ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf99i17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9QXN3:TRIP4_MOUSE Activating signal cointegrator 1 - Mus muscul... 114 1e-24
2Q15650:TRIP4_HUMAN Activating signal cointegrator 1 - Homo sapie... 111 1e-23
3O13855:YEX1_SCHPO Uncharacterized protein C1A6.01c - Schizosacch... 72 5e-12
4P36119:YK03_YEAST Uncharacterized protein YKR023W - Saccharomyce... 47 3e-04
5Q7RTT6:SSX6_HUMAN Protein SSX6 - Homo sapiens (Human) 37 0.30
6Q9W3C0:UTP11_DROME Probable U3 small nucleolar RNA-associated pr... 35 1.1
7P18330:SYI1_PSEFL Isoleucyl-tRNA synthetase 1 - Pseudomonas fluo... 35 1.1
8P32609:PEP7_YEAST Vacuolar segregation protein PEP7 - Saccharomy... 34 1.9
9Q9H3R0:JHD3C_HUMAN JmjC domain-containing histone demethylation ... 34 1.9
10Q46DW1:Y959_METBF UPF0095 protein Mbar_A0959 - Methanosarcina ba... 33 3.3
11O88271:CFDP1_MOUSE Craniofacial development protein 1 - Mus musc... 33 3.3
12P75454:TIG_MYCPN Trigger factor - Mycoplasma pneumoniae 32 5.6
13Q38874:STM_ARATH Homeobox protein SHOOT MERISTEMLESS - Arabidops... 32 7.4
14Q00799:RBP2_PLAVB Reticulocyte-binding protein 2 precursor - Pla... 32 7.4
15Q07844:RIX7_YEAST Ribosome biogenesis ATPase RIX7 - Saccharomyce... 32 9.6
16Q75UQ2:CFDP1_RAT Craniofacial development protein 1 - Rattus nor... 32 9.6

>Q9QXN3:TRIP4_MOUSE Activating signal cointegrator 1 - Mus musculus (Mouse)|
          Length = 581
 Score =  114 bits (284), Expect = 1e-24
 Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 31/178 (17%)
 Frame = +1

Query: 562  PCSCQARLHNLVSNCLSCGKIVCEQEGEGPCSFCGSLV---------------------- 675
            PC C  + H L++NCL CG+IVCEQEG GPC FCGSLV                      
Sbjct: 170  PCDCLGQKHKLINNCLVCGRIVCEQEGSGPCLFCGSLVCTNEEQDILQRDSNKSQKLLKK 229

Query: 676  LMEGSTYAGLSDVG----VPLSDTEV-----AAEAYAKRLVDYDRNSAARTKVYDDQSDY 828
            LM G+  +G  DV     +P  ++ +      A  + ++L+++DR S  RT+V DD+SDY
Sbjct: 230  LMSGAETSGKVDVSTKDLLPHQESRMKSGLEKAIKHKEKLLEFDRTSIRRTQVIDDESDY 289

Query: 829  FEMEGNSWLSSKGKTNLKKVHDEAQDAAEKQKGKVTVTFDLVGRKVILNKDETAESES 1002
            F  + N WLS   +  L+K  +E ++     +    VT D  GRK++ +++  AE  S
Sbjct: 290  FASDSNQWLSKVEREMLQKREEELRELRHASRLSKKVTIDFAGRKILEDENPLAEYHS 347



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>Q15650:TRIP4_HUMAN Activating signal cointegrator 1 - Homo sapiens (Human)|
          Length = 581

 Score =  111 bits (277), Expect = 1e-23
 Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 31/178 (17%)
 Frame = +1

Query: 562  PCSCQARLHNLVSNCLSCGKIVCEQEGEGPCSFCGSLV---------------------- 675
            PC C  + H L++NCL CG+IVCEQEG GPC FCG+LV                      
Sbjct: 170  PCDCLGQKHKLINNCLICGRIVCEQEGSGPCLFCGTLVCTHEEQDILQRDSNKSQKLLKK 229

Query: 676  LMEGSTYAGLSDVG----VPLSDTEV-----AAEAYAKRLVDYDRNSAARTKVYDDQSDY 828
            LM G   +G  D+     +P  +  +      A  +  +L+++DR S  RT+V DD+SDY
Sbjct: 230  LMSGVENSGKVDISTKDLLPHQELRIKSGLEKAIKHKDKLLEFDRTSIRRTQVIDDESDY 289

Query: 829  FEMEGNSWLSSKGKTNLKKVHDEAQDAAEKQKGKVTVTFDLVGRKVILNKDETAESES 1002
            F  + N WLS   +  L+K  +E ++     +    VT D  GRK++  ++  AE  S
Sbjct: 290  FASDSNQWLSKLERETLQKREEELRELRHASRLSKKVTIDFAGRKILEEENSLAEYHS 347



