ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf99f20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001069107.1| Oryza sativa (japonica cultivar-group) Os09g0110400 (Os09g0110400) mRNA, complete cds Length = 1665 Score = 583 bits (294), Expect = e-163 Identities = 398/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 121 tcgtaccagcggttcccgcgggtgcggatccgcgagctgaaggacgactacgccaagttc 180 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 181 gagctccgcgacaccgacgccagcatggccaacgccctccgccgcgtcatgatcgccgag 240 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 241 gtccccaccgtcgccatcgacctcgtcgagatcgaggtcaactcctccgtcctcaacgac 300 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| |||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 301 gagttcatcgcccaccgcctcggcctcatccccctcacctccgccgccgccatggccatg 360 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 361 cgcttctcccgcgactgcgacgcctgcgacggcgacggctcctgcgagtactgctccgtc 420 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || Sbjct: 421 gagttccacctcgccgcccgcgccaccgactccgaccagaccctcgaggtcacct---cc 477 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgaccagcaaagggaataccag 532 || |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 478 aacgacctccgctccaccgaccccaaggtctgccccgtcgaccaggctagggcctaccag 537 Query: 533 caggccctcggc 544 || ||||||||| Sbjct: 538 cacgccctcggc 549 Score = 385 bits (194), Expect = e-103 Identities = 395/462 (85%) Strand = Plus / Plus Query: 577 tgaccacagaggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagc 636 |||||| || |||||| |||||||||||||||| || || |||||||| | || ||||| Sbjct: 582 tgaccagaggggcatactaattgtaaagctgcgtcggggccaagagctcaggctccgagc 641 Query: 637 aattgccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgac 696 |||||| |||||||||||||| |||||||||||||| ||||| || || ||||||||||| Sbjct: 642 aattgctaggaagggaattggcaaggaccatgccaagtggtcccccgccgctactgtgac 701 Query: 697 cttcatgtatgagcctgatatacgtattaatcaagaactcatggagacactcacacttga 756 ||||||||||||||||| |||||||| ||| ||||||||||||| ||| | ||||| || Sbjct: 702 tttcatgtatgagcctgaaatacgtatcaatgaagaactcatggaaacattgacactcga 761 Query: 757 ggaaaaacaaagctgggtggagagcagccctacaaaagtatttgacattgatcctgtcac 816 |||||||| || | ||||||||| |||||||||||||| || |||||||||| ||| Sbjct: 762 ggaaaaacgaaatttggtggagagtagccctacaaaagtgttcaacattgatcccaacac 821 Query: 817 ccaacaggtgacgattgtggacgcagaggcatacacatatgacgatgaggtgatcaagaa 876 ||||||||| ||| ||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 822 tcaacaggtggtagttgaggatgcagaggcatatacatatgatgatgaggtcatcaagaa 881 Query: 877 agcagaggccatggggaagccaggattggtagagatcaacgccaaggaggacagctttgt 936 |||||| |||||||| ||||| |||||| |||||||||| |||||||||||||||||| | Sbjct: 882 agcagatgccatgggaaagcccggattgatagagatcaatgccaaggaggacagctttat 941 Query: 937 gttcactgtggaaacaacaggcgccatcacagcctacgagctgattatgaatgctatcac 996 |||||||| |||||||| ||||| |||||||| || |||||||| ||||| |||||||| Sbjct: 942 cttcactgttgaaacaactggcgctatcacagcttatgagctgatcatgaacgctatcac 1001 Query: 997 ggtcctgaggcagaagctggacgccgttcgcctgcaagatga 1038 |||| ||||||| ||| | || || ||||| || |||||||| Sbjct: 1002 ggtcttgaggcaaaagttagatgctgttcgtctacaagatga 1043
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 583 bits (294), Expect = e-163 Identities = 398/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 873942 tcgtaccagcggttcccgcgggtgcggatccgcgagctgaaggacgactacgccaagttc 874001 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 874002 gagctccgcgacaccgacgccagcatggccaacgccctccgccgcgtcatgatcgccgag 874061 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 874062 gtccccaccgtcgccatcgacctcgtcgagatcgaggtcaactcctccgtcctcaacgac 874121 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| |||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 874122 gagttcatcgcccaccgcctcggcctcatccccctcacctccgccgccgccatggccatg 874181 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 874182 cgcttctcccgcgactgcgacgcctgcgacggcgacggctcctgcgagtactgctccgtc 874241 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || Sbjct: 874242 gagttccacctcgccgcccgcgccaccgactccgaccagaccctcgaggtcacct---cc 874298 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgaccagcaaagggaataccag 532 || |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 874299 aacgacctccgctccaccgaccccaaggtctgccccgtcgaccaggctagggcctaccag 874358 Query: 533 caggccctcggc 544 || ||||||||| Sbjct: 874359 cacgccctcggc 874370 Score = 206 bits (104), Expect = 1e-49 Identities = 194/224 (86%) Strand = Plus / Plus Query: 587 ggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagcaattgccagg 646 |||||| |||||||||||||||| || || |||||||| | || ||||||||||| ||| Sbjct: 875256 ggcatactaattgtaaagctgcgtcggggccaagagctcaggctccgagcaattgctagg 875315 Query: 647 aagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatgtat 706 ||||||||||| |||||||||||||| ||||| || || ||||||||||| ||||||||| Sbjct: 875316 aagggaattggcaaggaccatgccaagtggtcccccgccgctactgtgactttcatgtat 875375 Query: 707 gagcctgatatacgtattaatcaagaactcatggagacactcacacttgaggaaaaacaa 766 |||||||| |||||||| ||| ||||||||||||| ||| | ||||| |||||||||| | Sbjct: 875376 gagcctgaaatacgtatcaatgaagaactcatggaaacattgacactcgaggaaaaacga 875435 Query: 767 agctgggtggagagcagccctacaaaagtatttgacattgatcc 810 | | ||||||||| |||||||||||||| || |||||||||| Sbjct: 875436 aatttggtggagagtagccctacaaaagtgttcaacattgatcc 875479 Score = 198 bits (100), Expect = 4e-47 Identities = 175/200 (87%) Strand = Plus / Plus Query: 839 gcagaggcatacacatatgacgatgaggtgatcaagaaagcagaggccatggggaagcca 898 ||||||||||| |||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 879940 gcagaggcatatacatatgatgatgaggtcatcaagaaagcagatgccatgggaaagccc 879999 Query: 899 ggattggtagagatcaacgccaaggaggacagctttgtgttcactgtggaaacaacaggc 958 |||||| |||||||||| |||||||||||||||||| | |||||||| |||||||| ||| Sbjct: 880000 ggattgatagagatcaatgccaaggaggacagctttatcttcactgttgaaacaactggc 880059 Query: 959 gccatcacagcctacgagctgattatgaatgctatcacggtcctgaggcagaagctggac 1018 || |||||||| || |||||||| ||||| |||||||||||| ||||||| ||| | || Sbjct: 880060 gctatcacagcttatgagctgatcatgaacgctatcacggtcttgaggcaaaagttagat 880119 Query: 1019 gccgttcgcctgcaagatga 1038 || ||||| || |||||||| Sbjct: 880120 gctgttcgtctacaagatga 880139
