ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf99j07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q67PG5:RL32_SYMTH 50S ribosomal protein L32 - Symbiobacterium th... 30 3.3

>Q67PG5:RL32_SYMTH 50S ribosomal protein L32 - Symbiobacterium thermophilum|
          Length = 64
 Score = 29.6 bits (65), Expect = 3.3
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +3

Query: 36  R*PHRAEPHCGSSQGRVVILQTA 104
           R PHR  P+CG  QGRVVI   A
Sbjct: 38  RLPHRVCPNCGYYQGRVVIQHEA 60


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 43,475,809
Number of extensions: 720130
Number of successful extensions: 1600
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1600
Number of HSP's successfully gapped: 1
Length of query: 93
Length of database: 100,686,439
Length adjustment: 63
Effective length of query: 30
Effective length of database: 83,405,854
Effective search space: 2502175620
Effective search space used: 2502175620
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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