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>O13855:YEX1_SCHPO Uncharacterized protein C1A6.01c - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 455

 Score = 72.4 bits (176), Expect = 5e-12
 Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
 Frame = +1

Query: 565  CSCQARLHNL---VSNCLSCGKIVCEQEGEGPCSFCGSLVLM-------------EGSTY 696
            C+CQ R H L     NCL+CGKI+C  EG GPC+FC + V+              EGS  
Sbjct: 195  CNCQGRKHPLNEAAPNCLNCGKIICIVEGIGPCTFCDNPVISKAQQLELIQELKHEGSRL 254

Query: 697  ------------------------AGLSDVGVPLSDTEVAAEAYAKR---LVDYDRNSAA 795
                                    + L  + +     E  A+   +R   L+++DR SA 
Sbjct: 255  KQAANQKRKSKTVSSKNNFQRLQNSSLHSIFLDPKQLEQKAQEAEERKNVLLNFDRTSAQ 314

Query: 796  RTKVYDDQSDY--FEMEGNSWLSSKGKTNLKKVHDEAQDAAEKQKGKVTVTFDLVGRKVI 969
            RT++ D+ +D+    +  ++W S   K  L  V  +   A +++K K  ++  L G+KV+
Sbjct: 315  RTRIIDEAADFDPTSLASDTWASPAEKA-LNLVRMQKAMAKKEKKKKKVLSISLSGKKVV 373

Query: 970  LNKDETAESESDQ 1008
            +++ E +   SD+
Sbjct: 374  VDQKEASSESSDE 386



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>P36119:YK03_YEAST Uncharacterized protein YKR023W - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 530

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 44/237 (18%), Positives = 87/237 (36%), Gaps = 20/237 (8%)
 Frame = +1

Query: 274 YLQRRGYTDPSKGAGSSQSSNLQPYLKPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 453
           Y+ ++G   P K     +SS  +P ++PS                               
Sbjct: 103 YINKKGDEKPKKLKDEKKSSTTRPTVQPSNQST--------------------------- 135

Query: 454 XXETHVVSKRGPKKKGGKVISLAEAAKGSIVFK-----QGKPCSCQARLH---NLVSNCL 609
             +++ + ++   +  GK+ SL E  +   + +       K C+CQ   H   ++  NCL
Sbjct: 136 --QSNPIKEKKEHRSKGKLQSLQEIDEAIKMLELRDSGSSKNCNCQGTRHPVFDIAPNCL 193

Query: 610 SCGKIVCEQEG--EGPCSFCGSLVLMEGSTYA----------GLSDVGVPLSDTEVAAEA 753
            CGK+VC  EG  +G C  C   ++ +                L+     LS+    A  
Sbjct: 194 HCGKVVCVIEGLNKGKCGHCHEQLISDNERTQMVEILNQEKNELNGSSSSLSNASNGANV 253

Query: 754 YAKRLVDYDRNSAARTKVYDDQSDYFEMEGNSWLSSKGKTNLKKVHDEAQDAAEKQK 924
             K+   Y   S     ++ +Q   F+         + +  + K+ +E +++  K++
Sbjct: 254 PKKKTKTYKITSGMGKNLFAEQDKLFDFIERKRERERKRNEVLKLQEEKEESEAKER 310



 Score = 33.1 bits (74), Expect = 3.3
 Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 35/170 (20%)
 Frame = +1

Query: 739  VAAEAYAKRLVDYDRNSAARTKVYDDQSDY-FEMEGNSWLSS--------KGKTNLK--- 882
            +AA+    RL+ +   SA RTK+ D+ SD+    E   W S+        K + NL+   
Sbjct: 326  LAAQERLDRLLYFQDTSAERTKIIDNASDFDMNQEVGLWGSARERALALKKQQRNLRKWE 385

Query: 883  KVHDEAQDAAEK--------QKGKVTVT-FDLVGRKVILNKDETAESESDQGIMRPLEQK 1035
            KV  E     EK          GKVT+T        VI   D+     SD+  +  L+  
Sbjct: 386  KVEKERNGRREKYVVSMNIGSNGKVTMTEVPKDTENVIAGSDDDISDISDEEDISDLKHI 445

Query: 1036 HQVQ-RIQPSPSI-------------REQPVFIETGPVKPRTDRVKQSKK 1143
            H ++  I  + S+             R++  F     VK  +D  +Q++K
Sbjct: 446  HALKSEINTTKSLENLHLQSKAWDYERDKKQFDRPTYVKKNSDTAQQNRK 495



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>Q7RTT6:SSX6_HUMAN Protein SSX6 - Homo sapiens (Human)|
          Length = 188

 Score = 36.6 bits (83), Expect = 0.30
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
 Frame = +1