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 583 bits (294), Expect = e-163 Identities = 398/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 38069 tcgtaccagcggttcccgcgggtgcggatccgcgagctgaaggacgactacgccaagttc 38128 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 38129 gagctccgcgacaccgacgccagcatggccaacgccctccgccgcgtcatgatcgccgag 38188 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 38189 gtccccaccgtcgccatcgacctcgtcgagatcgaggtcaactcctccgtcctcaacgac 38248 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| |||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 38249 gagttcatcgcccaccgcctcggcctcatccccctcacctccgccgccgccatggccatg 38308 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 38309 cgcttctcccgcgactgcgacgcctgcgacggcgacggctcctgcgagtactgctccgtc 38368 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || Sbjct: 38369 gagttccacctcgccgcccgcgccaccgactccgaccagaccctcgaggtcacct---cc 38425 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgaccagcaaagggaataccag 532 || |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 38426 aacgacctccgctccaccgaccccaaggtctgccccgtcgaccaggctagggcctaccag 38485 Query: 533 caggccctcggc 544 || ||||||||| Sbjct: 38486 cacgccctcggc 38497 Score = 206 bits (104), Expect = 1e-49 Identities = 194/224 (86%) Strand = Plus / Plus Query: 587 ggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagcaattgccagg 646 |||||| |||||||||||||||| || || |||||||| | || ||||||||||| ||| Sbjct: 39383 ggcatactaattgtaaagctgcgtcggggccaagagctcaggctccgagcaattgctagg 39442 Query: 647 aagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatgtat 706 ||||||||||| |||||||||||||| ||||| || || ||||||||||| ||||||||| Sbjct: 39443 aagggaattggcaaggaccatgccaagtggtcccccgccgctactgtgactttcatgtat 39502 Query: 707 gagcctgatatacgtattaatcaagaactcatggagacactcacacttgaggaaaaacaa 766 |||||||| |||||||| ||| ||||||||||||| ||| | ||||| |||||||||| | Sbjct: 39503 gagcctgaaatacgtatcaatgaagaactcatggaaacattgacactcgaggaaaaacga 39562 Query: 767 agctgggtggagagcagccctacaaaagtatttgacattgatcc 810 | | ||||||||| |||||||||||||| || |||||||||| Sbjct: 39563 aatttggtggagagtagccctacaaaagtgttcaacattgatcc 39606 Score = 198 bits (100), Expect = 4e-47 Identities = 175/200 (87%) Strand = Plus / Plus Query: 839 gcagaggcatacacatatgacgatgaggtgatcaagaaagcagaggccatggggaagcca 898 ||||||||||| |||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 44067 gcagaggcatatacatatgatgatgaggtcatcaagaaagcagatgccatgggaaagccc 44126 Query: 899 ggattggtagagatcaacgccaaggaggacagctttgtgttcactgtggaaacaacaggc 958 |||||| |||||||||| |||||||||||||||||| | |||||||| |||||||| ||| Sbjct: 44127 ggattgatagagatcaatgccaaggaggacagctttatcttcactgttgaaacaactggc 44186 Query: 959 gccatcacagcctacgagctgattatgaatgctatcacggtcctgaggcagaagctggac 1018 || |||||||| || |||||||| ||||| |||||||||||| ||||||| ||| | || Sbjct: 44187 gctatcacagcttatgagctgatcatgaacgctatcacggtcttgaggcaaaagttagat 44246 Query: 1019 gccgttcgcctgcaagatga 1038 || ||||| || |||||||| Sbjct: 44247 gctgttcgtctacaagatga 44266
>dbj|AK121793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095G14, full insert sequence Length = 1347 Score = 583 bits (294), Expect = e-163 Identities = 398/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 164 tcgtaccagcggttcccgcgggtgcggatccgcgagctgaaggacgactacgccaagttc 223 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 224 gagctccgcgacaccgacgccagcatggccaacgccctccgccgcgtcatgatcgccgag 283 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 284 gtccccaccgtcgccatcgacctcgtcgagatcgaggtcaactcctccgtcctcaacgac 343 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| |||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 344 gagttcatcgcccaccgcctcggcctcatccccctcacctccgccgccgccatggccatg 403 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 404 cgcttctcccgcgactgcgacgcctgcgacggcgacggctcctgcgagtactgctccgtc 463 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || Sbjct: 464 gagttccacctcgccgcccgcgccaccgactccgaccagaccctcgaggtcacct---cc 520 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgaccagcaaagggaataccag 532 || |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 521 aacgacctccgctccaccgaccccaaggtctgccccgtcgaccaggctagggcctaccag 580 Query: 533 caggccctcggc 544 || ||||||||| Sbjct: 581 cacgccctcggc 592 Score = 385 bits (194), Expect = e-103 Identities = 395/462 (85%) Strand = Plus / Plus Query: 577 tgaccacagaggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagc 636 |||||| || |||||| |||||||||||||||| || || |||||||| | || ||||| Sbjct: 625 tgaccagaggggcatactaattgtaaagctgcgtcggggccaagagctcaggctccgagc 684 Query: 637 aattgccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgac 696 |||||| |||||||||||||| |||||||||||||| ||||| || || ||||||||||| Sbjct: 685 aattgctaggaagggaattggcaaggaccatgccaagtggtcccccgccgctactgtgac 744 Query: 697 cttcatgtatgagcctgatatacgtattaatcaagaactcatggagacactcacacttga 756 ||||||||||||||||| |||||||| ||| ||||||||||||| ||| | ||||| || Sbjct: 745 tttcatgtatgagcctgaaatacgtatcaatgaagaactcatggaaacattgacactcga 804 Query: 757 ggaaaaacaaagctgggtggagagcagccctacaaaagtatttgacattgatcctgtcac 816 |||||||| || | ||||||||| |||||||||||||| || |||||||||| ||| Sbjct: 805 ggaaaaacgaaatttggtggagagtagccctacaaaagtgttcaacattgatcccaacac 864 Query: 817 ccaacaggtgacgattgtggacgcagaggcatacacatatgacgatgaggtgatcaagaa 876 ||||||||| ||| ||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 865 tcaacaggtggtagttgaggatgcagaggcatatacatatgatgatgaggtcatcaagaa 924 Query: 877 agcagaggccatggggaagccaggattggtagagatcaacgccaaggaggacagctttgt 936 |||||| |||||||| ||||| |||||| |||||||||| |||||||||||||||||| | Sbjct: 925 agcagatgccatgggaaagcccggattgatagagatcaatgccaaggaggacagctttat 984 Query: 937 gttcactgtggaaacaacaggcgccatcacagcctacgagctgattatgaatgctatcac 996 |||||||| |||||||| ||||| |||||||| || |||||||| ||||| |||||||| Sbjct: 985 cttcactgttgaaacaactggcgctatcacagcttatgagctgatcatgaacgctatcac 1044 Query: 997 ggtcctgaggcagaagctggacgccgttcgcctgcaagatga 1038 |||| ||||||| ||| | || || ||||| || |||||||| Sbjct: 1045 ggtcttgaggcaaaagttagatgctgttcgtctacaagatga 1086
