ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96p01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072B10, full insert sequence Length = 2773 Score = 519 bits (262), Expect = e-144 Identities = 493/570 (86%) Strand = Plus / Plus Query: 710 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 769 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 2028 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 2087 Query: 770 caggttttactaaggatcagtttcgtgattacatgcatcttgaagctgcacggcgagact 829 |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 2088 caggttttactaaggatcagttccgcgattatatgcatcttgaagctgcacggcgagact 2147 Query: 830 tgagagtaataattgagaataaatcacgcattattcttgcacatgcaccttcaggctaca 889 | ||| ||||||||||||| ||| |||||| |||||||||||||||||||||| |||| Sbjct: 2148 taagattaataattgagaacaaacagcgcattgttcttgcacatgcaccttcaggttaca 2207 Query: 890 agcatagtttgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaa 949 ||||||| |||||||||||||||| | |||| |||||||| |||| ||||||||||||| Sbjct: 2208 agcatagcctgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaa 2267 Query: 950 aagcggcacaggaggtgcaagctttgaaagagttcttcgctatgcttactaatgactcag 1009 | ||||| |||||||| ||||||||||| || |||||| |||||||| ||||| |||| Sbjct: 2268 aggcggcgcaggaggtccaagctttgaaggacttcttcaacatgcttacaaatgattcag 2327 Query: 1010 cccgagcgtgttatggacctaagcatgttgaggtcgcacatgagcgccttgcaatacaaa 1069 | ||||| |||||||||||||||||||||||| | ||| |||| || ||||| || |||| Sbjct: 2328 ctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatccaaa 2387 Query: 1070 ctcttctgatgacagatactttgtttcggaacacggacatcgttagcaggagaaagtatg 1129 ||||| | || ||||||| ||||||||||||| | ||||| | | ||| ||| |||| Sbjct: 2388 ctcttttaataacagataatttgtttcggaactctgacattgcaacgaggcaaaattatg 2447 Query: 1130 tgaacttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgc 1189 || ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||| Sbjct: 2448 tgcgcttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgc 2507 Query: 1190 atgtctccggcgaccaattggcgcagttgacaggaatagcagctatacttcgattccccc 1249 ||||||| || || || |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 2508 atgtctctggtgaacagttggcgcagttgacaggaatcgcagctatacttcgatttccct 2567 Query: 1250 tgccagatttggaggacatcgagatgtgat 1279 |||||||||| |||||||| |||||||||| Sbjct: 2568 tgccagatttagaggacattgagatgtgat 2597 Score = 283 bits (143), Expect = 9e-73 Identities = 331/391 (84%), Gaps = 2/391 (0%) Strand = Plus / Plus Query: 140 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaagctgctgc 199 |||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||| ||| Sbjct: 150 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaagctggtgc 209 Query: 200 cggaggaggaggacgacctgtggcacgcgtacaatctcatcgccgtcggggacagcctcc 259 ||||||||||||||||||||||||| || ||||| || || | ||||| | ||||| Sbjct: 210 cggaggaggaggacgacctgtggcatgcctacaaccttattgttccgggggataccctcc 269 Query: 260 aggccgtcactgtccggaaagttctcagggattctgcttctggtgggcgtgatgcggagc 319 || |||||||||| |||||||||| || || || ||||| || |||||||| |||| Sbjct: 270 agtccgtcactgtgaggaaagttctgagagagatggcatctggaggacgtgatgctgagc 329 Query: 320 gcgtgaagctcaagttggaaattgtagttgagtctgtagattatgacaaggaggggaatg 379 | |||| | | ||||||||||||||||| ||||||||||||||||| |||||||| || Sbjct: 330 gtgtgaggttaaagttggaaattgtagtcgagtctgtagattatgataaggagggatctg 389 Query: 380 ttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtttc 439 | ||||| || ||||| |||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 390 tcttgcgtgtacgtggaaaaaatataactgagaacgatcatgtgaagattggacagtttc 449 Query: 440 atactttagaacttgagctgaagagac-cttttgttctacgaaaggaatattgggattgg 498 ||||| | || |||||||||||||||| ||| || ||| |||||| |||||||||| Sbjct: 450 atactgtggagcttgagctgaagagacaatttactttgacg-aaggaactttgggattgg 508 Query: 499 ttagcacttgataccatccaacaagcatgtg 529 ||||| ||||||||||||||||||||||||| Sbjct: 509 ttagctcttgataccatccaacaagcatgtg 539 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 535 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 594 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 1494 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 1553 Query: 595 attgggagaag 605 ||||| ||||| Sbjct: 1554 attggtagaag 1564 Score = 48.1 bits (24), Expect = 0.096 Identities = 57/68 (83%) Strand = Plus / Plus Query: 604 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 663 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 1762 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 1821 Query: 664 attgctgg 671 |||||||| Sbjct: 1822 attgctgg 1829 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 685 ctcaagaagttctttgagcatgttttacaag 715 ||||||||||||||||| |||||||| |||| Sbjct: 1921 ctcaagaagttctttgaacatgttttgcaag 1951
