Clone Name | FLbaf99i17 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK241710.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065197D02, full insert sequence Length = 3447 Score = 724 bits (365), Expect = 0.0 Identities = 829/983 (84%), Gaps = 3/983 (0%) Strand = Plus / Minus Query: 337 cttcagccttatttgaagccatctgctgatgcagcaactgcccaaacaaagaaacagaca 396 |||||||||||| ||||||| |||||||| || | || ||||||| ||||| |||||| Sbjct: 1789 cttcagccttatgtgaagccttctgctgaagctgggcctacccaaaccaagaagcagaca 1730 Query: 397 cgtgcacaaaaagatccagca---tcttcttctagtcagagttccaagagtcaatcagat 453 || ||||||||||| ||||| ||||||||| | ||||||||||||| |||| |||| Sbjct: 1729 cgcacacaaaaagatgcagcagcatcttcttctggccagagttccaagaatcaaccagag 1670 Query: 454 gcggctgagactcatgttgtctccaagagaggtccaaaaaagaagggaggaaaggtcatc 513 | |||| | | |||| ||||||||||||| |||||||||| | || ||||| |||| Sbjct: 1669 actactgaaccccgagttgcctccaagagaggttcaaaaaagaaagcagtaaaggccatc 1610 Query: 514 tctcttgctgaggcagcaaagggttctattgtcttcaagcaggggaaaccttgttcatgc 573 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1609 tcccttgctgaggcagcgaagggttctattgtcttcaagcaggggaaaccttgttcatgc 1550 Query: 574 caagcacgactgcacaatcttgttagcaactgcttatcatgtggaaaaattgtgtgtgaa 633 |||||||| | |||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1549 caagcacgccagcacaaccttgtcagcaactgcttatcatgtggcaaaattgtgtgtgaa 1490 Query: 634 caagagggcgagggaccatgtagtttctgtggctcacttgtcttgatggaaggtagtaca 693 |||||||| ||||||||||| ||||||||||| ||||||| | |||||||| || ||| Sbjct: 1489 caagagggtgagggaccatgcagtttctgtggtgcacttgttctaatggaaggaagcaca 1430 Query: 694 tatgcgggtttaagtgatgttggagttcctctttcggacacagaagttgcagctgaagct 753 ||||| |||||||||||||||| | ||||||||||||| |||||| || ||||||||| Sbjct: 1429 tatgctggtttaagtgatgttgaaattcctctttcggaagcagaagctgaagctgaagca 1370 Query: 754 tatgcaaagaggcttgttgactatgacagaaactctgcggcaagaactaaagtgtatgat 813 |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||| Sbjct: 1369 tatgcaaagaggcttgttgactatgacagaaactctgcagcaaggactaaagtttatgat 1310 Query: 814 gaccaaagtgactattttgaaatggaaggaaatagttggctctcatctaagggaaagaca 873 || ||||||||||| |||||||||||||||||||||||||| || || |||| |||| || Sbjct: 1309 gatcaaagtgactactttgaaatggaaggaaatagttggctttcttcaaaggaaaagtca 1250 Query: 874 aacctaaagaaggtgcatgacgaagctcaggatgcagctgaaaaacaaaaggggaaagtg 933 ||||||||||| ||| | ||||||||||| ||||||||||| | || ||||||||| Sbjct: 1249 gacctaaagaagcagcacggggaagctcaggaagcagctgaaaaggataaagggaaagtg 1190 Query: 934 actgtcacgtttgatttggtgggccgtaaggtaattttgaacaaggatgaaaccgcagag 993 ||||| ||||||||||||||||| |||||||||||||||||||||| | || | | | Sbjct: 1189 gtcgtcacatttgatttggtgggccgcaaggtaattttgaacaaggatggagccaccgtg 1130 Query: 994 tcggaatctgaccaagggatcatgagaccactagaacagaagcatcaggttcaacgcata 1053 | |||||| || || ||||| || |||||| ||| ||||| ||||| | || |||||| Sbjct: 1129 ttggaatccgagcaccggatcttgggaccacctgaagagaaggatcagatccaccgcata 1070 Query: 1054 cagcccagcccctcgatcagagagcagccagtcttcattgaaacaggacctgtgaagccc 1113 || ||| |||| | |||||||||||||| || ||||| |||||||| || |||||||| Sbjct: 1069 caagccaaccccacaatcagagagcagcccgtgttcatcgaaacagggccagtgaagcca 1010 Query: 1114 agaaccgacagggtaaaacagagcaagaagctcggaaagaatggcttgtgcctggaggta 1173 | ||| ||||| | ||||||||||| ||| ||||||||| |||||||||||||| Sbjct: 1009 aaaactgacagagctcgacagagcaagagactcaccaagaatggcctgtgcctggaggta 950 Query: 1174 accggaagggtgcagcatgatgacaaggatccccagagctttcttgctggcaagatgaaa 1233 || || ||| ||||||| ||||||||||| ||||||||||| || | |||||||||||| Sbjct: 949 actgggaggctgcagcacgatgacaaggacccccagagcttcctgggtggcaagatgaag 890 Query: 1234 aaaggtgaccatctcgcatacagttcctttggtcaagttcgtgaaggtgatgactatgag 1293 || ||||| ||||| || |||||||| || || ||| |||||||| || |||| || Sbjct: 889 aagggtgatcatctggcgtacagttctttcggccaaccccgtgaaggggacgacttcgac 830 Query: 1294 tgctcccttgattttgattgagc 1316 ||||||| |||||||||||||| Sbjct: 829 tgctcccaagattttgattgagc 807 Score = 278 bits (140), Expect = 6e-71 Identities = 220/244 (90%), Gaps = 2/244 (0%) Strand = Plus / Minus Query: 59 cggcggcggcgatggcgacgtcggcgagcacgtccggcgagtggctgaagggcgccctgc 118 ||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct: 2065 cggcggcggcgatggcggcgacggcgagcacgtccggcgagtggctgaagggcgcgctgc 2006 Query: 119 aggaactgaggggccgtacggggagcgccctggagctcgacgacggcctcatctccggcc 178 |||| ||| ||| | | | ||| ||||| |||||||||||| | ||||||||| |||| Sbjct: 2005 aggagctgcgggacgg-atgggtggcgcc-tggagctcgacgcggacctcatctcgggcc 1948 Query: 179 tcgtctccttctgcgagctcgcgcctccgcccgacgcggccgactacctcgcgaatattg 238 ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 1947 tcgtctccttctgcgagctcgcgcctccgcccgacgccgctgactacctcgcgaatatta 1888 Query: 239 ttggagcagaagctgcgcaggacctcattcaggagtacttgcagaggaggggctacactg 298 |||||| ||||||||| |||||||| |||||||||||||||||||||||||| |||| || Sbjct: 1887 ttggagtagaagctgctcaggaccttattcaggagtacttgcagaggaggggttacattg 1828 Query: 299 atcc 302 |||| Sbjct: 1827 atcc 1824