>dbj|AK068844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163O03, full insert sequence Length = 1666 Score = 583 bits (294), Expect = e-163 Identities = 398/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 122 tcgtaccagcggttcccgcgggtgcggatccgcgagctgaaggacgactacgccaagttc 181 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 182 gagctccgcgacaccgacgccagcatggccaacgccctccgccgcgtcatgatcgccgag 241 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 242 gtccccaccgtcgccatcgacctcgtcgagatcgaggtcaactcctccgtcctcaacgac 301 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| |||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 302 gagttcatcgcccaccgcctcggcctcatccccctcacctccgccgccgccatggccatg 361 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 362 cgcttctcccgcgactgcgacgcctgcgacggcgacggctcctgcgagtactgctccgtc 421 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || Sbjct: 422 gagttccacctcgccgcccgcgccaccgactccgaccagaccctcgaggtcacct---cc 478 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgaccagcaaagggaataccag 532 || |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 479 aacgacctccgctccaccgaccccaaggtctgccccgtcgaccaggctagggcctaccag 538 Query: 533 caggccctcggc 544 || ||||||||| Sbjct: 539 cacgccctcggc 550 Score = 385 bits (194), Expect = e-103 Identities = 395/462 (85%) Strand = Plus / Plus Query: 577 tgaccacagaggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagc 636 |||||| || |||||| |||||||||||||||| || || |||||||| | || ||||| Sbjct: 583 tgaccagaggggcatactaattgtaaagctgcgtcggggccaagagctcaggctccgagc 642 Query: 637 aattgccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgac 696 |||||| |||||||||||||| |||||||||||||| ||||| || || ||||||||||| Sbjct: 643 aattgctaggaagggaattggcaaggaccatgccaagtggtcccccgccgctactgtgac 702 Query: 697 cttcatgtatgagcctgatatacgtattaatcaagaactcatggagacactcacacttga 756 ||||||||||||||||| |||||||| ||| ||||||||||||| ||| | ||||| || Sbjct: 703 tttcatgtatgagcctgaaatacgtatcaatgaagaactcatggaaacattgacactcga 762 Query: 757 ggaaaaacaaagctgggtggagagcagccctacaaaagtatttgacattgatcctgtcac 816 |||||||| || | ||||||||| |||||||||||||| || |||||||||| ||| Sbjct: 763 ggaaaaacgaaatttggtggagagtagccctacaaaagtgttcaacattgatcccaacac 822 Query: 817 ccaacaggtgacgattgtggacgcagaggcatacacatatgacgatgaggtgatcaagaa 876 ||||||||| ||| ||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 823 tcaacaggtggtagttgaggatgcagaggcatatacatatgatgatgaggtcatcaagaa 882 Query: 877 agcagaggccatggggaagccaggattggtagagatcaacgccaaggaggacagctttgt 936 |||||| |||||||| ||||| |||||| |||||||||| |||||||||||||||||| | Sbjct: 883 agcagatgccatgggaaagcccggattgatagagatcaatgccaaggaggacagctttat 942 Query: 937 gttcactgtggaaacaacaggcgccatcacagcctacgagctgattatgaatgctatcac 996 |||||||| |||||||| ||||| |||||||| || |||||||| ||||| |||||||| Sbjct: 943 cttcactgttgaaacaactggcgctatcacagcttatgagctgatcatgaacgctatcac 1002 Query: 997 ggtcctgaggcagaagctggacgccgttcgcctgcaagatga 1038 |||| ||||||| ||| | || || ||||| || |||||||| Sbjct: 1003 ggtcttgaggcaaaagttagatgctgttcgtctacaagatga 1044
>dbj|AK061402.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H09, full insert sequence Length = 1346 Score = 583 bits (294), Expect = e-163 Identities = 398/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 121 tcgtaccagcggttcccgcgggtgcggatccgcgagctgaaggacgactacgccaagttc 180 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 181 gagctccgcgacaccgacgccagcatggccaacgccctccgccgcgtcatgatcgccgag 240 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 241 gtccccaccgtcgccatcgacctcgtcgagatcgaggtcaactcctccgtcctcaacgac 300 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| |||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 301 gagttcatcgcccaccgcctcggcctcatccccctcacctccgccgccgccatggccatg 360 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 361 cgcttctcccgcgactgcgacgcctgcgacggcgacggctcctgcgagtactgctccgtc 420 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || Sbjct: 421 gagttccacctcgccgcccgcgccaccgactccgaccagaccctcgaggtcacct---cc 477 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgaccagcaaagggaataccag 532 || |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 478 aacgacctccgctccaccgaccccaaggtctgccccgtcgaccaggctagggcctaccag 537 Query: 533 caggccctcggc 544 || ||||||||| Sbjct: 538 cacgccctcggc 549 Score = 385 bits (194), Expect = e-103 Identities = 395/462 (85%) Strand = Plus / Plus Query: 577 tgaccacagaggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagc 636 |||||| || |||||| |||||||||||||||| || || |||||||| | || ||||| Sbjct: 582 tgaccagaggggcatactaattgtaaagctgcgtcggggccaagagctcaggctccgagc 641 Query: 637 aattgccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgac 696 |||||| |||||||||||||| |||||||||||||| ||||| || || ||||||||||| Sbjct: 642 aattgctaggaagggaattggcaaggaccatgccaagtggtcccccgccgctactgtgac 701 Query: 697 cttcatgtatgagcctgatatacgtattaatcaagaactcatggagacactcacacttga 756 ||||||||||||||||| |||||||| ||| ||||||||||||| ||| | ||||| || Sbjct: 702 tttcatgtatgagcctgaaatacgtatcaatgaagaactcatggaaacattgacactcga 761 Query: 757 ggaaaaacaaagctgggtggagagcagccctacaaaagtatttgacattgatcctgtcac 816 |||||||| || | ||||||||| |||||||||||||| || |||||||||| ||| Sbjct: 762 ggaaaaacgaaatttggtggagagtagccctacaaaagtgttcaacattgatcccaacac 821 Query: 817 ccaacaggtgacgattgtggacgcagaggcatacacatatgacgatgaggtgatcaagaa 876 ||||||||| ||| ||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 822 tcaacaggtggtagttgaggatgcagaggcatatacatatgatgatgaggtcatcaagaa 881 Query: 877 agcagaggccatggggaagccaggattggtagagatcaacgccaaggaggacagctttgt 936 |||||| |||||||| ||||| |||||| |||||||||| |||||||||||||||||| | Sbjct: 882 agcagatgccatgggaaagcccggattgatagagatcaatgccaaggaggacagctttat 941 Query: 937 gttcactgtggaaacaacaggcgccatcacagcctacgagctgattatgaatgctatcac 996 |||||||| |||||||| ||||| |||||||| || |||||||| ||||| |||||||| Sbjct: 942 cttcactgttgaaacaactggcgctatcacagcttatgagctgatcatgaacgctatcac 1001 Query: 997 ggtcctgaggcagaagctggacgccgttcgcctgcaagatga 1038 |||| ||||||| ||| | || || ||||| || |||||||| Sbjct: 1002 ggtcttgaggcaaaagttagatgctgttcgtctacaagatga 1043
