No.
Definition
Score (bits)
E Value
1 ref|NM_001056757.1| Oryza sativa (japonica cultivar-group) Os03g...
1187
0.0
2 dbj|AK101145.1| Oryza sativa (japonica cultivar-group) cDNA clon...
1187
0.0
3 dbj|AK069760.1| Oryza sativa (japonica cultivar-group) cDNA clon...
1187
0.0
4 dbj|AK067678.1| Oryza sativa (japonica cultivar-group) cDNA clon...
1187
0.0
5 dbj|AK065781.1| Oryza sativa (japonica cultivar-group) cDNA clon...
1187
0.0
6 dbj|AK062206.1| Oryza sativa (japonica cultivar-group) cDNA clon...
878
0.0
7 gb|AY109452.1| Zea mays CL2657_1 mRNA sequence
563
e-157
8 gb|BT023962.1| Zea mays clone EL01N0412B07 mRNA sequence
525
e-145
9 gb|BT018682.1| Zea mays clone EL01N0511F05.d mRNA sequence
504
e-139
10 gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genom...
486
e-133
11 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
486
e-133
12 emb|CT828699.1| Oryza sativa (indica cultivar-group) cDNA clone:...
135
7e-28
13 emb|AM286254.1| Platanus x acerifolia partial mRNA for putative ...
70
4e-08
14 gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosom...
50
0.033
15 dbj|AK227617.1| Arabidopsis thaliana mRNA for hypothetical prote...
48
0.13
16 ref|NM_101282.2| Arabidopsis thaliana nucleic acid binding (AT1G...
48
0.13
17 ref|NM_001035967.1| Arabidopsis thaliana nucleic acid binding (A...
48
0.13
18 gb|AC007576.3| Arabidopsis thaliana chromosome I BAC F7A19 genom...
48
0.13
19 gb|BT006443.1| Arabidopsis thaliana At1g14170 gene, complete cds
48
0.13
20 gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome ...
46
0.51
21 gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, comple...
46
0.51
22 gb|AC193776.1| Solanum lycopersicum chromosome 1 clone C01HBa000...
44
2.0
23 gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome
44
2.0
24 gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome
44
2.0
25 gb|AC157757.25| Medicago truncatula clone mth2-16j22, complete s...
44
2.0
26 emb|AL159974.21| Human DNA sequence from clone RP11-255E21 on ch...
44
2.0
27 emb|AL139006.13| Human DNA sequence from clone RP11-30E17 on chr...
44
2.0
28 gb|U79580.2|PAU79580 Pseudomonas aeruginosa pilK gene, partial s...
44
2.0
29 gb|AC135800.24| Medicago truncatula clone mth2-14g8, complete se...
44
2.0
30 gb|AC189567.1| Brassica rapa subsp. pekinensis clone KBrH009H15,...
42
8.0
31 ref|XM_001060645.1| PREDICTED: Rattus norvegicus similar to down...
42
8.0
32 gb|AC140544.21| Medicago truncatula clone mth2-17g16, complete s...
42
8.0
33 gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
42
8.0
34 gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr...
42
8.0
35 gb|BT014327.1| Lycopersicon esculentum clone 133600F, mRNA sequence
42
8.0
36 gb|BT013445.1| Lycopersicon esculentum clone 132100R, mRNA sequence
42
8.0
37 gb|AC165370.4| Mus musculus BAC clone RP23-2N3 from chromosome 1...
42
8.0
38 gb|AC133207.3| Mus musculus BAC clone RP23-116L23 from chromosom...
42
8.0
39 gb|AC009831.21| Homo sapiens chromosome , clone RP11-326K13, com...
42
8.0
40 gb|AC087889.15| Mus Musculus Strain C57BL6/J Chromosome 10 BAC, ...
42
8.0
41 gb|AC110088.5| Homo sapiens BAC clone RP11-783N5 from 4, complet...
42
8.0
42 gb|AC098822.3| Homo sapiens BAC clone RP11-338B23 from 4, comple...
42
8.0
43 emb|AL008723.8|HS90G24 Human DNA sequence from clone RP1-90G24 o...
42
8.0
44 gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete se...
42
8.0
45 gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete se...
42
8.0
46 gb|AC092687.3| Homo sapiens BAC clone RP11-791G15 from 2, comple...
42
8.0
47 emb|CR381695.4| Zebrafish DNA sequence from clone CH211-265I20 i...
42
8.0
48 emb|BX120006.15| Zebrafish DNA sequence from clone DKEYP-21H4 in...
42
8.0
49 emb|BX548251.5| Zebrafish DNA sequence from clone BUSM1-127I14, ...
42
8.0
50 emb|BX465203.6| Zebrafish DNA sequence from clone CH211-221F10 i...
42
8.0
51 dbj|AP006135.1| Lotus japonicus genomic DNA, chromosome 1, clone...
42
8.0
52 emb|AJ236582.1|HSA236582 Homo sapiens chromosome 18 CpG island D...
42
8.0
53 ref|NM_001025129.1| Rattus norvegicus similar to downregulated i...
42
8.0
54 emb|AL805900.10| Mouse DNA sequence from clone RP23-85B14 on chr...
42
8.0
55 gb|AC133948.3| Mus musculus BAC clone RP24-226H19 from 10, compl...
42
8.0
56 gb|AC133158.2| Mus musculus BAC clone RP24-491F15 from 8, comple...
42
8.0
57 gb|AC142262.3| Mus musculus BAC clone RP24-486I4 from 8, complet...
42
8.0
58 ref|XM_738657.1| Plasmodium chabaudi chabaudi hypothetical prote...
42
8.0
59 emb|AL645491.15| Mouse DNA sequence from clone RP23-10H1 on chro...
42
8.0
60 emb|AL671321.16| Mouse DNA sequence from clone RP23-274I19 on ch...