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 521 bits (263), Expect = e-144 Identities = 457/521 (87%), Gaps = 3/521 (0%) Strand = Plus / Minus Query: 337 cttcagccttatttgaagccatctgctgatgcagcaactgcccaaacaaagaaacagaca 396 |||||||||||| ||||||| |||||||| || | || ||||||| ||||| |||||| Sbjct: 14624619 cttcagccttatgtgaagccttctgctgaagctgggcctacccaaaccaagaagcagaca 14624560 Query: 397 cgtgcacaaaaagatccagca---tcttcttctagtcagagttccaagagtcaatcagat 453 || ||||||||||| ||||| ||||||||| | ||||||||||||| |||| |||| Sbjct: 14624559 cgcacacaaaaagatgcagcagcatcttcttctggccagagttccaagaatcaaccagag 14624500 Query: 454 gcggctgagactcatgttgtctccaagagaggtccaaaaaagaagggaggaaaggtcatc 513 | |||| | | |||| ||||||||||||| |||||||||| | || ||||| |||| Sbjct: 14624499 actactgaaccccgagttgcctccaagagaggttcaaaaaagaaagcagtaaaggccatc 14624440 Query: 514 tctcttgctgaggcagcaaagggttctattgtcttcaagcaggggaaaccttgttcatgc 573 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 14624439 tcccttgctgaggcagcgaagggttctattgtcttcaagcaggggaaaccttgttcatgc 14624380 Query: 574 caagcacgactgcacaatcttgttagcaactgcttatcatgtggaaaaattgtgtgtgaa 633 |||||||| | |||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 14624379 caagcacgccagcacaaccttgtcagcaactgcttatcatgtggcaaaattgtgtgtgaa 14624320 Query: 634 caagagggcgagggaccatgtagtttctgtggctcacttgtcttgatggaaggtagtaca 693 |||||||| ||||||||||| ||||||||||| ||||||| | |||||||| || ||| Sbjct: 14624319 caagagggtgagggaccatgcagtttctgtggtgcacttgttctaatggaaggaagcaca 14624260 Query: 694 tatgcgggtttaagtgatgttggagttcctctttcggacacagaagttgcagctgaagct 753 ||||| |||||||||||||||| | ||||||||||||| |||||| || ||||||||| Sbjct: 14624259 tatgctggtttaagtgatgttgaaattcctctttcggaagcagaagctgaagctgaagca 14624200 Query: 754 tatgcaaagaggcttgttgactatgacagaaactctgcggcaagaactaaagtgtatgat 813 |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||| Sbjct: 14624199 tatgcaaagaggcttgttgactatgacagaaactctgcagcaaggactaaagtttatgat 14624140 Query: 814 gaccaaagtgactattttgaaatggaaggaaatagttggct 854 || ||||||||||| |||||||||||||||||||||||||| Sbjct: 14624139 gatcaaagtgactactttgaaatggaaggaaatagttggct 14624099 Score = 200 bits (101), Expect = 1e-47 Identities = 155/173 (89%) Strand = Plus / Minus Query: 59 cggcggcggcgatggcgacgtcggcgagcacgtccggcgagtggctgaagggcgccctgc 118 ||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct: 14625975 cggcggcggcgatggcggcgacggcgagcacgtccggcgagtggctgaagggcgcgctgc 14625916 Query: 119 aggaactgaggggccgtacggggagcgccctggagctcgacgacggcctcatctccggcc 178 |||| ||| ||| || | ||| |||| ||||||||||||| | ||||||||| |||| Sbjct: 14625915 aggagctgcgggagcggatgggtggcgcgctggagctcgacgcggacctcatctcgggcc 14625856 Query: 179 tcgtctccttctgcgagctcgcgcctccgcccgacgcggccgactacctcgcg 231 ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 14625855 tcgtctccttctgcgagctcgcgcctccgcccgacgccgctgactacctcgcg 14625803 Score = 157 bits (79), Expect = 1e-34 Identities = 286/355 (80%) Strand = Plus / Minus Query: 962 aggtaattttgaacaaggatgaaaccgcagagtcggaatctgaccaagggatcatgagac 1021 ||||||||||||||||||||| | || | | || |||||| || || ||||| || ||| Sbjct: 14623477 aggtaattttgaacaaggatggagccaccgtgttggaatccgagcaccggatcttgggac 14623418 Query: 1022 cactagaacagaagcatcaggttcaacgcatacagcccagcccctcgatcagagagcagc 1081 ||| ||| ||||| ||||| | || |||||||| ||| |||| | ||||||||||||| Sbjct: 14623417 cacctgaagagaaggatcagatccaccgcatacaagccaaccccacaatcagagagcagc 14623358 Query: 1082 cagtcttcattgaaacaggacctgtgaagcccagaaccgacagggtaaaacagagcaaga 1141 | || ||||| |||||||| || |||||||| | ||| ||||| | ||||||||||| Sbjct: 14623357 ccgtgttcatcgaaacagggccagtgaagccaaaaactgacagagctcgacagagcaaga 14623298 Query: 1142 agctcggaaagaatggcttgtgcctggaggtaaccggaagggtgcagcatgatgacaagg 1201 ||| ||||||||| |||||||||||||||| || ||| ||||||| |||||||||| Sbjct: 14623297 gactcaccaagaatggcctgtgcctggaggtaactgggaggctgcagcacgatgacaagg 14623238 Query: 1202 atccccagagctttcttgctggcaagatgaaaaaaggtgaccatctcgcatacagttcct 1261 | ||||||||||| || | |||||||||||| || ||||| ||||| || |||||||| | Sbjct: 14623237 acccccagagcttcctgggtggcaagatgaagaagggtgatcatctggcgtacagttctt 14623178 Query: 1262 ttggtcaagttcgtgaaggtgatgactatgagtgctcccttgattttgattgagc 1316 | || ||| |||||||| || |||| || ||||||| |||||||||||||| Sbjct: 14623177 tcggccaaccccgtgaaggggacgacttcgactgctcccaagattttgattgagc 14623123 Score = 95.6 bits (48), Expect = 5e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 231 gaatattgttggagcagaagctgcgcaggacctcattcaggagtacttgcagaggagggg 290 ||||||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 14624725 gaatattattggagtagaagctgctcaggaccttattcaggagtacttgcagaggagggg 14624666 Query: 291 ctacactgatcc 302 |||| |||||| Sbjct: 14624665 ttacattgatcc 14624654 Score = 67.9 bits (34), Expect = 1e-07 Identities = 79/94 (84%) Strand = Plus / Minus Query: 875 acctaaagaaggtgcatgacgaagctcaggatgcagctgaaaaacaaaaggggaaagtga 934 ||||||||||| ||| | ||||||||||| ||||||||||| | || ||||||||| Sbjct: 14623662 acctaaagaagcagcacggggaagctcaggaagcagctgaaaaggataaagggaaagtgg 14623603 Query: 935 ctgtcacgtttgatttggtgggccgtaaggtaat 968 ||||| ||||||||||||||||| |||||||| Sbjct: 14623602 tcgtcacatttgatttggtgggccgcaaggtaat 14623569
