ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf97c20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os05g03150:12005.t00212:unspliced-genomic expressed protein 72 1e-19
2LOC_Os06g50970:12006.t04781:unspliced-genomic expressed protein 61 1e-16
3LOC_Os09g36740:12009.t03150:unspliced-genomic TPR Domain con... 32 2.8
4LOC_Os10g28060:12010.t02161:unspliced-genomic fatty acid elo... 32 3.8
5LOC_Os11g25700:12011.t02186:unspliced-genomic tropinone redu... 32 3.8
6LOC_Os12g44070:12012.t04073:unspliced-genomic nitrate and ch... 29 4.9
7LOC_Os01g27170:12001.t02421:unspliced-genomic potassium tran... 32 5.2
8LOC_Os04g42860:12004.t03832:unspliced-genomic anther-specifi... 28 6.0
9LOC_Os07g18130:12007.t01672:unspliced-genomic hypothetical p... 31 7.1
10LOC_Os03g60340:12003.t05272:unspliced-genomic expressed protein 31 7.1
11LOC_Os01g16146:12001.t01465:unspliced-genomic phenazine bios... 31 7.1
12LOC_Os12g33280:12012.t03020:unspliced-genomic retrotransposo... 31 7.2
13LOC_Os08g32950:12008.t03038:unspliced-genomic hypothetical p... 31 7.2
14LOC_Os08g12800:12008.t01158:unspliced-genomic glucan endo-1,... 31 7.2
15LOC_Os12g05550:12012.t00443:unspliced-genomic sialyltransfer... 24 9.2
16LOC_Os11g06730:12011.t00565:unspliced-genomic ECA1 protein, ... 31 9.8
17LOC_Os07g47370:12007.t04373:unspliced-genomic pentatricopept... 31 9.8
18LOC_Os04g38990:12004.t03469:unspliced-genomic hypothetical p... 31 9.8
19LOC_Os02g29400:12002.t02634:unspliced-genomic mitochondrial ... 31 9.8
20LOC_Os11g10280:12011.t00920:unspliced-genomic receptor-like ... 31 9.8
21LOC_Os04g49860:12004.t04500:unspliced-genomic EMB2411, putat... 31 9.8
22LOC_Os03g61820:12003.t05412:unspliced-genomic flap endonucle... 31 9.8

>LOC_Os05g03150:12005.t00212:unspliced-genomic expressed protein|
          Length = 2772
 Score = 71.6 bits (150), Expect(3) = 1e-19
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +3 / +2

                                       
Query: 111 HDLQGLHHPPQQALAHRRRQGPLRRHVV 194
           HD+QG+HHPPQQALAHRRRQGPLRRHVV
Sbjct: 107 HDVQGVHHPPQQALAHRRRQGPLRRHVV 190



 Score = 39.6 bits (80), Expect(3) = 1e-19
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +1 / +2

                           
Query: 193  FWIFYRAKQDGAVLL 237
            FW+FYRAKQDGAVLL
Sbjct: 1505 FWVFYRAKQDGAVLL 1549



 Score = 29.0 bits (57), Expect(3) = 1e-19
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2 / +1

                          
Query: 242  CVILGMAMMITLMV 283
            CVILGM MMIT MV
Sbjct: 1630 CVILGMVMMITHMV 1671



 Score = 59.3 bits (123), Expect(3) = 4e-14
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = -3 / -3

                                   
Query: 191 HMTAQRPLPATVCQRLLWGMV*PL 120
           HMTAQRPLPATVCQRLLWGMV PL
Sbjct: 187 HMTAQRPLPATVCQRLLWGMVYPL 116



 Score = 35.9 bits (72), Expect(3) = 4e-14
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -2 / -3

                            
Query: 237  QEHSAVLLSPVENPKP 190
            QE+S VLLSPVENPKP
Sbjct: 1549 QENSTVLLSPVENPKP 1502



 Score = 26.3 bits (51), Expect(3) = 4e-14
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -2 / -2

                       
Query: 273  VIIMAIPRMTH 241
            VIIM IPRMTH
Sbjct: 1661 VIIMTIPRMTH 1629



 Score = 59.7 bits (124), Expect(2) = 1e-12
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +1 / +3

                                
Query: 133 IPHNKRWHTVAGKGLCAVMWF 195
           IPHNKRWHTVAGKGLCAVMW+
Sbjct: 129 IPHNKRWHTVAGKGLCAVMWY 191



 Score = 36.8 bits (74), Expect(2) = 1e-12
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2 / +3

                            
Query: 191  GFGFSTGLSRTALCSW 238
            GFGFSTGLSRT L SW
Sbjct: 1503 GFGFSTGLSRTVLFSW 1550



 Score = 32.2 bits (64), Expect(2) = 0.042
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -3 / -1