42
8.0
>dbj|AK101145.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033026O12, full
insert sequence
Length = 2971
Score = 1187 bits (599), Expect = 0.0
Identities = 1175/1367 (85%)
Strand = Plus / Plus
Query: 113 atggtcgggcctgggcaccggaacagtcatggaaagcggcagtctgattattctgaaaat 172
||||| || |||||||| |||||||||| || ||||| || ||||||||| ||||||||
Sbjct: 90 atggttggacctgggcataggaacagtcacgggaagcgtcactctgattatgctgaaaat 149
Query: 173 ggaggtggcaagagaagaaatcctggtgatgatacctatgctcctggtccagacgacact 232
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||
Sbjct: 150 ggaggtggcaagagaaggaatcctggtgatgatacatatgctcctggtccagatgatact 209
Query: 233 gtctatcgctacctctgcacgtctaggaaaatagggagtataattgggaggggtggagaa 292
||||| ||||| || ||| | ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 210 gtctaccgctatctttgcccttctagaaaaatagggagcatcattgggaggggtggagaa 269
Query: 293 attgccaagcagctcaggagcgatactcaagctaaaattaggattggtgagagtgtccct 352
||||| |||||| | ||| ||| ||||||||||| || ||||||||||||||||| ||
Sbjct: 270 attgctaagcagatgagggccgacactcaagctaagataaggattggtgagagtgtatct 329
Query: 353 gcctgcgatgaacgagtcataacaatatttagctcaagcagggagactaataccattgaa 412
| || ||||| |||| || ||||||||||||||||||||||| ||||||||| | | |
Sbjct: 330 ggttgtgatgagagagttatcacaatatttagctcaagcagggaaactaataccctagta 389
Query: 413 gatactgaagataaggtttgcccagctcaagatgctctctttagggttcatgagaagctt 472
||| ||||||||||||||||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 390 gatgctgaagataaggtttgccctgcccaagacgctctctttagagttcatgaaaagcta 449
Query: 473 gccacagatgatggtcctgtgaacaaagaaaatgaagagagtttaggtcaagttactgtt 532
||| |||||||| | || ||| |||||| ||| || |||||| ||||||||| |||
Sbjct: 450 tccatagatgatgatattgggaatgaagaaagtgatgaaggtttagctcaagttaccgtt 509
Query: 533 cggttgcttgtgccatctgatcagattggatgcattattggaaaaggtgggcatatcatc 592
||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct: 510 cggttgcttgtgccatcagaccagattggatgcattattggaaaaggtgggcatattata 569
Query: 593 cagggaatccgcagcgacactggttcacaaatacgagttcttagtaatgaacatcttcct 652
|||||||||||||| ||||||||| | || ||||| |||||||| |||||| |||| |||
Sbjct: 570 cagggaatccgcagtgacactggtgctcatatacgtgttcttagcaatgaaaatctccct 629
Query: 653 ctatgtgctactagtggtgatgaacttctcctgataactggggatccgatggtagttaga 712
||||| | ||||||||||||||||| | |||| ||||||| | | || || |||
Sbjct: 630 gcgtgtgccatcagtggtgatgaacttcttcagatatctggggactcaacagttgtcaga 689
Query: 713 aaagctcttctccaagtgtcatctcgcctccatggcaacccatccaggtcacagcatctt 772
||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||
Sbjct: 690 aaagctcttcttcaagtgtcatctcgtctccatgacaacccatctaggtcacagcatctt 749
Query: 773 cttgcgtccagcttaaaccaaccttttccagtgggctcccgccttggtagttcctctact 832
||||| |||||| | | || |||| |||||||||||||| ||||||||||||||| |||
Sbjct: 750 cttgcatccagcatgacacagccttatccagtgggctcccaccttggtagttcctcaact 809
Query: 833 gcaccagttgtaggtattactcccatggttagtccatatggacgatacaaaggtgatatg 892
||||||||||| || ||||| || | ||||| | |||||| |||||||||||||| ||
Sbjct: 810 gcaccagttgtggggattacgcctttaattagttcttatggaggatacaaaggtgatgtg 869
Query: 893 gtgggagattggccttctatataccaaccacggagggaggtgagctctccaaaagagttt 952
| |||||||||||||||||||| |||||||||||||||| ||||||| |||| || |||
Sbjct: 870 gctggagattggccttctatatatcaaccacggagggaggagagctctgcaaaggaattt 929
Query: 953 agcctgcgtctgctttgtgctgcggcgaatgtcggaggtgtgattggaaaaggaggtgga 1012
||| |||| || ||||||||||| | ||||| |||||||| |||||||| || ||||||
Sbjct: 930 agcttgcgccttctttgtgctgcatcaaatgtgggaggtgtaattggaaagggtggtgga 989
Query: 1013 attatcaaacagattaggcaagaatctggagcttttatcaaagtggatagttcgagtgct 1072
|||||||||||||||||||| || |||||||| ||||||||||| |||||||| | | ||
Sbjct: 990 attatcaaacagattaggcaggagtctggagcctttatcaaagttgatagttcaaatact 1049
Query: 1073 gaagatgactgcataattacagtttcggcaaaggagttctttgaggatcctgtctctcca 1132
|||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 1050 gaagatgactgcataattactgtttctgcaaaggagttctttgaagatcctgtctcccca 1109
Query: 1133 acaattgatgctacagttcgtttacagccaagatgcagcgagaaaattgatgcagaatcg 1192
||||| ||||| |||||| |||||| ||||||||||| ||||||| |||| | |||||
Sbjct: 1110 acaataaatgctgcagttcatttacaaccaagatgcagtgagaaaactgatccggaatca 1169
Query: 1193 ggggagccatcatacactacacgtttgttggtgtcgacatcacggatagggtgcctgatc 1252
| | || || ||||| ||||| |||||||||||||||||||| || |||||| ||||
Sbjct: 1170 gcgatcccgtcttacacaacacgcttgttggtgtcgacatcacgtattgggtgcttgatt 1229
Query: 1253 ggcaaaggtggttcaatcattacggagatacgaagaacatcgagagcaaacatacgaatc 1312
|| |||||||||||||||||||| |||||| | |||||||| |||||||||||||| |||
Sbjct: 1230 ggaaaaggtggttcaatcattactgagataaggagaacatcaagagcaaacatacgtatc 1289
Query: 1313 atttcaaagcaggatgttccaaaagtagcatccgacgatgaagagatggtcctgatcagc 1372
|||| ||| || |||| |||||||||||| | || || ||||||||||| | ||||||
Sbjct: 1290 ctttctaaggagaatgtaccaaaagtagcagcagaagacgaagagatggttcagatcagt 1349
Query: 1373 ggagatcttgattttgcaaggcatgctcttttgcaaataactacaaggctgaaagccaac 1432
||||| |||||| ||| ||| ||||||||| ||||||||||||| ||||||||||||||
Sbjct: 1350 ggagaccttgatgttgtaagacatgctcttctgcaaataactactaggctgaaagccaat 1409
Query: 1433 ttctttgaaagagaaggtgctttatcaggttttccacctgtgatccc 1479
|||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1410 ttctttgaaagagaaggtgctttatcaggtttcccacctgtaatccc 1456
Score = 135 bits (68), Expect = 7e-28
Identities = 121/135 (89%), Gaps = 4/135 (2%)
Strand = Plus / Plus
Query: 1831 gccaagactaatgaagtttggagcctgcttagtggagcccctacccaaaccagatgac-- 1888
|||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1925 gccaagaccaatgaagtatggagcctgcttattggagccccttcccaaaccagatgacca 1984
Query: 1889 tgagtatgg-cccaacctggaagctttgcttaaga-ggacctgtctggatgccacagacc 1946
|||||||| ||||||||||||||||||| ||||| ||||||| |||||||||| |||||
Sbjct: 1985 agagtatggccccaacctggaagctttgcctaagagggacctgcctggatgccatagacc 2044
Query: 1947 ctctgatttccctag 1961
||| ||||||||||
Sbjct: 2045 atcttatttccctag 2059
Score = 123 bits (62), Expect = 3e-24
Identities = 155/186 (83%)
Strand = Plus / Plus
Query: 1514 aagtatctaagcagagacaataagtctgctgggcatgactatccatattctagtggatat 1573
||||||||| ||||||| | |||| || ||||||||| ||||||||||| |||||||||
Sbjct: 1494 aagtatctaggcagagatactaagcctcttgggcatgattatccatattcaagtggatat 1553
Query: 1574 cgtgcatcagacgatgtgcttcctgttgaccgttatgcaaattatggcagctctcaggtc 1633