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 521 bits (263), Expect = e-144 Identities = 457/521 (87%), Gaps = 3/521 (0%) Strand = Plus / Minus Query: 337 cttcagccttatttgaagccatctgctgatgcagcaactgcccaaacaaagaaacagaca 396 |||||||||||| ||||||| |||||||| || | || ||||||| ||||| |||||| Sbjct: 46286 cttcagccttatgtgaagccttctgctgaagctgggcctacccaaaccaagaagcagaca 46227 Query: 397 cgtgcacaaaaagatccagca---tcttcttctagtcagagttccaagagtcaatcagat 453 || ||||||||||| ||||| ||||||||| | ||||||||||||| |||| |||| Sbjct: 46226 cgcacacaaaaagatgcagcagcatcttcttctggccagagttccaagaatcaaccagag 46167 Query: 454 gcggctgagactcatgttgtctccaagagaggtccaaaaaagaagggaggaaaggtcatc 513 | |||| | | |||| ||||||||||||| |||||||||| | || ||||| |||| Sbjct: 46166 actactgaaccccgagttgcctccaagagaggttcaaaaaagaaagcagtaaaggccatc 46107 Query: 514 tctcttgctgaggcagcaaagggttctattgtcttcaagcaggggaaaccttgttcatgc 573 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 46106 tcccttgctgaggcagcgaagggttctattgtcttcaagcaggggaaaccttgttcatgc 46047 Query: 574 caagcacgactgcacaatcttgttagcaactgcttatcatgtggaaaaattgtgtgtgaa 633 |||||||| | |||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 46046 caagcacgccagcacaaccttgtcagcaactgcttatcatgtggcaaaattgtgtgtgaa 45987 Query: 634 caagagggcgagggaccatgtagtttctgtggctcacttgtcttgatggaaggtagtaca 693 |||||||| ||||||||||| ||||||||||| ||||||| | |||||||| || ||| Sbjct: 45986 caagagggtgagggaccatgcagtttctgtggtgcacttgttctaatggaaggaagcaca 45927 Query: 694 tatgcgggtttaagtgatgttggagttcctctttcggacacagaagttgcagctgaagct 753 ||||| |||||||||||||||| | ||||||||||||| |||||| || ||||||||| Sbjct: 45926 tatgctggtttaagtgatgttgaaattcctctttcggaagcagaagctgaagctgaagca 45867 Query: 754 tatgcaaagaggcttgttgactatgacagaaactctgcggcaagaactaaagtgtatgat 813 |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||| Sbjct: 45866 tatgcaaagaggcttgttgactatgacagaaactctgcagcaaggactaaagtttatgat 45807 Query: 814 gaccaaagtgactattttgaaatggaaggaaatagttggct 854 || ||||||||||| |||||||||||||||||||||||||| Sbjct: 45806 gatcaaagtgactactttgaaatggaaggaaatagttggct 45766 Score = 200 bits (101), Expect = 1e-47 Identities = 155/173 (89%) Strand = Plus / Minus Query: 59 cggcggcggcgatggcgacgtcggcgagcacgtccggcgagtggctgaagggcgccctgc 118 ||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct: 47642 cggcggcggcgatggcggcgacggcgagcacgtccggcgagtggctgaagggcgcgctgc 47583 Query: 119 aggaactgaggggccgtacggggagcgccctggagctcgacgacggcctcatctccggcc 178 |||| ||| ||| || | ||| |||| ||||||||||||| | ||||||||| |||| Sbjct: 47582 aggagctgcgggagcggatgggtggcgcgctggagctcgacgcggacctcatctcgggcc 47523 Query: 179 tcgtctccttctgcgagctcgcgcctccgcccgacgcggccgactacctcgcg 231 ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 47522 tcgtctccttctgcgagctcgcgcctccgcccgacgccgctgactacctcgcg 47470 Score = 157 bits (79), Expect = 1e-34 Identities = 286/355 (80%) Strand = Plus / Minus Query: 962 aggtaattttgaacaaggatgaaaccgcagagtcggaatctgaccaagggatcatgagac 1021 ||||||||||||||||||||| | || | | || |||||| || || ||||| || ||| Sbjct: 45144 aggtaattttgaacaaggatggagccaccgtgttggaatccgagcaccggatcttgggac 45085 Query: 1022 cactagaacagaagcatcaggttcaacgcatacagcccagcccctcgatcagagagcagc 1081 ||| ||| ||||| ||||| | || |||||||| ||| |||| | ||||||||||||| Sbjct: 45084 cacctgaagagaaggatcagatccaccgcatacaagccaaccccacaatcagagagcagc 45025 Query: 1082 cagtcttcattgaaacaggacctgtgaagcccagaaccgacagggtaaaacagagcaaga 1141 | || ||||| |||||||| || |||||||| | ||| ||||| | ||||||||||| Sbjct: 45024 ccgtgttcatcgaaacagggccagtgaagccaaaaactgacagagctcgacagagcaaga 44965 Query: 1142 agctcggaaagaatggcttgtgcctggaggtaaccggaagggtgcagcatgatgacaagg 1201 ||| ||||||||| |||||||||||||||| || ||| ||||||| |||||||||| Sbjct: 44964 gactcaccaagaatggcctgtgcctggaggtaactgggaggctgcagcacgatgacaagg 44905 Query: 1202 atccccagagctttcttgctggcaagatgaaaaaaggtgaccatctcgcatacagttcct 1261 | ||||||||||| || | |||||||||||| || ||||| ||||| || |||||||| | Sbjct: 44904 acccccagagcttcctgggtggcaagatgaagaagggtgatcatctggcgtacagttctt 44845 Query: 1262 ttggtcaagttcgtgaaggtgatgactatgagtgctcccttgattttgattgagc 1316 | || ||| |||||||| || |||| || ||||||| |||||||||||||| Sbjct: 44844 tcggccaaccccgtgaaggggacgacttcgactgctcccaagattttgattgagc 44790 Score = 95.6 bits (48), Expect = 5e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 231 gaatattgttggagcagaagctgcgcaggacctcattcaggagtacttgcagaggagggg 290 ||||||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 46392 gaatattattggagtagaagctgctcaggaccttattcaggagtacttgcagaggagggg 46333 Query: 291 ctacactgatcc 302 |||| |||||| Sbjct: 46332 ttacattgatcc 46321 Score = 67.9 bits (34), Expect = 1e-07 Identities = 79/94 (84%) Strand = Plus / Minus Query: 875 acctaaagaaggtgcatgacgaagctcaggatgcagctgaaaaacaaaaggggaaagtga 934 ||||||||||| ||| | ||||||||||| ||||||||||| | || ||||||||| Sbjct: 45329 acctaaagaagcagcacggggaagctcaggaagcagctgaaaaggataaagggaaagtgg 45270 Query: 935 ctgtcacgtttgatttggtgggccgtaaggtaat 968 ||||| ||||||||||||||||| |||||||| Sbjct: 45269 tcgtcacatttgatttggtgggccgcaaggtaat 45236