>ref|NM_001060674.1| Oryza sativa (japonica cultivar-group) Os04g0659900 (Os04g0659900) mRNA, partial cds Length = 1691 Score = 345 bits (174), Expect = 3e-91 Identities = 407/482 (84%), Gaps = 2/482 (0%) Strand = Plus / Plus Query: 191 agctgctgccggaggaggaggacgacctgtggcacgcgtacaatctcatcgccgtcgggg 250 ||||| |||||||||||||||||||||||||||| || ||||| || || | |||| Sbjct: 213 agctggtgccggaggaggaggacgacctgtggcatgcctacaaccttattgttccggggg 272 Query: 251 acagcctccaggccgtcactgtccggaaagttctcagggattctgcttctggtgggcgtg 310 | | ||||||| |||||||||| |||||||||| || || || ||||| || |||| Sbjct: 273 ataccctccagtccgtcactgtgaggaaagttctgagagagatggcatctggaggacgtg 332 Query: 311 atgcggagcgcgtgaagctcaagttggaaattgtagttgagtctgtagattatgacaagg 370 |||| ||||| |||| | | ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 333 atgctgagcgtgtgaggttaaagttggaaattgtagtcgagtctgtagattatgataagg 392 Query: 371 aggggaatgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattg 430 |||| ||| ||||| || ||||| |||||||| |||||||| ||||| |||||||||| Sbjct: 393 agggatctgtcttgcgtgtacgtggaaaaaatataactgagaacgatcatgtgaagattg 452 Query: 431 gccagtttcatactttagaacttgagctgaagagaccttttgttct-acgaaaggaatat 489 | |||||||||||| | || |||||||||||||||| ||| | | ||||| |||| | Sbjct: 453 gacagtttcatactgtggagcttgagctgaagagacaatttactttgacgaa-ggaactt 511 Query: 490 tgggattggttagcacttgataccatccaacaagcatgtgatcctactgcaagtgctgat 549 |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 512 tgggattggttagctcttgataccatccaacaagcatgtgacccaactgcaagtgctgat 571 Query: 550 ctagcagttattcttatgcaagaaggacttgcccacttattccttattgggagaagcata 609 |||||||||||||| ||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 572 ctagcagttattctcatgcaagaaggacttgcacatttgttcctcattggtagaagcata 631 Query: 610 acagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgccattgct 669 |||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| |||||| Sbjct: 632 acagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcgattgct 691 Query: 670 gg 671 || Sbjct: 692 gg 693 Score = 321 bits (162), Expect = 4e-84 Identities = 249/278 (89%) Strand = Plus / Plus Query: 710 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 769 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 892 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 951 Query: 770 caggttttactaaggatcagtttcgtgattacatgcatcttgaagctgcacggcgagact 829 |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 952 caggttttactaaggatcagttccgcgattatatgcatcttgaagctgcacggcgagact 1011 Query: 830 tgagagtaataattgagaataaatcacgcattattcttgcacatgcaccttcaggctaca 889 | ||| ||||||||||||| ||| |||||| |||||||||||||||||||||| |||| Sbjct: 1012 taagattaataattgagaacaaacagcgcattgttcttgcacatgcaccttcaggttaca 1071 Query: 890 agcatagtttgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaa 949 ||||||| |||||||||||||||| | |||| |||||||| |||| ||||||||||||| Sbjct: 1072 agcatagcctgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaa 1131 Query: 950 aagcggcacaggaggtgcaagctttgaaagagttcttc 987 | ||||| |||||||| ||||||||||| || |||||| Sbjct: 1132 aggcggcgcaggaggtccaagctttgaaggacttcttc 1169 Score = 202 bits (102), Expect = 3e-48 Identities = 231/274 (84%) Strand = Plus / Plus Query: 1006 tcagcccgagcgtgttatggacctaagcatgttgaggtcgcacatgagcgccttgcaata 1065 ||||| ||||| |||||||||||||||||||||||| | ||| |||| || ||||| || Sbjct: 1259 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 1318 Query: 1066 caaactcttctgatgacagatactttgtttcggaacacggacatcgttagcaggagaaag 1125 ||||||||| | || ||||||| ||||||||||||| | ||||| | | ||| ||| Sbjct: 1319 caaactcttttaataacagataatttgtttcggaactctgacattgcaacgaggcaaaat 1378 Query: 1126 tatgtgaacttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcg 1185 |||||| ||||||||| || || || |||| ||||| ||||||||||| |||||||| Sbjct: 1379 tatgtgcgcttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttca 1438 Query: 1186 atgcatgtctccggcgaccaattggcgcagttgacaggaatagcagctatacttcgattc 1245 ||||||||||| || || || |||||||||||||||||||| ||||||||||||||||| Sbjct: 1439 atgcatgtctctggtgaacagttggcgcagttgacaggaatcgcagctatacttcgattt 1498 Query: 1246 cccctgccagatttggaggacatcgagatgtgat 1279 ||| |||||||||| |||||||| |||||||||| Sbjct: 1499 cccttgccagatttagaggacattgagatgtgat 1532 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 140 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 192 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 139 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 191 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 685 ctcaagaagttctttgagcatgttttacaag 715 ||||||||||||||||| |||||||| |||| Sbjct: 785 ctcaagaagttctttgaacatgttttgcaag 815