|||| ||||| ||| | ||| ||||| | ||||||| |||||||||||| ||||||
Sbjct: 1554 cgtggctcagatgatattggccctattgacagctatgcaagttatggcagctcccaggtc 1613
Query: 1634 tccggaggtggctatggtgcttacagtgggtacagtggtggttctggcagcagcgggtta 1693
|| ||||| || ||||| ||||| |||| || |||||| ||||||||||||| ||||||
Sbjct: 1614 tctggaggaggttatggggcttatggtggatatagtggtcgttctggcagcagtgggtta 1673
Query: 1694 tctggc 1699
||||||
Sbjct: 1674 tctggc 1679
Score = 56.0 bits (28), Expect = 5e-04
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 1760 cagctcagctctcttctgatgaacctgtccgtttcacatttgcacccctgcccaa-tccc 1818
|||||||||| |||||||||| |||||| | |||||| ||||| ||| |||||| ||||
Sbjct: 1838 cagctcagctatcttctgatggacctgttcttttcacctttgc-cccatgcccacctccc 1896
Query: 1819 ttaccgaaaacagccaagac 1838
|||| ||||||||||||||
Sbjct: 1897 ttactaaaaacagccaagac 1916
>dbj|AK065781.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013040N11, full
insert sequence
Length = 3152
Score = 1187 bits (599), Expect = 0.0
Identities = 1175/1367 (85%)
Strand = Plus / Plus
Query: 113 atggtcgggcctgggcaccggaacagtcatggaaagcggcagtctgattattctgaaaat 172
||||| || |||||||| |||||||||| || ||||| || ||||||||| ||||||||
Sbjct: 146 atggttggacctgggcataggaacagtcacgggaagcgtcactctgattatgctgaaaat 205
Query: 173 ggaggtggcaagagaagaaatcctggtgatgatacctatgctcctggtccagacgacact 232
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||
Sbjct: 206 ggaggtggcaagagaaggaatcctggtgatgatacatatgctcctggtccagatgatact 265
Query: 233 gtctatcgctacctctgcacgtctaggaaaatagggagtataattgggaggggtggagaa 292
||||| ||||| || ||| | ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 266 gtctaccgctatctttgcccttctagaaaaatagggagcatcattgggaggggtggagaa 325
Query: 293 attgccaagcagctcaggagcgatactcaagctaaaattaggattggtgagagtgtccct 352
||||| |||||| | ||| ||| ||||||||||| || ||||||||||||||||| ||
Sbjct: 326 attgctaagcagatgagggccgacactcaagctaagataaggattggtgagagtgtatct 385
Query: 353 gcctgcgatgaacgagtcataacaatatttagctcaagcagggagactaataccattgaa 412
| || ||||| |||| || ||||||||||||||||||||||| ||||||||| | | |
Sbjct: 386 ggttgtgatgagagagttatcacaatatttagctcaagcagggaaactaataccctagta 445
Query: 413 gatactgaagataaggtttgcccagctcaagatgctctctttagggttcatgagaagctt 472
||| ||||||||||||||||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 446 gatgctgaagataaggtttgccctgcccaagacgctctctttagagttcatgaaaagcta 505
Query: 473 gccacagatgatggtcctgtgaacaaagaaaatgaagagagtttaggtcaagttactgtt 532
||| |||||||| | || ||| |||||| ||| || |||||| ||||||||| |||
Sbjct: 506 tccatagatgatgatattgggaatgaagaaagtgatgaaggtttagctcaagttaccgtt 565
Query: 533 cggttgcttgtgccatctgatcagattggatgcattattggaaaaggtgggcatatcatc 592
||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct: 566 cggttgcttgtgccatcagaccagattggatgcattattggaaaaggtgggcatattata 625
Query: 593 cagggaatccgcagcgacactggttcacaaatacgagttcttagtaatgaacatcttcct 652
|||||||||||||| ||||||||| | || ||||| |||||||| |||||| |||| |||
Sbjct: 626 cagggaatccgcagtgacactggtgctcatatacgtgttcttagcaatgaaaatctccct 685
Query: 653 ctatgtgctactagtggtgatgaacttctcctgataactggggatccgatggtagttaga 712
||||| | ||||||||||||||||| | |||| ||||||| | | || || |||
Sbjct: 686 gcgtgtgccatcagtggtgatgaacttcttcagatatctggggactcaacagttgtcaga 745
Query: 713 aaagctcttctccaagtgtcatctcgcctccatggcaacccatccaggtcacagcatctt 772
||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||
Sbjct: 746 aaagctcttcttcaagtgtcatctcgtctccatgacaacccatctaggtcacagcatctt 805
Query: 773 cttgcgtccagcttaaaccaaccttttccagtgggctcccgccttggtagttcctctact 832
||||| |||||| | | || |||| |||||||||||||| ||||||||||||||| |||
Sbjct: 806 cttgcatccagcatgacacagccttatccagtgggctcccaccttggtagttcctcaact 865
Query: 833 gcaccagttgtaggtattactcccatggttagtccatatggacgatacaaaggtgatatg 892
||||||||||| || ||||| || | ||||| | |||||| |||||||||||||| ||
Sbjct: 866 gcaccagttgtggggattacgcctttaattagttcttatggaggatacaaaggtgatgtg 925
Query: 893 gtgggagattggccttctatataccaaccacggagggaggtgagctctccaaaagagttt 952
| |||||||||||||||||||| |||||||||||||||| ||||||| |||| || |||
Sbjct: 926 gctggagattggccttctatatatcaaccacggagggaggagagctctgcaaaggaattt 985
Query: 953 agcctgcgtctgctttgtgctgcggcgaatgtcggaggtgtgattggaaaaggaggtgga 1012
||| |||| || ||||||||||| | ||||| |||||||| |||||||| || ||||||
Sbjct: 986 agcttgcgccttctttgtgctgcatcaaatgtgggaggtgtaattggaaagggtggtgga 1045
Query: 1013 attatcaaacagattaggcaagaatctggagcttttatcaaagtggatagttcgagtgct 1072
|||||||||||||||||||| || |||||||| ||||||||||| |||||||| | | ||
Sbjct: 1046 attatcaaacagattaggcaggagtctggagcctttatcaaagttgatagttcaaatact 1105
Query: 1073 gaagatgactgcataattacagtttcggcaaaggagttctttgaggatcctgtctctcca 1132
|||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 1106 gaagatgactgcataattactgtttctgcaaaggagttctttgaagatcctgtctcccca 1165
Query: 1133 acaattgatgctacagttcgtttacagccaagatgcagcgagaaaattgatgcagaatcg 1192
||||| ||||| |||||| |||||| ||||||||||| ||||||| |||| | |||||
Sbjct: 1166 acaataaatgctgcagttcatttacaaccaagatgcagtgagaaaactgatccggaatca 1225
Query: 1193 ggggagccatcatacactacacgtttgttggtgtcgacatcacggatagggtgcctgatc 1252
| | || || ||||| ||||| |||||||||||||||||||| || |||||| ||||
Sbjct: 1226 gcgatcccgtcttacacaacacgcttgttggtgtcgacatcacgtattgggtgcttgatt 1285
Query: 1253 ggcaaaggtggttcaatcattacggagatacgaagaacatcgagagcaaacatacgaatc 1312
|| |||||||||||||||||||| |||||| | |||||||| |||||||||||||| |||
Sbjct: 1286 ggaaaaggtggttcaatcattactgagataaggagaacatcaagagcaaacatacgtatc 1345
Query: 1313 atttcaaagcaggatgttccaaaagtagcatccgacgatgaagagatggtcctgatcagc 1372
|||| ||| || |||| |||||||||||| | || || ||||||||||| | ||||||
Sbjct: 1346 ctttctaaggagaatgtaccaaaagtagcagcagaagacgaagagatggttcagatcagt 1405
Query: 1373 ggagatcttgattttgcaaggcatgctcttttgcaaataactacaaggctgaaagccaac 1432
||||| |||||| ||| ||| ||||||||| ||||||||||||| ||||||||||||||
Sbjct: 1406 ggagaccttgatgttgtaagacatgctcttctgcaaataactactaggctgaaagccaat 1465
Query: 1433 ttctttgaaagagaaggtgctttatcaggttttccacctgtgatccc 1479
|||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1466 ttctttgaaagagaaggtgctttatcaggtttcccacctgtaatccc 1512
Score = 135 bits (68), Expect = 7e-28
Identities = 121/135 (89%), Gaps = 4/135 (2%)
Strand = Plus / Plus
