcgcgctggtgacgac 76510 Query: 442 tgactggcaggcggccacggacgccaccacgctcctcaaggcgctggcc---aaggagct 498 ||||||||||||||||||||||||||| ||| |||| |||||| ||| |||||| | Sbjct: 76509 ggactggcaggcggccacggacgccaccgagctgctcagggcgctcgccgccaaggagat 76450 Query: 499 gcccaccctgcagcaggggagccccctctacctcgtcgccgagtcctacggcggaaagta 558 |||||||||||| | ||||| || | |||||||||||||||||||||||| ||||| Sbjct: 76449 acccaccctgcaga---gcagcccgctgttcctcgtcgccgagtcctacggcggcaagta 76393 Query: 559 cgcggccacactcggcgtctcggtcgcaagggccgtccgtgccggcgacctcaagatcaa 618 ||| ||||| ||||||||||| |||| ||||| |||| ||||||||||||||| |||| Sbjct: 76392 cgccgccacgctcggcgtctccctcgcccgggccatccgcgccggcgacctcaagctcaa 76333 Query: 619 gctcgcaggcgtcgcgctcggcgatagctggatctcgccggaggatttcacg 670 |||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 76332 cctcggcggcgtggcgctcggcgacagctggatctcgccggaggatttcacg 76281 Score = 157 bits (79), Expect = 2e-34 Identities = 124/139 (89%) Strand = Plus / Minus Query: 529 cctcgtcgccgagtcctacggcggaaagtacgcggccacactcggcgtctcggtcgcaag 588 |||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||| | Sbjct: 14621 cctcgtcgccgagtcctacggcggcaagtacgccgccacgctcggcgtctccctcgcccg 14562 Query: 589 ggccgtccgtgccggcgacctcaagatcaagctcgcaggcgtcgcgctcggcgatagctg 648 |||| |||| ||||||| ||||||| ||| |||||| ||||| ||||||||||| ||||| Sbjct: 14561 ggccatccgcgccggcggcctcaagctcacgctcgccggcgtggcgctcggcgacagctg 14502 Query: 649 gatctcgccggaggatttc 667 ||||||||||||||||||| Sbjct: 14501 gatctcgccggaggatttc 14483 Score = 113 bits (57), Expect = 2e-21 Identities = 96/109 (88%) Strand = Plus / Minus Query: 275 ggagcgtcgggggtgggcatcggcaacttcatggagatcggccccctcgacgtcaacctg 334 ||||||||||| || || ||||||||||| ||||| |||| || || |||||||||||| Sbjct: 76780 ggagcgtcgggcgtcgggctcggcaacttcctggaggtcgggccgctggacgtcaacctg 76721 Query: 335 aagcctcgaaactccacgtggctgcagaaggccgacctcatcttcgtgg 383 ||||| || |||| |||||||||||||||||||||||||||||||||| Sbjct: 76720 aagccgcgcgactcgacgtggctgcagaaggccgacctcatcttcgtgg 76672 Score = 111 bits (56), Expect = 8e-21 Identities = 113/132 (85%) Strand = Plus / Minus Query: 1219 atgggatgggctgaagaacttcctgagccttccgcgggagcctctgtactgcggatcatc 1278 |||||||||||||||||||||||||||||| || || ||||| || | || || || || Sbjct: 73011 atgggatgggctgaagaacttcctgagcctaccaaggcagcctttgaagtgtggctcttc 72952 Query: 1279 cacggtcaccaaggcctttgtcaggtcctacaagaacctgcatttctactggatccttgg 1338 || || ||||||||| || ||||| || |||||||||||||||||||||||||| ||||| Sbjct: 72951 caagggcaccaaggcgttcgtcagatcatacaagaacctgcatttctactggatacttgg 72892 Query: 1339 cgctggccactt 1350 ||||| ||||| Sbjct: 72891 ggctggacactt 72880 Score = 101 bits (51), Expect = 8e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 180 aggctcacctgttctggtggtactacaagagcccccagagggtgtcgacgccgtccaagc 239 |||| ||||||||||||||||||||||||||||| ||| ||| |||| ||||| |||| Sbjct: 76964 aggcgcacctgttctggtggtactacaagagcccgcagcgggcgtcgtcgccggggaagc 76905 Query: 240 catggccgaccgtcctctggctacagggcgg 270 ||||||||||| |||||||||| |||||||| Sbjct: 76904 catggccgaccatcctctggcttcagggcgg 76874 Score = 97.6 bits (49), Expect = 1e-16 Identities = 94/109 (86%) Strand = Plus / Minus Query: 275 ggagcgtcgggggtgggcatcggcaacttcatggagatcggccccctcgacgtcaacctg 334 ||||||||||| || || ||||||||||| ||||| ||||||| || |||| | ||||| Sbjct: 14974 ggagcgtcgggcgtcgggctcggcaacttcctggaggtcggcccgctggacggcgacctg 14915 Query: 335 aagcctcgaaactccacgtggctgcagaaggccgacctcatcttcgtgg 383 ||||| || ||| |||||||||||||||||||||||||||||||||| Sbjct: 14914 aagccgcgcggctcgacgtggctgcagaaggccgacctcatcttcgtgg 14866 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 1283 gtcaccaaggcctttgtcaggtcctacaagaacctgcatttctactggatccttggcgct 1342 ||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 12123 gtcacaaagggctttgtcagatcctacaaaaacctgcatttctactggatccttggagct 12064 Query: 1343 ggcca 1347 ||||| Sbjct: 12063 ggcca 12059 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 989 ggcatcatgaacggggtcatcaaggagaagctcaagatcatccccaa 1035 |||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 40121 ggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaa 40075 Score = 77.8 bits (39), Expect = 1e-10 Identities = 78/91 (85%) Strand = Plus / Minus Query: 180 aggctcacctgttctggtggtactacaagagcccccagagggtgtcgacgccgtccaagc 239 |||| |||||||||||||||||||||| |||||| || | | |||| ||||| |||| Sbjct: 49836 aggcgcacctgttctggtggtactacaggagcccgcatcgtgcgtcgtcgccggggaagc 49777 Query: 240 catggccgaccgtcctctggctacagggcgg 270 ||||||||||| |||||||||| |||||||| Sbjct: 49776 catggccgaccatcctctggcttcagggcgg 49746 Score = 77.8 bits (39), Expect = 1e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 989 ggcatcatgaacggggtcatcaaggagaagctcaagatcatccccaa 