>dbj|AK120034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B04, full insert sequence Length = 1342 Score = 575 bits (290), Expect = e-160 Identities = 397/432 (91%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 121 tcgtaccagcggttcccgcgggtgcggatccgcgagctgaaggacgactacgccaagttc 180 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 181 gagctccgcgacaccgacgccagcatggccaacgccctccgccgcgtcatgatcgccgag 240 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 241 gtccccaccgtcgccatcgacttcgtcgagatcgaggtcaactcctccgtcctcaacgac 300 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| |||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 301 gagttcatcgcccaccgcctcggcctcatccccctcacctccgccgccgccatggccatg 360 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 361 cgcttctcccgcgactgcgacgcctgcgacggcgacggctcctgcgagtactgctccgtc 420 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || Sbjct: 421 gagttccacctcgccgcccgcgccaccgactccgaccagaccctcgaggtcacct---cc 477 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgaccagcaaagggaataccag 532 || |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 478 aacgacctccgctccaccgaccccaaggtctgccccgtcgaccaggctagggcctaccag 537 Query: 533 caggccctcggc 544 || ||||||||| Sbjct: 538 cacgccctcggc 549 Score = 385 bits (194), Expect = e-103 Identities = 395/462 (85%) Strand = Plus / Plus Query: 577 tgaccacagaggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagc 636 |||||| || |||||| |||||||||||||||| || || |||||||| | || ||||| Sbjct: 582 tgaccagaggggcatactaattgtaaagctgcgtcggggccaagagctcaggctccgagc 641 Query: 637 aattgccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgac 696 |||||| |||||||||||||| |||||||||||||| ||||| || || ||||||||||| Sbjct: 642 aattgctaggaagggaattggcaaggaccatgccaagtggtcccccgccgctactgtgac 701 Query: 697 cttcatgtatgagcctgatatacgtattaatcaagaactcatggagacactcacacttga 756 ||||||||||||||||| |||||||| ||| ||||||||||||| ||| | ||||| || Sbjct: 702 tttcatgtatgagcctgaaatacgtatcaatgaagaactcatggaaacattgacactcga 761 Query: 757 ggaaaaacaaagctgggtggagagcagccctacaaaagtatttgacattgatcctgtcac 816 |||||||| || | ||||||||| |||||||||||||| || |||||||||| ||| Sbjct: 762 ggaaaaacgaaatttggtggagagtagccctacaaaagtgttcaacattgatcccaacac 821 Query: 817 ccaacaggtgacgattgtggacgcagaggcatacacatatgacgatgaggtgatcaagaa 876 ||||||||| ||| ||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 822 tcaacaggtggtagttgaggatgcagaggcatatacatatgatgatgaggtcatcaagaa 881 Query: 877 agcagaggccatggggaagccaggattggtagagatcaacgccaaggaggacagctttgt 936 |||||| |||||||| ||||| |||||| |||||||||| |||||||||||||||||| | Sbjct: 882 agcagatgccatgggaaagcccggattgatagagatcaatgccaaggaggacagctttat 941 Query: 937 gttcactgtggaaacaacaggcgccatcacagcctacgagctgattatgaatgctatcac 996 |||||||| |||||||| ||||| |||||||| || |||||||| ||||| |||||||| Sbjct: 942 cttcactgttgaaacaactggcgctatcacagcttatgagctgatcatgaacgctatcac 1001 Query: 997 ggtcctgaggcagaagctggacgccgttcgcctgcaagatga 1038 |||| ||||||| ||| | || || ||||| || |||||||| Sbjct: 1002 ggtcttgaggcaaaagttagatgctgttcgtctacaagatga 1043
>dbj|AK103978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-H08, full insert sequence Length = 1306 Score = 575 bits (290), Expect = e-160 Identities = 397/432 (91%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 88 tcgtaccagcggttcccgcgggtgcggatccgcgagctgaaggacgactacgccaagttc 147 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 148 gagctccgcgacaccgacgccagcatggccaacgccctccgccgcgtcatgatcgccgag 207 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 208 gtccccaccgtcgccatcgacctcgtcgagatcgaggtcaactcctccgtcctcaacgac 267 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| ||||||||||||| |||||| ||||||||| ||| ||||||| ||||| Sbjct: 268 gagttcatcgcccaccgcctcggccccatccccctcacctccgccgccgccatggccatg 327 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 328 cgcttctcccgcgactgcgacgcctgcgacggcgacggctcctgcgagtactgctccgtc 387 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| || Sbjct: 388 gagttccacctcgccgcccgcgccaccgactccgaccagaccctcgaggtcacct---cc 444 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgaccagcaaagggaataccag 532 || |||||||||||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct: 445 aacgacctccgctccaccgaccccaaggtctgccccgtcgaccaggctagggcctaccag 504 Query: 533 caggccctcggc 544 || ||||||||| Sbjct: 505 cacgccctcggc 516 Score = 385 bits (194), Expect = e-103 Identities = 395/462 (85%) Strand = Plus / Plus Query: 577 tgaccacagaggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagc 636 |||||| || |||||| |||||||||||||||| || || |||||||| | || ||||| Sbjct: 549 tgaccagaggggcatactaattgtaaagctgcgtcggggccaagagctcaggctccgagc 608 Query: 637 aattgccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgac 696 |||||| |||||||||||||| |||||||||||||| ||||| || || ||||||||||| Sbjct: 609 aattgctaggaagggaattggcaaggaccatgccaagtggtcccccgccgctactgtgac 668 Query: 697 cttcatgtatgagcctgatatacgtattaatcaagaactcatggagacactcacacttga 756 ||||||||||||||||| |||||||| ||| ||||||||||||| ||| | ||||| || Sbjct: 669 tttcatgtatgagcctgaaatacgtatcaatgaagaactcatggaaacattgacactcga 728 Query: 757 ggaaaaacaaagctgggtggagagcagccctacaaaagtatttgacattgatcctgtcac 816 |||||||| || | ||||||||| |||||||||||||| || |||||||||| ||| Sbjct: 729 ggaaaaacgaaatttggtggagagtagccctacaaaagtgttcaacattgatcccaacac 788 Query: 817 ccaacaggtgacgattgtggacgcagaggcatacacatatgacgatgaggtgatcaagaa 876 ||||||||| ||| ||| ||||||||||| |||||||| |||||||| |||||||| Sbjct: 789 tcaacaggtggtagttgaggatgcagaggcatatacatatgatgatgaggtcatcaagaa 848 Query: 877 agcagaggccatggggaagccaggattggtagagatcaacgccaaggaggacagctttgt 936 |||||| |||||||| ||||| |||||| |||||||||| |||||||||||||||||| | Sbjct: 849 agcagatgccatgggaaagcccggattgatagagatcaatgccaaggaggacagctttat 908 Query: 937 gttcactgtggaaacaacaggcgccatcacagcctacgagctgattatgaatgctatcac 996 |||||||| |||||||| ||||| |||||||| || |||||||| ||||| |||||||| Sbjct: 909 cttcactgttgaaacaactggcgctatcacagcttatgagctgatcatgaacgctatcac 968 Query: 997 ggtcctgaggcagaagctggacgccgttcgcctgcaagatga 1038 |||| ||||||| ||| | || || ||||| || |||||||| Sbjct: 969 ggtcttgaggcaaaagttagatgctgttcgtctacaagatga 1010
>gb|AY103726.1| Zea mays PCO100951 mRNA sequence Length = 2440 Score = 392 bits (198), Expect = e-105 Identities = 353/404 (87%), Gaps = 3/404 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 1227 tcgtaccagcgcttcccccgcgttcggatccgcgagctcaaggacgactacgccaagttc 1286 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 || ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 1287 gaactccgcgacaccgacgctagcatggccaacgccctccgccgcgtcatgatcgccgaa 1346 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 ||||| || ||||||||||| ||||| ||||||||| ||||||||||||||||||||| Sbjct: 1347 gtcccaactgtcgccatcgatctcgtagagatcgaggttaactcctccgtcctcaacgac 1406 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| ||||| || || |||||||||||||||||| ||| ||||||| ||| Sbjct: 1407 gagttcatcgcccaccgtctggggctcatcccgctcacctccgccgccgccatgcaaatg 1466 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||| || ||||||||||| || ||||| ||||||||||||||| ||||||||||| Sbjct: 1467 