                             
Query: 242  IPKSTAPSCLAL*KIQN 192
            I K TAPSCLAL*K QN
Sbjct: 1554 ITKRTAPSCLAL*KTQN 1504



 Score = 24.0 bits (46), Expect(2) = 0.042
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -3 / -3

                         
Query: 275  E*SSWPSQG*RIP 237
            E*SS PSQG*R+P
Sbjct: 1663 E*SS*PSQG*RMP 1625



 Score = 30.9 bits (61), Expect = 9.8
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3 / +1

                            
Query: 192  VLDFLQG*AGRRCALG 239
            VL FLQG*AGR C+LG
Sbjct: 1504 VLGFLQG*AGRCCSLG 1551



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>LOC_Os06g50970:12006.t04781:unspliced-genomic expressed protein|
          Length = 2362

 Score = 61.1 bits (127), Expect(3) = 1e-16
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = +1 / +2

                                
Query: 133 IPHNKRWHTVAGKGLCAVMWF 195
           IPHNKRWHTVAGKGLCAVMWF
Sbjct: 68  IPHNKRWHTVAGKGLCAVMWF 130



 Score = 39.6 bits (80), Expect(3) = 1e-16
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +1 / +3

                           
Query: 193  FWIFYRAKQDGAVLL 237
            FW+FYRAKQDGAVLL
Sbjct: 969  FWVFYRAKQDGAVLL 1013



 Score = 29.0 bits (57), Expect(3) = 1e-16
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +2 / +2

                           
Query: 239  VCVILGMAMMITLMV 283
            VCVILGM MM  LMV
Sbjct: 1091 VCVILGMVMMTILMV 1135



 Score = 50.6 bits (104), Expect(3) = 4e-11
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = -3 / -2

                                 
Query: 194 NHMTAQRPLPATVCQRLLWGMV 129
           NHMTAQRPLPATVC RLL GMV
Sbjct: 129 NHMTAQRPLPATVCHRLLCGMV 64



 Score = 35.4 bits (71), Expect(3) = 4e-11
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -2 / -3

                            
Query: 237  QEHSAVLLSPVENPKP 190
            QE+S +LLSPVENPKP
Sbjct: 1013 QENSTILLSPVENPKP 966



 Score = 24.4 bits (47), Expect(3) = 4e-11
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1 / -2

                                      
Query: 499  HFPPQQASNKISLGAKQINTFKQHRD 422
            H PP + S K  L    +N+ KQH +
Sbjct: 2064 HIPPLKLSQKQILNQFALNS*KQHEN 1987



 Score = 54.7 bits (113), Expect(2) = 1e-10
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +3 / +1

                                  
Query: 126 LHHPPQQALAHRRRQGPLRRHVV 194
           +HHP QQA+AHRRRQGPLRRHVV
Sbjct: 61  VHHPAQQAVAHRRRQGPLRRHVV 129



 Score = 34.5 bits (69), Expect(2) = 1e-10
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +2 / +1

                                
Query: 191  GFGFSTGLSRTALCSWVCVI 250
            GFGFSTGLSR  L SW   I
Sbjct: 967  GFGFSTGLSRMVLFSWYYAI 1026



 Score = 33.6 bits (67), Expect = 1.5
 Identities = 15/24 (62%), Positives = 15/24 (62%)
 Frame = -3 / -1

                                    
Query: 263  WPSQG*RIPKSTAPSCLAL*KIQN 192
            W    *   K TAPSCLAL*K QN
Sbjct: 1039 WSKSK*HSTKRTAPSCLAL*KTQN 968



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>LOC_Os09g36740:12009.t03150:unspliced-genomic TPR Domain containing protein, expressed|
          Length = 2219

 Score = 31.8 bits (63), Expect(2) = 2.8
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +3 / +3

                                   
Query: 123 GLHHPPQQALAHRRRQGPLRRHVV 194
           G H P Q  L  RR QGP RRH V
Sbjct: 222 GGHAPDQLRLLPRRPQGPRRRHAV 293



 Score = 21.7 bits (41), Expect(2) = 2.8
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +2 / +1

                 
Query: 230 CSWVCV 247
           CSWVCV
Sbjct: 904 CSWVCV 921



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>LOC_Os10g28060:12010.t02161:unspliced-genomic fatty acid elongase, putative, expressed|
          Length = 5131

 Score = 32.2 bits (64), Expect = 3.8
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +3 / +2

                                              
Query: 144  QALAHRRRQGPLRRHVVLDFLQG*AGRRCALGYA 245
            +  AHRRR+GP RR   +D   G A RR A G A
Sbjct: 4784 EGAAHRRRRGPRRRRQPVDEGGGHAPRRRAQGGA 4885



