ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf99i17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK062649:Os09g0413100 | 246 | 4e-65 | 2 | AK099060:Os01g0139200 | 30 | 4.7 | 3 | AK098894:Os01g0139200 | 30 | 4.7 | 4 | AK098852:Os01g0139200 | 30 | 4.7 | 5 | AK070687:Os01g0139200 | 30 | 4.7 | 6 | AK065080:Os01g0139200 | 30 | 4.7 | 7 | AK110775:Os12g0621300 | 30 | 6.2 | 8 | AK065486:Os05g0502800 | 29 | 8.1 | 9 | AK064242:Os05g0502800 | 29 | 8.1 |
|---|
>AK062649:Os09g0413100 | Length = 159 Score = 246 bits (627), Expect = 4e-65 Identities = 119/155 (76%), Positives = 134/155 (86%) Frame = +1 Query: 835 MEGNSWLSSKGKTNLKKVHDEAQDAAEKQKGKVTVTFDLVGRKVILNKDETAESESDQGI 1014 MEGNSWLSSK K++LKK H EAQ+AAEK KGKV VTFDLVGRKVILNKD ES+ I Sbjct: 1 MEGNSWLSSKEKSDLKKQHGEAQEAAEKDKGKVVVTFDLVGRKVILNKDGATVLESEHRI 60 Query: 1015 MRPLEQKHQVQRIQPSPSIREQPVFIETGPVKPRTDRVKQSKKLGKNGLCLEVTGRVQHD 1194 + P E+K Q+ RIQ +P+IREQPVFIETGPVKP+TDR +QSK+L KNGLCLEVTGR+QHD Sbjct: 61 LGPPEEKDQIHRIQANPTIREQPVFIETGPVKPKTDRARQSKRLTKNGLCLEVTGRLQHD 120 Query: 1195 DKDPQSFLAGKMKKGDHLAYSSFGQVREGDDYECS 1299 DKDPQSFL GKMKKGDHLAYSSFGQ REGDD++CS Sbjct: 121 DKDPQSFLGGKMKKGDHLAYSSFGQPREGDDFDCS 155
>AK099060:Os01g0139200 | Length = 697 Score = 30.0 bits (66), Expect = 4.7 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = -3 Query: 844 FLPFQNSHFGHH--TL*FLP-QSFCHS---QQASLHKLQLQLLCPKEELQHHLNPHMYYL 683 ++ QN HF H+ T F+P QS+ H QQA + + P++ N MYY+ Sbjct: 497 YVTAQNQHFIHNPATGTFIPIQSYYHHPVPQQAPQPPMPQPVPQPQQSHAFDPNTGMYYI 556 Query: 682 PSRQVSHRNYMVP 644 P R + + Y +P Sbjct: 557 PMRTNAPQAYSMP 569
>AK098894:Os01g0139200 | Length = 696 Score = 30.0 bits (66), Expect = 4.7 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = -3 Query: 844 FLPFQNSHFGHH--TL*FLP-QSFCHS---QQASLHKLQLQLLCPKEELQHHLNPHMYYL 683 ++ QN HF H+ T F+P QS+ H QQA + + P++ N MYY+ Sbjct: 496 YVTAQNQHFIHNPATGTFIPIQSYYHHPVPQQAPQPPMPQPVPQPQQSHAFDPNTGMYYI 555 Query: 682 PSRQVSHRNYMVP 644 P R + + Y +P Sbjct: 556 PMRTNAPQAYSMP 568
>AK098852:Os01g0139200 | Length = 697 Score = 30.0 bits (66), Expect = 4.7 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = -3 Query: 844 FLPFQNSHFGHH--TL*FLP-QSFCHS---QQASLHKLQLQLLCPKEELQHHLNPHMYYL 683 ++ QN HF H+ T F+P QS+ H QQA + + P++ N MYY+ Sbjct: 497 YVTAQNQHFIHNPATGTFIPIQSYYHHPVPQQAPQPPMPQPVPQPQQSHAFDPNTGMYYI 556 Query: 682 PSRQVSHRNYMVP 644 P R + + Y +P Sbjct: 557 PMRTNAPQAYSMP 569
>AK070687:Os01g0139200 | Length = 356 Score = 30.0 bits (66), Expect = 4.7 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = -3 Query: 844 FLPFQNSHFGHH--TL*FLP-QSFCHS---QQASLHKLQLQLLCPKEELQHHLNPHMYYL 683 ++ QN HF H+ T F+P QS+ H QQA + + P++ N MYY+ Sbjct: 156 YVTAQNQHFIHNPATGTFIPIQSYYHHPVPQQAPQPPMPQPVPQPQQSHAFDPNTGMYYI 215 Query: 682 PSRQVSHRNYMVP 644 P R + + Y +P Sbjct: 216 PMRTNAPQAYSMP 228
>AK065080:Os01g0139200 | Length = 707 Score = 30.0 bits (66), Expect = 4.7 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = -3 Query: 844 FLPFQNSHFGHH--TL*FLP-QSFCHS---QQASLHKLQLQLLCPKEELQHHLNPHMYYL 683 ++ QN HF H+ T F+P QS+ H QQA + + P++ N MYY+ Sbjct: 507 YVTAQNQHFIHNPATGTFIPIQSYYHHPVPQQAPQPPMPQPVPQPQQSHAFDPNTGMYYI 566 Query: 682 PSRQVSHRNYMVP 644 P R + + Y +P Sbjct: 567 PMRTNAPQAYSMP 579