1035 |||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 74484 ggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaa 74438 Score = 75.8 bits (38), Expect = 5e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 1355 cctgccgaccagccttgcattgcgctgagcatgatcggtggcataacccagtctccagcc 1414 ||||| || ||||| |||||||| |||||||||||| || |||||||||||||||||||| Sbjct: 72415 cctgctgatcagccctgcattgcactgagcatgatcagtagcataacccagtctccagcc 72356 Query: 1415 ag 1416 || Sbjct: 72355 ag 72354 Score = 71.9 bits (36), Expect = 7e-09 Identities = 80/94 (85%), Gaps = 3/94 (3%) Strand = Plus / Minus Query: 180 aggctcacctgttctggtggtactacaagagcccccagagggtgtcgacgcc---gtcca 236 |||| |||||||||||||||||||||| |||||| ||| |||||||| |||| | | Sbjct: 15159 aggcgcacctgttctggtggtactacaggagcccgcagcgggtgtcgtcgccggggggga 15100 Query: 237 agccatggccgaccgtcctctggctacagggcgg 270 |||||||||||||| |||||||||| || ||||| Sbjct: 15099 agccatggccgaccatcctctggctgcaaggcgg 15066 Score = 71.9 bits (36), Expect = 7e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 845 gacatgtacaatttcttgctcgacgccggcatggacccggtggcggcggacctgccggcg 904 |||||||||||||||||||| ||| ||||||||||||||||| |||| ||| | |||||| Sbjct: 74643 gacatgtacaatttcttgcttgactccggcatggacccggtgtcggcagacttaccggcg 74584 Score = 69.9 bits (35), Expect = 3e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 670 gctcgcctacgcgccggtgctcctggatgtttcgaggctggacgacaacgccggcgacg 728 |||||| ||| ||||| |||| ||||| || |||||||||||||||||||||||||||| Sbjct: 76174 gctcgcgtacacgccgctgctgctggaggtgtcgaggctggacgacaacgccggcgacg 76116 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1067 gtctacaacgcgctggtcaacgacttcatgaagccaaggatcgacgaggt 1116 |||||||| |||||||||||||| |||||||||||||| ||| ||||||| Sbjct: 74257 gtctacaatgcgctggtcaacgatttcatgaagccaagaatcaacgaggt 74208 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 992 atcatgaacggggtcatcaaggagaagctcaagatcatccccaagga 1038 ||||||||||| ||||||||| |||||||||||| ||||||||||| Sbjct: 29288 atcatgaacggcgtcatcaagcggaagctcaagataatccccaagga 29242 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Minus Query: 742 ggcggcgacggtgaaggagcagatcgcggccgggcggctggccgcctcgcaggggtcgtg 801 ||||||||||||||||||||||||| |||| |||| ||| || | ||||||| |||||| Sbjct: 75987 ggcggcgacggtgaaggagcagatcacggcggggcagcttgcggactcgcagcagtcgtg 75928 Query: 802 g 802 | Sbjct: 75927 g 75927 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 993 tcatgaacggggtcatcaaggagaagctcaagatcatccc 1032 ||||||| || | ||||||||||||||||||||||||||| Sbjct: 13873 tcatgaatggagccatcaaggagaagctcaagatcatccc 13834 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1219 atgggatgggctgaagaacttcctgag 1245 |||||||||||||||||||||| |||| Sbjct: 12187 atgggatgggctgaagaacttcttgag 12161 Score = 46.1 bits (23), Expect = 0.41 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1067 gtctacaacgcgctggtcaacgacttcatgaagcc 1101 |||||||| |||||| |||| |||||||||||||| Sbjct: 13466 gtctacaatgcgctgatcaatgacttcatgaagcc 13432 Score = 42.1 bits (21), Expect = 6.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 849 tgtacaatttcttgctcgacgccggcatggacccggt 885 ||||||| ||| |||||||| |||| ||||||||||| Sbjct: 14002 tgtacaacttcctgctcgacaccgggatggacccggt 13966
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 157 bits (79), Expect = 2e-34 Identities = 124/139 (89%) Strand = Plus / Minus Query: 529 cctcgtcgccgagtcctacggcggaaagtacgcggccacactcggcgtctcggtcgcaag 588 |||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||| | Sbjct: 104218 cctcgtcgccgagtcctacggcggcaagtacgccgccacgctcggcgtctccctcgcccg 104159 Query: 589 ggccgtccgtgccggcgacctcaagatcaagctcgcaggcgtcgcgctcggcgatagctg 648 |||| |||| ||||||| ||||||| ||| |||||| ||||| ||||||||||| ||||| Sbjct: 104158 ggccatccgcgccggcggcctcaagctcacgctcgccggcgtggcgctcggcgacagctg 104099 Query: 649 gatctcgccggaggatttc 667 ||||||||||||||||||| Sbjct: 104098 gatctcgccggaggatttc 104080 Score = 97.6 bits (49), Expect = 1e-16 Identities = 94/109 (86%) Strand = Plus / Minus Query: 275 ggagcgtcgggggtgggcatcggcaacttcatggagatcggccccctcgacgtcaacctg 334 ||||||||||| || || ||||||||||| ||||| ||||||| || |||| | ||||| Sbjct: 104571 ggagcgtcgggcgtcgggctcggcaacttcctggaggtcggcccgctggacggcgacctg 104512 Query: 335 aagcctcgaaactccacgtggctgcagaaggccgacctcatcttcgtgg 383 ||||| || ||| |||||||||||||||||||||||||||||||||| Sbjct: 104511 aagccgcgcggctcgacgtggctgcagaaggccgacctcatcttcgtgg 104463 Score = 89.7 bits (45), Expect = 3e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 1283 gtcaccaaggcctttgtcaggtcctacaagaacctgcatttctactggatccttggcgct 1342 ||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 101720 gtcacaaagggctttgtcagatcctacaaaaacctgcatttctactggatccttggagct 