ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf99j07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK069238:Os10g0524600 | 55 | 1e-08 | 2 | AK069220:Os03g0119300 | 50 | 5e-07 | 3 | AK100551:Os02g0665300 | 40 | 4e-04 | 4 | AK072929:Os02g0665300 | 40 | 4e-04 | 5 | AB037371:Os02g0665300 | 40 | 4e-04 | 6 | AK119348:Os07g0685900 | 36 | 0.007 | 7 | AK064686:Os05g0368700 | 34 | 0.027 | 8 | Os03g0430500:Os03g0430500 | 31 | 0.18 | 9 | AK110186: | 29 | 0.67 | 10 | Os04g0559000:Os04g0559000 | 28 | 1.5 | 11 | AK119942:Os12g0571500 | 28 | 1.9 | 12 | AK103255:Os03g0761500 | 27 | 2.5 | 13 | AK101646:Os03g0761500 | 27 | 2.5 | 14 | Os09g0496400:Os09g0496400 | 27 | 3.3 | 15 | Os12g0427600:Os12g0427600 | 26 | 5.6 | 16 | Os10g0394200:Os10g0394200 | 26 | 7.4 | 17 | AK073786:Os09g0419500 | 25 | 9.6 | 18 | AK064394:Os09g0419500 | 25 | 9.6 |
|---|
>AK069238:Os10g0524600 | Length = 759 Score = 55.1 bits (131), Expect = 1e-08 Identities = 24/28 (85%), Positives = 27/28 (96%) Frame = +1 Query: 1 VAGAEGNLKWVSDDHIVRSPIVVPAKAA 84 VAGAEGNLKWVSD+HIVRSPI++PA AA Sbjct: 732 VAGAEGNLKWVSDEHIVRSPIIIPATAA 759
>AK069220:Os03g0119300 | Length = 754 Score = 49.7 bits (117), Expect = 5e-07 Identities = 23/28 (82%), Positives = 26/28 (92%), Gaps = 1/28 (3%) Frame = +1 Query: 1 VAGAEGNLKWVSDDHIVRSPIVV-PAKA 81 VAG EGNLKWVSD+H+VRSPIV+ PAKA Sbjct: 725 VAGVEGNLKWVSDEHVVRSPIVIPPAKA 752
>AK100551:Os02g0665300 | Length = 791 Score = 40.0 bits (92), Expect = 4e-04 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +1 Query: 10 AEGNLKWVSDDHIVRSPIVVPAK 78 AEG L+WVS DH+VRSPIVV A+ Sbjct: 754 AEGQLRWVSPDHVVRSPIVVSAQ 776
>AK072929:Os02g0665300 | Length = 791 Score = 40.0 bits (92), Expect = 4e-04 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +1 Query: 10 AEGNLKWVSDDHIVRSPIVVPAK 78 AEG L+WVS DH+VRSPIVV A+ Sbjct: 754 AEGQLRWVSPDHVVRSPIVVSAQ 776
>AB037371:Os02g0665300 | Length = 791 Score = 40.0 bits (92), Expect = 4e-04 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +1 Query: 10 AEGNLKWVSDDHIVRSPIVVPAK 78 AEG L+WVS DH+VRSPIVV A+ Sbjct: 754 AEGQLRWVSPDHVVRSPIVVSAQ 776
>AK119348:Os07g0685900 | Length = 781 Score = 35.8 bits (81), Expect = 0.007 Identities = 14/23 (60%), Positives = 20/23 (86%) Frame = +1 Query: 1 VAGAEGNLKWVSDDHIVRSPIVV 69 VA EG+L+WVS +H+VRSP+V+ Sbjct: 734 VAVLEGSLRWVSPEHVVRSPVVL 756
>AK064686:Os05g0368700 | Length = 340 Score = 33.9 bits (76), Expect = 0.027 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +1 Query: 10 AEGNLKWVSDDHIVRSPIV 66 AEG+L+WVS H+VRSPIV Sbjct: 306 AEGSLRWVSRRHVVRSPIV 324
>Os03g0430500:Os03g0430500 | Length = 785 Score = 31.2 bits (69), Expect = 0.18 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +1 Query: 13 EGNLKWVSDDHIVRSPIV 66 EG+L WVS H++RSPIV Sbjct: 757 EGSLSWVSGKHVMRSPIV 774
