ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96p01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073962:Os04g0659900 333 2e-91
2AK060780:Os04g0659900 300 2e-81
3Os10g0546200:Os10g0546200 29 8.0
4Os04g0601500:Os04g0601500 29 8.0

>AK073962:Os04g0659900 |
          Length = 187
 Score =  333 bits (855), Expect = 2e-91
 Identities = 165/187 (88%), Positives = 178/187 (95%)
 Frame = +1

Query: 715  ALLKHIDFEVVQCVVIASPGFTKDQFRDYMHLEAARRDLRVIIENKSRIILAHAPSGYKH 894
            A LKHIDFEVVQC VIASPGFTKDQFRDYMHLEAARRDLR+IIENK RI+LAHAPSGYKH
Sbjct: 1    AFLKHIDFEVVQCAVIASPGFTKDQFRDYMHLEAARRDLRLIIENKQRIVLAHAPSGYKH 60

Query: 895  SLKEVLDTPGVMSLIKDTKAAQEVQALKEFFAMLTNDSARACYGPKHVEVAHERLAIQTL 1074
            SLKEVLD+P VM+LIKDTKAAQEVQALK+FF MLTNDSARACYGPKHVE+A+ERLAIQTL
Sbjct: 61   SLKEVLDSPSVMTLIKDTKAAQEVQALKDFFNMLTNDSARACYGPKHVEIANERLAIQTL 120

Query: 1075 LMTDTLFRNTDIVSRRKYVNLVESVKKYGGTVHIFSSMHVSGDQLAQLTGIAAILRFPLP 1254
            L+TD LFRN+DI +R+ YV LVESVKK+GGTVHIFSSMHVSG+QLAQLTGIAAILRFPLP
Sbjct: 121  LITDNLFRNSDIATRQNYVRLVESVKKFGGTVHIFSSMHVSGEQLAQLTGIAAILRFPLP 180

Query: 1255 DLEDIEM 1275
            DLEDIEM
Sbjct: 181  DLEDIEM 187



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>AK060780:Os04g0659900 |
          Length = 252

 Score =  300 bits (768), Expect = 2e-81
 Identities = 149/168 (88%), Positives = 158/168 (94%)
 Frame = +1

Query: 187 AKLLPEEEDDLWHAYNLIAVGDSLQAVTVRKVLRDSASGGRDAERVKLKLEIVVESVDYD 366
           A+L+PEEEDDLWHAYNLI  GD+LQ+VTVRKVLR+ ASGGRDAERV+LKLEIVVESVDYD
Sbjct: 70  AQLVPEEEDDLWHAYNLIVPGDTLQSVTVRKVLREMASGGRDAERVRLKLEIVVESVDYD 129

Query: 367 KEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKEYWDWLALDTIQQACDPTASA 546
           KEG+VLRVRGKNITENDHVKIGQFHT+ELELKR F L KE WDWLALDTIQQACDPTASA
Sbjct: 130 KEGSVLRVRGKNITENDHVKIGQFHTVELELKRQFTLTKELWDWLALDTIQQACDPTASA 189

Query: 547 DLAVILMQEGLAHLFLIGRSITATRSRIETSIPRKHGPAIAGYESALK 690
           DLAVILMQEGLAHLFLIGRSIT TR+RIETSIPRKHGPAIAGYES  K
Sbjct: 190 DLAVILMQEGLAHLFLIGRSITVTRARIETSIPRKHGPAIAGYESVWK 237



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>Os10g0546200:Os10g0546200 |
          Length = 1012

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
 Frame = +1

Query: 877  PSGYKHSLKEVLDTPGVMSLIKDTKAAQEVQALKEFFAMLTNDSARACYGPKHVEVAHER 1056
            P  Y   L   LDT   + +   + +  ++ A K + +  T +SAR  YG K  +V    
Sbjct: 271  PDSYLPLLHSALDTGNFLVI---SGSPVDILATKRYSSSHTQESARNQYGSKEDDVV--V 325

Query: 1057 LAIQTLLMTDTLFRNTDIVSRRKYVNLVESVK-KYGGTVHIFSSMHVSGDQLAQLTGIAA 1233
            L + + L  D L  +   V R    ++++  K K  G   IF   + +    +    +A+
Sbjct: 326  LVVGSYLFFDELPWDFATVLRASAPHIMDMAKTKNLGVQFIFFCGNDTDAYNSAFQELAS 385

Query: 1234 ILRFPLPDLEDIEM*LVQSLRSCLTF 1311
             + FPL  ++     L   +R+ L F
Sbjct: 386  HMGFPLGSVKHFS--LTHDIRNLLVF 409



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>Os04g0601500:Os04g0601500 |
          Length = 435

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +1

Query: 772 GFTKDQFRDYMHLEAARRDLRVIIENKSRIILAHAP 879
           G T ++FR  + +E  R+DLR+++ NK+ + +  AP
Sbjct: 354 GITLEEFRRLI-MEWVRKDLRLVLANKAAVAIMAAP 388


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 38,289,716
Number of extensions: 807472
Number of successful extensions: 2131
Number of sequences better than 10.0: 4
Number of HSP's gapped: 2130
Number of HSP's successfully gapped: 4
Length of query: 520
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 415
Effective length of database: 11,195,550
Effective search space: 4646153250
Effective search space used: 4646153250
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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