Query: 748  EAYAKRLVDYDRNSAARTKVYDDQSDYFEMEGNSWLSSKGKTNLKKVHDEAQDAAEKQKG 927
            +A+AKR  D  + S  R+K +DD + YF  E   W   K    +  VH + +  A  + G
Sbjct: 5    DAFAKRPRDDAKASEKRSKAFDDIAKYFSKE--EWEKMKFSEKISCVHMKRKYEAMTKLG 62

Query: 928  KVTVTFDLVGRKVILNKDETAESESDQG----IMRPLEQKHQVQRIQP 1059
               VT  L  R       +  +S++D+     + RP     ++QRI P
Sbjct: 63   -FNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIP 109



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>Q9W3C0:UTP11_DROME Probable U3 small nucleolar RNA-associated protein 11 - Drosophila|
            melanogaster (Fruit fly)
          Length = 237

 Score = 34.7 bits (78), Expect = 1.1
 Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
 Frame = +1

Query: 766  LVDYDR-NSAARTKVYDDQSDYFEMEGNSWLSSKGKTNLKKVHDEAQDAAEKQKGKVTVT 942
            LVD D    AA  ++  D+  Y E++   WL           HD+ ++  EK+K   T  
Sbjct: 122  LVDVDAIKGAANKRIKFDEDGYMELDMGEWLLK---------HDDEEEEEEKKKKSKTTE 172

Query: 943  FDLVGRKVILNKDETAESESDQGIMRPLEQKHQVQRIQPSPSIREQPVFIETGPVKPRT 1119
             + + ++ I    +  + E + GI++        Q+IQ   +++ QP  ++   +KP T
Sbjct: 173  PNPIKQQRINELKKREQRERELGIVQ--------QKIQLKNTLK-QPRLLKPRKIKPGT 222



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>P18330:SYI1_PSEFL Isoleucyl-tRNA synthetase 1 - Pseudomonas fluorescens|
          Length = 943

 Score = 34.7 bits (78), Expect = 1.1
 Identities = 26/89 (29%), Positives = 37/89 (41%)
 Frame = +1

Query: 490 KKKGGKVISLAEAAKGSIVFKQGKPCSCQARLHNLVSNCLSCGKIVCEQEGEGPCSFCGS 669
           K + G++ +LAE  KG  VFK  KP          V+ C  CG  + E E E       +
Sbjct: 157 KNEAGEIRALAEIVKGGFVFKGLKP----------VNWCFDCGSALAEAEVEYEDKKSST 206

Query: 670 LVLMEGSTYAGLSDVGVPLSDTEVAAEAY 756
           +            DV  P++D    AEA+
Sbjct: 207 I------------DVAFPIADDAKLAEAF 223



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>P32609:PEP7_YEAST Vacuolar segregation protein PEP7 - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 515

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
 Frame = +1

Query: 484 GPKKKGGKVISLAEAAKGSI--VFKQGKPC--SCQARLHNLVS--NCLSCGKIVCEQ 636
           G +KK   V S A+  K S    FK+GK C  +C   L+N +   NC  CGK+ C +
Sbjct: 48  GKQKKARSVDSSAQKLKRSHWEKFKKGKSCCHTCGRTLNNNIGAINCRKCGKLYCRR 104



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>Q9H3R0:JHD3C_HUMAN JmjC domain-containing histone demethylation protein 3C - Homo|
           sapiens (Human)
          Length = 1056

 Score = 33.9 bits (76), Expect = 1.9
 Identities = 20/65 (30%), Positives = 36/65 (55%)
 Frame = +1

Query: 706 SDVGVPLSDTEVAAEAYAKRLVDYDRNSAARTKVYDDQSDYFEMEGNSWLSSKGKTNLKK 885
           S+  V L +TE ++E         + +SA+R +V  + SD+ ++ GNS LS+    ++K 
Sbjct: 416 SEAAVKLRNTEASSE---------EESSASRMQVEQNLSDHIKLSGNSCLSTSVTEDIKT 466

Query: 886 VHDEA 900
             D+A
Sbjct: 467 EDDKA 471



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>Q46DW1:Y959_METBF UPF0095 protein Mbar_A0959 - Methanosarcina barkeri (strain Fusaro /|
            DSM 804)
          Length = 517

 Score = 33.1 bits (74), Expect = 3.3
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 4/139 (2%)
 Frame = +1

Query: 727  SDTEVAAEAYAKRLVDYDRNSAARTKVYDDQSDYFEMEGNSWLSSKGKTNLKKVHDEAQD 906
            S  ++ A   A R+ +   +   +      + D +E E      +KGK + K     +  
Sbjct: 291  SKRKIRAPEIAPRITEKKLHKRIKIHRVSSKPDLYEEELPEE-ETKGKASAKAFEKVSVK 349