cgcttctctcgggactgcgacgcttgcgacggcgacggctcctgcgagtactgctccgtc 1526 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 ||||| |||||| | | | |||||||||||||| |||||||||||||||||| | || Sbjct: 1527 gagtttcacctctccgtgcacgccaccgactccgaccagacgctcgaggtcacat---cc 1583 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgacca 516 || ||||| | |||| ||||||||||||||||| |||||||| Sbjct: 1584 aacgacctgagatccatggaccccaaggtctgcccagtcgacca 1627 Score = 208 bits (105), Expect = 4e-50 Identities = 171/193 (88%) Strand = Plus / Plus Query: 837 acgcagaggcatacacatatgacgatgaggtgatcaagaaagcagaggccatggggaagc 896 |||| ||||||||||| || ||||| |||||||||||| | || |||||||| ||||||| Sbjct: 1945 acgcggaggcatacacctacgacgacgaggtgatcaagcacgccgaggccatcgggaagc 2004 Query: 897 caggattggtagagatcaacgccaaggaggacagctttgtgttcactgtggaaacaacag 956 |||| ||||| ||||||| |||||||||||||||||| || ||||| || |||||||| | Sbjct: 2005 caggcttggtggagatcaccgccaaggaggacagcttcgtcttcaccgtagaaacaaccg 2064 Query: 957 gcgccatcacagcctacgagctgattatgaatgctatcacggtcctgaggcagaagctgg 1016 ||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||| Sbjct: 2065 gcgccatcacagcctacgagctgatcatgaacgccatcacggtgctgaggcagaagctgg 2124 Query: 1017 acgccgttcgcct 1029 | ||||| ||||| Sbjct: 2125 atgccgtccgcct 2137 Score = 143 bits (72), Expect = 2e-30 Identities = 138/160 (86%) Strand = Plus / Plus Query: 582 acagaggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagcaattg 641 |||| |||||| | |||||||||||||| || |||||||| || | ||||| || || | Sbjct: 1693 acaggggcatacttattgtaaagctgcgtcgggggcaagaactaaggcttcgtgccatag 1752 Query: 642 ccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttca 701 | ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| |||| Sbjct: 1753 ctaggaaaggaattggcaaggaccatgccaaatggtcaccagctgctaccgtgactttca 1812 Query: 702 tgtatgagcctgatatacgtattaatcaagaactcatgga 741 ||||||||||||| |||||||| ||| ||||||| ||||| Sbjct: 1813 tgtatgagcctgacatacgtatcaatgaagaactaatgga 1852
>gb|BT018972.1| Zea mays clone Contig383.F mRNA sequence Length = 1275 Score = 369 bits (186), Expect = 2e-98 Identities = 350/404 (86%), Gaps = 3/404 (0%) Strand = Plus / Plus Query: 113 tcgtaccagcgcttcccgcgcgtgcggatccgcgagctcaaggacgagtacgccaagttc 172 |||||||||||||| || ||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 76 tcgtaccagcgctttccccgcgttcggatccgcgagctcaagtacgactacgccaagttc 135 Query: 173 gagctcaaggacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgag 232 || ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 136 gaactccgcgacaccgacgctagcatggccaacgccctccgccgcgtcatgatcgccgaa 195 Query: 233 gtccccaccgtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgac 292 ||||| || ||||||||||| ||||| ||||||||| ||||||||||||||||||||| Sbjct: 196 gtcccaactgtcgccatcgatctcgtagagatcgaggttaactcctccgtcctcaacgac 255 Query: 293 gagttcctcgcgcaccgcctcggcctcatcccgctcacctcctccggcgccatgtccatg 352 |||||| |||| ||||| || || |||||||||||||||||| ||| ||||||| ||| Sbjct: 256 gagttcatcgcccaccgtctggggctcatcccgctcacctccgccgccgccatgcaaatg 315 Query: 353 cgcttctcccgcgactgcgacgcctgtgacggggacggctcctgcgagcactgctccgtc 412 |||||||| || ||||||||||| || ||||| ||||||||||||||| ||||||||||| Sbjct: 316 cgcttctctcgggactgcgacgcttgcgacggcgacggctcctgcgagtactgctccgtc 375 Query: 413 gagttccacctcgctgcccgcgccaccgactccggccagacgctcgaggtcacctccacc 472 ||||| |||||| | | | |||||||||||| | |||||||||||||||||| | || Sbjct: 376 gagtttcacctctccgtgcacgccaccgactctgaccagacgctcgaggtcacat---cc 432 Query: 473 aaggacctccgctccaccgaccccaaggtctgccctgtcgacca 516 || ||||| | |||| ||||||||||||||||| |||||||| Sbjct: 433 aacgacctgagatccatggaccccaaggtctgcccagtcgacca 476 Score = 200 bits (101), Expect = 9e-48 Identities = 170/193 (88%) Strand = Plus / Plus Query: 837 acgcagaggcatacacatatgacgatgaggtgatcaagaaagcagaggccatggggaagc 896 |||| ||||||||||| || ||||| |||||||||||| | || |||||||| ||||||| Sbjct: 794 acgcggaggcatacacctacgacgacgaggtgatcaagcacgccgaggccatcgggaagc 853 Query: 897 caggattggtagagatcaacgccaaggaggacagctttgtgttcactgtggaaacaacag 956 |||| ||||| ||||||| |||||||||||||||||| || ||||| || |||||||| | Sbjct: 854 caggcttggtggagatcaccgccaaggaggacagcttcgtcttcaccgtagaaacaaccg 913 Query: 957 gcgccatcacagcctacgagctgattatgaatgctatcacggtcctgaggcagaagctgg 1016 | ||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||| Sbjct: 914 gtgccatcacagcctacgagctgatcatgaacgcgatcacggtgctgaggcagaagctgg 973 Query: 1017 acgccgttcgcct 1029 | ||||| ||||| Sbjct: 974 atgccgtccgcct 986 Score = 135 bits (68), Expect = 4e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 582 acagaggcatattaattgtaaagctgcgccgtgggcaagagctgcgtcttcgagcaattg 641 |||| |||||| | |||||||||||||| || || ||||| || | ||||| || || | Sbjct: 542 acaggggcatacttattgtaaagctgcgtcggggacaagaactaaggcttcgtgccatag 601 Query: 642 ccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttca 701 | ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| |||| Sbjct: 602 ctaggaaaggaattggcaaggaccatgccaaatggtcaccagctgctaccgtgactttca 661 Query: 702 tgtatgagcctgatatacgtattaatcaagaactcatgga 741 ||||||||||||| |||||||| ||| ||||||| ||||| Sbjct: 662 tgtatgagcctgacatacgtatcaatgaagaactaatgga 701
>gb|DQ122846.1| Medicago sativa clone NE5 DNA-directed RNA polymerase II third largest subunit mRNA, partial cds Length = 553 Score = 73.8 bits (37), Expect = 1e-09 Identities = 121/149 (81%) Strand = Plus / Plus Query: 182 gacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgaggtccccacc 241 ||||||||||| ||| | |||||||| ||||| ||||| ||||| |||| ||||| ||| Sbjct: 68 gacaccgacgccagcgtcgccaacgcgctccggcgcgtgatgatttccgaagtcccaacc 127 Query: 242 gtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgacgagttcctc 301 ||||||||||||| || || ||||| ||||| ||||| || |||||||||||| || Sbjct: 128 atcgccatcgaccttgttgaaatcgaagtgaactcttccgttctgaacgacgagttcatc 187 Query: 302 gcgcaccgcctcggcctcatcccgctcac 330 || ||| | ||||| ||||| || ||||| Sbjct: 188 gctcacagactcggtctcattccactcac 216 Score = 58.0 bits (29), Expect = 8e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 633 gagcaattgccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactg 692 |||| ||||| |||||||| || || ||||| |||||||||||||| ||||| || |||| Sbjct: 480 gagcgattgctaggaaggggatcggtaaggatcatgccaaatggtcaccagcagcaactg 539 Query: 693 tgaccttcatgta 705 | || |||||||| Sbjct: 540 ttactttcatgta 552