>ref|NM_001069696.1| Oryza sativa (japonica cultivar-group) Os09g0413100 (Os09g0413100) mRNA, complete cds Length = 769 Score = 309 bits (156), Expect = 2e-80 Identities = 441/536 (82%) Strand = Plus / Plus Query: 781 agaaactctgcggcaagaactaaagtgtatgatgaccaaagtgactattttgaaatggaa 840 ||||||||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 1 agaaactctgcagcaaggactaaagtttatgatgatcaaagtgactactttgaaatggaa 60 Query: 841 ggaaatagttggctctcatctaagggaaagacaaacctaaagaaggtgcatgacgaagct 900 |||||||||||||| || || |||| |||| || ||||||||||| ||| | |||||| Sbjct: 61 ggaaatagttggctttcttcaaaggaaaagtcagacctaaagaagcagcacggggaagct 120 Query: 901 caggatgcagctgaaaaacaaaaggggaaagtgactgtcacgtttgatttggtgggccgt 960 ||||| ||||||||||| | || ||||||||| ||||| ||||||||||||||||| Sbjct: 121 caggaagcagctgaaaaggataaagggaaagtggtcgtcacatttgatttggtgggccgc 180 Query: 961 aaggtaattttgaacaaggatgaaaccgcagagtcggaatctgaccaagggatcatgaga 1020 |||||||||||||||||||||| | || | | || |||||| || || ||||| || || Sbjct: 181 aaggtaattttgaacaaggatggagccaccgtgttggaatccgagcaccggatcttggga 240 Query: 1021 ccactagaacagaagcatcaggttcaacgcatacagcccagcccctcgatcagagagcag 1080 |||| ||| ||||| ||||| | || |||||||| ||| |||| | |||||||||||| Sbjct: 241 ccacctgaagagaaggatcagatccaccgcatacaagccaaccccacaatcagagagcag 300 Query: 1081 ccagtcttcattgaaacaggacctgtgaagcccagaaccgacagggtaaaacagagcaag 1140 || || ||||| |||||||| || |||||||| | ||| ||||| | |||||||||| Sbjct: 301 cccgtgttcatcgaaacagggccagtgaagccaaaaactgacagagctcgacagagcaag 360 Query: 1141 aagctcggaaagaatggcttgtgcctggaggtaaccggaagggtgcagcatgatgacaag 1200 | ||| ||||||||| |||||||||||||||| || ||| ||||||| ||||||||| Sbjct: 361 agactcaccaagaatggcctgtgcctggaggtaactgggaggctgcagcacgatgacaag 420 Query: 1201 gatccccagagctttcttgctggcaagatgaaaaaaggtgaccatctcgcatacagttcc 1260 || ||||||||||| || | |||||||||||| || ||||| ||||| || |||||||| Sbjct: 421 gacccccagagcttcctgggtggcaagatgaagaagggtgatcatctggcgtacagttct 480 Query: 1261 tttggtcaagttcgtgaaggtgatgactatgagtgctcccttgattttgattgagc 1316 || || ||| |||||||| || |||| || ||||||| |||||||||||||| Sbjct: 481 ttcggccaaccccgtgaaggggacgacttcgactgctcccaagattttgattgagc 536
>dbj|AK062649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E05, full insert sequence Length = 769 Score = 309 bits (156), Expect = 2e-80 Identities = 441/536 (82%) Strand = Plus / Plus Query: 781 agaaactctgcggcaagaactaaagtgtatgatgaccaaagtgactattttgaaatggaa 840 ||||||||||| ||||| |||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 1 agaaactctgcagcaaggactaaagtttatgatgatcaaagtgactactttgaaatggaa 60 Query: 841 ggaaatagttggctctcatctaagggaaagacaaacctaaagaaggtgcatgacgaagct 900 |||||||||||||| || || |||| |||| || ||||||||||| ||| | |||||| Sbjct: 61 ggaaatagttggctttcttcaaaggaaaagtcagacctaaagaagcagcacggggaagct 120 Query: 901 caggatgcagctgaaaaacaaaaggggaaagtgactgtcacgtttgatttggtgggccgt 960 ||||| ||||||||||| | || ||||||||| ||||| ||||||||||||||||| Sbjct: 121 caggaagcagctgaaaaggataaagggaaagtggtcgtcacatttgatttggtgggccgc 180 Query: 961 aaggtaattttgaacaaggatgaaaccgcagagtcggaatctgaccaagggatcatgaga 1020 |||||||||||||||||||||| | || | | || |||||| || || ||||| || || Sbjct: 181 aaggtaattttgaacaaggatggagccaccgtgttggaatccgagcaccggatcttggga 240 Query: 1021 ccactagaacagaagcatcaggttcaacgcatacagcccagcccctcgatcagagagcag 1080 |||| ||| ||||| ||||| | || |||||||| ||| |||| | |||||||||||| Sbjct: 241 ccacctgaagagaaggatcagatccaccgcatacaagccaaccccacaatcagagagcag 300 Query: 1081 ccagtcttcattgaaacaggacctgtgaagcccagaaccgacagggtaaaacagagcaag 1140 || || ||||| |||||||| || |||||||| | ||| ||||| | |||||||||| Sbjct: 301 cccgtgttcatcgaaacagggccagtgaagccaaaaactgacagagctcgacagagcaag 360 Query: 1141 aagctcggaaagaatggcttgtgcctggaggtaaccggaagggtgcagcatgatgacaag 1200 | ||| ||||||||| |||||||||||||||| || ||| ||||||| ||||||||| Sbjct: 361 agactcaccaagaatggcctgtgcctggaggtaactgggaggctgcagcacgatgacaag 420 Query: 1201 gatccccagagctttcttgctggcaagatgaaaaaaggtgaccatctcgcatacagttcc 1260 || ||||||||||| || | |||||||||||| || ||||| ||||| || |||||||| Sbjct: 421 gacccccagagcttcctgggtggcaagatgaagaagggtgatcatctggcgtacagttct 480 Query: 1261 tttggtcaagttcgtgaaggtgatgactatgagtgctcccttgattttgattgagc 1316 || || ||| |||||||| || |||| || ||||||| |||||||||||||| Sbjct: 481 ttcggccaaccccgtgaaggggacgacttcgactgctcccaagattttgattgagc 536
>gb|AY111806.1| Zea mays CL36156_1 mRNA sequence Length = 691 Score = 105 bits (53), Expect = 5e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 831 tgaaatggaaggaaatagttggctctcatctaagggaaagacaaacctaaagaaggtgca 890 ||||||||||||||| ||||||||||| || |||| | | || ||| ||| || ||| Sbjct: 6 tgaaatggaaggaaacagttggctctcttcaaaggagaggtcagtcctgaagcagcagca 65 Query: 891 tgacgaagctcaggatgcagctgaaaaacaaaaggggaaagtgactgtcacgtttgattt 950 || |||||| |||| |||||| | | |||||||||||||||| ||| || |||||||| Sbjct: 66 agaggaagctgaggaagcagctaanagccaaaaggggaaagtgattgttacatttgattt 125 Query: 951 ggtgggccgtaaggtaattttgaacaaggatg 982 ||||||||||||||| |||||||||||||||| Sbjct: 126 ggtgggccgtaaggtgattttgaacaaggatg 157 Score = 83.8 bits (42), Expect = 2e-12 Identities = 66/74 (89%) Strand = Plus / Plus Query: 1128 aaaacagagcaagaagctcggaaagaatggcttgtgcctggaggtaaccggaagggtgca 1187 |||||||||||||| ||| | |||||||| |||||||||||||||||||| || |||| Sbjct: 303 aaaacagagcaagaggcttgccaagaatggtctgtgcctggaggtaaccggacggctgca 362 Query: 1188 gcatgatgacaagg 1201 |||||||||||||| Sbjct: 363 gcatgatgacaagg 376
>gb|BT014005.1| Lycopersicon esculentum clone 133055F, mRNA sequence Length = 1488 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 742 gcagctgaagcttatgcaaagaggcttgttgactatga 779 ||||||||||| |||||||||||||| ||||||||||| Sbjct: 724 gcagctgaagcgtatgcaaagaggctagttgactatga 761