>dbj|AK060780.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-C05, full insert sequence Length = 1691 Score = 345 bits (174), Expect = 3e-91 Identities = 407/482 (84%), Gaps = 2/482 (0%) Strand = Plus / Plus Query: 191 agctgctgccggaggaggaggacgacctgtggcacgcgtacaatctcatcgccgtcgggg 250 ||||| |||||||||||||||||||||||||||| || ||||| || || | |||| Sbjct: 213 agctggtgccggaggaggaggacgacctgtggcatgcctacaaccttattgttccggggg 272 Query: 251 acagcctccaggccgtcactgtccggaaagttctcagggattctgcttctggtgggcgtg 310 | | ||||||| |||||||||| |||||||||| || || || ||||| || |||| Sbjct: 273 ataccctccagtccgtcactgtgaggaaagttctgagagagatggcatctggaggacgtg 332 Query: 311 atgcggagcgcgtgaagctcaagttggaaattgtagttgagtctgtagattatgacaagg 370 |||| ||||| |||| | | ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 333 atgctgagcgtgtgaggttaaagttggaaattgtagtcgagtctgtagattatgataagg 392 Query: 371 aggggaatgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattg 430 |||| ||| ||||| || ||||| |||||||| |||||||| ||||| |||||||||| Sbjct: 393 agggatctgtcttgcgtgtacgtggaaaaaatataactgagaacgatcatgtgaagattg 452 Query: 431 gccagtttcatactttagaacttgagctgaagagaccttttgttct-acgaaaggaatat 489 | |||||||||||| | || |||||||||||||||| ||| | | ||||| |||| | Sbjct: 453 gacagtttcatactgtggagcttgagctgaagagacaatttactttgacgaa-ggaactt 511 Query: 490 tgggattggttagcacttgataccatccaacaagcatgtgatcctactgcaagtgctgat 549 |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 512 tgggattggttagctcttgataccatccaacaagcatgtgacccaactgcaagtgctgat 571 Query: 550 ctagcagttattcttatgcaagaaggacttgcccacttattccttattgggagaagcata 609 |||||||||||||| ||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 572 ctagcagttattctcatgcaagaaggacttgcacatttgttcctcattggtagaagcata 631 Query: 610 acagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgccattgct 669 |||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| |||||| Sbjct: 632 acagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcgattgct 691 Query: 670 gg 671 || Sbjct: 692 gg 693 Score = 321 bits (162), Expect = 4e-84 Identities = 249/278 (89%) Strand = Plus / Plus Query: 710 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 769 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 892 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 951 Query: 770 caggttttactaaggatcagtttcgtgattacatgcatcttgaagctgcacggcgagact 829 |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 952 caggttttactaaggatcagttccgcgattatatgcatcttgaagctgcacggcgagact 1011 Query: 830 tgagagtaataattgagaataaatcacgcattattcttgcacatgcaccttcaggctaca 889 | ||| ||||||||||||| ||| |||||| |||||||||||||||||||||| |||| Sbjct: 1012 taagattaataattgagaacaaacagcgcattgttcttgcacatgcaccttcaggttaca 1071 Query: 890 agcatagtttgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaa 949 ||||||| |||||||||||||||| | |||| |||||||| |||| ||||||||||||| Sbjct: 1072 agcatagcctgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaa 1131 Query: 950 aagcggcacaggaggtgcaagctttgaaagagttcttc 987 | ||||| |||||||| ||||||||||| || |||||| Sbjct: 1132 aggcggcgcaggaggtccaagctttgaaggacttcttc 1169 Score = 202 bits (102), Expect = 3e-48 Identities = 231/274 (84%) Strand = Plus / Plus Query: 1006 tcagcccgagcgtgttatggacctaagcatgttgaggtcgcacatgagcgccttgcaata 1065 ||||| ||||| |||||||||||||||||||||||| | ||| |||| || ||||| || Sbjct: 1259 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 1318 Query: 1066 caaactcttctgatgacagatactttgtttcggaacacggacatcgttagcaggagaaag 1125 ||||||||| | || ||||||| ||||||||||||| | ||||| | | ||| ||| Sbjct: 1319 caaactcttttaataacagataatttgtttcggaactctgacattgcaacgaggcaaaat 1378 Query: 1126 tatgtgaacttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcg 1185 |||||| ||||||||| || || || |||| ||||| ||||||||||| |||||||| Sbjct: 1379 tatgtgcgcttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttca 1438 Query: 1186 atgcatgtctccggcgaccaattggcgcagttgacaggaatagcagctatacttcgattc 1245 ||||||||||| || || || |||||||||||||||||||| ||||||||||||||||| Sbjct: 1439 atgcatgtctctggtgaacagttggcgcagttgacaggaatcgcagctatacttcgattt 1498 Query: 1246 cccctgccagatttggaggacatcgagatgtgat 1279 ||| |||||||||| |||||||| |||||||||| Sbjct: 1499 cccttgccagatttagaggacattgagatgtgat 1532 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 140 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 192 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 139 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 191 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 685 ctcaagaagttctttgagcatgttttacaag 715 ||||||||||||||||| |||||||| |||| Sbjct: 785 ctcaagaagttctttgaacatgttttgcaag 815
>gb|AY108442.1| Zea mays PCO132170 mRNA sequence Length = 580 Score = 244 bits (123), Expect = 8e-61 Identities = 309/371 (83%) Strand = Plus / Plus Query: 871 catgcaccttcaggctacaagcatagtttgaaggaagttttggacaccccaggtgtgatg 930 |||||| | ||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 20 catgcaacatcaggttacaagcatagtttaaaggaagttttggacacaccaggtgtgatg 79 Query: 931 tcactgataaaagatacaaaagcggcacaggaggtgcaagctttgaaagagttcttcgct 990 |||||||||||||||||||||| ||||||||||| | |||| || | || |||||| | Sbjct: 80 gcactgataaaagatacaaaagcagcacaggaggtccgagctctgcaggatttcttcaat 139 Query: 991 atgcttactaatgactcagcccgagcgtgttatggacctaagcatgttgaggtcgcacat 1050 |||||||||||||| ||||| || || ||||||||||| |||||||||||| | |||| Sbjct: 140 atgcttactaatgagtcagctcgtgcttgttatggaccgaagcatgttgagtttgcactg 199 Query: 1051 gagcgccttgcaatacaaactcttctgatgacagatactttgtttcggaacacggacatc 1110 | | |||| || || |||||| | || || |||||||||||||||||| | ||||| Sbjct: 200 caacagtttgctatccagactcttttaataactgatactttgtttcggaacgctgacatt 259 Query: 1111 gttagcaggagaaagtatgtgaacttggttgagtcagtcaagaaatatggtggtacagtg 1170 | || ||| || ||| ||||| |||||||| ||||||||| || |||| ||||| Sbjct: 260 gctacgaggcaaaggtacgtgaagttggttgaagatgtcaagaaaaatagtggcacagta 319 Query: 1171 cacatattttcttcgatgcatgtctccggcgaccaattggcgcagttgacaggaatagca 1230 ||||||||||| |||||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 320 cacatattttcctcgatgcatgtctcgggcgaacagttggcgcaactgacaggaatagcg 379 Query: 1231 gctatacttcg 1241 ||||||||||| Sbjct: 380 gctatacttcg 390