101661 Query: 1343 ggcca 1347 ||||| Sbjct: 101660 ggcca 101656 Score = 71.9 bits (36), Expect = 7e-09 Identities = 80/94 (85%), Gaps = 3/94 (3%) Strand = Plus / Minus Query: 180 aggctcacctgttctggtggtactacaagagcccccagagggtgtcgacgcc---gtcca 236 |||| |||||||||||||||||||||| |||||| ||| |||||||| |||| | | Sbjct: 104756 aggcgcacctgttctggtggtactacaggagcccgcagcgggtgtcgtcgccggggggga 104697 Query: 237 agccatggccgaccgtcctctggctacagggcgg 270 |||||||||||||| |||||||||| || ||||| Sbjct: 104696 agccatggccgaccatcctctggctgcaaggcgg 104663 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 993 tcatgaacggggtcatcaaggagaagctcaagatcatccc 1032 ||||||| || | ||||||||||||||||||||||||||| Sbjct: 103470 tcatgaatggagccatcaaggagaagctcaagatcatccc 103431 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1219 atgggatgggctgaagaacttcctgag 1245 |||||||||||||||||||||| |||| Sbjct: 101784 atgggatgggctgaagaacttcttgag 101758 Score = 46.1 bits (23), Expect = 0.41 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1067 gtctacaacgcgctggtcaacgacttcatgaagcc 1101 |||||||| |||||| |||| |||||||||||||| Sbjct: 103063 gtctacaatgcgctgatcaatgacttcatgaagcc 103029 Score = 42.1 bits (21), Expect = 6.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 849 tgtacaatttcttgctcgacgccggcatggacccggt 885 ||||||| ||| |||||||| |||| ||||||||||| Sbjct: 103599 tgtacaacttcctgctcgacaccgggatggacccggt 103563
>dbj|AB263748.2| Ipomoea trifida DNA, self-incompatibility (S-) locus, haplotype:S1 Length = 309228 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1307 tacaagaacctgcatttctactggatccttggcgctggccactt 1350 |||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 207027 tacaagaacctgcatttctactggattcttggagctggtcactt 206984
>gb|AY448014.1|AY448010S5 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR5 Length = 7191 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 1307 tacaagaacctgcatttctactggatccttggcgctggccactt 1350 |||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 271 tacaagaacctgcatttctactggattcttggagctggtcactt 228
>emb|CT831061.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109E09, full insert sequence Length = 1745 Score = 61.9 bits (31), Expect = 7e-06 Identities = 127/159 (79%) Strand = Plus / Plus Query: 238 gccatggccgaccgtcctctggctacagggcggtcctggagcgtcgggggtgggcatcgg 297 ||||||||||||||| |||||||| ||||| || || || || ||||| ||||| || Sbjct: 295 gccatggccgaccgtgctctggctccagggaggcccgggcgcttcgggcgtgggttatgg 354 Query: 298 caacttcatggagatcggccccctcgacgtcaacctgaagcctcgaaactccacgtggct 357 |||||||||||||||||| || || ||| |||||| || || || ||||| ||||| Sbjct: 355 caacttcatggagatcgggccgctggacaccaaccttaaaccccgcccatccacctggct 414 Query: 358 gcagaaggccgacctcatcttcgtggacaaccctgtggg 396 |||||||||||| ||||||| |||||||| ||||| Sbjct: 415 ctccaaggccgacctcctcttcgtcgacaacccagtggg 453 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 511 gcaggggagccccctctacctcgtcgccgagtcctacggcggaaagt 557 |||||||||||| || ||| ||||||| |||||||||||||| |||| Sbjct: 574 gcaggggagcccactttacatcgtcgcagagtcctacggcggcaagt 620 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1208 cagaagctcaaatgggatgggctgaagaacttc 1240 ||||| ||||| |||||||| |||||||||||| Sbjct: 1277 cagaaactcaagtgggatggtctgaagaacttc 1309
>ref|NM_001069043.1| Oryza sativa (japonica cultivar-group) Os08g0560500 (Os08g0560500) mRNA, complete cds Length = 1747 Score = 61.9 bits (31), Expect = 7e-06 Identities = 127/159 (79%) Strand = Plus / Plus Query: 238 gccatggccgaccgtcctctggctacagggcggtcctggagcgtcgggggtgggcatcgg 297 ||||||||||||||| |||||||| ||||| || || || || ||||| ||||| || Sbjct: 293 gccatggccgaccgtgctctggctccagggaggcccgggcgcttcgggcgtgggttatgg 352 Query: 298 caacttcatggagatcggccccctcgacgtcaacctgaagcctcgaaactccacgtggct 357 |||||||||||||||||| || || ||| |||||| || || || ||||| ||||| Sbjct: 353 caacttcatggagatcgggccgctggacaccaaccttaaaccccgcccatccacctggct 412 Query: 358 gcagaaggccgacctcatcttcgtggacaaccctgtggg 396 |||||||||||| ||||||| |||||||| ||||| Sbjct: 413 ctccaaggccgacctcctcttcgtcgacaacccagtggg 451 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 511 gcaggggagccccctctacctcgtcgccgagtcctacggcggaaagt 557 |||||||||||| || ||| ||||||| |||||||||||||| |||| Sbjct: 572 gcaggggagcccactttacatcgtcgcagagtcctacggcggcaagt 618 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1208 cagaagctcaaatgggatgggctgaagaacttc 1240 ||||| ||||| |||||||| |||||||||||| Sbjct: 1275 cagaaactcaagtgggatggtctgaagaacttc 1307
