>LOC_Os05g03150:12005.t00212:unspliced-genomic expressed protein|
Length = 2772
Score = 71.6 bits (150), Expect(3) = 1e-19
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +3 / +2
Query: 111 HDLQGLHHPPQQALAHRRRQGPLRRHVV 194
HD+QG+HHPPQQALAHRRRQGPLRRHVV
Sbjct: 107 HDVQGVHHPPQQALAHRRRQGPLRRHVV 190
Score = 39.6 bits (80), Expect(3) = 1e-19
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +2
Query: 193 FWIFYRAKQDGAVLL 237
FW+FYRAKQDGAVLL
Sbjct: 1505 FWVFYRAKQDGAVLL 1549
Score = 29.0 bits (57), Expect(3) = 1e-19
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 242 CVILGMAMMITLMV 283
CVILGM MMIT MV
Sbjct: 1630 CVILGMVMMITHMV 1671
Score = 59.3 bits (123), Expect(3) = 4e-14
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -3 / -3
Query: 191 HMTAQRPLPATVCQRLLWGMV*PL 120
HMTAQRPLPATVCQRLLWGMV PL
Sbjct: 187 HMTAQRPLPATVCQRLLWGMVYPL 116
Score = 35.9 bits (72), Expect(3) = 4e-14
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 237 QEHSAVLLSPVENPKP 190
QE+S VLLSPVENPKP
Sbjct: 1549 QENSTVLLSPVENPKP 1502
Score = 26.3 bits (51), Expect(3) = 4e-14
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 273 VIIMAIPRMTH 241
VIIM IPRMTH
Sbjct: 1661 VIIMTIPRMTH 1629
Score = 59.7 bits (124), Expect(2) = 1e-12
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 133 IPHNKRWHTVAGKGLCAVMWF 195
IPHNKRWHTVAGKGLCAVMW+
Sbjct: 129 IPHNKRWHTVAGKGLCAVMWY 191
Score = 36.8 bits (74), Expect(2) = 1e-12
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 191 GFGFSTGLSRTALCSW 238
GFGFSTGLSRT L SW
Sbjct: 1503 GFGFSTGLSRTVLFSW 1550
Score = 32.2 bits (64), Expect(2) = 0.042
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3 / -1
Query: 242 IPKSTAPSCLAL*KIQN 192
I K TAPSCLAL*K QN
Sbjct: 1554 ITKRTAPSCLAL*KTQN 1504
Score = 24.0 bits (46), Expect(2) = 0.042
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -3
Query: 275 E*SSWPSQG*RIP 237
E*SS PSQG*R+P
Sbjct: 1663 E*SS*PSQG*RMP 1625
Score = 30.9 bits (61), Expect = 9.8
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / +1
Query: 192 VLDFLQG*AGRRCALG 239
VL FLQG*AGR C+LG
Sbjct: 1504 VLGFLQG*AGRCCSLG 1551
>LOC_Os06g50970:12006.t04781:unspliced-genomic expressed protein|
Length = 2362
Score = 61.1 bits (127), Expect(3) = 1e-16
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 133 IPHNKRWHTVAGKGLCAVMWF 195
IPHNKRWHTVAGKGLCAVMWF
Sbjct: 68 IPHNKRWHTVAGKGLCAVMWF 130
Score = 39.6 bits (80), Expect(3) = 1e-16
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +3
Query: 193 FWIFYRAKQDGAVLL 237
FW+FYRAKQDGAVLL
Sbjct: 969 FWVFYRAKQDGAVLL 1013
Score = 29.0 bits (57), Expect(3) = 1e-16
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / +2
Query: 239 VCVILGMAMMITLMV 283
VCVILGM MM LMV
Sbjct: 1091 VCVILGMVMMTILMV 1135
Score = 50.6 bits (104), Expect(3) = 4e-11
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -3 / -2
Query: 194 NHMTAQRPLPATVCQRLLWGMV 129
NHMTAQRPLPATVC RLL GMV
Sbjct: 129 NHMTAQRPLPATVCHRLLCGMV 64
Score = 35.4 bits (71), Expect(3) = 4e-11
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 237 QEHSAVLLSPVENPKP 190