>emb|CT828167.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA005A06, full insert sequence Length = 580 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 59 cggcggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||||||| Sbjct: 6 cggcggcggcgatggcgacgtcggcg 31
>ref|NM_001065106.1| Oryza sativa (japonica cultivar-group) Os06g0714100 (Os06g0714100) mRNA, complete cds Length = 672 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 59 cggcggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||||||| Sbjct: 58 cggcggcggcgatggcgacgtcggcg 83
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Minus Query: 59 cggcggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||||||| Sbjct: 29765783 cggcggcggcgatggcgacgtcggcg 29765758
>dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_F03 Length = 110783 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Minus Query: 59 cggcggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||||||| Sbjct: 63913 cggcggcggcgatggcgacgtcggcg 63888
>dbj|AK121079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062M13, full insert sequence Length = 673 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 59 cggcggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||||||| Sbjct: 59 cggcggcggcgatggcgacgtcggcg 84
>ref|XM_001109916.1| PREDICTED: Macaca mulatta similar to Zinc finger CCCH-type domain-containing protein 6 (LOC717905), mRNA Length = 6138 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 59 cggcggcggcgatggcgacgtcggcga 85 |||||||||||||||||||| |||||| Sbjct: 107 cggcggcggcgatggcgacggcggcga 81
>gb|AC145364.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062D09, complete sequence Length = 160244 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 62 cggcggcgatggcgacgtcggcg 84 ||||||||||||||||||||||| Sbjct: 11978 cggcggcgatggcgacgtcggcg 12000
>ref|XM_757648.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0617) partial mRNA Length = 2388 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 844 aatagttggctctcatctaagggaaag 870 |||||||||||||||||||| |||||| Sbjct: 162 aatagttggctctcatctaatggaaag 188
>emb|X55385.1|TPTPR T.parva Tpr gene Length = 8115 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 844 aatagttggctctcatctaagggaaag 870 |||||||||||||||||||| |||||| Sbjct: 778 aatagttggctctcatctaatggaaag 804
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 62 cggcggcgatggcgacgtcggcg 84 ||||||||||||||||||||||| Sbjct: 8587593 cggcggcgatggcgacgtcggcg 8587571 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 1182448 ggcggcgatggcgacgtcggcg 1182427 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 25076275 ggcggcgatggcgacgtcggcg 25076254
>emb|CR855108.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0111I14, complete sequence Length = 82987 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 75033 ggcggcgatggcgacgtcggcg 75054
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 909 agctgaaaaacaaaaggggaaa 930 |||||||||||||||||||||| Sbjct: 26219973 agctgaaaaacaaaaggggaaa 26219952
>gb|CP000432.1| Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence Length = 1123075 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 55 gcaacggcggcggcgatggcgacgtcggcg 84 |||||||||||||||| |||| |||||||| Sbjct: 763140 gcaacggcggcggcgagggcggcgtcggcg 763169
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 gcgatggcgacgtcggcgagca 88 |||||||||||||||||||||| Sbjct: 8592994 gcgatggcgacgtcggcgagca 8592973
>gb|AY529997.1| Oriolus xanthornus beta-fibrinogen gene, intron 5 and partial cds Length = 567 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 ttgaagccatctgctgatgcag 370 |||||||||||||||||||||| Sbjct: 173 ttgaagccatctgctgatgcag 194
>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0079P23, complete sequence Length = 125090 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 15310 ggcggcgatggcgacgtcggcg 15289
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 29346 ggcggcgatggcgacgtcggcg 29367
>gb|AC098707.2| Mus musculus BAC clone RP23-1I13 from 18, complete sequence Length = 230128 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 824 actattttgaaatggaaggaaatagt 849 ||||||||||||||||||||| |||| Sbjct: 129291 actattttgaaatggaaggaattagt 129266
>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18, complete sequence Length = 150279 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 78254 ggcggcgatggcgacgtcggcg 78233
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 642754 ggcggcgatggcgacgtcggcg 642775
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 23817 ggcggcgatggcgacgtcggcg 23796
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete sequence Length = 189349 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 110362 ggcggcgatggcgacgtcggcg 110383
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 642754 ggcggcgatggcgacgtcggcg 642775 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 20761418 ggcggcgatggcgacgtcggcg 20761397
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 18949315 ggcggcgatggcgacgtcggcg 18949294 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 gcggcgatggcgacgtcggcga 85 |||||||||||||||||||||| Sbjct: 20718189 gcggcgatggcgacgtcggcga 20718168 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 acggcggcggcgatggcgacg 78 ||||||||||||||||||||| Sbjct: 4120953 acggcggcggcgatggcgacg 4120973