>AK110186: | Length = 1213 Score = 29.3 bits (64), Expect = 0.67 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = -2 Query: 217 CSSLHAASATAKPWKRSSLLKY 152 CS+ H AS T++PW R++ L++ Sbjct: 238 CSTNHIASETSRPWTRATSLRF 259
>Os04g0559000:Os04g0559000 | Length = 760 Score = 28.1 bits (61), Expect = 1.5 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +1 Query: 13 EGNLKWVSDDHIVRSPIVV 69 +G ++WVS+ H VRSP+ V Sbjct: 739 QGAVRWVSETHTVRSPVSV 757
>AK119942:Os12g0571500 | Length = 143 Score = 27.7 bits (60), Expect = 1.9 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -2 Query: 106 AAVCRITTRPWLEPQWGSARCGHRRP 29 A C RP+ P RCGHRRP Sbjct: 118 AGGCAARGRPYTRPCTYGNRCGHRRP 143
>AK103255:Os03g0761500 | Length = 764 Score = 27.3 bits (59), Expect = 2.5 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = +1 Query: 16 GNLKWVSDDHIVRSPIVV 69 G L W SD H+V SPI V Sbjct: 744 GRLVWSSDHHVVSSPIAV 761
>AK101646:Os03g0761500 | Length = 764 Score = 27.3 bits (59), Expect = 2.5 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = +1 Query: 16 GNLKWVSDDHIVRSPIVV 69 G L W SD H+V SPI V Sbjct: 744 GRLVWSSDHHVVSSPIAV 761
>Os09g0496400:Os09g0496400 | Length = 104 Score = 26.9 bits (58), Expect = 3.3 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -2 Query: 103 AVCRITTRPWLEPQWGSARCGHRRPTSG 20 A C + RPW+ P R RRP SG Sbjct: 77 ADCERSARPWIAPAPARERIQSRRPGSG 104
>Os12g0427600:Os12g0427600 | Length = 732 Score = 26.2 bits (56), Expect = 5.6 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +1 Query: 10 AEGNLKWVSDDHIV 51 AEG+ KWVS+ H+V Sbjct: 683 AEGSFKWVSEKHVV 696
>Os10g0394200:Os10g0394200 | Length = 773 Score = 25.8 bits (55), Expect = 7.4 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +1 Query: 16 GNLKWVSDDHIVRSPI 63 G + W+S H+VRSPI Sbjct: 752 GWISWMSSQHVVRSPI 767
>AK073786:Os09g0419500 | Length = 398 Score = 25.4 bits (54), Expect = 9.6 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -2 Query: 115 AIHAAVCRITTRPWLEPQWGSARC 44 A+H CR P L +WG A C Sbjct: 242 ALHPEACRDVIPPQLFQRWGDALC 265
>AK064394:Os09g0419500 | Length = 317 Score = 25.4 bits (54), Expect = 9.6 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -2 Query: 115 AIHAAVCRITTRPWLEPQWGSARC 44 A+H CR P L +WG A C Sbjct: 161 ALHPEACRDVIPPQLFQRWGDALC 184 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 7,376,040 Number of extensions: 131688 Number of successful extensions: 380 Number of sequences better than 10.0: 18 Number of HSP's gapped: 380 Number of HSP's successfully gapped: 18 Length of query: 93 Length of database: 15,399,855 Length adjustment: 63 Effective length of query: 30 Effective length of database: 12,877,272 Effective search space: 386318160 Effective search space used: 386318160 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
