Clone Name | FLbaf97c20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Q9CPU2:NDUB2_MOUSE NADH dehydrogenase [ubiquinone] 1 beta subcom... | 32 | 3.0 | 2 | O60182:RFC1_SCHPO Replication factor C subunit 1 - Schizosacchar... | 31 | 3.9 |
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>Q9CPU2:NDUB2_MOUSE NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2,| mitochondrial precursor - Mus musculus (Mouse) Length = 105 Score = 31.6 bits (70), Expect = 3.0 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +1 Query: 136 PHNKRWHTVAGKGLCAVMWFWIFYRAKQDGAVLLG 240 P R + G+ L ++MWFWI +R D +LG Sbjct: 48 PQLTRSQVIQGEFLSSLMWFWILWRFWHDSDAVLG 82
>O60182:RFC1_SCHPO Replication factor C subunit 1 - Schizosaccharomyces pombe (Fission| yeast) Length = 934 Score = 31.2 bits (69), Expect = 3.9 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +2 Query: 362 IVLHVSTRVSANKSTTICHFIPVLFES--VNLFSTQTDFVAGLL 487 I +H+ +VSANK H+IP+L+ES V L + +D V ++ Sbjct: 753 IQVHMRLKVSANKLDLRQHYIPILYESLPVKLSTGHSDVVPEII 796 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 94,460,218 Number of extensions: 1615512 Number of successful extensions: 3323 Number of sequences better than 10.0: 2 Number of HSP's gapped: 3323 Number of HSP's successfully gapped: 2 Length of query: 229 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 120 Effective length of database: 70,788,284 Effective search space: 8494594080 Effective search space used: 8494594080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)