>emb|CR855224.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0132E09-OSIGBa0108L24, complete sequence Length = 130140 Score = 131 bits (66), Expect = 8e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 782 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 841 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 112434 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 112493 Query: 842 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaag 891 ||||||| ||| |||||| |||||||||||||||||||||| |||||| Sbjct: 112494 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaag 112543 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 350 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 409 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 108835 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatatcactg 108894 Query: 410 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 466 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 108895 agaacgatcatgtgaagattggacagtttcatactatggagcttgagctgaagagac 108951 Score = 105 bits (53), Expect = 5e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 1207 ttggcgcagttgacaggaatagcagctatacttcgattccccctgccagatttggaggac 1266 |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| Sbjct: 114561 ttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccagatttagaggac 114620 Query: 1267 atcgagatgtgat 1279 || |||||||||| Sbjct: 114621 attgagatgtgat 114633 Score = 101 bits (51), Expect = 7e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 710 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 769 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 112081 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 112140 Query: 770 caggttttactaagg 784 ||||||||||||||| Sbjct: 112141 caggttttactaagg 112155 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 535 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 594 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 111547 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 111606 Query: 595 attgggagaag 605 ||||| ||||| Sbjct: 111607 attggtagaag 111617 Score = 81.8 bits (41), Expect = 7e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 1006 tcagcccgagcgtgttatggacctaagcatgttgaggtcgcacatgagcgccttgcaata 1065 ||||| ||||| |||||||||||||||||||||||| | ||| |||| || ||||| || Sbjct: 113954 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 114013 Query: 1066 caaactcttctgatgacagatactttgtttcgg 1098 ||||||||| | || ||||||| |||||||||| Sbjct: 114014 caaactcttttaataacagataatttgtttcgg 114046 Score = 77.8 bits (39), Expect = 1e-10 Identities = 60/67 (89%) Strand = Plus / Plus Query: 899 tgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaaaagcggcac 958 |||||||||||||||| | |||| |||||||| |||| |||||||||||||| ||||| | Sbjct: 113281 tgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaaaggcggcgc 113340 Query: 959 aggaggt 965 ||||||| Sbjct: 113341 aggaggt 113347 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 489 ttgggattggttagcacttgataccatccaacaagcatgtg 529 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 110553 ttgggattggttagctcttgataccatccaacaagcatgtg 110593 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 140 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 192 |||||||||||||| ||||||| || ||||||||||| |||||||||| |||| Sbjct: 107204 cgatgaagctcgtctaccgcaacctggcccgcaacggccccggctccgtcaag 107256 Score = 61.9 bits (31), Expect = 6e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 191 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 233 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 107429 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 107471 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1134 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1193 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 114300 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 114359 Query: 1194 ctc 1196 ||| Sbjct: 114360 ctc 114362 Score = 48.1 bits (24), Expect = 0.096 Identities = 57/68 (83%) Strand = Plus / Plus Query: 604 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 663 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 111815 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 111874 Query: 664 attgctgg 671 |||||||| Sbjct: 111875 attgctgg 111882 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 685 ctcaagaagttctttgagcatgttttacaag 715 ||||||||||||||||| |||||||| |||| Sbjct: 111974 ctcaagaagttctttgaacatgttttgcaag 112004 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 298 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 347 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 108225 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 108274
