ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf97a07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 594 atacacattgcattgtactgtacagagtccctaaatct 631 |||||||||||||| |||||||||||| || ||||||| Sbjct: 6267309 atacacattgcattatactgtacagagcccataaatct 6267272 Score = 44.1 bits (22), Expect = 0.76 Identities = 52/62 (83%) Strand = Plus / Minus Query: 423 tgctcgccgggtgggtgtcggcgtgcctgctggtcgccaacgagatcgcccgcggcatgc 482 |||||||||| ||||| || |||||||| || ||||| ||||| ||||||||||||| Sbjct: 6268438 tgctcgccggctgggtttcaacgtgcctggtgatcgccggtgagatagcccgcggcatgc 6268379 Query: 483 gg 484 || Sbjct: 6268378 gg 6268377
>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1116_C08 Length = 102317 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 594 atacacattgcattgtactgtacagagtccctaaatct 631 |||||||||||||| |||||||||||| || ||||||| Sbjct: 17869 atacacattgcattatactgtacagagcccataaatct 17832 Score = 44.1 bits (22), Expect = 0.76 Identities = 52/62 (83%) Strand = Plus / Minus Query: 423 tgctcgccgggtgggtgtcggcgtgcctgctggtcgccaacgagatcgcccgcggcatgc 482 |||||||||| ||||| || |||||||| || ||||| ||||| ||||||||||||| Sbjct: 18998 tgctcgccggctgggtttcaacgtgcctggtgatcgccggtgagatagcccgcggcatgc 18939 Query: 483 gg 484 || Sbjct: 18938 gg 18937
>dbj|AK070126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047L06, full insert sequence Length = 791 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 594 atacacattgcattgtactgtacagagtccctaaatct 631 |||||||||||||| |||||||||||| || ||||||| Sbjct: 532 atacacattgcattatactgtacagagcccataaatct 569 Score = 44.1 bits (22), Expect = 0.76 Identities = 52/62 (83%) Strand = Plus / Plus Query: 423 tgctcgccgggtgggtgtcggcgtgcctgctggtcgccaacgagatcgcccgcggcatgc 482 |||||||||| ||||| || |||||||| || ||||| ||||| ||||||||||||| Sbjct: 372 tgctcgccggctgggtttcaacgtgcctggtgatcgccggtgagatagcccgcggcatgc 431 Query: 483 gg 484 || Sbjct: 432 gg 433
>gb|AC124103.5| Mus musculus chromosome 15, clone RP24-271M13, complete sequence Length = 177753 Score = 46.1 bits (23), Expect = 0.19 Identities = 26/27 (96%) Strand = Plus / Plus Query: 746 attttattttccttttacattatagtt 772 |||| |||||||||||||||||||||| Sbjct: 111819 atttaattttccttttacattatagtt 111845
>gb|AC146586.2| Medicago truncatula clone mth2-71m12, complete sequence Length = 109629 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 688 tgatgttttgttcttcctttctt 710 ||||||||||||||||||||||| Sbjct: 82599 tgatgttttgttcttcctttctt 82621
>emb|AL645530.11| Mouse DNA sequence from clone RP23-92N10 on chromosome 11, complete sequence Length = 91481 Score = 46.1 bits (23), Expect = 0.19 Identities = 26/27 (96%) Strand = Plus / Minus Query: 723 ctgttctgtatagtaatgtaaatattt 749 |||||||| |||||||||||||||||| Sbjct: 5581 ctgttctgaatagtaatgtaaatattt 5555
>gb|AC134912.5| Mus musculus BAC clone RP23-162E15 from chromosome 14, complete sequence Length = 204954 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 741 taaatattttattttcctttta 762 |||||||||||||||||||||| Sbjct: 172368 taaatattttattttcctttta 172389
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 731 tatagtaatgtaaatattttat 752 |||||||||||||||||||||| Sbjct: 2214919 tatagtaatgtaaatattttat 2214940
>gb|AC008146.10| Trypanosoma brucei chromosome 6 clone RPCI93-30P15, complete sequence Length = 127405 Score = 44.1 bits (22), Expect = 0.76 Identities = 28/30 (93%) Strand = Plus / Minus Query: 682 tctagatgatgttttgttcttcctttcttt 711 |||| ||||||||||||||||| ||||||| Sbjct: 90153 tctatatgatgttttgttcttcgtttcttt 90124
>gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complete sequence Length = 161579 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 731 tatagtaatgtaaatattttat 752 |||||||||||||||||||||| Sbjct: 16408 tatagtaatgtaaatattttat 16429