QE+S +LLSPVENPKP
Sbjct: 1013 QENSTILLSPVENPKP 966
Score = 24.4 bits (47), Expect(3) = 4e-11
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1 / -2
Query: 499 HFPPQQASNKISLGAKQINTFKQHRD 422
H PP + S K L +N+ KQH +
Sbjct: 2064 HIPPLKLSQKQILNQFALNS*KQHEN 1987
Score = 54.7 bits (113), Expect(2) = 1e-10
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3 / +1
Query: 126 LHHPPQQALAHRRRQGPLRRHVV 194
+HHP QQA+AHRRRQGPLRRHVV
Sbjct: 61 VHHPAQQAVAHRRRQGPLRRHVV 129
Score = 34.5 bits (69), Expect(2) = 1e-10
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 191 GFGFSTGLSRTALCSWVCVI 250
GFGFSTGLSR L SW I
Sbjct: 967 GFGFSTGLSRMVLFSWYYAI 1026
Score = 33.6 bits (67), Expect = 1.5
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 263 WPSQG*RIPKSTAPSCLAL*KIQN 192
W * K TAPSCLAL*K QN
Sbjct: 1039 WSKSK*HSTKRTAPSCLAL*KTQN 968
>LOC_Os12g44070:12012.t04073:unspliced-genomic nitrate and chloride transporter, putative, expressed|
Length = 2084
Score = 29.0 bits (57), Expect(2) = 4.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3 / +3
Query: 123 GLHHPPQQALAHRRRQGPLRRHVV 194
G HHPP++A H RR RR V
Sbjct: 894 GRHHPPEEAPLHPRRVRRQRRRRV 965
Score = 23.5 bits (45), Expect(2) = 4.9
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +1 / +2
Query: 514 CCCDHHRQSSW 546
CCC R S+W
Sbjct: 1226 CCCSRRRCSAW 1258
>LOC_Os04g42860:12004.t03832:unspliced-genomic anther-specific proline-rich protein APG, putative, expressed|
Length = 3743
Score = 28.1 bits (55), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / -2
Query: 126 LHHPPQQALAHRRRQGPL 179
LHH P++ LA RRQ PL
Sbjct: 1165 LHHLPRRVLADERRQIPL 1112
Score = 24.9 bits (48), Expect(2) = 6.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1 / -3
Query: 502 SASMCCCDHHRQSSWVL*EILR 567
++ CCC Q W+L LR
Sbjct: 162 ASCFCCCTPQMQGGWMLNAALR 97
>LOC_Os12g05550:12012.t00443:unspliced-genomic sialyltransferase-like protein, putative, expressed|
Length = 1579
Score = 24.4 bits (47), Expect(2) = 9.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3 / +1
Query: 132 HPPQQALAHRRRQGPLRRHVVL 197
HPPQQ R R+G R+ + L
Sbjct: 700 HPPQQRARRRVRRGRRRQDLPL 765
Score = 23.5 bits (45), Expect(2) = 9.2
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1 / +1
Query: 25 RHRGNPDDATPDLGEGELERTA 90
R RG P PDL G +R A
Sbjct: 589 RPRGGPRPPVPDLRRGREQRRA 654
>LOC_Os03g61820:12003.t05412:unspliced-genomic flap endonuclease 1b, putative, expressed|
Length = 5527
Score = 30.9 bits (61), Expect = 9.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1 / +1
Query: 145 KRWHTVAGKGLCAVMWFWIFYRAK 216
++ TVA G CAV W W+ R K
Sbjct: 544 EQMQTVANGGDCAVSWSWVLIRIK 615
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 233,967,816
Number of extensions: 3276212
Number of successful extensions: 15069
Number of sequences better than 10.0: 22
Length of query: 229
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 180
Effective length of database: 52,856,264
Effective search space: 9514127520
Effective search space used: 9514127520
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)