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 131 bits (66), Expect = 8e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 782 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 841 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 135342 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 135401 Query: 842 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaag 891 ||||||| ||| |||||| |||||||||||||||||||||| |||||| Sbjct: 135402 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaag 135451 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 350 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 409 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 131742 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatataactg 131801 Query: 410 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 466 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 131802 agaacgatcatgtgaagattggacagtttcatactgtggagcttgagctgaagagac 131858 Score = 105 bits (53), Expect = 5e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 1207 ttggcgcagttgacaggaatagcagctatacttcgattccccctgccagatttggaggac 1266 |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| Sbjct: 137468 ttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccagatttagaggac 137527 Query: 1267 atcgagatgtgat 1279 || |||||||||| Sbjct: 137528 attgagatgtgat 137540 Score = 101 bits (51), Expect = 7e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 710 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 769 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 134989 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 135048 Query: 770 caggttttactaagg 784 ||||||||||||||| Sbjct: 135049 caggttttactaagg 135063 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 535 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 594 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 134455 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 134514 Query: 595 attgggagaag 605 ||||| ||||| Sbjct: 134515 attggtagaag 134525 Score = 81.8 bits (41), Expect = 7e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 1006 tcagcccgagcgtgttatggacctaagcatgttgaggtcgcacatgagcgccttgcaata 1065 ||||| ||||| |||||||||||||||||||||||| | ||| |||| || ||||| || Sbjct: 136860 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 136919 Query: 1066 caaactcttctgatgacagatactttgtttcgg 1098 ||||||||| | || ||||||| |||||||||| Sbjct: 136920 caaactcttttaataacagataatttgtttcgg 136952 Score = 77.8 bits (39), Expect = 1e-10 Identities = 60/67 (89%) Strand = Plus / Plus Query: 899 tgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaaaagcggcac 958 |||||||||||||||| | |||| |||||||| |||| |||||||||||||| ||||| | Sbjct: 136188 tgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaaaggcggcgc 136247 Query: 959 aggaggt 965 ||||||| Sbjct: 136248 aggaggt 136254 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 140 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 192 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 130163 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 130215 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 489 ttgggattggttagcacttgataccatccaacaagcatgtg 529 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133460 ttgggattggttagctcttgataccatccaacaagcatgtg 133500 Score = 61.9 bits (31), Expect = 6e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 191 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 233 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 130378 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 130420 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1134 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1193 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 137206 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 137265 Query: 1194 ctc 1196 ||| Sbjct: 137266 ctc 137268 Score = 48.1 bits (24), Expect = 0.096 Identities = 57/68 (83%) Strand = Plus / Plus Query: 604 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 663 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 134723 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 134782 Query: 664 attgctgg 671 |||||||| Sbjct: 134783 attgctgg 134790 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 685 ctcaagaagttctttgagcatgttttacaag 715 ||||||||||||||||| |||||||| |||| Sbjct: 134882 ctcaagaagttctttgaacatgttttgcaag 134912 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 298 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 347 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 131132 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 131181
