ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf97a07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104982:Os03g0100200 | 36 | 0.035 | 2 | AK072547:Os03g0100200 | 36 | 0.035 | 3 | Os08g0133700:Os08g0133700 | 33 | 0.17 | 4 | AK101690:Os03g0225700 | 33 | 0.23 | 5 | AK063542:Os06g0710800 | 32 | 0.66 | 6 | AK111295:Os11g0671100 | 30 | 1.9 | 7 | Os04g0388600:Os04g0388600 | 30 | 2.5 | 8 | AK120070:Os02g0150700 | 30 | 2.5 | 9 | AK066069:Os06g0695600 | 30 | 2.5 | 10 | AK073733:Os01g0938600 | 29 | 4.3 | 11 | AK073705:Os06g0138200 | 29 | 4.3 | 12 | AK058914:Os06g0138200 | 29 | 4.3 | 13 | AK110366: | 28 | 5.6 | 14 | AK065766:Os05g0564300 | 28 | 5.6 | 15 | AK109511:Os04g0129300 | 28 | 5.6 | 16 | AK101247:Os09g0441900 | 24 | 7.0 | 17 | AK120499:Os09g0265800 | 28 | 7.3 | 18 | AK119834:Os08g0561800 | 28 | 7.3 | 19 | AK103582:Os04g0464200 | 28 | 7.3 | 20 | AK110018: | 28 | 9.5 | 21 | AK107851:Os10g0551700 | 28 | 9.5 | 22 | AK105001:Os09g0542100 | 28 | 9.5 |
|---|
>AK104982:Os03g0100200 | Length = 203 Score = 35.8 bits (81), Expect = 0.035 Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 21/84 (25%) Frame = +3 Query: 375 PCRGGYRRTWWIW------CGHCSPGGCR------RACW---------SPTRSPAACGPA 491 PC G R WW W +P R R CW S RSP C P+ Sbjct: 48 PCGGSKRAWWWPWPTCWATLARATPSRRRSRATSARGCWATSTPSTTSSSPRSP--CSPS 105 Query: 492 RLAPSSWGENLISRKSSLLTPSVT 563 R +PSS L R S+L TP+ + Sbjct: 106 RASPSS----LTPRPSTLPTPAAS 125
>AK072547:Os03g0100200 | Length = 203 Score = 35.8 bits (81), Expect = 0.035 Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 21/84 (25%) Frame = +3 Query: 375 PCRGGYRRTWWIW------CGHCSPGGCR------RACW---------SPTRSPAACGPA 491 PC G R WW W +P R R CW S RSP C P+ Sbjct: 48 PCGGSKRAWWWPWPTCWATLARATPSRRRSRATSARGCWATSTPSTTSSSPRSP--CSPS 105 Query: 492 RLAPSSWGENLISRKSSLLTPSVT 563 R +PSS L R S+L TP+ + Sbjct: 106 RASPSS----LTPRPSTLPTPAAS 125
>Os08g0133700:Os08g0133700 | Length = 1391 Score = 33.5 bits (75), Expect = 0.17 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Frame = +3 Query: 438 CRRACWSPTRSPAACGPARLAPSS--W--GENLISRKSSLLTPSVTQIVFW--RIHPW 593 CRR CW+ T SP AC R SS W G + + L P+V+ W R+H W Sbjct: 875 CRR-CWASTTSPPACLRRRRVVSSPIWLVGHTTVVGRLHLHRPAVSSAADWCFRLHGW 931 Score = 31.2 bits (69), Expect = 0.86 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Frame = +3 Query: 432 GGCRRACWSPTRSPAACGPARLAPSS--W--GENLISRKSSLLTPSVTQIVFW--RIHPW 593 G CW+ T SP AC R SS W G + + L P+V+ W R+H W Sbjct: 516 GWSHHRCWASTTSPPACLRRRRLVSSPIWLVGHTTVVGRLHLHRPAVSSAADWCFRLHGW 575
>AK101690:Os03g0225700 | Length = 704 Score = 33.1 bits (74), Expect = 0.23 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = -3 Query: 202 CCVSSWPSVLLLD*SPAQPLATRLQITR---IGWEAEARTAVPTDVGHSPLGSSIHPP 38 CC+ +L+ + P LA LQ R + W R AV T + L S +HPP Sbjct: 401 CCIEHGQQILVYEFMPNGTLAQHLQRERGPAVPWTVRLRIAVETAKAIAYLHSEVHPP 458