>dbj|AK119519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C12, full insert sequence Length = 1747 Score = 61.9 bits (31), Expect = 7e-06 Identities = 127/159 (79%) Strand = Plus / Plus Query: 238 gccatggccgaccgtcctctggctacagggcggtcctggagcgtcgggggtgggcatcgg 297 ||||||||||||||| |||||||| ||||| || || || || ||||| ||||| || Sbjct: 293 gccatggccgaccgtgctctggctccagggaggcccgggcgcttcgggcgtgggttatgg 352 Query: 298 caacttcatggagatcggccccctcgacgtcaacctgaagcctcgaaactccacgtggct 357 |||||||||||||||||| || || ||| |||||| || || || ||||| ||||| Sbjct: 353 caacttcatggagatcgggccgctggacaccaaccttaaaccccgcccatccacctggct 412 Query: 358 gcagaaggccgacctcatcttcgtggacaaccctgtggg 396 |||||||||||| ||||||| |||||||| ||||| Sbjct: 413 ctccaaggccgacctcctcttcgtcgacaacccagtggg 451 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 511 gcaggggagccccctctacctcgtcgccgagtcctacggcggaaagt 557 |||||||||||| || ||| ||||||| |||||||||||||| |||| Sbjct: 572 gcaggggagcccactttacatcgtcgcagagtcctacggcggcaagt 618 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1208 cagaagctcaaatgggatgggctgaagaacttc 1240 ||||| ||||| |||||||| |||||||||||| Sbjct: 1275 cagaaactcaagtgggatggtctgaagaacttc 1307
>dbj|AK101389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036J23, full insert sequence Length = 1744 Score = 61.9 bits (31), Expect = 7e-06 Identities = 127/159 (79%) Strand = Plus / Plus Query: 238 gccatggccgaccgtcctctggctacagggcggtcctggagcgtcgggggtgggcatcgg 297 ||||||||||||||| |||||||| ||||| || || || || ||||| ||||| || Sbjct: 300 gccatggccgaccgtgctctggctccagggaggcccgggcgcttcgggcgtgggttatgg 359 Query: 298 caacttcatggagatcggccccctcgacgtcaacctgaagcctcgaaactccacgtggct 357 |||||||||||||||||| || || ||| |||||| || || || ||||| ||||| Sbjct: 360 caacttcatggagatcgggccgctggacaccaaccttaaaccccgcccatccacctggct 419 Query: 358 gcagaaggccgacctcatcttcgtggacaaccctgtggg 396 |||||||||||| ||||||| |||||||| ||||| Sbjct: 420 ctccaaggccgacctcctcttcgtcgacaacccagtggg 458 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 511 gcaggggagccccctctacctcgtcgccgagtcctacggcggaaagt 557 |||||||||||| || ||| ||||||| |||||||||||||| |||| Sbjct: 579 gcaggggagcccactttacatcgtcgcagagtcctacggcggcaagt 625 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1208 cagaagctcaaatgggatgggctgaagaacttc 1240 ||||| ||||| |||||||| |||||||||||| Sbjct: 1282 cagaaactcaagtgggatggtctgaagaacttc 1314
>emb|CT831060.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012O01, full insert sequence Length = 1442 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 511 gcaggggagccccctctacctcgtcgccgagtcctacggcggaaagt 557 |||||||||||| || ||| ||||||| |||||||||||||| |||| Sbjct: 287 gcaggggagcccactttacatcgtcgcagagtcctacggcggcaagt 333 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1208 cagaagctcaaatgggatgggctgaagaacttc 1240 ||||| ||||| |||||||| |||||||||||| Sbjct: 990 cagaaactcaagtgggatggtctgaagaacttc 1022
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 511 gcaggggagccccctctacctcgtcgccgagtcctacggcggaaagt 557 |||||||||||| || ||| ||||||| |||||||||||||| |||| Sbjct: 28063229 gcaggggagcccactttacatcgtcgcagagtcctacggcggcaagt 28063275 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 238 gccatggccgaccgtcctctggctacaggg 267 ||||||||||||||| |||||||| ||||| Sbjct: 28062509 gccatggccgaccgtgctctggctccaggg 28062538
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 511 gcaggggagccccctctacctcgtcgccgagtcctacggcggaaagt 557 |||||||||||| || ||| ||||||| |||||||||||||| |||| Sbjct: 140721 gcaggggagcccactttacatcgtcgcagagtcctacggcggcaagt 140767 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 238 gccatggccgaccgtcctctggctacaggg 267 ||||||||||||||| |||||||| ||||| Sbjct: 140001 gccatggccgaccgtgctctggctccaggg 140030
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 511 gcaggggagccccctctacctcgtcgccgagtcctacggcggaaagt 557 |||||||||||| || ||| ||||||| |||||||||||||| |||| Sbjct: 60724 gcaggggagcccactttacatcgtcgcagagtcctacggcggcaagt 60770 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 238 gccatggccgaccgtcctctggctacaggg 267 ||||||||||||||| |||||||| ||||| Sbjct: 60004 gccatggccgaccgtgctctggctccaggg 60033
>dbj|AK237259.1| Sus scrofa mRNA, clone:SPL010018C04, expressed in spleen Length = 1924 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| |||||||||||||||| |||||||||||| Sbjct: 1234 tttgtcaagtcctacaagaacctggctttctactggat 1271
>dbj|AK230482.1| Sus scrofa mRNA, clone:AMP010001H01, expressed in alveolar macrophage Length = 1933 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| |||||||||||||||| |||||||||||| Sbjct: 1248 tttgtcaagtcctacaagaacctggctttctactggat 1285
>ref|XM_537688.2| PREDICTED: Canis familiaris similar to serine carboxypeptidase 1 precursor protein (LOC480566), mRNA Length = 1958 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1298 gtcaggtcctacaagaacctgcatttctactggatcct 1335 |||| |||||||||||||||| ||||||||||||||| Sbjct: 1318 gtcaagtcctacaagaacctggctttctactggatcct 1355