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>LOC_Os11g25700:12011.t02186:unspliced-genomic tropinone reductase, putative, expressed|
          Length = 3159

 Score = 32.2 bits (64), Expect = 3.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1 / +2

                                       
Query: 646  CLRRETVIAAVMLINDTLCFLNKIYIF 566
            CLR  T +A +      +CFLNK+YI+
Sbjct: 2813 CLRPPTSLARLYASMGAVCFLNKLYIY 2893



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>LOC_Os12g44070:12012.t04073:unspliced-genomic nitrate and chloride transporter, putative, expressed|
          Length = 2084

 Score = 29.0 bits (57), Expect(2) = 4.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3 / +3

                                   
Query: 123 GLHHPPQQALAHRRRQGPLRRHVV 194
           G HHPP++A  H RR    RR  V
Sbjct: 894 GRHHPPEEAPLHPRRVRRQRRRRV 965



 Score = 23.5 bits (45), Expect(2) = 4.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1 / +2

                       
Query: 514  CCCDHHRQSSW 546
            CCC   R S+W
Sbjct: 1226 CCCSRRRCSAW 1258



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>LOC_Os01g27170:12001.t02421:unspliced-genomic potassium transporter 3, putative, expressed|
          Length = 5286

 Score = 31.8 bits (63), Expect = 5.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1 / +2

                                             
Query: 493  GNASASMCCCDHHRQSSWVL*EILRKYISCSRS 591
            G A+  MCCC   R ++W      R+  +C+R+
Sbjct: 1961 GGATTGMCCCWRTRAAAWCTAT*ARRRCTCTRA 2059



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>LOC_Os04g42860:12004.t03832:unspliced-genomic anther-specific proline-rich protein APG, putative, expressed|
          Length = 3743

 Score = 28.1 bits (55), Expect(2) = 6.0
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3 / -2

                              
Query: 126  LHHPPQQALAHRRRQGPL 179
            LHH P++ LA  RRQ PL
Sbjct: 1165 LHHLPRRVLADERRQIPL 1112



 Score = 24.9 bits (48), Expect(2) = 6.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1 / -3

                                 
Query: 502 SASMCCCDHHRQSSWVL*EILR 567
           ++  CCC    Q  W+L   LR
Sbjct: 162 ASCFCCCTPQMQGGWMLNAALR 97



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>LOC_Os07g18130:12007.t01672:unspliced-genomic hypothetical protein|
          Length = 4766

 Score = 31.3 bits (62), Expect = 7.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3 / +2

                                     
Query: 123  GLHHPPQQALAHRRRQGPLRRHVVL 197
            G HH P  +L HRRR G    H +L
Sbjct: 2432 GWHHEPTCSLCHRRRDGVSSEHQLL 2506



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>LOC_Os03g60340:12003.t05272:unspliced-genomic expressed protein|
          Length = 3720

 Score = 31.3 bits (62), Expect = 7.1
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3 / -3

                                              
Query: 126  LHHPPQQALAHRRRQGPLRRHVVLDFLQG*AGRR 227
            LHHPP +A A RRR G   R  ++  L   AG R
Sbjct: 3016 LHHPPARAPAVRRRVGRAHRRRLVVALAAGAGVR 2915



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>LOC_Os01g16146:12001.t01465:unspliced-genomic phenazine biosynthesis protein, putative, expressed|
          Length = 2849

 Score = 31.3 bits (62), Expect = 7.1
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3 / +2

                                 
Query: 126 LHHPPQQALAHRRRQGPLRRHV 191
           LHH P++A A RRR G +R  V
Sbjct: 566 LHHRPREAAARRRRHGRVRDEV 631



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>LOC_Os12g33280:12012.t03020:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 5064

 Score = 31.3 bits (62), Expect = 7.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1 / -3

                                                   
Query: 547  PMMTVCGDHNNTY*PKHFPPQQASNKISLGAKQINTFKQ 431
            P M +C + N        PP+QA++  SLG +  N  K+
Sbjct: 4324 PQMVICPEPNERQYCTRIPPKQANDTTSLGKRAQNISKR 4208



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>LOC_Os08g32950:12008.t03038:unspliced-genomic hypothetical protein|
          Length = 2029

 Score = 31.3 bits (62), Expect = 7.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2 / +1

                                                       
Query: 536  SHHGFFKKSSENIYLVQEAQCVVDEHYRCYNSFSSQAWLSESL 664
            SH+  FK SS + YLV   +C    +Y  +N   S+  +S S+
Sbjct: 1309 SHYFHFKWSSYDYYLVLNQRCSDFSYYLYFNKVDSRYTISPSV 1437