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 131 bits (66), Expect = 8e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 782 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 841 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 33704164 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 33704223 Query: 842 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaag 891 ||||||| ||| |||||| |||||||||||||||||||||| |||||| Sbjct: 33704224 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaag 33704273 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 350 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 409 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 33700564 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatataactg 33700623 Query: 410 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 466 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 33700624 agaacgatcatgtgaagattggacagtttcatactgtggagcttgagctgaagagac 33700680 Score = 105 bits (53), Expect = 5e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 1207 ttggcgcagttgacaggaatagcagctatacttcgattccccctgccagatttggaggac 1266 |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| Sbjct: 33706290 ttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccagatttagaggac 33706349 Query: 1267 atcgagatgtgat 1279 || |||||||||| Sbjct: 33706350 attgagatgtgat 33706362 Score = 101 bits (51), Expect = 7e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 710 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 769 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 33703811 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 33703870 Query: 770 caggttttactaagg 784 ||||||||||||||| Sbjct: 33703871 caggttttactaagg 33703885 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 535 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 594 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 33703277 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 33703336 Query: 595 attgggagaag 605 ||||| ||||| Sbjct: 33703337 attggtagaag 33703347 Score = 81.8 bits (41), Expect = 7e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 1006 tcagcccgagcgtgttatggacctaagcatgttgaggtcgcacatgagcgccttgcaata 1065 ||||| ||||| |||||||||||||||||||||||| | ||| |||| || ||||| || Sbjct: 33705682 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 33705741 Query: 1066 caaactcttctgatgacagatactttgtttcgg 1098 ||||||||| | || ||||||| |||||||||| Sbjct: 33705742 caaactcttttaataacagataatttgtttcgg 33705774 Score = 77.8 bits (39), Expect = 1e-10 Identities = 60/67 (89%) Strand = Plus / Plus Query: 899 tgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaaaagcggcac 958 |||||||||||||||| | |||| |||||||| |||| |||||||||||||| ||||| | Sbjct: 33705010 tgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaaaggcggcgc 33705069 Query: 959 aggaggt 965 ||||||| Sbjct: 33705070 aggaggt 33705076 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 140 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 192 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 33698985 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 33699037 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 489 ttgggattggttagcacttgataccatccaacaagcatgtg 529 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 33702282 ttgggattggttagctcttgataccatccaacaagcatgtg 33702322 Score = 61.9 bits (31), Expect = 6e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 191 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 233 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 33699200 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 33699242 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1134 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1193 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 33706028 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 33706087 Query: 1194 ctc 1196 ||| Sbjct: 33706088 ctc 33706090 Score = 48.1 bits (24), Expect = 0.096 Identities = 57/68 (83%) Strand = Plus / Plus Query: 604 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 663 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 33703545 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 33703604 Query: 664 attgctgg 671 |||||||| Sbjct: 33703605 attgctgg 33703612 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 685 ctcaagaagttctttgagcatgttttacaag 715 ||||||||||||||||| |||||||| |||| Sbjct: 33703704 ctcaagaagttctttgaacatgttttgcaag 33703734 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 298 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 347 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 33699954 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 33700003