Query: 907  AAEKQKGKVTVTFDLVGRKVILNKDETAESESDQGIM----RPLEQKHQVQRIQPSPSIR 1074
            AAEK    V  T   V  + I+ K + +  ++         +P E+     ++    ++R
Sbjct: 350  AAEKVSEMVPATAGKVKTRSIVAKPQISARKAPAAARVSREKPAEKVPSAVKVSRGEAVR 409

Query: 1075 EQPVFIETGPVKPRTDRVK 1131
              P  ++T PV P   R +
Sbjct: 410  VSPAPVKTVPVSPEATRFR 428



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>O88271:CFDP1_MOUSE Craniofacial development protein 1 - Mus musculus (Mouse)|
          Length = 295

 Score = 33.1 bits (74), Expect = 3.3
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
 Frame = +1

Query: 892  DEAQDAAEKQKGKVTVTFDLVGRKVILNKDETAESESDQGIMRPLEQKHQVQRIQPSPSI 1071
            DE     E +K K+T  FD  G +V + K+  A S+  +  ++  E              
Sbjct: 148  DELDKPRESEKVKITKVFDFAGEEVRVTKEVDAASKEAKSFLKQTE-------------- 193

Query: 1072 REQPVFIETGPVK--PRTDRVKQ----SKKLGKNGLCLEVTGRVQHDDKDPQSF 1215
            RE+P  + T P    P    +K+    S  LGK G   +    ++    D +SF
Sbjct: 194  REKPQALVTSPATPLPAGSGIKRASGMSSLLGKIGAKKQKMSTLEKSKLDWESF 247



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>P75454:TIG_MYCPN Trigger factor - Mycoplasma pneumoniae|
          Length = 444

 Score = 32.3 bits (72), Expect = 5.6
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +2

Query: 317 EARSRLTFSLI*SHLLMQQLPKQRNRHVHKKIQHLLLVRVPRVNQMRLRLMLSPREVQK 493
           EAR  +TF+L+   +   +  K  N+ +H +I+ ++ V  P VN    + M    E QK
Sbjct: 364 EARDNVTFALVMKRIADVEKIKVDNKKIHSEIESIIDVEYPFVNAELKKQMFHNMEQQK 422



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>Q38874:STM_ARATH Homeobox protein SHOOT MERISTEMLESS - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 382

 Score = 32.0 bits (71), Expect = 7.4
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -3

Query: 1297 STHSHHLHELDQRNCMRDGHLFSSCQQESSGDPCHHAAPFRLPPGTSHSFRASCSVLPC 1121
            ++H HH H+   +    DG+ + S  Q+SS       AP   P GT +   +S S   C
Sbjct: 35   TSHQHHGHDHQHQQQEHDGYAYQSHHQQSSSLFLQSLAP---PQGTKNKVASSSSPSSC 90



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>Q00799:RBP2_PLAVB Reticulocyte-binding protein 2 precursor - Plasmodium vivax (strain|
           Belem)
          Length = 2867

 Score = 32.0 bits (71), Expect = 7.4
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 799 TKVYDDQSDYFEMEGNSWLSSKGKT---NLKKVHDEAQDAAEKQKGKVTVTFD 948
           TK YDD    + +E N +   K  +   N+KK+H  A D  +K K ++  + D
Sbjct: 315 TKTYDDIVKEYAIEINDFDEKKSISFMDNMKKIHKSAIDTLKKMKAELNTSLD 367



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>Q07844:RIX7_YEAST Ribosome biogenesis ATPase RIX7 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 837

 Score = 31.6 bits (70), Expect = 9.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 1111 PRTDRVKQSKKLGKNGLCLEVTGRVQHDDKDPQSFL 1218
            P+T+ VK+SKK  K G C     +++ D   P S L
Sbjct: 169  PKTEEVKKSKKRSKEGTCKVKRQKIKEDRSPPNSSL 204



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>Q75UQ2:CFDP1_RAT Craniofacial development protein 1 - Rattus norvegicus (Rat)|
          Length = 295

 Score = 31.6 bits (70), Expect = 9.6
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +1

Query: 892  DEAQDAAEKQKGKVTVTFDLVGRKVILNKDETAESESDQGIMRPLEQK 1035
            DE +   E +K K+T  FD  G +V + K+  A S+  +  ++  E++
Sbjct: 148  DELEKPKESEKVKITKVFDFAGEEVRVTKEVDATSKEAKSFLKQTEKE 195


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.315    0.133    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 255,389,575
Number of extensions: 5456489
Number of successful extensions: 15659
Number of sequences better than 10.0: 16
Number of HSP's gapped: 15623
Number of HSP's successfully gapped: 19
Length of query: 523
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 405
Effective length of database: 68,319,629
Effective search space: 27669449745
Effective search space used: 27669449745
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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