Query: 1831 gccaagactaatgaagtttggagcctgcttagtggagcccctacccaaaccagatgac-- 1888
|||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1981 gccaagaccaatgaagtatggagcctgcttattggagccccttcccaaaccagatgacca 2040
Query: 1889 tgagtatgg-cccaacctggaagctttgcttaaga-ggacctgtctggatgccacagacc 1946
|||||||| ||||||||||||||||||| ||||| ||||||| |||||||||| |||||
Sbjct: 2041 agagtatggccccaacctggaagctttgcctaagagggacctgcctggatgccatagacc 2100
Query: 1947 ctctgatttccctag 1961
||| ||||||||||
Sbjct: 2101 atcttatttccctag 2115
Score = 123 bits (62), Expect = 3e-24
Identities = 155/186 (83%)
Strand = Plus / Plus
Query: 1514 aagtatctaagcagagacaataagtctgctgggcatgactatccatattctagtggatat 1573
||||||||| ||||||| | |||| || ||||||||| ||||||||||| |||||||||
Sbjct: 1550 aagtatctaggcagagatactaagcctcttgggcatgattatccatattcaagtggatat 1609
Query: 1574 cgtgcatcagacgatgtgcttcctgttgaccgttatgcaaattatggcagctctcaggtc 1633
|||| ||||| ||| | ||| ||||| | ||||||| |||||||||||| ||||||
Sbjct: 1610 cgtggctcagatgatattggccctattgacagctatgcaagttatggcagctcccaggtc 1669
Query: 1634 tccggaggtggctatggtgcttacagtgggtacagtggtggttctggcagcagcgggtta 1693
|| ||||| || ||||| ||||| |||| || |||||| ||||||||||||| ||||||
Sbjct: 1670 tctggaggaggttatggggcttatggtggatatagtggtcgttctggcagcagtgggtta 1729
Query: 1694 tctggc 1699
||||||
Sbjct: 1730 tctggc 1735
Score = 56.0 bits (28), Expect = 5e-04
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 1760 cagctcagctctcttctgatgaacctgtccgtttcacatttgcacccctgcccaa-tccc 1818
|||||||||| |||||||||| |||||| | |||||| ||||| ||| |||||| ||||
Sbjct: 1894 cagctcagctatcttctgatggacctgttcttttcacctttgc-cccatgcccacctccc 1952
Query: 1819 ttaccgaaaacagccaagac 1838
|||| ||||||||||||||
Sbjct: 1953 ttactaaaaacagccaagac 1972
>gb|AY109452.1 | Zea mays CL2657_1 mRNA sequence
Length = 2231
Score = 563 bits (284), Expect = e-157
Identities = 708/853 (83%)
Strand = Plus / Minus
Query: 123 ctgggcaccggaacagtcatggaaagcggcagtctgattattctgaaaatggaggtggca 182
|||| ||||| ||||||||||||||||| |||||||||| | ||||||||||||| | |
Sbjct: 2126 ctggccaccgaaacagtcatggaaagcgccagtctgattttactgaaaatggaggcagta 2067
Query: 183 agagaagaaatcctggtgatgatacctatgctcctggtccagacgacactgtctatcgct 242
|||||||||||||||| |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 2066 agagaagaaatcctggcgatgatacatatgcacctggtcctgatgacactgtgtatcgct 2007
Query: 243 acctctgcacgtctaggaaaatagggagtataattgggaggggtggagaaattgccaagc 302
||||||| | ||||| | |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 2006 acctctgtgcctctagnnnnnttgggagtatcattggcaggggtggagaaattgcaaagc 1947
Query: 303 agctcaggagcgatactcaagctaaaattaggattggtgagagtgtccctgcctgcgatg 362
|| | |||| || || |||||||| || |||||||| ||||||||||||| || ||||
Sbjct: 1946 agttgaggactgagacccaagctaagatcaggattggcgagagtgtccctggatgtgatg 1887
Query: 363 aacgagtcataacaatatttagctcaagcagggagactaataccattgaagatactgaag 422
| ||||| | || ||||||||| |||||||| | ||||||||||| || | | ||||||
Sbjct: 1886 agcgagttgttaccatatttagcacaagcaggaaaactaataccatcgatggtgctgaag 1827
Query: 423 ataaggtttgcccagctcaagatgctctctttagggttcatgagaagcttgccacagatg 482
|| |||||||||| ||||| ||||| |||||||| |||||||||| |||||||| |||
Sbjct: 1826 atgaggtttgccctgctcaggatgccctctttagagttcatgagaggcttgccagttatg 1767
Query: 483 atggtcctgtgaacaaagaaaatgaagagagtttaggtcaagttactgttcggttgcttg 542
| |||| || |||| |||| | ||||| | || | ||||||||||||||| |||||||
Sbjct: 1766 agggtcttgggaacgaagacagcgaagaaatttcacctcaagttactgttcgcttgcttg 1707
Query: 543 tgccatctgatcagattggatgcattattggaaaaggtgggcatatcatccagggaatcc 602
||||||| || |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1706 tgccatcagaccagattggatgcattattggaaaaggtgggcagatcatccaaggaatcc 1647
Query: 603 gcagcgacactggttcacaaatacgagttcttagtaatgaacatcttcctctatgtgcta 662
|||| || |||||| |||||||||| || ||||||||||| ||| | || |||||| |
Sbjct: 1646 gcagtgagactggtgcacaaatacgtgtccttagtaatgatcatatccccgcatgtgcca 1587
Query: 663 ctagtggtgatgaacttctcctgataactggggatccgatggtagttagaaaagctcttc 722
|||||| || |||||||||| |||| ||||||| || | | || ||||| |||||||
Sbjct: 1586 ttagtggagacgaacttctccagatatctggggacacggtagntgtcagaaaggctcttc 1527
Query: 723 tccaagtgtcatctcgcctccatggcaacccatccaggtcacagcatcttcttgcgtcca 782
||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 1526 atcaagtgtcatctcgcctccataacaacccatccaagtcacagcatcttcttgcatcca 1467
Query: 783 gcttaaaccaaccttttccagtgggctcccgccttggtagttcctctactgcaccagttg 842
|||| | |||||||| ||||| | || ||| ||||||| |||||||||||||||| ||||
Sbjct: 1466 gcttgacccaaccttatccagggagcacccaccttggtggttcctctactgcacctgttg 1407
Query: 843 taggtattactcccatggttagtccatatggacgatacaaaggtgatatggtgggagatt 902
|||| || ||||| | || ||| ||| |||||||||||| | | |||||||
Sbjct: 1406 tagggatcactccagtaattcctccttatnnnnnctacaaaggtgatgtagcaggagatt 1347
Query: 903 ggccttctatataccaaccacggagggaggtgagctctccaaaagagtttagcctgcgtc 962
|||| ||| ||||||||||||| ||||| | ||||||| |||| ||||||||| |||||
Sbjct: 1346 ggccctctttataccaaccacgaagggatgagagctctgcaaaggagtttagcttgcgtt 1287
Query: 963 tgctttgtgctgc 975
| |||||||||||
Sbjct: 1286 tactttgtgctgc 1274
Score = 355 bits (179), Expect = 4e-94
Identities = 418/498 (83%), Gaps = 6/498 (1%)
Strand = Plus / Minus
Query: 1007 ggtggaattatcaaacagattaggcaagaatctggagcttttatcaaagtggatagttcg 1066
|||||||||||||||||||||||||| || ||||| ||||| |||||||||| ||| ||
Sbjct: 1242 ggtggaattatcaaacagattaggcaggagtctggggctttaatcaaagtggctagctcc 1183
Query: 1067 agtgc------tgaagatgactgcataattacagtttcggcaaaggagttctttgaggat 1120
| | | ||| ||||||||||||||||||||||| || || ||||||||||| |||
Sbjct: 1182 aattcagaccctgatgatgactgcataattacagtttctgcgaaagagttctttgaagat 1123
Query: 1121 cctgtctctccaacaattgatgctacagttcgtttacagccaagatgcagcgagaaaatt 1180
||||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||| |
Sbjct: 1122 cctgtatctccaacaattgatgctgcagttcgtttgcagcctagatgcagcgagaaaagt 1063
Query: 1181 gatgcagaatcgggggagccatcatacactacacgtttgttggtgtcgacatcacggata 1240
||| ||||| || |||| ||||| |||||||| ||| ||||||| |||||||| ||
Sbjct: 1062 gatttagaattggctgagcagtcatatactacacgcttgctggtgtcaacatcacgtatt 1003
Query: 1241 gggtgcctgatcggcaaaggtggttcaatcattacggagatacgaagaacatcgagagca 1300
|||||||| || ||||||||||| ||||||||||| |||||||| |||||||| |||||