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 19569447 ggcggcgatggcgacgtcggcg 19569468
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 9975397 ggcggcgatggcgacgtcggcg 9975418 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 16527783 ggcggcgatggcgacgtcggcg 16527804
>gb|AC074194.6| Homo sapiens BAC clone RP11-739P1 from 4, complete sequence Length = 177273 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 860 ctaagggaaagacaaacctaaa 881 |||||||||||||||||||||| Sbjct: 64145 ctaagggaaagacaaacctaaa 64124
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 59 cggcggcggcgatggcgacgtcggcg 84 ||||| |||||||||||||||||||| Sbjct: 1553054 cggcgccggcgatggcgacgtcggcg 1553079 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 gctcgcgcctccgcccgacgcggcc 219 ||||||||| ||||||||||||||| Sbjct: 1411931 gctcgcgcccccgcccgacgcggcc 1411955
>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02, complete sequence Length = 172435 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 57016 ggcggcgatggcgacgtcggcg 57037
>emb|AL606991.3|OSJN00113 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032B23, complete sequence Length = 120640 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 70347 ggcggcgatggcgacgtcggcg 70368
>gb|AC008286.11|AC008286 Drosophila melanogaster, chromosome 3R, region 99F-99F, BAC clone BACR22M06, complete sequence Length = 154003 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 909 agctgaaaaacaaaaggggaaa 930 |||||||||||||||||||||| Sbjct: 95403 agctgaaaaacaaaaggggaaa 95382
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 58 acggcggcggcgatggcgacgtcggc 83 ||||||||||||||||||| |||||| Sbjct: 1313342 acggcggcggcgatggcgaggtcggc 1313367 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 59 cggcggcggcgatggcgacgtcggcgagc 87 ||||||||||||||| | ||||||||||| Sbjct: 4097352 cggcggcggcgatggtgccgtcggcgagc 4097324
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ggcggcgatggcgacgtcggcg 84 |||||||||||||||||||||| Sbjct: 51300 ggcggcgatggcgacgtcggcg 51279
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 gcggcgatggcgacgtcggcga 85 |||||||||||||||||||||| Sbjct: 70939 gcggcgatggcgacgtcggcga 70918
>gb|AE005115.1| Halobacterium sp. NRC-1 section 146 of 170 of the complete genome Length = 14635 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 59 cggcggcggcgatggcgacgtcggcg 84 ||||||||||||||||| |||||||| Sbjct: 2078 cggcggcggcgatggcgtcgtcggcg 2103
>gb|AC134249.4| Mus musculus BAC clone RP23-359K17 from 12, complete sequence Length = 190423 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 500 gaggaaaggtcatctctcttgc 521 |||||||||||||||||||||| Sbjct: 190347 gaggaaaggtcatctctcttgc 190368
>gb|AC124516.4| Mus musculus BAC clone RP23-387C9 from 12, complete sequence Length = 236774 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 500 gaggaaaggtcatctctcttgc 521 |||||||||||||||||||||| Sbjct: 215466 gaggaaaggtcatctctcttgc 215445
>ref|NM_001065560.1| Oryza sativa (japonica cultivar-group) Os07g0177200 (Os07g0177200) mRNA, complete cds Length = 921 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 acggcggcggcgatggcgacg 78 ||||||||||||||||||||| Sbjct: 171 acggcggcggcgatggcgacg 151
>ref|NM_001052706.1| Oryza sativa (japonica cultivar-group) Os02g0193600 (Os02g0193600) mRNA, complete cds Length = 1494 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ggcggcggcgatggcgacgtcggcg 84 ||||||||||||||||||| ||||| Sbjct: 85 ggcggcggcgatggcgacgacggcg 109
>ref|XM_526380.2| PREDICTED: Pan troglodytes phospholipase D1, phophatidylcholine-specific (PLD1), mRNA Length = 6038 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 caaagtgactattttgaaatg 837 ||||||||||||||||||||| Sbjct: 5997 caaagtgactattttgaaatg 6017
>emb|CT842122.6| Pig DNA sequence from clone CH242-168H13 on chromosome 7, complete sequence Length = 222190 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 tctccaagagaggtccaaaaa 493 ||||||||||||||||||||| Sbjct: 190701 tctccaagagaggtccaaaaa 190681
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 905 atgcagctgaaaaacaaaagg 925 ||||||||||||||||||||| Sbjct: 15718232 atgcagctgaaaaacaaaagg 15718212
>ref|XM_001085464.1| PREDICTED: Macaca mulatta phospholipase D1, phophatidylcholine-specific (PLD1), mRNA Length = 6077 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 caaagtgactattttgaaatg 837 ||||||||||||||||||||| Sbjct: 6036 caaagtgactattttgaaatg 6056
>gb|DQ516902.1| Methanocaldococcus jannaschii spike-in control MJ-8000-186 genomic sequence Length = 8000 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 466 catgttgtctccaagagaggtccaaaaaa 494 |||||| ||||||||||||||| |||||| Sbjct: 1351 catgttatctccaagagaggtcaaaaaaa 1379
>ref|NM_114629.3| Arabidopsis thaliana unknown protein (AT3G47610) mRNA, complete cds Length = 1500 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 598 agcaactgcttatcatgtggaaaaattgtgtgtgaacaaga 638 ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 568 agcaactgcttgtcgtgtgggaaaatagtgtgcgaacaaga 608