>AK063542:Os06g0710800 | Length = 160 Score = 31.6 bits (70), Expect = 0.66 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = +1 Query: 475 RHAGRRDWPLRRGVKISFPGNHP 543 RHAGRR P RRGV+ PG P Sbjct: 47 RHAGRRAAPQRRGVRAPHPGARP 69
>AK111295:Os11g0671100 | Length = 97 Score = 30.0 bits (66), Expect = 1.9 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +3 Query: 381 RGGYRRTWWIWCGHCSPGGCR---RACWSPTRSPAACGPARLAPSS 509 RG R +WW CSPGG R R C P SPA+ G + S+ Sbjct: 17 RGWRRGSWW---RGCSPGGTRSSTRCC--PAASPASSGSSASTASA 57
>Os04g0388600:Os04g0388600 | Length = 148 Score = 29.6 bits (65), Expect = 2.5 Identities = 17/44 (38%), Positives = 17/44 (38%) Frame = +3 Query: 384 GGYRRTWWIWCGHCSPGGCRRACWSPTRSPAACGPARLAPSSWG 515 GG R WW WC CWSP PAA A S G Sbjct: 48 GGGRPPWWWWCWWWW-WWLLPWCWSPPAPPAAAAAAEEEDQSVG 90
>AK120070:Os02g0150700 | Length = 580 Score = 29.6 bits (65), Expect = 2.5 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 Query: 613 QYNAMCIHGWIRQKTIC 563 QY+ CIH W+RQK C Sbjct: 551 QYHVCCIHQWLRQKNWC 567
>AK066069:Os06g0695600 | Length = 579 Score = 29.6 bits (65), Expect = 2.5 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -3 Query: 613 QYNAMCIHGWIRQKTIC 563 QY+ CIH W+RQK C Sbjct: 546 QYHVSCIHEWLRQKNWC 562
>AK073733:Os01g0938600 | Length = 513 Score = 28.9 bits (63), Expect = 4.3 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 360 GRKG*PCRGGYRRTWWIWCGHCSPGGCRR 446 GR G RGG R W WC C GG R Sbjct: 29 GRGGGGGRGGSGRLGWWWCCCCGVGGVVR 57
>AK073705:Os06g0138200 | Length = 616 Score = 28.9 bits (63), Expect = 4.3 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 160 SPAQPLATRLQITRIGWEAEARTAVPTDVGHSPLGSSIHPPSV 32 SP+ P QI GWE++ TA P + P G PP + Sbjct: 68 SPSSPPPRIDQIEPSGWESDPATAHPQHLPFEPSGWDSDPPQL 110
>AK058914:Os06g0138200 | Length = 240 Score = 28.9 bits (63), Expect = 4.3 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 160 SPAQPLATRLQITRIGWEAEARTAVPTDVGHSPLGSSIHPPSV 32 SP+ P QI GWE++ TA P + P G PP + Sbjct: 68 SPSSPPPRIDQIEPSGWESDPATAHPQHLPFEPSGWDSDPPQL 110
>AK110366: | Length = 425 Score = 28.5 bits (62), Expect = 5.6 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 7/85 (8%) Frame = +3 Query: 60 NGECPTSVGTAVRASASQPILVICSRVARGCAGD*SRSKTEGQEDTQQTSW-LALFKRRS 236 NG+ PT+ TA+ A P + + SRV + +S +E + W A F+ RS Sbjct: 78 NGDSPTAAATAMNPPAGLPAVRLSSRVRVEAELEHMKSVSEHFAFPRLLGWEFADFEGRS 137 Query: 237 ------EVAPGHRHQGAG*VFVELP 293 E G H+ G V+LP Sbjct: 138 YALLFMECCSGDLHKAIGRRAVQLP 162
>AK065766:Os05g0564300 | Length = 500 Score = 28.5 bits (62), Expect = 5.6 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -3 Query: 613 QYNAMCIHGWIRQKTIC 563 +Y+AMCI GW+ K +C Sbjct: 469 KYHAMCIKGWLMVKNLC 485