>gb|BT011461.1| Drosophila melanogaster RE27685 full insert cDNA Length = 3759 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 731 tatagtaatgtaaatattttat 752 |||||||||||||||||||||| Sbjct: 3708 tatagtaatgtaaatattttat 3687
>gb|BT011351.1| Drosophila melanogaster RE74788 full insert cDNA Length = 3639 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 731 tatagtaatgtaaatattttat 752 |||||||||||||||||||||| Sbjct: 3582 tatagtaatgtaaatattttat 3561
>ref|NM_169141.1| Drosophila melanogaster CG1021-RA, transcript variant A (CG1021), mRNA Length = 3443 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 731 tatagtaatgtaaatattttat 752 |||||||||||||||||||||| Sbjct: 3405 tatagtaatgtaaatattttat 3384
>ref|NM_141397.2| Drosophila melanogaster CG1021-RB, transcript variant B (CG1021), mRNA Length = 3079 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 731 tatagtaatgtaaatattttat 752 |||||||||||||||||||||| Sbjct: 3041 tatagtaatgtaaatattttat 3020
>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence Length = 117113 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 691 tgttttgttcttcctttctttc 712 |||||||||||||||||||||| Sbjct: 117002 tgttttgttcttcctttctttc 116981
>gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complete sequence Length = 151902 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 736 taatgtaaatattttattttcc 757 |||||||||||||||||||||| Sbjct: 126062 taatgtaaatattttattttcc 126041
>gb|AC016445.4| Drosophila melanogaster, chromosome 3R, region 83D-83F, BAC clone BACR19H03, complete sequence Length = 157141 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 731 tatagtaatgtaaatattttat 752 |||||||||||||||||||||| Sbjct: 1098 tatagtaatgtaaatattttat 1077
>gb|AY052028.1| Drosophila melanogaster LD47668 full length cDNA Length = 1836 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 731 tatagtaatgtaaatattttat 752 |||||||||||||||||||||| Sbjct: 1783 tatagtaatgtaaatattttat 1762
>emb|AL669822.10| Mouse DNA sequence from clone RP23-47J12 on chromosome 11 Contains the 5' end of the Cobl gene for cordon-bleu and a CpG island, complete sequence Length = 137869 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 cagttgttgcctctccatcaag 30 |||||||||||||||||||||| Sbjct: 33221 cagttgttgcctctccatcaag 33200
>gb|AC097476.2| Homo sapiens BAC clone RP11-109N11 from 4, complete sequence Length = 159852 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 701 ttcctttctttccacaattctt 722 |||||||||||||||||||||| Sbjct: 155843 ttcctttctttccacaattctt 155822
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.76 Identities = 25/26 (96%) Strand = Plus / Minus Query: 453 tggtcgccaacgagatcgcccgcggc 478 |||||||||||||||||||| ||||| Sbjct: 5950158 tggtcgccaacgagatcgccagcggc 5950133
>gb|AC172744.2| Medicago truncatula chromosome 2 BAC clone mth2-33p17, complete sequence Length = 116124 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 731 tatagtaatgtaaatattttat 752 |||||||||||||||||||||| Sbjct: 26137 tatagtaatgtaaatattttat 26158
>emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2-139g23, COMPLETE SEQUENCE Length = 133229 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 691 tgttttgttcttcctttctttc 712 |||||||||||||||||||||| Sbjct: 12133 tgttttgttcttcctttctttc 12112
>gb|AC163609.4| Mus musculus chromosome 1, clone RP24-128P11, complete sequence Length = 164997 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 691 tgttttgttcttcctttctttc 712 |||||||||||||||||||||| Sbjct: 53790 tgttttgttcttcctttctttc 53769
>emb|AL928560.6| Mouse DNA sequence from clone RP23-353N23 on chromosome 2, complete sequence Length = 209502 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 gttgttgcctctccatcaagaa 32 |||||||||||||||||||||| Sbjct: 121964 gttgttgcctctccatcaagaa 121985