>gb|DQ217304.1| Taeniopygia guttata clone 0065P0012A06 mRNA sequence Length = 1045 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ggcggcggcgatggcgacgtcggcg 84 ||||||||||||||||||| ||||| Sbjct: 51 ggcggcggcgatggcgacggcggcg 75
>gb|AC016931.21| Homo sapiens 3 BAC RP11-22E12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169032 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 aaagaagggaggaaaggtcat 512 ||||||||||||||||||||| Sbjct: 2334 aaagaagggaggaaaggtcat 2314
>gb|AY079317.1| Arabidopsis thaliana unknown protein (At3g47610) mRNA, complete cds Length = 1258 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 598 agcaactgcttatcatgtggaaaaattgtgtgtgaacaaga 638 ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 511 agcaactgcttgtcgtgtgggaaaatagtgtgcgaacaaga 551
>gb|AY045958.1| Arabidopsis thaliana unknown protein (At3g47610) mRNA, complete cds Length = 1390 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 598 agcaactgcttatcatgtggaaaaattgtgtgtgaacaaga 638 ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 568 agcaactgcttgtcgtgtgggaaaatagtgtgcgaacaaga 608
>ref|XM_756188.1| Ustilago maydis 521 hypothetical protein (UM05134.1) partial mRNA Length = 5622 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1044 tcaacgcatacagcccagccc 1064 ||||||||||||||||||||| Sbjct: 752 tcaacgcatacagcccagccc 772
>gb|AC010695.5| Drosophila melanogaster 3L BAC RP98-20J4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160650 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 905 atgcagctgaaaaacaaaagg 925 ||||||||||||||||||||| Sbjct: 76954 atgcagctgaaaaacaaaagg 76934
>gb|AE005873.1| Caulobacter crescentus CB15 section 199 of 359 of the complete genome Length = 10022 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 58 acggcggcggcgatggcgacgtcggcgag 86 ||||||||||||||||||| | ||||||| Sbjct: 7817 acggcggcggcgatggcgagggcggcgag 7789
>gb|AC008134.3| Homo sapiens 3q26.2-27 BAC RPCI11-263C16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175132 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 817 caaagtgactattttgaaatg 837 ||||||||||||||||||||| Sbjct: 116021 caaagtgactattttgaaatg 116001
>emb|CT009566.5| Pig DNA sequence from clone CH242-258I7 on chromosome 17, complete sequence Length = 75808 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1006 caagggatcatgagaccacta 1026 ||||||||||||||||||||| Sbjct: 55200 caagggatcatgagaccacta 55220
>gb|AC068648.16| Homo sapiens 12 BAC RP11-331C18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 126325 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1218 tgctggcaagatgaaaaaagg 1238 ||||||||||||||||||||| Sbjct: 22696 tgctggcaagatgaaaaaagg 22676
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ggcggcggcgatggcgacgtcggcg 84 ||||||||||||||||||| ||||| Sbjct: 5209315 ggcggcggcgatggcgacgacggcg 5209339
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gcggcgatggcgacgtcggcg 84 ||||||||||||||||||||| Sbjct: 24737091 gcggcgatggcgacgtcggcg 24737071 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gcggcgatggcgacgtcggcg 84 ||||||||||||||||||||| Sbjct: 24747042 gcggcgatggcgacgtcggcg 24747022
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 ggcaacggcggcggcgatggc 74 ||||||||||||||||||||| Sbjct: 18653121 ggcaacggcggcggcgatggc 18653101
>dbj|AB209907.1| Homo sapiens mRNA for phospholipase D1 variant protein Length = 5855 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 caaagtgactattttgaaatg 837 ||||||||||||||||||||| Sbjct: 5814 caaagtgactattttgaaatg 5834
>gb|AY088993.1| Arabidopsis thaliana clone 13265 mRNA, complete sequence Length = 1372 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 598 agcaactgcttatcatgtggaaaaattgtgtgtgaacaaga 638 ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 557 agcaactgcttgtcgtgtgggaaaatagtgtgcgaacaaga 597
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2 Length = 101154 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 598 agcaactgcttatcatgtggaaaaattgtgtgtgaacaaga 638 ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 63487 agcaactgcttgtcgtgtgggaaaatagtgtgcgaacaaga 63527
>gb|AC110766.5| Homo sapiens BAC clone RP11-93M12 from 4, complete sequence Length = 169442 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 815 accaaagtgactattttgaaa 835 ||||||||||||||||||||| Sbjct: 120293 accaaagtgactattttgaaa 120273
>gb|AC022165.9| Homo sapiens chromosome 16 clone RP11-517C16, complete sequence Length = 213464 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1005 ccaagggatcatgagaccact 1025 ||||||||||||||||||||| Sbjct: 207218 ccaagggatcatgagaccact 207198
>dbj|AP003276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0516D04 Length = 140491 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 ggcaacggcggcggcgatggc 74 ||||||||||||||||||||| Sbjct: 76394 ggcaacggcggcggcgatggc 76374
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gcggcgatggcgacgtcggcg 84 ||||||||||||||||||||| Sbjct: 115780 gcggcgatggcgacgtcggcg 115760 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gcggcgatggcgacgtcggcg 84 ||||||||||||||||||||| Sbjct: 125731 gcggcgatggcgacgtcggcg 125711