>AK109511:Os04g0129300 | Length = 675 Score = 28.5 bits (62), Expect = 5.6 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = -1 Query: 744 FTLLYRTEELWKERKNKTSSRISVTSINGQAIQLNNNV 631 FTL Y +EE W R N+++ + + NGQ+I+ ++ + Sbjct: 173 FTLDYHSEERWSRRSNQST---AFRTSNGQSIEHHSEI 207
>AK101247:Os09g0441900 | Length = 444 Score = 24.3 bits (51), Expect(2) = 7.0 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = +3 Query: 414 CGHCSPGGCRRACWSPTRSPAACGPA 491 CG CS C+ C S + + +C P+ Sbjct: 294 CGSCSCAQCKPDCGSCSTNCCSCKPS 319 Score = 22.3 bits (46), Expect(2) = 7.0 Identities = 8/19 (42%), Positives = 10/19 (52%) Frame = +2 Query: 239 GCSGSSPPRCRVGICGIAS 295 GC+G P C CG+ S Sbjct: 270 GCNGCGCPSCGCNGCGLPS 288
>AK120499:Os09g0265800 | Length = 240 Score = 28.1 bits (61), Expect = 7.3 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +3 Query: 423 CSPGGCRRACWSPTRSPAACGPARLAPSS 509 C+ G R CW+ T SP AC R SS Sbjct: 73 CTAGLLSRRCWASTTSPPACLRRRQLVSS 101
>AK119834:Os08g0561800 | Length = 184 Score = 28.1 bits (61), Expect = 7.3 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 7/55 (12%) Frame = +3 Query: 375 PCRGGYRRTWWIWCGHCSPGGCRRACWSPTRSPAACG-------PARLAPSSWGE 518 P GG + W W SP G R W AA G AR P S GE Sbjct: 9 PAAGGGHGSSWRWAEEASPAGQRE--WRTGEGAAAVGRDGGGGSAARSTPGSGGE 61
>AK103582:Os04g0464200 | Length = 505 Score = 28.1 bits (61), Expect = 7.3 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +1 Query: 184 AKKTHNKLPGWLCSRGARRLLRVIATKVQGRYLW-NCQPPSFATATAAEEGKERLGRGAE 360 A TH L G + S R R I+ +Q +W NC P F A G +R G G E Sbjct: 416 ANDTHYGLAGAVISNDLERCER-ISKAIQSGIVWINCSQPCFVQAPWG--GNKRSGFGRE 472 Query: 361 EGK 369 G+ Sbjct: 473 LGQ 475
>AK110018: | Length = 880 Score = 27.7 bits (60), Expect = 9.5 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 5/39 (12%) Frame = +2 Query: 524 HFQEIIPSDSFRH--ADSF---LANPSMDTHCIVLYRVP 625 H Q I +D+F+H A SF + +PS TH +YRVP Sbjct: 57 HQQGFIAADAFQHSVARSFSPAVQDPSTSTHDGAVYRVP 95
>AK107851:Os10g0551700 | Length = 162 Score = 27.7 bits (60), Expect = 9.5 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +3 Query: 417 GHCSPGGCRRACWSPTRSPA 476 G C+ G CR C PT +PA Sbjct: 37 GRCNGGACRSRCAKPTPAPA 56
>AK105001:Os09g0542100 | Length = 490 Score = 27.7 bits (60), Expect = 9.5 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = +3 Query: 402 WWIWCGHCSPGGCRRA 449 WW WCG CS GC A Sbjct: 19 WWWWCGGCS--GCAAA 32 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,299,237 Number of extensions: 615851 Number of successful extensions: 2143 Number of sequences better than 10.0: 22 Number of HSP's gapped: 2140 Number of HSP's successfully gapped: 24 Length of query: 266 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 167 Effective length of database: 11,435,796 Effective search space: 1909777932 Effective search space used: 1909777932 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