>gb|EF093509.1| Bos taurus BTA22 scaffold190836_5512 genomic sequence contig containing highly polymorphic single nucleotide sites Length = 11293 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 528 tccaggaaatcatcccttctgactc 552 ||||||||||||||||||| ||||| Sbjct: 106 tccaggaaatcatcccttcagactc 130
>gb|AC183802.2| Pan troglodytes BAC clone CH251-182H23 from chromosome 18, complete sequence Length = 147855 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 69140 tttccttgtaaattatagttctttaaaga 69112
>gb|AC184174.2| Pan troglodytes BAC clone CH251-55I20 from chromosome 18, complete sequence Length = 162907 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 143277 tttccttgtaaattatagttctttaaaga 143305
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 gtaatgtaaatattttatttt 755 ||||||||||||||||||||| Sbjct: 16487422 gtaatgtaaatattttatttt 16487442
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 cgtgcctgctggtcgccaacg 464 ||||||||||||||||||||| Sbjct: 5399213 cgtgcctgctggtcgccaacg 5399193
>gb|AC186398.3| Pan troglodytes BAC clone CH251-25J18 from chromosome 21, complete sequence Length = 225519 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 135065 tttccttgtaaattatagttctttaaaga 135037
>gb|AC182587.5| Pan troglodytes BAC clone CH251-207G3 from chromosome 18, complete sequence Length = 195115 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 49252 tttccttgtaaattatagttctttaaaga 49224
>gb|AC111134.10| Mus musculus chromosome 3, clone RP23-349J3, complete sequence Length = 223171 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 732 atagtaatgtaaatattttat 752 ||||||||||||||||||||| Sbjct: 41778 atagtaatgtaaatattttat 41758
>gb|AC027184.15| Mus musculus chromosome 14, clone RP23-138C14, complete sequence Length = 196806 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 723 ctgttctgtatagtaatgtaaatat 747 |||||||| |||||||||||||||| Sbjct: 143527 ctgttctgaatagtaatgtaaatat 143551
>ref|XM_588383.2| PREDICTED: Bos taurus similar to Leucine-rich repeats neuronal protein 1 precursor (NLRR-1) (LOC539619), mRNA Length = 3396 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 528 tccaggaaatcatcccttctgactc 552 ||||||||||||||||||| ||||| Sbjct: 100 tccaggaaatcatcccttcagactc 124
>gb|AC102271.6| Mus musculus chromosome 7, clone RP24-281C4, complete sequence Length = 184607 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 747 ttttattttccttttacatta 767 ||||||||||||||||||||| Sbjct: 17552 ttttattttccttttacatta 17572
>gb|AC102052.7| Mus musculus chromosome 3, clone RP23-460F15, complete sequence Length = 175306 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 693 ttttgttcttcctttctttcc 713 ||||||||||||||||||||| Sbjct: 7874 ttttgttcttcctttctttcc 7854
>gb|AC123253.4| Rattus norvegicus 12 BAC CH230-230N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231202 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 723 ctgttctgtatagtaatgtaaatat 747 |||||||| |||||||||||||||| Sbjct: 159945 ctgttctgaatagtaatgtaaatat 159969
>gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence Length = 191684 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 744 atattttattttccttttacattat 768 ||||||||||||||||| ||||||| Sbjct: 34125 atattttattttcctttgacattat 34101
>gb|AY663107.1| Apis florea major royal jelly protein 3 (mrjp3) gene, partial cds Length = 3477 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 742 aaatattttattttccttttacatt 766 |||||||||||||| |||||||||| Sbjct: 853 aaatattttattttacttttacatt 877
>gb|AC123068.4| Mus musculus BAC clone RP23-21P10 from 1, complete sequence Length = 221464 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 720 cttctgttctgtatagtaatgtaaatatt 748 ||||||||||| || |||||||||||||| Sbjct: 190499 cttctgttctgaattgtaatgtaaatatt 190527