>ref|NM_001045909.1| Bos taurus similar to serine carboxypeptidase 1 precursor protein (MGC133818), mRNA gb|BC111297.1| Bos taurus similar to serine carboxypeptidase 1 precursor protein, mRNA (cDNA clone MGC:133818 IMAGE:8064139), complete cds Length = 1913 Score = 50.1 bits (25), Expect = 0.026 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1292 gcctttgtcaggtcctacaagaacctgcatttctactggat 1332 |||||||||| |||||||||||| ||| |||||||||||| Sbjct: 1233 gcctttgtcaagtcctacaagaatctggctttctactggat 1273
>gb|AC091263.15| Mus musculus chromosome 9, clone RP23-134F1, complete sequence Length = 204289 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1395 gcataacccagtctccagccagctaggc 1422 |||||||||||||| ||||||||||||| Sbjct: 121681 gcataacccagtctacagccagctaggc 121708
>gb|AC158995.2| Mus musculus BAC clone RP24-81K2 from chromosome 9, complete sequence Length = 169799 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1395 gcataacccagtctccagccagctaggc 1422 |||||||||||||| ||||||||||||| Sbjct: 5340 gcataacccagtctacagccagctaggc 5367
>ref|NM_001029927.1| Rattus norvegicus similar to Probable serine carboxypeptidase CPVL precursor (Carboxypeptidase, vitellogenic-like) (Vitellogenic carboxypeptidase-like protein) (VCP-like protein) (LOC502774), mRNA gb|BC097471.1| Rattus norvegicus similar to Probable serine carboxypeptidase CPVL precursor (Carboxypeptidase, vitellogenic-like) (Vitellogenic carboxypeptidase-like protein) (VCP-like protein), mRNA (cDNA clone MGC:114536 IMAGE:7457768), complete cds Length = 1633 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Plus Query: 251 gtcctctggctacagggcggtcctggag 278 ||||||||||| |||||||||||||||| Sbjct: 347 gtcctctggcttcagggcggtcctggag 374
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 476 ctcaaggcgctggccaaggagctg 499 |||||||||||||||||||||||| Sbjct: 1851608 ctcaaggcgctggccaaggagctg 1851585
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 46.1 bits (23), Expect = 0.41 Identities = 23/23 (100%) Strand = Plus / Minus Query: 750 cggtgaaggagcagatcgcggcc 772 ||||||||||||||||||||||| Sbjct: 2297472 cggtgaaggagcagatcgcggcc 2297450
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 46.1 bits (23), Expect = 0.41 Identities = 23/23 (100%) Strand = Plus / Minus Query: 478 caaggcgctggccaaggagctgc 500 ||||||||||||||||||||||| Sbjct: 2366650 caaggcgctggccaaggagctgc 2366628
>emb|CT573132.12| Zebrafish DNA sequence from clone CH73-375P24 in linkage group 4, complete sequence Length = 111247 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 ctttccctcctcctctgcctct 92 |||||||||||||||||||||| Sbjct: 21184 ctttccctcctcctctgcctct 21205
>gb|AC124231.17| Mus musculus chromosome 18, clone RP23-17N19, complete sequence Length = 219005 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 ctttccctcctcctctgcctct 92 |||||||||||||||||||||| Sbjct: 133244 ctttccctcctcctctgcctct 133265
>gb|AC110194.11| Mus musculus chromosome 7, clone RP23-238J3, complete sequence Length = 223663 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18115 tccctcctcctctgcctctccc 18136 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18169 tccctcctcctctgcctctccc 18190 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18322 tccctcctcctctgcctctccc 18343 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18358 tccctcctcctctgcctctccc 18379 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18394 tccctcctcctctgcctctccc 18415 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18412 tccctcctcctctgcctctccc 18433 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18430 tccctcctcctctgcctctccc 18451 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18448 tccctcctcctctgcctctccc 18469 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18466 tccctcctcctctgcctctccc 18487 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tccctcctcctctgcctctccc 95 |||||||||||||||||||||| Sbjct: 18484 tccctcctcctctgcctctccc 18505
>gb|BC072405.1| Homo sapiens serine carboxypeptidase 1, mRNA (cDNA clone MGC:90281 IMAGE:6137668), complete cds Length = 1629 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 1243 tttgtcaagtcctacaagaaccttgctttctactggat 1280
>gb|BC010078.2| Homo sapiens serine carboxypeptidase 1, mRNA (cDNA clone IMAGE:4328599), partial cds Length = 1953 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 1263 tttgtcaagtcctacaagaaccttgctttctactggat 1300
>gb|DQ143963.2| Streptomyces rimosus oxytetracycline gene cluster, complete sequence Length = 25222 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 478 caaggcgctggccaaggagctg 499 |||||||||||||||||||||| Sbjct: 11102 caaggcgctggccaaggagctg 11123