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 131 bits (66), Expect = 8e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 782 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 841 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 135224 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 135283 Query: 842 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaag 891 ||||||| ||| |||||| |||||||||||||||||||||| |||||| Sbjct: 135284 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaag 135333 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 350 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 409 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 131624 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatataactg 131683 Query: 410 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 466 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 131684 agaacgatcatgtgaagattggacagtttcatactgtggagcttgagctgaagagac 131740 Score = 105 bits (53), Expect = 5e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 1207 ttggcgcagttgacaggaatagcagctatacttcgattccccctgccagatttggaggac 1266 |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| Sbjct: 137350 ttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccagatttagaggac 137409 Query: 1267 atcgagatgtgat 1279 || |||||||||| Sbjct: 137410 attgagatgtgat 137422 Score = 101 bits (51), Expect = 7e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 710 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 769 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 134871 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 134930 Query: 770 caggttttactaagg 784 ||||||||||||||| Sbjct: 134931 caggttttactaagg 134945 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 535 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 594 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 134337 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 134396 Query: 595 attgggagaag 605 ||||| ||||| Sbjct: 134397 attggtagaag 134407 Score = 81.8 bits (41), Expect = 7e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 1006 tcagcccgagcgtgttatggacctaagcatgttgaggtcgcacatgagcgccttgcaata 1065 ||||| ||||| |||||||||||||||||||||||| | ||| |||| || ||||| || Sbjct: 136742 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 136801 Query: 1066 caaactcttctgatgacagatactttgtttcgg 1098 ||||||||| | || ||||||| |||||||||| Sbjct: 136802 caaactcttttaataacagataatttgtttcgg 136834 Score = 77.8 bits (39), Expect = 1e-10 Identities = 60/67 (89%) Strand = Plus / Plus Query: 899 tgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaaaagcggcac 958 |||||||||||||||| | |||| |||||||| |||| |||||||||||||| ||||| | Sbjct: 136070 tgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaaaggcggcgc 136129 Query: 959 aggaggt 965 ||||||| Sbjct: 136130 aggaggt 136136 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 140 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 192 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 130045 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 130097 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 489 ttgggattggttagcacttgataccatccaacaagcatgtg 529 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133342 ttgggattggttagctcttgataccatccaacaagcatgtg 133382 Score = 61.9 bits (31), Expect = 6e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 191 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 233 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 130260 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 130302 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1134 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1193 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 137088 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 137147 Query: 1194 ctc 1196 ||| Sbjct: 137148 ctc 137150 Score = 48.1 bits (24), Expect = 0.096 Identities = 57/68 (83%) Strand = Plus / Plus Query: 604 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 663 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 134605 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 134664 Query: 664 attgctgg 671 |||||||| Sbjct: 134665 attgctgg 134672 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 685 ctcaagaagttctttgagcatgttttacaag 715 ||||||||||||||||| |||||||| |||| Sbjct: 134764 ctcaagaagttctttgaacatgttttgcaag 134794 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 298 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 347 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 131014 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 131063