>gb|AC093856.3| Homo sapiens BAC clone RP11-518I12 from 7, complete sequence Length = 205317 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 732 atagtaatgtaaatattttattttccttt 760 ||||| |||||||||||||| |||||||| Sbjct: 54941 atagtgatgtaaatattttactttccttt 54913
>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete sequence Length = 253924 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 738 atgtaaatattttattttcctttta 762 ||||||||||||||||||| ||||| Sbjct: 214692 atgtaaatattttattttcgtttta 214716
>gb|AC092053.3| Homo sapiens chromosome 3 clone RP11-331G2, complete sequence Length = 176593 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 746 attttattttccttttacatt 766 ||||||||||||||||||||| Sbjct: 4638 attttattttccttttacatt 4658
>gb|AC102128.18| Mus musculus chromosome 3, clone RP23-205G9, complete sequence Length = 192509 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 693 ttttgttcttcctttctttcc 713 ||||||||||||||||||||| Sbjct: 180731 ttttgttcttcctttctttcc 180711
>gb|AC104850.2| Homo sapiens chromosome 3 clone RP11-241K18, complete sequence Length = 173580 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 746 attttattttccttttacatt 766 ||||||||||||||||||||| Sbjct: 75722 attttattttccttttacatt 75702
>gb|AC104021.5| Homo sapiens chromosome 8, clone RP11-378A12, complete sequence Length = 135998 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 746 attttattttccttttacatt 766 ||||||||||||||||||||| Sbjct: 10511 attttattttccttttacatt 10531
>gb|AC104419.3| Homo sapiens chromosome 8, clone RP11-134O21, complete sequence Length = 164781 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 746 attttattttccttttacatt 766 ||||||||||||||||||||| Sbjct: 104095 attttattttccttttacatt 104115
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 aattgccagcctccttccttt 306 ||||||||||||||||||||| Sbjct: 5076060 aattgccagcctccttccttt 5076040
>gb|AC091097.8| Homo sapiens chromosome 11, clone RP11-65C9, complete sequence Length = 162515 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 515 tgaaaatctcatttccaggaaatca 539 |||| |||||||||||||||||||| Sbjct: 69921 tgaatatctcatttccaggaaatca 69897
>emb|Z95114.19|HS212A2 Human DNA sequence from clone CTA-212A2 on chromosome 22q12, complete sequence Length = 212753 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 744 atattttattttccttttacattat 768 ||||||||||||||||| ||||||| Sbjct: 152478 atattttattttcctttgacattat 152502
>emb|AL590663.13| Human DNA sequence from clone RP11-11M11 on chromosome 6, complete sequence Length = 56954 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 748 tttattttccttttacattat 768 ||||||||||||||||||||| Sbjct: 11227 tttattttccttttacattat 11247
>gb|AC093177.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone BACR33A07, complete sequence Length = 174726 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 735 gtaatgtaaatattttatttt 755 ||||||||||||||||||||| Sbjct: 33260 gtaatgtaaatattttatttt 33240
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 455 gtcgccaacgagatcgcccgcggca 479 |||||| |||||||||||||||||| Sbjct: 158967 gtcgccgacgagatcgcccgcggca 158943
>emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 54 Length = 198715 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 691 tgttttgttcttcctttcttt 711 ||||||||||||||||||||| Sbjct: 167539 tgttttgttcttcctttcttt 167559
>emb|AL034556.4|PFMAL3P5 Plasmodium falciparum MAL3P5, complete sequence Length = 86826 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 738 atgtaaatattttattttcctttta 762 ||||||||||||||||| ||||||| Sbjct: 8535 atgtaaatattttatttccctttta 8559
>emb|AL031187.1|ATT6K22 Arabidopsis thaliana DNA chromosome 4, BAC clone T6K22 (ESSAII project) Length = 89219 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 691 tgttttgttcttcctttcttt 711 ||||||||||||||||||||| Sbjct: 24262 tgttttgttcttcctttcttt 24282