>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete sequence Length = 128810 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Minus Query: 182 gacaccgacgcgagcatggccaacgccctccgtcgcgtcatgatcgccgaggtccccacc 241 ||||| ||||| ||| | |||||||| || || ||||| |||||| |||| ||||| ||| Sbjct: 95692 gacactgacgccagcgtcgccaacgcgctacggcgcgtgatgatctccgaagtcccaacc 95633 Query: 242 gtcgccatcgacctcgtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 |||||||||||||| || || ||||| ||||| ||||| ||||||||||||||| Sbjct: 95632 gtcgccatcgaccttgttgaaatcgaagtgaactcttccgttctcaacgacgagttc 95576 Score = 65.9 bits (33), Expect = 3e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 633 gagcaattgccaggaagggaattggaaaggaccatgccaaatggtctccagctgctactg 692 |||| ||||| |||||||| || || ||||| |||||||||||||| |||||||| |||| Sbjct: 94259 gagcgattgctaggaaggggatcgggaaggatcatgccaaatggtcaccagctgcaactg 94200 Query: 693 tgaccttcatgta 705 | || |||||||| Sbjct: 94199 ttactttcatgta 94187
>dbj|AK228411.1| Arabidopsis thaliana mRNA for DNA-directed RNA polymerase II, third largest subunit, complete cds, clone: RAFL14-92-F19 Length = 1256 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||||||| | || ||| | ||| Sbjct: 183 atggccaacgctctccgtcgcgtaatgatctccgaagtccccaccatggcaatccatctc 242 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||| | |||||| || ||||| || ||||||||||||||| Sbjct: 243 gtcaaaatcgaggttaattcctctgttctcaacgacgagttc 284 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| |||||||| || || ||||| ||||||||||| || |||||||| || | ||| Sbjct: 594 aggaaaggaattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtatatg 653 Query: 704 tatgagcctga 714 ||||||||||| Sbjct: 654 tatgagcctga 664
>ref|NM_127103.2| Arabidopsis thaliana RBP36A; DNA binding / DNA-directed RNA polymerase (RBP36A) mRNA, complete cds Length = 1248 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||| |||||||| || || || Sbjct: 192 atggccaacgctctccgtcgcgtaatgatctccgaagtccctaccgtcgcaatagatcta 251 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||||| |||||| || || || || ||||||||||||||| Sbjct: 252 gtcgaaatcgaggttaattcatctgtactcaacgacgagttc 293 Score = 58.0 bits (29), Expect = 8e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| || ||||| || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 603 aggaaagggattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtttatg 662 Query: 704 tatgagcctgatatacgtattaatcaaga 732 ||||||||||| ||| ||||||| |||| Sbjct: 663 tatgagcctgacataattattaatgaaga 691
>ref|NM_127100.3| Arabidopsis thaliana RBP36B; DNA binding / DNA-directed RNA polymerase (RBP36B) mRNA, complete cds Length = 1246 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||||||| | || ||| | ||| Sbjct: 183 atggccaacgctctccgtcgcgtaatgatctccgaagtccccaccatggcaatccatctc 242 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||| | |||||| || ||||| || ||||||||||||||| Sbjct: 243 gtcaaaatcgaggttaattcctctgttctcaacgacgagttc 284 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| |||||||| || || ||||| ||||||||||| || |||||||| || | ||| Sbjct: 594 aggaaaggaattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtatatg 653 Query: 704 tatgagcctga 714 ||||||||||| Sbjct: 654 tatgagcctga 664
>gb|AY096406.1| Arabidopsis thaliana putative DNA-directed RNA polymerase II (At2g15430) mRNA, complete cds Length = 991 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||| |||||||| || || || Sbjct: 97 atggccaacgctctccgtcgcgtaatgatctccgaagtccctaccgtcgcaatagatcta 156 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||||| |||||| || || || || ||||||||||||||| Sbjct: 157 gtcgaaatcgaggttaattcatctgtactcaacgacgagttc 198 Score = 58.0 bits (29), Expect = 8e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| || ||||| || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 508 aggaaagggattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtttatg 567 Query: 704 tatgagcctgatatacgtattaatcaaga 732 ||||||||||| ||| ||||||| |||| Sbjct: 568 tatgagcctgacataattattaatgaaga 596
>gb|AY063965.1| Arabidopsis thaliana putative DNA-directed RNA polymerase II third largest subunit (At2g15430) mRNA, complete cds Length = 1264 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||| |||||||| || || || Sbjct: 192 atggccaacgctctccgtcgcgtaatgatctccgaagtccctaccgtcgcaatagatcta 251 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||||| |||||| || || || || ||||||||||||||| Sbjct: 252 gtcgaaatcgaggttaattcatctgtactcaacgacgagttc 293 Score = 58.0 bits (29), Expect = 8e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| || ||||| || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 603 aggaaagggattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtttatg 662 Query: 704 tatgagcctgatatacgtattaatcaaga 732 ||||||||||| ||| ||||||| |||| Sbjct: 663 tatgagcctgacataattattaatgaaga 691
>gb|AC006920.11| Arabidopsis thaliana chromosome 2 clone F26H6 map mi398, complete sequence Length = 89301 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||| |||||||| || || || Sbjct: 24474 atggccaacgctctccgtcgcgtaatgatctccgaagtccctaccgtcgcaatagatcta 24415 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||||| |||||| || || || || ||||||||||||||| Sbjct: 24414 gtcgaaatcgaggttaattcatctgtactcaacgacgagttc 24373 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||||||| | || ||| | ||| Sbjct: 45113 atggccaacgctctccgtcgcgtaatgatctccgaagtccccaccatggcaatccatctc 45054 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||| | |||||| || ||||| || ||||||||||||||| Sbjct: 45053 gtcaaaatcgaggttaattcctctgttctcaacgacgagttc 45012 Score = 58.0 bits (29), Expect = 8e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| || ||||| || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 23809 aggaaagggattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtttatg 23750 Query: 704 tatgagcctgatatacgtattaatcaaga 732 ||||||||||| ||| ||||||| |||| Sbjct: 23749 tatgagcctgacataattattaatgaaga 23721 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Minus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| |||||||| || || ||||| ||||||||||| || |||||||| || | ||| Sbjct: 44513 aggaaaggaattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtatatg 44454 Query: 704 tatgagcctga 714 ||||||||||| Sbjct: 44453 tatgagcctga 44443