>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1005_B10 Length = 142680 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 ggcaacggcggcggcgatggc 74 ||||||||||||||||||||| Sbjct: 40567 ggcaacggcggcggcgatggc 40547
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 acggcggcggcgatggcgacg 78 ||||||||||||||||||||| Sbjct: 4575 acggcggcggcgatggcgacg 4595
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 acggcggcggcgatggcgacg 78 ||||||||||||||||||||| Sbjct: 113811 acggcggcggcgatggcgacg 113831
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ggcggcggcgatggcgacgtcggcg 84 ||||||||||||||||||| ||||| Sbjct: 102768 ggcggcggcgatggcgacgacggcg 102792
>ref|XM_957566.1| Neurospora crassa OR74A hypothetical protein (NCU07989.1) partial mRNA Length = 432 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1112 ccagaaccgacagggtaaaac 1132 ||||||||||||||||||||| Sbjct: 21 ccagaaccgacagggtaaaac 41
>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3), anthocyanin biosynthesis regulatory protein Pl1_B73 (Z576C20.4), putative growth-regulating factor 1 (Z576C20.6), and putative aminoalcoholphosphotransferase (Z576C20.14) genes, complete cds; and putative receptor protein kinase (Z576C20.21) gene, partial cds Length = 155173 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 acggcggcggcgatggcgacg 78 ||||||||||||||||||||| Sbjct: 51400 acggcggcggcgatggcgacg 51420
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 tattgttggagcagaagctgc 254 ||||||||||||||||||||| Sbjct: 3173185 tattgttggagcagaagctgc 3173165
>dbj|AK102957.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115G14, full insert sequence Length = 487 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 54 ggcaacggcggcggcgatggcgacgtcggcgag 86 |||| |||||||||||| ||||||| ||||||| Sbjct: 384 ggcagcggcggcggcgaaggcgacgccggcgag 352
>emb|BX822688.1|CNS0A5TZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZD10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1319 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 598 agcaactgcttatcatgtggaaaaattgtgtgtgaacaaga 638 ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 542 agcaactgcttgtcgtgtgggaaaatagtgtgcgaacaaga 582
>emb|BX824080.1|CNS0A5HV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH20ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1335 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 598 agcaactgcttatcatgtggaaaaattgtgtgtgaacaaga 638 ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 550 agcaactgcttgtcgtgtgggaaaatagtgtgcgaacaaga 590
>emb|BX823710.1|CNS0A5GJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1300 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 598 agcaactgcttatcatgtggaaaaattgtgtgtgaacaaga 638 ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 532 agcaactgcttgtcgtgtgggaaaatagtgtgcgaacaaga 572
>emb|BX823586.1|CNS0A5A9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZG03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1463 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 598 agcaactgcttatcatgtggaaaaattgtgtgtgaacaaga 638 ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 531 agcaactgcttgtcgtgtgggaaaatagtgtgcgaacaaga 571
>dbj|AK070925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023070O07, full insert sequence Length = 922 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 acggcggcggcgatggcgacg 78 ||||||||||||||||||||| Sbjct: 172 acggcggcggcgatggcgacg 152
>dbj|AK060499.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E12, full insert sequence Length = 1494 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ggcggcggcgatggcgacgtcggcg 84 ||||||||||||||||||| ||||| Sbjct: 85 ggcggcggcgatggcgacgacggcg 109
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ggcggcggcgatggcgacgtcggcg 84 ||||||||||||||||||| ||||| Sbjct: 2792247 ggcggcggcgatggcgacggcggcg 2792271
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 702 tttaagtgatgttggagttcc 722 ||||||||||||||||||||| Sbjct: 91696 tttaagtgatgttggagttcc 91716
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 466 catgttgtctccaagagaggtccaaaaaa 494 |||||| ||||||||||||||| |||||| Sbjct: 893181 catgttatctccaagagaggtcaaaaaaa 893209
>gb|AC002420.1|AC002420 Human Chromosome X, complete sequence Length = 80568 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 ttgaagccatctgctgatgca 369 ||||||||||||||||||||| Sbjct: 36571 ttgaagccatctgctgatgca 36591
>gb|AC092145.2| Homo sapiens chromosome 16 clone RP11-61F12, complete sequence Length = 113176 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1005 ccaagggatcatgagaccact 1025 ||||||||||||||||||||| Sbjct: 27887 ccaagggatcatgagaccact 27867 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 293,836,762 Number of extensions: 16293113 Number of successful extensions: 308643 Number of sequences better than 10.0: 91 Number of HSP's gapped: 308623 Number of HSP's successfully gapped: 116 Length of query: 1569 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1546 Effective length of database: 18,503,978,556 Effective search space: 28607150847576 Effective search space used: 28607150847576 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)