>gb|AY016370.1| Homo sapiens hnRNPA1 pseudogene, complete sequence; and CC chemokine receptor 8 (CCR8) and CX3C chemokine receptor 1 (CX3CR1) genes, complete cds Length = 86172 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 746 attttattttccttttacatt 766 ||||||||||||||||||||| Sbjct: 59838 attttattttccttttacatt 59858
>gb|AC007185.12|AC007185 Drosophila melanogaster, chromosome 2L, region 36A-, BAC clone BACR44N04, complete sequence Length = 190651 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 735 gtaatgtaaatattttatttt 755 ||||||||||||||||||||| Sbjct: 29755 gtaatgtaaatattttatttt 29775
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 aattgccagcctccttccttt 306 ||||||||||||||||||||| Sbjct: 35098 aattgccagcctccttccttt 35078
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 472 ccgcggcatgcgggccggcgagattggcc 500 |||| ||||||| |||||||||||||||| Sbjct: 8631171 ccgccgcatgcgcgccggcgagattggcc 8631199
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 aattgccagcctccttccttt 306 ||||||||||||||||||||| Sbjct: 118174 aattgccagcctccttccttt 118154
>dbj|BS000001.1| Pan troglodytes chromosome 22 clone:PTB-520F08, map 22, complete sequences Length = 99407 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 54537 tttccttgtaaattatagttctttaaaga 54565
>gb|AC102178.21| Mus musculus chromosome 7, clone RP24-70C24, complete sequence Length = 190370 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 747 ttttattttccttttacatta 767 ||||||||||||||||||||| Sbjct: 173450 ttttattttccttttacatta 173470
>gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, complete sequence Length = 182530 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 720 cttctgttctgtatagtaatgtaaatatt 748 ||||||||||| || |||||||||||||| Sbjct: 159061 cttctgttctgaattgtaatgtaaatatt 159033
>emb|BX072566.10| Human DNA sequence from clone RP11-25L22 on chromosome 22, complete sequence Length = 164239 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 154133 tttccttgtaaattatagttctttaaaga 154105
>dbj|AP006261.1| Homo sapiens genomic DNA, chromosome 18, clone:CTD-2594A10, complete sequence Length = 189276 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 168578 tttccttgtaaattatagttctttaaaga 168550
>dbj|AP005670.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-72P4, complete sequence Length = 184770 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 152955 tttccttgtaaattatagttctttaaaga 152927
>dbj|AP005058.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-19M12, complete sequence Length = 179546 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 8017 tttccttgtaaattatagttctttaaaga 7989
>gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete sequence Length = 198005 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 734 agtaatgtaaatattttattt 754 ||||||||||||||||||||| Sbjct: 47918 agtaatgtaaatattttattt 47898
>emb|AL163203.2|HS21C003 Homo sapiens chromosome 21 segment HS21C003 Length = 340000 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 290579 tttccttgtaaattatagttctttaaaga 290607
>dbj|AP001465.1| Homo sapiens genomic DNA, chromosome 21q11.1, clone:B663H15, centromere region, complete sequence Length = 104785 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 753 tttccttttacattatagttctttaaaga 781 ||||||| || |||||||||||||||||| Sbjct: 53064 tttccttgtaaattatagttctttaaaga 53092 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 144,758,154 Number of extensions: 8889857 Number of successful extensions: 230127 Number of sequences better than 10.0: 72 Number of HSP's gapped: 230127 Number of HSP's successfully gapped: 75 Length of query: 798 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 776 Effective length of database: 18,508,616,841 Effective search space: 14362686668616 Effective search space used: 14362686668616 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