>gb|AY358559.1| Homo sapiens clone DNA40370 HSCP1 (UNQ265) mRNA, complete cds Length = 1650 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 1273 tttgtcaagtcctacaagaaccttgctttctactggat 1310
>dbj|AK027373.1| Homo sapiens cDNA FLJ14467 fis, clone MAMMA1000672, weakly similar to VITELLOGENIC CARBOXYPEPTIDASE PRECURSOR (EC 3.4.16.-) Length = 1641 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 1266 tttgtcaagtcctacaagaaccttgctttctactggat 1303
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 tcggccccctcgacgtcaacct 333 |||||||||||||||||||||| Sbjct: 4863956 tcggccccctcgacgtcaacct 4863977
>gb|AF165144.4| Homo sapiens chromosome 8 clone CTA-393A7 map 8cen, complete sequence Length = 110994 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 493 ggagctgcccaccctgcagcag 514 |||||||||||||||||||||| Sbjct: 102049 ggagctgcccaccctgcagcag 102028
>gb|AF113214.1| Homo sapiens MSTP034 mRNA, complete cds Length = 1902 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 1218 tttgtcaagtcctacaagaaccttgctttctactggat 1255
>gb|AC007114.8| Homo sapiens chromosome 17, clone RP11-166P13, complete sequence Length = 148781 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 124747 tttgtcaagtcctacaagaaccttgctttctactggat 124710
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 727 cgccgccaagaagaaggcggcg 748 |||||||||||||||||||||| Sbjct: 280955 cgccgccaagaagaaggcggcg 280976
>emb|BX649332.3| Zebrafish DNA sequence from clone CH211-243P21 in linkage group 4, complete sequence Length = 122049 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 ctttccctcctcctctgcctct 92 |||||||||||||||||||||| Sbjct: 101310 ctttccctcctcctctgcctct 101289
>gb|AF265441.1|AF265441 Homo sapiens DC39 mRNA, complete cds Length = 1421 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 762 tttgtcaagtcctacaagaaccttgctttctactggat 799
>emb|CR625202.1| full-length cDNA clone CS0DC026YC22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1592 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 1248 tttgtcaagtcctacaagaaccttgctttctactggat 1285
>emb|CR609709.1| full-length cDNA clone CS0DM010YB22 of Fetal liver of Homo sapiens (human) Length = 1851 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 1256 tttgtcaagtcctacaagaaccttgctttctactggat 1293
>emb|CR614420.1| full-length cDNA clone CS0DC029YC14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1888 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 1261 tttgtcaagtcctacaagaaccttgctttctactggat 1298
>ref|NM_021626.1| Homo sapiens serine carboxypeptidase 1 (SCPEP1), mRNA gb|AF282618.1|AF282618 Homo sapiens serine carboxypeptidase 1 precursor protein (HSCP1) mRNA, complete cds Length = 1921 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1295 tttgtcaggtcctacaagaacctgcatttctactggat 1332 ||||||| ||||||||||||||| |||||||||||| Sbjct: 1272 tttgtcaagtcctacaagaaccttgctttctactggat 1309
>gb|AE005113.1| Halobacterium sp. NRC-1 section 144 of 170 of the complete genome Length = 11086 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 870 ccggcatggacccggtggcggc 891 |||||||||||||||||||||| Sbjct: 8092 ccggcatggacccggtggcggc 8113
>gb|CP000482.1| Pelobacter propionicus DSM 2379, complete genome Length = 4008000 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 aaggcgctggccaaggagctg 499 ||||||||||||||||||||| Sbjct: 571964 aaggcgctggccaaggagctg 571984
>ref|XM_001220991.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_01771) mRNA, complete cds Length = 2121 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 724 cgacgccgccaagaagaaggc 744 ||||||||||||||||||||| Sbjct: 1938 cgacgccgccaagaagaaggc 1958
>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence Length = 2646969 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 590 gccgtccgtgccggcgacctc 610 ||||||||||||||||||||| Sbjct: 2221577 gccgtccgtgccggcgacctc 2221557
>ref|XM_001135514.1| PREDICTED: Pan troglodytes hypothetical protein LOC735886 (LOC735886), mRNA Length = 1680 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 gctgcccaccctgcagcaggg 516 ||||||||||||||||||||| Sbjct: 144 gctgcccaccctgcagcaggg 164
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 665 ttcacgctcgcctacgcgccggtgc 689 |||||||||||| |||||||||||| Sbjct: 839785 ttcacgctcgccgacgcgccggtgc 839761 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 766 cgcggccgggcggctggccgc 786 ||||||||||||||||||||| Sbjct: 2215791 cgcggccgggcggctggccgc 2215811 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 622 cgcaggcgtcgcgctcggcga 642 ||||||||||||||||||||| Sbjct: 7255425 cgcaggcgtcgcgctcggcga 7255445