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>LOC_Os08g12800:12008.t01158:unspliced-genomic glucan endo-1,3-beta-glucosidase 6 precursor, putative, expressed|
          Length = 4912

 Score = 31.3 bits (62), Expect = 7.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2 / -3

                                  
Query: 188 CGFGFSTGLSRTALCSWVCVILG 256
           CG    +G+ +  L  WVC+ILG
Sbjct: 470 CGVNLGSGIGQKRLGEWVCLILG 402



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>LOC_Os12g05550:12012.t00443:unspliced-genomic sialyltransferase-like protein, putative, expressed|
          Length = 1579

 Score = 24.4 bits (47), Expect(2) = 9.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3 / +1

                                 
Query: 132 HPPQQALAHRRRQGPLRRHVVL 197
           HPPQQ    R R+G  R+ + L
Sbjct: 700 HPPQQRARRRVRRGRRRQDLPL 765



 Score = 23.5 bits (45), Expect(2) = 9.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1 / +1

                                 
Query: 25  RHRGNPDDATPDLGEGELERTA 90
           R RG P    PDL  G  +R A
Sbjct: 589 RPRGGPRPPVPDLRRGREQRRA 654



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>LOC_Os11g06730:12011.t00565:unspliced-genomic ECA1 protein, putative, expressed|
          Length = 577

 Score = 30.9 bits (61), Expect = 9.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3 / -2

                                    
Query: 111 HDLQGLHHPPQQALAHRRRQGPLRR 185
           H    LHHPP  + + RRR+ P+ R
Sbjct: 240 HRAPALHHPPSPSSSLRRRRHPVER 166



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>LOC_Os07g47370:12007.t04373:unspliced-genomic pentatricopeptide repeat protein PPR1106-17, putative, expressed|
          Length = 2282

 Score = 30.9 bits (61), Expect = 9.8
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = +3 / +2

                                         
Query: 111  HDLQGLHHPPQQALAHRRRQGPLRRHVVL 197
            H L G H   +QA   RRR  PLRRH  L
Sbjct: 1508 HRLDGDHLGERQARELRRRHEPLRRHGAL 1594



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>LOC_Os04g38990:12004.t03469:unspliced-genomic hypothetical protein|
          Length = 1953

 Score = 30.9 bits (61), Expect = 9.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3 / -1

                                 
Query: 123 GLHHPPQQALAHRRRQGPLRRH 188
           G+HHPP+ A+    R+   RRH
Sbjct: 423 GVHHPPEAAVGRHHRRHGRRRH 358



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>LOC_Os02g29400:12002.t02634:unspliced-genomic mitochondrial import receptor subunit TOM22 homolog 2, putative,|
           expressed
          Length = 670

 Score = 30.9 bits (61), Expect = 9.8
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3 / -2

                                
Query: 126 LHHPPQQALAHRRRQGPLRRH 188
           L   PQQ L H RR  P+RRH
Sbjct: 189 LPRAPQQLLRHGRRLAPMRRH 127



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>LOC_Os11g10280:12011.t00920:unspliced-genomic receptor-like protein kinase, putative|
          Length = 2472

 Score = 30.9 bits (61), Expect = 9.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1 / -3

                                                     
Query: 460  PN*FCCWLAAVGNASASMCCCDHHRQSSWVL*EILRKYISC 582
            P+  C WLA   N + + C C     SS+++* +   Y SC
Sbjct: 2269 PHEVC*WLAQENNQNDNGCLCMRRINSSFLI*FLAVPYQSC 2147



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>LOC_Os04g49860:12004.t04500:unspliced-genomic EMB2411, putative, expressed|
          Length = 10200

 Score = 30.9 bits (61), Expect = 9.8
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2 / +2

                                
Query: 362  IVLHVSTRVSANKSTTICHF 421
            I+LHV T++  N ST +CHF
Sbjct: 1079 ILLHVRTKLPKN*STKLCHF 1138



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>LOC_Os03g61820:12003.t05412:unspliced-genomic flap endonuclease 1b, putative, expressed|
          Length = 5527

 Score = 30.9 bits (61), Expect = 9.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1 / +1

                                   
Query: 145 KRWHTVAGKGLCAVMWFWIFYRAK 216
           ++  TVA  G CAV W W+  R K
Sbjct: 544 EQMQTVANGGDCAVSWSWVLIRIK 615


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 233,967,816
Number of extensions: 3276212
Number of successful extensions: 15069
Number of sequences better than 10.0: 22
Length of query: 229
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 180
Effective length of database: 52,856,264
Effective search space: 9514127520
Effective search space used: 9514127520
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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