>gb|BT006072.1| Arabidopsis thaliana clone U20126 putative DNA-directed RNA polymerase II, third largest subunit (At2g15400) mRNA, complete cds Length = 991 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||||||| | || ||| | ||| Sbjct: 97 atggccaacgctctccgtcgcgtaatgatctccgaagtccccaccatggcaatccatctc 156 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||| | |||||| || ||||| || ||||||||||||||| Sbjct: 157 gtcaaaatcgaggttaattcctctgttctcaacgacgagttc 198 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| |||||||| || || ||||| ||||||||||| || |||||||| || | ||| Sbjct: 508 aggaaaggaattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtatatg 567 Query: 704 tatgagcctga 714 ||||||||||| Sbjct: 568 tatgagcctga 578
>gb|BT005715.1| Arabidopsis thaliana clone RAFL14-92-F19 (R20126) putative DNA-directed RNA polymerase II, third largest subunit (At2g15400) mRNA, complete cds Length = 1262 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||||||| | || ||| | ||| Sbjct: 183 atggccaacgctctccgtcgcgtaatgatctccgaagtccccaccatggcaatccatctc 242 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||| | |||||| || ||||| || ||||||||||||||| Sbjct: 243 gtcaaaatcgaggttaattcctctgttctcaacgacgagttc 284 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| |||||||| || || ||||| ||||||||||| || |||||||| || | ||| Sbjct: 594 aggaaaggaattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtatatg 653 Query: 704 tatgagcctga 714 ||||||||||| Sbjct: 654 tatgagcctga 664
>emb|BX819183.1|CNS0A8X1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1191 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||||||| | || ||| | ||| Sbjct: 172 atggccaacgctctccgtcgcgtaatgatctccgaagtccccaccatggcaatccatctc 231 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||| | |||||| || ||||| || ||||||||||||||| Sbjct: 232 gtcaaaatcgaggttaattcctctgttctcaacgacgagttc 273 Score = 46.1 bits (23), Expect = 0.32 Identities = 59/71 (83%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| |||||||| || | ||||| ||||||||||| || |||||||| || | ||| Sbjct: 583 aggaaaggaattgggaaagttcatgcgaaatggtctcctgcagctactgttacgtatatg 642 Query: 704 tatgagcctga 714 ||||||||||| Sbjct: 643 tatgagcctga 653
>gb|L34770.1|ATHRPB3A Arabidopsis thaliana RNA polymerase II third largest subunit (RPB35.5A) gene, complete cds Length = 5031 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||| |||||||| || || || Sbjct: 2314 atggccaacgctctccgtcgcgtaatgatctccgaagtccctaccgtcgcaatagatcta 2373 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||||| |||||| || || || || ||||||||||||||| Sbjct: 2374 gtcgaaatcgaggttaattcatctgtactcaacgacgagttc 2415 Score = 58.0 bits (29), Expect = 8e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| || ||||| || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 2979 aggaaagggattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtttatg 3038 Query: 704 tatgagcctgatatacgtattaatcaaga 732 ||||||||||| ||| ||||||| |||| Sbjct: 3039 tatgagcctgacataattattaatgaaga 3067
>gb|L34771.1|ATHRPIT Arabidopsis thaliana RNA polymerase II third largest subunit gene, complete cds Length = 3764 Score = 67.9 bits (34), Expect = 9e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||||||| | || ||| | ||| Sbjct: 2296 atggccaacgctctccgtcgcgtaatgatctccgaagtccccaccatggcaatccatctc 2355 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||| | |||||| || ||||| || ||||||||||||||| Sbjct: 2356 gtcaaaatcgaggttaattcctctgttctcaacgacgagttc 2397 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| |||||||| || || ||||| ||||||||||| || |||||||| || | ||| Sbjct: 2896 aggaaaggaattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtatatg 2955 Query: 704 tatgagcctga 714 ||||||||||| Sbjct: 2956 tatgagcctga 2966
>emb|CT986467.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 650 Score = 61.9 bits (31), Expect = 5e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 752 cttgaggaaaaacaaagctgggtggagagcagccctacaaaagtatttgacattgatcc 810 ||||||||||||||||| |||||||| ||||| || || ||||| |||||||| ||||| Sbjct: 88 cttgaggaaaaacaaagttgggtggaaagcagtcccaccaaagtgtttgacatcgatcc 146
>gb|AY087783.1| Arabidopsis thaliana clone 3839 mRNA, complete sequence Length = 1240 Score = 60.0 bits (30), Expect = 2e-05 Identities = 84/102 (82%) Strand = Plus / Plus Query: 197 atggccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctc 256 ||||||||||| ||||||||||| |||||| |||| ||||| || ||||| || || || Sbjct: 192 atggccaacgctctccgtcgcgtaatgatctccgaagtccctacggtcgcaatagatcta 251 Query: 257 gtcgagatcgagagcaactcctccgtcctcaacgacgagttc 298 ||||| |||||| || || || || ||||||||||||||| Sbjct: 252 gtcgaaatcgaggttaattcatctgtactcaacgacgagttc 293 Score = 58.0 bits (29), Expect = 8e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 644 aggaagggaattggaaaggaccatgccaaatggtctccagctgctactgtgaccttcatg 703 ||||| || ||||| || || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 603 aggaaagggattgggaaagatcatgcgaaatggtctcctgcagctactgttacgtttatg 662 Query: 704 tatgagcctgatatacgtattaatcaaga 732 ||||||||||| ||| ||||||| |||| Sbjct: 663 tatgagcctgacataattattaatgaaga 691
>emb|AL670003.1|NCB9G16 Neurospora crassa DNA linkage group II BAC clone B9G16 Length = 69187 Score = 50.1 bits (25), Expect = 0.020 Identities = 58/69 (84%) Strand = Plus / Minus Query: 200 gccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctcgtc 259 |||||| |||| |||||||||||| | |||||| | ||||| | |||||||| || ||| Sbjct: 7946 gccaactcccttcgtcgcgtcatgcttgccgagattcccacgattgccatcgatctagtc 7887 Query: 260 gagatcgag 268 ||||||||| Sbjct: 7886 gagatcgag 7878
>emb|AL355932.1|NCB5O22 Neurospora crassa DNA linkage group II BAC clone B5O22 Length = 58349 Score = 50.1 bits (25), Expect = 0.020 Identities = 58/69 (84%) Strand = Plus / Plus Query: 200 gccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctcgtc 259 |||||| |||| |||||||||||| | |||||| | ||||| | |||||||| || ||| Sbjct: 15902 gccaactcccttcgtcgcgtcatgcttgccgagattcccacgattgccatcgatctagtc 15961 Query: 260 gagatcgag 268 ||||||||| Sbjct: 15962 gagatcgag 15970
>ref|XM_951871.1| Neurospora crassa OR74A probable DNA-directed RNA polymerase [MIPS] (NCU01515.1) partial mRNA Length = 1014 Score = 50.1 bits (25), Expect = 0.020 Identities = 58/69 (84%) Strand = Plus / Plus Query: 200 gccaacgccctccgtcgcgtcatgatcgccgaggtccccaccgtcgccatcgacctcgtc 259 |||||| |||| |||||||||||| | |||||| | ||||| | |||||||| || ||| Sbjct: 118 gccaactcccttcgtcgcgtcatgcttgccgagattcccacgattgccatcgatctagtc 177 Query: 260 gagatcgag 268 ||||||||| Sbjct: 178 gagatcgag 186