Sbjct: 1002 gggtgcctaattggcaaaggtggctcaatcattactgagatacggagaacatccagagcc 943
Query: 1301 aacatacgaatcatttcaaagcaggatgttccaaaagtagcatccgacgatgaagagatg 1360
|| |||| || ||||||| | |||| ||||| |||||| | || ||||| ||||||
Sbjct: 942 aatgtacgtattctttcaaaagaaaatgtcccaaaggtagcagcagaagatgatgagatg 883
Query: 1361 gtcctgatcagcggagatcttgattttgcaaggcatgctcttttgcaaataactacaagg 1420
|| | ||| || |||| |||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 882 gttcagataagtggaggccttgatgttgcaaggcatgctcttgtgcaaatagctacaagg 823
Query: 1421 ctgaaagccaacttctttgaaagagaaggtgctttatcaggttttccacctgtgatccca 1480
||||||||||| |||||||||||||| || ||||||| | ||||||||||| |||||
Sbjct: 822 ctgaaagccaatttctttgaaagagagggctctttatctgcatttccacctgttatccct 763
Query: 1481 tatcaccctttgcctgct 1498
|| || ||||||||||||
Sbjct: 762 taccatcctttgcctgct 745
Score = 113 bits (57), Expect = 3e-21
Identities = 94/105 (89%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 1842 tgaagtttggagcctgcttagtggagcccctacccaaaccagatgactgagtatggccca 1901
|||||||||||||||||||| ||||| |||| ||||||||||||||| || | |||||
Sbjct: 406 tgaagtttggagcctgcttattggagtcccttcccaaaccagatgaccaag-agagccca 348
Query: 1902 acctggaagctttgcttaagaggacctgtctggatgccacagacc 1946
|||||||||||||||||||||||||| || ||||||||| |||||
Sbjct: 347 acctggaagctttgcttaagaggacccgtgtggatgccatagacc 303
Score = 85.7 bits (43), Expect = 6e-13
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 1842 tgaagtttggagcctgcttagtggagcccctacccaaaccagatgactgagtatggccca 1901
|||||||||||||||||||| |||||||||| ||||||||||||||| || | |||||
Sbjct: 74 tgaagtttggagcctgcttattggagccccttcccaaaccagatgaccaag-agagccca 16
Query: 1902 acctggaagctttgc 1916
|||||||||||||||
Sbjct: 15 acctggaagctttgc 1
Score = 56.0 bits (28), Expect = 5e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2006 gccctgccgtaaatgttctgaacccatgtattggaaggtc 2045
||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 250 gccctgccgcaaatgttctgaacctatgtattgaaaggtc 211
>gb|BT023962.1 | Zea mays clone EL01N0412B07 mRNA sequence
Length = 2075
Score = 525 bits (265), Expect = e-145
Identities = 649/776 (83%), Gaps = 7/776 (0%)
Strand = Plus / Plus
Query: 730 gtcatctcgcctccatggcaacccatccaggtcacagcatcttcttgcgtccagcttaaa 789
|||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |
Sbjct: 737 gtcatctcgcctccataacaacccatccaagtcacagcatcttcttgcatccagcttgac 796
Query: 790 cc-aaccttttccagtgggctcccgccttggtagttcctctactgcaccagttgtaggta 848
|| |||||| ||||| | || ||| ||||||| |||||||||||||||| |||||||| |
Sbjct: 797 cccaaccttatccagggagcacccaccttggtggttcctctactgcacctgttgtaggga 856
Query: 849 ttactcccatggttagtccatatggacgatacaaaggtgatatggtgggagattggcctt 908
| ||||| | || ||| |||||| | |||||||||||| | | ||||||||||| |
Sbjct: 857 tcactccagtaattcctccttatggaggctacaaaggtgatgtagcaggagattggccct 916
Query: 909 ctatataccaaccacggagggaggtgagctctccaaaagagtttagcctgcgtctgcttt 968
|| ||||||||||||| ||||| | ||||||| |||| ||||||||| ||||| | ||||
Sbjct: 917 ctttataccaaccacgaagggatgagagctctgcaaaggagtttagcttgcgtttacttt 976
Query: 969 gtgctgcggcgaatgtcggaggtgtgattggaaaaggaggtggaattatcaaacagatta 1028
||||||| || ||||| || ||||| ||||| || || ||||||||||||||||||||||
Sbjct: 977 gtgctgctgcaaatgtggggggtgtaattgggaagggtggtggaattatcaaacagatta 1036
Query: 1029 ggcaagaatctggagcttttatcaaagtggatagttcgagtgc------tgaagatgact 1082
|||| || ||||| ||||| |||||||||| ||| || | | | ||| |||||||
Sbjct: 1037 ggcaggagtctggggctttaatcaaagtggctagctccaattcagaccctgatgatgact 1096
Query: 1083 gcataattacagtttcggcaaaggagttctttgaggatcctgtctctccaacaattgatg 1142
|||||||||||||||| || || ||||||||||| |||||||| ||||||||||||||||
Sbjct: 1097 gcataattacagtttctgcgaaagagttctttgaagatcctgtatctccaacaattgatg 1156
Query: 1143 ctacagttcgtttacagccaagatgcagcgagaaaattgatgcagaatcgggggagccat 1202
|| |||||||||| ||||| |||||||||||||||| |||| |||||| | |||| |
Sbjct: 1157 ctgcagttcgtttgcagcctagatgcagcgagaaaaatgatttagaatcagctgagcagt 1216
Query: 1203 catacactacacgtttgttggtgtcgacatcacggatagggtgcctgatcggcaaaggtg 1262
||||||| ||||| || ||||||| |||||||| || |||||||| || ||||||||||
Sbjct: 1217 catacacaacacgcctgctggtgtcaacatcacgtattgggtgcctaattggcaaaggtg 1276
Query: 1263 gttcaatcattacggagatacgaagaacatcgagagcaaacatacgaatcatttcaaagc 1322
||||||||||||| |||||||| |||||||| |||||||| |||| || |||||||
Sbjct: 1277 gttcaatcattactgagatacggagaacatccagagcaaatgtacgcattctttcaaaag 1336
Query: 1323 aggatgttccaaaagtagcatccgacgatgaagagatggtcctgatcagcggagatcttg 1382
| |||||||||| |||||| | || ||||| |||||||| | ||||| |||| ||||
Sbjct: 1337 aaaatgttccaaaggtagcagcagaagatgacgagatggttcagatcactggaggccttg 1396
Query: 1383 attttgcaaggcatgctcttttgcaaataactacaaggctgaaagccaacttctttgaaa 1442
|| ||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 1397 atgttgcaagaaatgctcttgtgcaaatagctacaaggctgaaagccaatttctttgaaa 1456
Query: 1443 gagaaggtgctttatcaggttttccacctgtgatcccatatcaccctttgcctgct 1498
|||| || ||||||| | ||||||||||| ||||| || || ||||||||||||
Sbjct: 1457 gagagggctctttatctgcatttccacctgttatcccttaccatcctttgcctgct 1512
Score = 444 bits (224), Expect = e-121
Identities = 446/520 (85%)
Strand = Plus / Plus
Query: 123 ctgggcaccggaacagtcatggaaagcggcagtctgattattctgaaaatggaggtggca 182
|||| ||||| ||||||||||||||||| |||||||||| | ||||||||||||| || |
Sbjct: 127 ctggccaccgaaacagtcatggaaagcgccagtctgattttactgaaaatggaggcggta 186
Query: 183 agagaagaaatcctggtgatgatacctatgctcctggtccagacgacactgtctatcgct 242
|||||||||||||||| |||||||| ||||| |||||||| || |||||||| |||||||
Sbjct: 187 agagaagaaatcctggcgatgatacatatgcacctggtcctgatgacactgtgtatcgct 246
Query: 243 acctctgcacgtctaggaaaatagggagtataattgggaggggtggagaaattgccaagc 302
||||||| | ||||| ||||| |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 247 acctctgtgcctctagaaaaattgggagtatcattggcaggggtggagaaattgcaaagc 306
Query: 303 agctcaggagcgatactcaagctaaaattaggattggtgagagtgtccctgcctgcgatg 362
|| | |||| || || |||||||| || |||||||| ||||||||||||| || ||||
Sbjct: 307 agttgaggactgagacccaagctaagatcaggattggcgagagtgtccctggatgtgatg 366
Query: 363 aacgagtcataacaatatttagctcaagcagggagactaataccattgaagatactgaag 422
| ||||| || || ||||||||| |||||||| | ||||||||||| || | | ||||||
Sbjct: 367 agcgagttattaccatatttagcacaagcaggaaaactaataccatcgatggtgctgaag 426
