ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf97c20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104970:Os05g0122900 | 88 | 5e-18 | 2 | AK099375:Os05g0122900 | 88 | 5e-18 | 3 | AK071296:Os05g0122900 | 88 | 5e-18 | 4 | AB072977:Os05g0122900 | 88 | 5e-18 | 5 | Os06g0725400:Os06g0725400 | 51 | 3e-10 | 6 | AY224549:Os01g0109700 | 29 | 3.4 | 7 | AK121497:Os01g0109700 | 29 | 3.4 | 8 | AK073919:Os02g0817200 | 28 | 5.8 | 9 | AK068523:Os01g0227100 | 27 | 9.9 |
|---|
>AK104970:Os05g0122900 | Length = 81 Score = 88.2 bits (217), Expect = 5e-18 Identities = 37/38 (97%), Positives = 38/38 (100%) Frame = +1 Query: 133 IPHNKRWHTVAGKGLCAVMWFWIFYRAKQDGAVLLGMR 246 IPHNKRWHTVAGKGLCAVMWFW+FYRAKQDGAVLLGMR Sbjct: 17 IPHNKRWHTVAGKGLCAVMWFWVFYRAKQDGAVLLGMR 54
>AK099375:Os05g0122900 | Length = 81 Score = 88.2 bits (217), Expect = 5e-18 Identities = 37/38 (97%), Positives = 38/38 (100%) Frame = +1 Query: 133 IPHNKRWHTVAGKGLCAVMWFWIFYRAKQDGAVLLGMR 246 IPHNKRWHTVAGKGLCAVMWFW+FYRAKQDGAVLLGMR Sbjct: 17 IPHNKRWHTVAGKGLCAVMWFWVFYRAKQDGAVLLGMR 54
>AK071296:Os05g0122900 | Length = 81 Score = 88.2 bits (217), Expect = 5e-18 Identities = 37/38 (97%), Positives = 38/38 (100%) Frame = +1 Query: 133 IPHNKRWHTVAGKGLCAVMWFWIFYRAKQDGAVLLGMR 246 IPHNKRWHTVAGKGLCAVMWFW+FYRAKQDGAVLLGMR Sbjct: 17 IPHNKRWHTVAGKGLCAVMWFWVFYRAKQDGAVLLGMR 54
>AB072977:Os05g0122900 | Length = 81 Score = 88.2 bits (217), Expect = 5e-18 Identities = 37/38 (97%), Positives = 38/38 (100%) Frame = +1 Query: 133 IPHNKRWHTVAGKGLCAVMWFWIFYRAKQDGAVLLGMR 246 IPHNKRWHTVAGKGLCAVMWFW+FYRAKQDGAVLLGMR Sbjct: 17 IPHNKRWHTVAGKGLCAVMWFWVFYRAKQDGAVLLGMR 54
>Os06g0725400:Os06g0725400 | Length = 53 Score = 51.2 bits (121), Expect(2) = 3e-10 Identities = 20/20 (100%), Positives = 20/20 (100%) Frame = +1 Query: 133 IPHNKRWHTVAGKGLCAVMW 192 IPHNKRWHTVAGKGLCAVMW Sbjct: 12 IPHNKRWHTVAGKGLCAVMW 31 Score = 31.2 bits (69), Expect(2) = 3e-10 Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 2/21 (9%) Frame = +2 Query: 227 LCS--WVCVILGMAMMITLMV 283 LC+ WVCVILGM MM LMV Sbjct: 26 LCAVMWVCVILGMVMMTILMV 46
>AY224549:Os01g0109700 | Length = 181 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -1 Query: 505 PKHFPPQQASNKISLGAKQINTFKQHRDEMTYGCAFISRDSRRDMQHNSS 356 PKH+P A NK LGA +N H +T G S R Q+ S Sbjct: 95 PKHYPMPPAGNKTELGASVLN---DHWVSVTSGSEDYSFKHMRKNQYEES 141
>AK121497:Os01g0109700 | Length = 1326 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -1 Query: 505 PKHFPPQQASNKISLGAKQINTFKQHRDEMTYGCAFISRDSRRDMQHNSS 356 PKH+P A NK LGA +N H +T G S R Q+ S Sbjct: 397 PKHYPMPPAGNKTELGASVLN---DHWVSVTSGSEDYSFKHMRKNQYEES 443
>AK073919:Os02g0817200 | Length = 375 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/37 (29%), Positives = 24/37 (64%) Frame = +1 Query: 487 AVGNASASMCCCDHHRQSSWVL*EILRKYISCSRSTV 597 AVG+ + S+C C + + ++W + +++RK S ++V Sbjct: 114 AVGSGAKSVCICYYEQDNNWWISKVVRKKHESSVTSV 150
>AK068523:Os01g0227100 | Length = 504 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = +3 Query: 135 PPQQALAHRRRQGPLRRHVVLDFLQG*AGRRCALGYA 245 PP A A RRR+GPL + + +QG AG R A A Sbjct: 54 PPTTAEARRRRKGPL--YKLKAAIQGLAGSRSAAAEA 88 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,530,237 Number of extensions: 275951 Number of successful extensions: 728 Number of sequences better than 10.0: 9 Number of HSP's gapped: 727 Number of HSP's successfully gapped: 10 Length of query: 229 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 132 Effective length of database: 11,515,878 Effective search space: 1520095896 Effective search space used: 1520095896 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