>gb|AC188694.1| Macaca mulatta chromosome UNK clone CH250-56H12, complete sequence Length = 184607 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1655 ataaaactgcaatgttccaaa 1675 ||||||||||||||||||||| Sbjct: 119278 ataaaactgcaatgttccaaa 119298
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 ctcaaggcgctggccaaggag 496 ||||||||||||||||||||| Sbjct: 5229007 ctcaaggcgctggccaaggag 5228987
>gb|CP000320.1| Nitrobacter hamburgensis X14 plasmid 1, complete sequence Length = 294829 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 99 tccgggccagctccgccagctccgtcacc 127 ||||||||| ||||||| ||||||||||| Sbjct: 115688 tccgggccacctccgcccgctccgtcacc 115716
>gb|AC117562.6| Mus musculus chromosome 1, clone RP23-366C12, complete sequence Length = 149980 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctctgcctctcccag 97 ||||||||||||||||||||| Sbjct: 22238 ctcctcctctgcctctcccag 22218
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 475 cctcaaggcgctggccaaggagctg 499 ||||||||| ||||||||||||||| Sbjct: 1078856 cctcaaggccctggccaaggagctg 1078880
>gb|AY359472.4| Xanthomonas campestris putative responder (smeR), putative kinase sensor (smeS), and inner membrane protein (smeA) genes, complete cds; and unknown genes Length = 9200 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1074 acgcgctggtcaacgacttca 1094 ||||||||||||||||||||| Sbjct: 7378 acgcgctggtcaacgacttca 7358
>gb|AC130221.4| Mus musculus BAC clone RP23-168E11 from chromosome 5, complete sequence Length = 200384 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 126760 ctttccctcctcctctgcctc 126780
>gb|AC025116.14| Mus musculus chromosome 1, clone RP23-124O19, complete sequence Length = 233298 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctctgcctctcccag 97 ||||||||||||||||||||| Sbjct: 213375 ctcctcctctgcctctcccag 213355
>ref|NM_173226.1| Danio rerio thrombospondin 4 (thbs4), mRNA gb|AY081009.1| Danio rerio thrombospondin 4 mRNA, complete cds Length = 3388 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1223 gatgggctgaagaacttcctg 1243 ||||||||||||||||||||| Sbjct: 1822 gatgggctgaagaacttcctg 1842
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 727 cgccgccaagaagaaggcggc 747 ||||||||||||||||||||| Sbjct: 2981961 cgccgccaagaagaaggcggc 2981941
>gb|BC095593.1| Danio rerio thrombospondin 4, mRNA (cDNA clone MGC:111910 IMAGE:7406979), complete cds Length = 3431 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1223 gatgggctgaagaacttcctg 1243 ||||||||||||||||||||| Sbjct: 1832 gatgggctgaagaacttcctg 1852
>ref|XM_753433.1| Ustilago maydis 521 hypothetical protein (UM02379.1) partial mRNA Length = 3270 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 609 tcaagatcaagctcgcaggcg 629 ||||||||||||||||||||| Sbjct: 2573 tcaagatcaagctcgcaggcg 2553
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 ctcaaggcgctggccaaggag 496 ||||||||||||||||||||| Sbjct: 930408 ctcaaggcgctggccaaggag 930388
>gb|AE005712.1| Caulobacter crescentus CB15 section 38 of 359 of the complete genome Length = 10306 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 767 gcggccgggcggctggccgcc 787 ||||||||||||||||||||| Sbjct: 5163 gcggccgggcggctggccgcc 5183
>emb|BX510337.13| Zebrafish DNA sequence from clone DKEY-27L20 in linkage group 9, complete sequence Length = 170615 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 4202 ctttccctcctcctctgcctc 4222
>gb|AF173226.1| Stenotrophomonas maltophilia multidrug efflux system SmeR (smeR), SmeS (smeS), SmeA (smeA), SmeB (smeB), and SmeC (smeC) genes, complete cds Length = 8560 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1074 acgcgctggtcaacgacttca 1094 ||||||||||||||||||||| Sbjct: 1765 acgcgctggtcaacgacttca 1745
>gb|AC016868.8| Homo sapiens chromosome 8, clone RP11-15G16, complete sequence Length = 155691 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 105328 ctttccctcctcctctgcctc 105348
>emb|Z75747.2|HSU96H1 Human DNA sequence from clone LL0XNC01-96H1 on chromosome X, complete sequence Length = 39055 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1613 aatttcagtgtgagatttgtgtttc 1637 ||||||||||||| ||||||||||| Sbjct: 14328 aatttcagtgtgaaatttgtgtttc 14352
>emb|AL512784.6| Human DNA sequence from clone CTD-2301L1 on chromosome 20 Contains the 5' end of a novel gene (KIAA0964) and a CpG island, complete sequence Length = 13925 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 6385 ctttccctcctcctctgcctc 6365