Query: 423 ataaggtttgcccagctcaagatgctctctttagggttcatgagaagcttgccacagatg 482
|| |||||||||| ||||| ||||| |||||||| |||||||||| |||||||| ||||
Sbjct: 427 atgaggtttgccctgctcaggatgccctctttagagttcatgagaggcttgccagtgatg 486
Query: 483 atggtcctgtgaacaaagaaaatgaagagagtttaggtcaagttactgttcggttgcttg 542
| |||| || |||| |||| | ||||| | || | ||||||||||||||| |||||||
Sbjct: 487 agggtcttgggaacgaagacagcgaagaaatttcacctcaagttactgttcgcttgcttg 546
Query: 543 tgccatctgatcagattggatgcattattggaaaaggtgggcatatcatccagggaatcc 602
||||||| || |||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 547 tgccatcagaccagattggatgcattattggaaaaggtgggcagatcatccaaggaatcc 606
Query: 603 gcagcgacactggttcacaaatacgagttcttagtaatga 642
|||| || |||||| |||||||||| || |||||||||||
Sbjct: 607 gcagtgagactggtgcacaaatacgtgtccttagtaatga 646
Score = 123 bits (62), Expect = 3e-24
Identities = 106/118 (89%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 1829 cagccaagactaatgaagtttggagcctgcttagtggagcccctacccaaaccagatgac 1888
|||||||||| | |||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1774 cagccaagac-attgaagtttggagcctgcttattggagccccttcccaaaccagatgac 1832
Query: 1889 tgagtatggcccaacctggaagctttgcttaagaggacctgtctggatgccacagacc 1946
|| | ||||||||||||||||||||||||||||||| || ||||||||| |||||
Sbjct: 1833 caag-agagcccaacctggaagctttgcttaagaggacccgtgtggatgccatagacc 1889
Score = 56.0 bits (28), Expect = 5e-04
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 2006 gccctgccgtaaatgttctgaacccatgtattggaaggtc 2045
||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1942 gccctgccgcaaatgttctgaacctatgtattgaaaggtc 1981
>gb|AC084766.8 | Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete
sequence
Length = 130306
Score = 486 bits (245), Expect = e-133
Identities = 488/569 (85%)
Strand = Plus / Minus
Query: 113 atggtcgggcctgggcaccggaacagtcatggaaagcggcagtctgattattctgaaaat 172
||||| || |||||||| |||||||||| || ||||| || ||||||||| ||||||||
Sbjct: 52892 atggttggacctgggcataggaacagtcacgggaagcgtcactctgattatgctgaaaat 52833
Query: 173 ggaggtggcaagagaagaaatcctggtgatgatacctatgctcctggtccagacgacact 232
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||
Sbjct: 52832 ggaggtggcaagagaaggaatcctggtgatgatacatatgctcctggtccagatgatact 52773
Query: 233 gtctatcgctacctctgcacgtctaggaaaatagggagtataattgggaggggtggagaa 292
||||| ||||| || ||| | ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 52772 gtctaccgctatctttgcccttctagaaaaatagggagcatcattgggaggggtggagaa 52713
Query: 293 attgccaagcagctcaggagcgatactcaagctaaaattaggattggtgagagtgtccct 352
||||| |||||| | ||| ||| ||||||||||| || ||||||||||||||||| ||
Sbjct: 52712 attgctaagcagatgagggccgacactcaagctaagataaggattggtgagagtgtatct 52653
Query: 353 gcctgcgatgaacgagtcataacaatatttagctcaagcagggagactaataccattgaa 412
| || ||||| |||| || ||||||||||||||||||||||| ||||||||| | | |
Sbjct: 52652 ggttgtgatgagagagttatcacaatatttagctcaagcagggaaactaataccctagta 52593
Query: 413 gatactgaagataaggtttgcccagctcaagatgctctctttagggttcatgagaagctt 472
||| ||||||||||||||||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 52592 gatgctgaagataaggtttgccctgcccaagacgctctctttagagttcatgaaaagcta 52533
Query: 473 gccacagatgatggtcctgtgaacaaagaaaatgaagagagtttaggtcaagttactgtt 532
||| |||||||| | || ||| |||||| ||| || |||||| ||||||||| |||
Sbjct: 52532 tccatagatgatgatattgggaatgaagaaagtgatgaaggtttagctcaagttaccgtt 52473
Query: 533 cggttgcttgtgccatctgatcagattggatgcattattggaaaaggtgggcatatcatc 592
||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct: 52472 cggttgcttgtgccatcagaccagattggatgcattattggaaaaggtgggcatattata 52413
Query: 593 cagggaatccgcagcgacactggttcacaaatacgagttcttagtaatgaacatcttcct 652
|||||||||||||| ||||||||| | || ||||| |||||||| |||||| |||| |||
Sbjct: 52412 cagggaatccgcagtgacactggtgctcatatacgtgttcttagcaatgaaaatctccct 52353
Query: 653 ctatgtgctactagtggtgatgaacttct 681
||||| | |||||||||||||||||
Sbjct: 52352 gcgtgtgccatcagtggtgatgaacttct 52324
Score = 394 bits (199), Expect = e-106
Identities = 349/399 (87%)
Strand = Plus / Minus
Query: 710 agaaaagctcttctccaagtgtcatctcgcctccatggcaacccatccaggtcacagcat 769
|||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 51983 agaaaagctcttcttcaagtgtcatctcgtctccatgacaacccatctaggtcacagcat 51924
Query: 770 cttcttgcgtccagcttaaaccaaccttttccagtgggctcccgccttggtagttcctct 829
|||||||| |||||| | | || |||| |||||||||||||| |||||||||||||||
Sbjct: 51923 cttcttgcatccagcatgacacagccttatccagtgggctcccaccttggtagttcctca 51864
Query: 830 actgcaccagttgtaggtattactcccatggttagtccatatggacgatacaaaggtgat 889
|||||||||||||| || ||||| || | ||||| | |||||| ||||||||||||||
Sbjct: 51863 actgcaccagttgtggggattacgcctttaattagttcttatggaggatacaaaggtgat 51804
Query: 890 atggtgggagattggccttctatataccaaccacggagggaggtgagctctccaaaagag 949
||| |||||||||||||||||||| |||||||||||||||| ||||||| |||| ||
Sbjct: 51803 gtggctggagattggccttctatatatcaaccacggagggaggagagctctgcaaaggaa 51744
Query: 950 tttagcctgcgtctgctttgtgctgcggcgaatgtcggaggtgtgattggaaaaggaggt 1009
|||||| |||| || ||||||||||| | ||||| |||||||| |||||||| || |||
Sbjct: 51743 tttagcttgcgccttctttgtgctgcatcaaatgtgggaggtgtaattggaaagggtggt 51684
Query: 1010 ggaattatcaaacagattaggcaagaatctggagcttttatcaaagtggatagttcgagt 1069
||||||||||||||||||||||| || |||||||| ||||||||||| |||||||| | |
Sbjct: 51683 ggaattatcaaacagattaggcaggagtctggagcctttatcaaagttgatagttcaaat 51624
Query: 1070 gctgaagatgactgcataattacagtttcggcaaaggag 1108
|||||||||||||||||||||| ||||| |||||||||
Sbjct: 51623 actgaagatgactgcataattactgtttctgcaaaggag 51585
Score = 198 bits (100), Expect = 6e-47
Identities = 217/256 (84%)
Strand = Plus / Minus
Query: 1107 agttctttgaggatcctgtctctccaacaattgatgctacagttcgtttacagccaagat 1166
|||||||||| ||||||||||| |||||||| ||||| |||||| |||||| |||||||
Sbjct: 51494 agttctttgaagatcctgtctccccaacaataaatgctgcagttcatttacaaccaagat 51435
Query: 1167 gcagcgagaaaattgatgcagaatcgggggagccatcatacactacacgtttgttggtgt 1226
|||| ||||||| |||| | ||||| | | || || ||||| ||||| ||||||||||
Sbjct: 51434 gcagtgagaaaactgatccggaatcagcgatcccgtcttacacaacacgcttgttggtgt 51375
Query: 1227 cgacatcacggatagggtgcctgatcggcaaaggtggttcaatcattacggagatacgaa 1286
|||||||||| || |||||| |||| || |||||||||||||||||||| |||||| | |