>ref|XM_001208643.1| Aspergillus terreus NIH2624 DNA-directed RNA polymerase II 45 kDa polypeptide (ATEG_01278) mRNA, complete cds Length = 996 Score = 48.1 bits (24), Expect = 0.080 Identities = 36/40 (90%) Strand = Plus / Plus Query: 290 gacgagttcctcgcgcaccgcctcggcctcatcccgctca 329 |||||||||||||||||||| || || || |||||||||| Sbjct: 199 gacgagttcctcgcgcaccggctggggctgatcccgctca 238
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 250 cgacctcgtcgagatcgagagc 271 |||||||||||||||||||||| Sbjct: 5508603 cgacctcgtcgagatcgagagc 5508624
>ref|XM_364439.1| Magnaporthe grisea 70-15 hypothetical protein (MG09284.4) partial mRNA Length = 1122 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 219 tcatgatcgccgaggtccccaccgtcgccatcga 252 |||||||||||||| ||||| || |||||||||| Sbjct: 248 tcatgatcgccgagatcccctccctcgccatcga 281
>ref|XM_750548.1| Aspergillus fumigatus Af293 RNA polymerase II subunit 3 (Afu2g13090) partial mRNA Length = 1179 Score = 44.1 bits (22), Expect = 1.2 Identities = 67/82 (81%) Strand = Plus / Plus Query: 248 atcgacctcgtcgagatcgagagcaactcctccgtcctcaacgacgagttcctcgcgcac 307 |||||||| |||||| |||| | ||| ||||||| ||| |||||| |||||||| ||| Sbjct: 322 atcgacctggtcgaggtcgaaaagaacacctccgtactccccgacgaattcctcgcccac 381 Query: 308 cgcctcggcctcatcccgctca 329 | || ||||||||||| |||| Sbjct: 382 agactgggcctcatcccactca 403
>emb|BX927334.17| Zebrafish DNA sequence from clone CH211-112H5 in linkage group 21, complete sequence Length = 183608 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 582 acagaggcatattaattgtaaagctg 607 |||||||||||||||||| ||||||| Sbjct: 152164 acagaggcatattaattgcaaagctg 152139
>emb|AJ783761.1| Papilio dardanus mRNA for ribosomal protein S13e (rpS13e gene) Length = 456 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 867 tgatcaagaaagcagaggccatggggaagc 896 ||||||||||||||| ||||||| |||||| Sbjct: 272 tgatcaagaaagcagtggccatgaggaagc 301
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ctcgctgcccgcgccaccgac 442 ||||||||||||||||||||| Sbjct: 4627222 ctcgctgcccgcgccaccgac 4627242
>ref|XM_001229981.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_03466) mRNA, complete cds Length = 1143 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 caccgcctcggcctcatcccg 325 ||||||||||||||||||||| Sbjct: 967 caccgcctcggcctcatcccg 987
>gb|AC004408.2| Homo sapiens chromosome 17, clone RP5-906A24, complete sequence Length = 113250 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1089 tttgtctgggaaagaaatgggcagc 1113 ||||||||||||||| ||||||||| Sbjct: 91841 tttgtctgggaaagagatgggcagc 91817
>gb|AC102103.10| Mus musculus chromosome 15, clone RP23-82K1, complete sequence Length = 237423 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 880 agaggccatggggaagccagg 900 ||||||||||||||||||||| Sbjct: 89325 agaggccatggggaagccagg 89305
>gb|DQ214332.1| Taeniopygia guttata clone 0058P0016F05 DNA directed RNA polymerase II polypeptide C-like mRNA, complete sequence Length = 1328 Score = 42.1 bits (21), Expect = 4.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 271 caactcctccgtcctcaacgacgagttcctcgcgcaccgcctcggcctcatcccgctcac 330 |||||||||||| ||| |||| |||||| | || ||| | || || |||||||||||||| Sbjct: 277 caactcctccgtgctccacgatgagttcattgcacacaggctgggtctcatcccgctcac 336 Query: 331 c 331 | Sbjct: 337 c 337
>ref|XM_458009.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C08371g) partial mRNA Length = 936 Score = 42.1 bits (21), Expect = 4.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 638 attgccaggaagggaattggaaaggaccatgccaaatggtc 678 ||||||| |||||| |||| ||||| |||||||||||||| Sbjct: 481 attgccaagaagggtattgctaaggaacatgccaaatggtc 521
>gb|AC015910.10| Homo sapiens chromosome 17, clone RP11-690G19, complete sequence Length = 90476 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1089 tttgtctgggaaagaaatgggcagc 1113 ||||||||||||||| ||||||||| Sbjct: 88332 tttgtctgggaaagagatgggcagc 88356
>dbj|AB209176.1| Homo sapiens mRNA for calcium channel, voltage-dependent, beta 1 subunit isoform 1 variant protein Length = 5308 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1089 tttgtctgggaaagaaatgggcagc 1113 ||||||||||||||| ||||||||| Sbjct: 1047 tttgtctgggaaagagatgggcagc 1071
>emb|AL080278.7|HSDJ691N7 Human DNA sequence from clone RP4-691N7 on chromosome 1p31.2-32.3 Contains ESTs, CA repeat (D1S2665), STSs and GSSs, complete sequence Length = 104513 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 580 ccacagaggcatattaattgtaaag 604 |||||||||||||||| |||||||| Sbjct: 29664 ccacagaggcatattatttgtaaag 29688
>emb|AL024508.1|HS325F22 Human DNA sequence from clone RP3-325F22 on chromosome 6q23.1-24.3 Contains the 3' end of the MAP3K5 gene for mitogen-activated protein kinase kinase kinase 5 (ASK1, MEKK5, MAPKKK5), a novel gene and a CpG island, complete sequence Length = 154788 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 750 cacttgaggaaaaacaaagct 770 ||||||||||||||||||||| Sbjct: 30202 cacttgaggaaaaacaaagct 30182
>gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, complete sequence Length = 208509 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 880 agaggccatggggaagccagg 900 ||||||||||||||||||||| Sbjct: 19631 agaggccatggggaagccagg 19651
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 42.1 bits (21), Expect = 4.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 638 attgccaggaagggaattggaaaggaccatgccaaatggtc 678 ||||||| |||||| |||| ||||| |||||||||||||| Sbjct: 686635 attgccaagaagggtattgctaaggaacatgccaaatggtc 686675
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 859 cgatgaggtgatcaagaaagc 879 ||||||||||||||||||||| Sbjct: 880713 cgatgaggtgatcaagaaagc 880693
>emb|Z78979.1|HSPA20A6 H.sapiens flow-sorted chromosome 6 HindIII fragment, SC6pA20A6 Length = 433 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 750 cacttgaggaaaaacaaagct 770 ||||||||||||||||||||| Sbjct: 273 cacttgaggaaaaacaaagct 293 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 199,545,175 Number of extensions: 11874950 Number of successful extensions: 242919 Number of sequences better than 10.0: 48 Number of HSP's gapped: 242895 Number of HSP's successfully gapped: 82 Length of query: 1297 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1274 Effective length of database: 18,503,978,556 Effective search space: 23574068680344 Effective search space used: 23574068680344 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