>emb|AL109916.17|HSDJ139A3 Human DNA sequence from clone RP1-139A3 on chromosome 6q21-22.1 Contains part of the FYN gene for the FYN oncogene related to SRC, FGR, YES, complete sequence Length = 49183 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ccctcctcctctgcctctccc 95 ||||||||||||||||||||| Sbjct: 36635 ccctcctcctctgcctctccc 36615
>emb|CR354557.9| Zebrafish DNA sequence from clone DKEY-34I7 in linkage group 23, complete sequence Length = 127420 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 23654 ctttccctcctcctctgcctc 23634
>emb|CR792413.5| Zebrafish DNA sequence from clone CH211-47D3 in linkage group 4, complete sequence Length = 39974 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 23070 ctttccctcctcctctgcctc 23090
>emb|BX321888.21| Zebrafish DNA sequence from clone DKEYP-47D4 in linkage group 20, complete sequence Length = 176463 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 146973 ctttccctcctcctctgcctc 146993
>gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, complete sequence Length = 174995 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1218 aatgggatgggctgaagaact 1238 ||||||||||||||||||||| Sbjct: 105486 aatgggatgggctgaagaact 105506
>emb|BX255905.4| Zebrafish DNA sequence from clone DKEY-11B8 in linkage group 20, complete sequence Length = 118677 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 113346 ctttccctcctcctctgcctc 113326
>emb|BX548021.6| Zebrafish DNA sequence from clone DKEY-164F24 in linkage group 8, complete sequence Length = 202392 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 121855 ctttccctcctcctctgcctc 121835
>emb|CR354599.10| Zebrafish DNA sequence from clone CH211-259K16 in linkage group 13, complete sequence Length = 149455 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 131466 ctttccctcctcctctgcctc 131446
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 caaggcgctggccaaggagct 498 ||||||||||||||||||||| Sbjct: 1307957 caaggcgctggccaaggagct 1307977
>emb|CR385046.9| Zebrafish DNA sequence from clone CH211-217P23 in linkage group 8, complete sequence Length = 206751 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 190386 ctttccctcctcctctgcctc 190366 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 197719 ctttccctcctcctctgcctc 197699
>dbj|AK107241.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-F05, full insert sequence Length = 3153 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 477 tcaaggcgctggccaaggagctgcccaccctgc 509 ||||||||||||||||||| ||| |||| |||| Sbjct: 911 tcaaggcgctggccaaggatctgaccacgctgc 943
>emb|BX119902.4| Zebrafish DNA sequence from clone CH211-137I24 in linkage group 5, complete sequence Length = 170241 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 33534 ctttccctcctcctctgcctc 33554
>dbj|AP005232.3| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-383L23, complete sequence Length = 37909 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 ctgcccaccctgcagcagggg 517 ||||||||||||||||||||| Sbjct: 26719 ctgcccaccctgcagcagggg 26699
>emb|AL162151.5|CNS01RHO Human chromosome 14 DNA sequence BAC C-3104H21 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 231893 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 486 tggccaaggagctgcccaccctgca 510 |||||||||||||||| |||||||| Sbjct: 129954 tggccaaggagctgccgaccctgca 129978
>gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome 5, complete sequence Length = 236596 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ctttccctcctcctctgcctc 91 ||||||||||||||||||||| Sbjct: 2122 ctttccctcctcctctgcctc 2102
>gb|U20507.1|OCU20507 Oryctolagus cuniculus bradykinin B1 receptor mRNA, complete cds Length = 1189 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 981 ccctcagcggcatcatgaacggggtcatcaagg 1013 ||||| || ||||| |||||||||||||||||| Sbjct: 436 ccctctgccgcatcgtgaacggggtcatcaagg 468
>emb|AL583884.20| Mouse DNA sequence from clone RP23-324B16 on chromosome 15, complete sequence Length = 202342 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 cctcctctgcctctcccagct 99 ||||||||||||||||||||| Sbjct: 92005 cctcctctgcctctcccagct 91985
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1373 attgcgctgagcatgatcggt 1393 ||||||||||||||||||||| Sbjct: 4536296 attgcgctgagcatgatcggt 4536276 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 243,963,701 Number of extensions: 13044300 Number of successful extensions: 292423 Number of sequences better than 10.0: 91 Number of HSP's gapped: 292398 Number of HSP's successfully gapped: 196 Length of query: 1692 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1669 Effective length of database: 18,503,978,556 Effective search space: 30883140209964 Effective search space used: 30883140209964 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