Sbjct: 51374 cgacatcacgtattgggtgcttgattggaaaaggtggttcaatcattactgagataagga 51315
Query: 1287 gaacatcgagagcaaacatacgaatcatttcaaagcaggatgttccaaaagtagcatccg 1346
||||||| |||||||||||||| ||| |||| ||| || |||| |||||||||||| | |
Sbjct: 51314 gaacatcaagagcaaacatacgtatcctttctaaggagaatgtaccaaaagtagcagcag 51255
Query: 1347 acgatgaagagatggt 1362
| || |||||||||||
Sbjct: 51254 aagacgaagagatggt 51239
Score = 147 bits (74), Expect = 2e-31
Identities = 104/114 (91%)
Strand = Plus / Minus
Query: 1366 gatcagcggagatcttgattttgcaaggcatgctcttttgcaaataactacaaggctgaa 1425
|||||| ||||| |||||| ||| ||| ||||||||| ||||||||||||| ||||||||
Sbjct: 51149 gatcagtggagaccttgatgttgtaagacatgctcttctgcaaataactactaggctgaa 51090
Query: 1426 agccaacttctttgaaagagaaggtgctttatcaggttttccacctgtgatccc 1479
|||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 51089 agccaatttctttgaaagagaaggtgctttatcaggtttcccacctgtaatccc 51036
Score = 135 bits (68), Expect = 7e-28
Identities = 121/135 (89%), Gaps = 4/135 (2%)
Strand = Plus / Minus
Query: 1831 gccaagactaatgaagtttggagcctgcttagtggagcccctacccaaaccagatgac-- 1888
|||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 50294 gccaagaccaatgaagtatggagcctgcttattggagccccttcccaaaccagatgacca 50235
Query: 1889 tgagtatgg-cccaacctggaagctttgcttaaga-ggacctgtctggatgccacagacc 1946
|||||||| ||||||||||||||||||| ||||| ||||||| |||||||||| |||||
Sbjct: 50234 agagtatggccccaacctggaagctttgcctaagagggacctgcctggatgccatagacc 50175
Query: 1947 ctctgatttccctag 1961
||| ||||||||||
Sbjct: 50174 atcttatttccctag 50160
Score = 69.9 bits (35), Expect = 4e-08
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 1514 aagtatctaagcagagacaataagtctgctgggcatgactatccatattctagtggatat 1573
||||||||| ||||||| | |||| || ||||||||| ||||||||||| |||||||||
Sbjct: 50998 aagtatctaggcagagatactaagcctcttgggcatgattatccatattcaagtggatat 50939
Query: 1574 cgtgcatcagacgatgtgcttcctgttgaccgttatgcaaattatggcagctctcaggt 1632
|||| ||||| ||| | ||| ||||| | ||||||| |||||||||||| |||||
Sbjct: 50938 cgtggctcagatgatattggccctattgacagctatgcaagttatggcagctcccaggt 50880
Score = 56.0 bits (28), Expect = 5e-04
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 1760 cagctcagctctcttctgatgaacctgtccgtttcacatttgcacccctgcccaa-tccc 1818
|||||||||| |||||||||| |||||| | |||||| ||||| ||| |||||| ||||
Sbjct: 50381 cagctcagctatcttctgatggacctgttcttttcacctttgc-cccatgcccacctccc 50323
Query: 1819 ttaccgaaaacagccaagac 1838
|||| ||||||||||||||
Sbjct: 50322 ttactaaaaacagccaagac 50303
Score = 48.1 bits (24), Expect = 0.13
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 1628 caggtctccggaggtggctatggtgcttacagtgggtacagtggtggttctggcagcagc 1687
|||||||| ||||| || ||||| ||||| |||| || |||||| |||||||||||||
Sbjct: 50803 caggtctctggaggaggttatggggcttatggtggatatagtggtcgttctggcagcagt 50744
Query: 1688 gggt 1691
||||
Sbjct: 50743 gggt 50740
>dbj|AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
Length = 36192742
Score = 486 bits (245), Expect = e-133
Identities = 488/569 (85%)
Strand = Plus / Minus
Query: 113 atggtcgggcctgggcaccggaacagtcatggaaagcggcagtctgattattctgaaaat 172
||||| || |||||||| |||||||||| || ||||| || ||||||||| ||||||||
Sbjct: 14708514 atggttggacctgggcataggaacagtcacgggaagcgtcactctgattatgctgaaaat 14708455
Query: 173 ggaggtggcaagagaagaaatcctggtgatgatacctatgctcctggtccagacgacact 232
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||
Sbjct: 14708454 ggaggtggcaagagaaggaatcctggtgatgatacatatgctcctggtccagatgatact 14708395
Query: 233 gtctatcgctacctctgcacgtctaggaaaatagggagtataattgggaggggtggagaa 292
||||| ||||| || ||| | ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 14708394 gtctaccgctatctttgcccttctagaaaaatagggagcatcattgggaggggtggagaa 14708335
Query: 293 attgccaagcagctcaggagcgatactcaagctaaaattaggattggtgagagtgtccct 352
||||| |||||| | ||| ||| ||||||||||| || ||||||||||||||||| ||
Sbjct: 14708334 attgctaagcagatgagggccgacactcaagctaagataaggattggtgagagtgtatct 14708275
Query: 353 gcctgcgatgaacgagtcataacaatatttagctcaagcagggagactaataccattgaa 412
| || ||||| |||| || ||||||||||||||||||||||| ||||||||| | | |
Sbjct: 14708274 ggttgtgatgagagagttatcacaatatttagctcaagcagggaaactaataccctagta 14708215
Query: 413 gatactgaagataaggtttgcccagctcaagatgctctctttagggttcatgagaagctt 472
||| ||||||||||||||||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 14708214 gatgctgaagataaggtttgccctgcccaagacgctctctttagagttcatgaaaagcta 14708155
Query: 473 gccacagatgatggtcctgtgaacaaagaaaatgaagagagtttaggtcaagttactgtt 532
||| |||||||| | || ||| |||||| ||| || |||||| ||||||||| |||
Sbjct: 14708154 tccatagatgatgatattgggaatgaagaaagtgatgaaggtttagctcaagttaccgtt 14708095
Query: 533 cggttgcttgtgccatctgatcagattggatgcattattggaaaaggtgggcatatcatc 592
||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct: 14708094 cggttgcttgtgccatcagaccagattggatgcattattggaaaaggtgggcatattata 14708035
Query: 593 cagggaatccgcagcgacactggttcacaaatacgagttcttagtaatgaacatcttcct 652
|||||||||||||| ||||||||| | || ||||| |||||||| |||||| |||| |||
Sbjct: 14708034 cagggaatccgcagtgacactggtgctcatatacgtgttcttagcaatgaaaatctccct 14707975
Query: 653 ctatgtgctactagtggtgatgaacttct 681
||||| | |||||||||||||||||
Sbjct: 14707974 gcgtgtgccatcagtggtgatgaacttct 14707946
Score = 394 bits (199), Expect = e-106
Identities = 349/399 (87%)
Strand = Plus / Minus
Query: 710 agaaaagctcttctccaagtgtcatctcgcctccatggcaacccatccaggtcacagcat 769
|||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 14707605 agaaaagctcttcttcaagtgtcatctcgtctccatgacaacccatctaggtcacagcat 14707546
Query: 770 cttcttgcgtccagcttaaaccaaccttttccagtgggctcccgccttggtagttcctct 829
|||||||| |||||| | | || |||| |||||||||||||| |||||||||||||||
Sbjct: 14707545 cttcttgcatccagcatgacacagccttatccagtgggctcccaccttggtagttcctca 14707486
Query: 830 actgcaccagttgtaggtattactcccatggttagtccatatggacgatacaaaggtgat 889
|||||||||||||| || ||||| || | ||||| | |||||| ||||||||||||||
Sbjct: 14707485 actgcaccagttgtggggattacgcctttaattagttcttatggaggatacaaaggtgat 14707426
Query: 890 atggtgggagattggccttctatataccaaccacggagggaggtgagctctccaaaagag 949
||| |||||||||||||||||||| |||||||||||||||| ||||||| |||| ||
Sbjct: 14707425 gtggctggagattggccttctatatatcaaccacggagggaggagagctctgcaaaggaa 14707366