>AK110775:Os12g0621300 | Length = 267 Score = 29.6 bits (65), Expect = 6.2 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Frame = +1 Query: 1012 IMRPLEQKHQVQRIQPSPSIREQPVFIETGPVKPRTDRVKQSKKLGKN--GLCLEVTGRV 1185 + RP+ KHQ + + P +++ + + G +PR +R+K S + G+N C E G Sbjct: 198 VFRPIIGKHQWEFVDPGFKLQKPRLRRKRG--RPRKNRIKASDESGQNTKHKCKE-CGGF 254 Query: 1186 QHDDKDPQ 1209 H DK+ Q Sbjct: 255 GHRDKNCQ 262
>AK065486:Os05g0502800 | Length = 681 Score = 29.3 bits (64), Expect = 8.1 Identities = 50/235 (21%), Positives = 91/235 (38%), Gaps = 34/235 (14%) Frame = +1 Query: 616 GKIVCEQEGEGPCSFCGSL-VLMEGSTYAG---------------LSDVGVPLSDTEVAA 747 G + EQ G SF G L V ME T +G + D+ V +E+ Sbjct: 75 GNALPEQSG---ASFDGELDVEMEPKTGSGGLVPQLVQDQHPASDIGDLAVREDGSEIMV 131 Query: 748 EAYAKRL-VDYDRNSAARTKVYD---------DQSDYFEMEGNSWLSSKGKTNLKKVHD- 894 + + VD D N+ + V + D+SD E E + SS+ ++ + D Sbjct: 132 DVERSTVPVDADMNNVSLALVKEEAEGGGDREDKSDEEESESSKEESSEASSSSDEEEDK 191 Query: 895 ----EAQDAAEKQKGKVTVTFDLVGRKVILNKDE---TAESESDQGIMRPLEQKHQVQRI 1053 EA ++++++ T + + E ++ + ++ P++ KH+V+ + Sbjct: 192 RESSEASSSSDEEEQMAKKTGGAGDTDSLFEEGELMLASDDDDEEAPKGPIKSKHEVEVL 251 Query: 1054 QPSPSIREQPVFIETGPVKPRTDRVKQSKKLGKNGLCLEVTGRVQHDDKDPQSFL 1218 P P I Q ++P + G + V G VQH+ + S L Sbjct: 252 PPVPKIDVQ--------LEPHHQTLPVGTISAIMGERVIVEGSVQHNPLNEGSIL 298
>AK064242:Os05g0502800 | Length = 681 Score = 29.3 bits (64), Expect = 8.1 Identities = 50/235 (21%), Positives = 91/235 (38%), Gaps = 34/235 (14%) Frame = +1 Query: 616 GKIVCEQEGEGPCSFCGSL-VLMEGSTYAG---------------LSDVGVPLSDTEVAA 747 G + EQ G SF G L V ME T +G + D+ V +E+ Sbjct: 75 GNALPEQSG---ASFDGELDVEMEPKTGSGGLVPQLVQDQHPASDIGDLAVREDGSEIMV 131 Query: 748 EAYAKRL-VDYDRNSAARTKVYD---------DQSDYFEMEGNSWLSSKGKTNLKKVHD- 894 + + VD D N+ + V + D+SD E E + SS+ ++ + D Sbjct: 132 DVERSTVPVDADMNNVSLALVKEEAEGGGDREDKSDEEESESSKEESSEASSSSDEEEDK 191 Query: 895 ----EAQDAAEKQKGKVTVTFDLVGRKVILNKDE---TAESESDQGIMRPLEQKHQVQRI 1053 EA ++++++ T + + E ++ + ++ P++ KH+V+ + Sbjct: 192 RESSEASSSSDEEEQMAKKTGGAGDTDSLFEEGELMLASDDDDEEAPKGPIKSKHEVEVL 251 Query: 1054 QPSPSIREQPVFIETGPVKPRTDRVKQSKKLGKNGLCLEVTGRVQHDDKDPQSFL 1218 P P I Q ++P + G + V G VQH+ + S L Sbjct: 252 PPVPKIDVQ--------LEPHHQTLPVGTISAIMGERVIVEGSVQHNPLNEGSIL 298 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.315 0.133 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 41,735,316 Number of extensions: 928262 Number of successful extensions: 2727 Number of sequences better than 10.0: 9 Number of HSP's gapped: 2727 Number of HSP's successfully gapped: 9 Length of query: 523 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 418 Effective length of database: 11,195,550 Effective search space: 4679739900 Effective search space used: 4679739900 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