Query: 950 tttagcctgcgtctgctttgtgctgcggcgaatgtcggaggtgtgattggaaaaggaggt 1009
|||||| |||| || ||||||||||| | ||||| |||||||| |||||||| || |||
Sbjct: 14707365 tttagcttgcgccttctttgtgctgcatcaaatgtgggaggtgtaattggaaagggtggt 14707306
Query: 1010 ggaattatcaaacagattaggcaagaatctggagcttttatcaaagtggatagttcgagt 1069
||||||||||||||||||||||| || |||||||| ||||||||||| |||||||| | |
Sbjct: 14707305 ggaattatcaaacagattaggcaggagtctggagcctttatcaaagttgatagttcaaat 14707246
Query: 1070 gctgaagatgactgcataattacagtttcggcaaaggag 1108
|||||||||||||||||||||| ||||| |||||||||
Sbjct: 14707245 actgaagatgactgcataattactgtttctgcaaaggag 14707207
Score = 198 bits (100), Expect = 6e-47
Identities = 217/256 (84%)
Strand = Plus / Minus
Query: 1107 agttctttgaggatcctgtctctccaacaattgatgctacagttcgtttacagccaagat 1166
|||||||||| ||||||||||| |||||||| ||||| |||||| |||||| |||||||
Sbjct: 14707116 agttctttgaagatcctgtctccccaacaataaatgctgcagttcatttacaaccaagat 14707057
Query: 1167 gcagcgagaaaattgatgcagaatcgggggagccatcatacactacacgtttgttggtgt 1226
|||| ||||||| |||| | ||||| | | || || ||||| ||||| ||||||||||
Sbjct: 14707056 gcagtgagaaaactgatccggaatcagcgatcccgtcttacacaacacgcttgttggtgt 14706997
Query: 1227 cgacatcacggatagggtgcctgatcggcaaaggtggttcaatcattacggagatacgaa 1286
|||||||||| || |||||| |||| || |||||||||||||||||||| |||||| | |
Sbjct: 14706996 cgacatcacgtattgggtgcttgattggaaaaggtggttcaatcattactgagataagga 14706937
Query: 1287 gaacatcgagagcaaacatacgaatcatttcaaagcaggatgttccaaaagtagcatccg 1346
||||||| |||||||||||||| ||| |||| ||| || |||| |||||||||||| | |
Sbjct: 14706936 gaacatcaagagcaaacatacgtatcctttctaaggagaatgtaccaaaagtagcagcag 14706877
Query: 1347 acgatgaagagatggt 1362
| || |||||||||||
Sbjct: 14706876 aagacgaagagatggt 14706861
Score = 147 bits (74), Expect = 2e-31
Identities = 104/114 (91%)
Strand = Plus / Minus
Query: 1366 gatcagcggagatcttgattttgcaaggcatgctcttttgcaaataactacaaggctgaa 1425
|||||| ||||| |||||| ||| ||| ||||||||| ||||||||||||| ||||||||
Sbjct: 14706771 gatcagtggagaccttgatgttgtaagacatgctcttctgcaaataactactaggctgaa 14706712
Query: 1426 agccaacttctttgaaagagaaggtgctttatcaggttttccacctgtgatccc 1479
|||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 14706711 agccaatttctttgaaagagaaggtgctttatcaggtttcccacctgtaatccc 14706658
Score = 135 bits (68), Expect = 7e-28
Identities = 121/135 (89%), Gaps = 4/135 (2%)
Strand = Plus / Minus
Query: 1831 gccaagactaatgaagtttggagcctgcttagtggagcccctacccaaaccagatgac-- 1888
|||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 14705916 gccaagaccaatgaagtatggagcctgcttattggagccccttcccaaaccagatgacca 14705857
Query: 1889 tgagtatgg-cccaacctggaagctttgcttaaga-ggacctgtctggatgccacagacc 1946
|||||||| ||||||||||||||||||| ||||| ||||||| |||||||||| |||||
Sbjct: 14705856 agagtatggccccaacctggaagctttgcctaagagggacctgcctggatgccatagacc 14705797
Query: 1947 ctctgatttccctag 1961
||| ||||||||||
Sbjct: 14705796 atcttatttccctag 14705782
Score = 69.9 bits (35), Expect = 4e-08
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 1514 aagtatctaagcagagacaataagtctgctgggcatgactatccatattctagtggatat 1573
||||||||| ||||||| | |||| || ||||||||| ||||||||||| |||||||||
Sbjct: 14706620 aagtatctaggcagagatactaagcctcttgggcatgattatccatattcaagtggatat 14706561
Query: 1574 cgtgcatcagacgatgtgcttcctgttgaccgttatgcaaattatggcagctctcaggt 1632
|||| ||||| ||| | ||| ||||| | ||||||| |||||||||||| |||||
Sbjct: 14706560 cgtggctcagatgatattggccctattgacagctatgcaagttatggcagctcccaggt 14706502
Score = 56.0 bits (28), Expect = 5e-04
Identities = 69/80 (86%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 1760 cagctcagctctcttctgatgaacctgtccgtttcacatttgcacccctgcccaa-tccc 1818
|||||||||| |||||||||| |||||| | |||||| ||||| ||| |||||| ||||
Sbjct: 14706003 cagctcagctatcttctgatggacctgttcttttcacctttgc-cccatgcccacctccc 14705945
Query: 1819 ttaccgaaaacagccaagac 1838
|||| ||||||||||||||
Sbjct: 14705944 ttactaaaaacagccaagac 14705925
Score = 48.1 bits (24), Expect = 0.13
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 1628 caggtctccggaggtggctatggtgcttacagtgggtacagtggtggttctggcagcagc 1687
|||||||| ||||| || ||||| ||||| |||| || |||||| |||||||||||||
Sbjct: 14706425 caggtctctggaggaggttatggggcttatggtggatatagtggtcgttctggcagcagt 14706366
Query: 1688 gggt 1691
||||
Sbjct: 14706365 gggt 14706362
>gb|U79580.2 |PAU79580 Pseudomonas aeruginosa pilK gene, partial sequence; and ChpA (chpA),
ChpB (chpB), ChpC (chpC), ChpD (chpD), and ChpE (chpE)
genes, complete cds
Length = 11911
Score = 44.1 bits (22), Expect = 2.0
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 ccggcggccggcgcgatcatgg 116
||||||||||||||||||||||
Sbjct: 5446 ccggcggccggcgcgatcatgg 5467
>emb|AL008723.8 |HS90G24 Human DNA sequence from clone RP1-90G24 on chromosome 22 Contains the
5' end of a novel gene, the RFPL2 gene for ret finger
protein-like 2, a Immunoglobulin Lambda Light Chain C
region (IGLC) pseudogene (IGLCOR22-1), the SLC5A4 gene for
solute carrier family 5 (low affinity glucose
cotransporter), member 4 and a pseudogene similar to part
of cleavage and polyadenylation specific factor 1, 160kDa
(CPSF1), complete sequence
Length = 154414
Score = 42.1 bits (21), Expect = 8.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 714 aagctcttctccaagtgtcat 734
|||||||||||||||||||||
Sbjct: 56050 aagctcttctccaagtgtcat 56070
>emb|AL671321.16 | Mouse DNA sequence from clone RP23-274I19 on chromosome X, complete
sequence
Length = 234316
Score = 42.1 bits (21), Expect = 8.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 369 tcataacaatatttagctcaa 389
|||||||||||||||||||||
Sbjct: 162956 tcataacaatatttagctcaa 162976
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 366,074,451
Number of extensions: 18836310
Number of successful extensions: 89914
Number of sequences better than 10.0: 60
Number of HSP's gapped: 89852
Number of HSP's successfully gapped: 105
Length of query: 2091
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2068
Effective length of database: 18,503,978,556
Effective search space: 38266227653808
Effective search space used: 38266227653808
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)