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 131 bits (66), Expect = 8e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 782 aggatcagtttcgtgattacatgcatcttgaagctgcacggcgagacttgagagtaataa 841 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct: 54607 aggatcagttccgcgattatatgcatcttgaagctgcacggcgagacttaagattaataa 54666 Query: 842 ttgagaataaatcacgcattattcttgcacatgcaccttcaggctacaag 891 ||||||| ||| |||||| |||||||||||||||||||||| |||||| Sbjct: 54667 ttgagaacaaacagcgcattgttcttgcacatgcaccttcaggttacaag 54716 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 350 agtctgtagattatgacaaggaggggaatgttttgcgagtgcgtggcaaaaatattactg 409 |||||||||||||||| |||||||| ||| ||||| || ||||| |||||||| |||| Sbjct: 51007 agtctgtagattatgataaggagggatctgtcttgcgtgtacgtggaaaaaatataactg 51066 Query: 410 agaatgatcacgtgaagattggccagtttcatactttagaacttgagctgaagagac 466 |||| ||||| ||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 51067 agaacgatcatgtgaagattggacagtttcatactgtggagcttgagctgaagagac 51123 Score = 105 bits (53), Expect = 5e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 1207 ttggcgcagttgacaggaatagcagctatacttcgattccccctgccagatttggaggac 1266 |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||| Sbjct: 56733 ttggcgcagttgacaggaatcgcagctatacttcgatttcccttgccagatttagaggac 56792 Query: 1267 atcgagatgtgat 1279 || |||||||||| Sbjct: 56793 attgagatgtgat 56805 Score = 101 bits (51), Expect = 7e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 710 tacaagctttgctgaagcacattgatttcgaagtggtccaatgtgttgtaattgcaagcc 769 |||| ||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||| Sbjct: 54254 tacaggctttcctgaagcatattgattttgaagtagtccaatgtgctgtaattgcaagcc 54313 Query: 770 caggttttactaagg 784 ||||||||||||||| Sbjct: 54314 caggttttactaagg 54328 Score = 93.7 bits (47), Expect = 2e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 535 actgcaagtgctgatctagcagttattcttatgcaagaaggacttgcccacttattcctt 594 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 53720 actgcaagtgctgatctagcagttattctcatgcaagaaggacttgcacatttgttcctc 53779 Query: 595 attgggagaag 605 ||||| ||||| Sbjct: 53780 attggtagaag 53790 Score = 81.8 bits (41), Expect = 7e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 1006 tcagcccgagcgtgttatggacctaagcatgttgaggtcgcacatgagcgccttgcaata 1065 ||||| ||||| |||||||||||||||||||||||| | ||| |||| || ||||| || Sbjct: 56125 tcagctcgagcttgttatggacctaagcatgttgagattgcaaatgaacgtcttgctatc 56184 Query: 1066 caaactcttctgatgacagatactttgtttcgg 1098 ||||||||| | || ||||||| |||||||||| Sbjct: 56185 caaactcttttaataacagataatttgtttcgg 56217 Score = 77.8 bits (39), Expect = 1e-10 Identities = 60/67 (89%) Strand = Plus / Plus Query: 899 tgaaggaagttttggacaccccaggtgtgatgtcactgataaaagatacaaaagcggcac 958 |||||||||||||||| | |||| |||||||| |||| |||||||||||||| ||||| | Sbjct: 55453 tgaaggaagttttggatagcccaagtgtgatgacactaataaaagatacaaaggcggcgc 55512 Query: 959 aggaggt 965 ||||||| Sbjct: 55513 aggaggt 55519 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 140 cgatgaagctcgtccaccgcaatctcgcccgcaacgggcccggctccgccaag 192 |||||||||||||| ||||||| |||||||||||||| |||||||||| |||| Sbjct: 49428 cgatgaagctcgtctaccgcaacctcgcccgcaacggccccggctccgtcaag 49480 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Plus Query: 489 ttgggattggttagcacttgataccatccaacaagcatgtg 529 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 52725 ttgggattggttagctcttgataccatccaacaagcatgtg 52765 Score = 61.9 bits (31), Expect = 6e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 191 agctgctgccggaggaggaggacgacctgtggcacgcgtacaa 233 ||||| |||||||||||||||||||||||||||| || ||||| Sbjct: 49643 agctggtgccggaggaggaggacgacctgtggcatgcctacaa 49685 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Plus Query: 1134 cttggttgagtcagtcaagaaatatggtggtacagtgcacatattttcttcgatgcatgt 1193 ||||||||| || || || |||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 56471 cttggttgaatcggtaaaaaaattcggtggcacagtgcacatcttttcttcaatgcatgt 56530 Query: 1194 ctc 1196 ||| Sbjct: 56531 ctc 56533 Score = 48.1 bits (24), Expect = 0.096 Identities = 57/68 (83%) Strand = Plus / Plus Query: 604 agcataacagcaacaaggtcacgcattgaaacatcgatccctaggaaacatggacctgcc 663 |||||||||| ||| || |||| ||||||||||| || ||| |||| ||||| ||||| Sbjct: 53988 agcataacagtaaccagagcacgtattgaaacatctattcctcggaagcatggccctgcg 54047 Query: 664 attgctgg 671 |||||||| Sbjct: 54048 attgctgg 54055 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 685 ctcaagaagttctttgagcatgttttacaag 715 ||||||||||||||||| |||||||| |||| Sbjct: 54147 ctcaagaagttctttgaacatgttttgcaag 54177 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 298 tctggtgggcgtgatgcggagcgcgtgaagctcaagttggaaattgtagt 347 ||||| || |||||||| ||||| |||| | | ||||||||||||||||| Sbjct: 50397 tctggaggacgtgatgctgagcgtgtgaggttaaagttggaaattgtagt 50446
>ref|NM_118901.4| Arabidopsis thaliana PEL1 (PELOTA); translation release factor (PEL1) mRNA, complete cds Length = 1509 Score = 60.0 bits (30), Expect = 3e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 631 gaaacatcgatccctaggaaacatggacctgccattgctggctacgaatcggctctcaag 690 |||||||| || |||||||| ||||||||||| |||||||| ||||| || ||| | ||| Sbjct: 700 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 759 Query: 691 aagttctttgagcatgtt 708 || || |||||| ||||| Sbjct: 760 aaattttttgagaatgtt 777 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 378 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 437 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 447 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 506 Query: 438 tcatactttagaacttgagctgaagagaccttttgt 473 |||||||| |||||||||||||| |||||||||| Sbjct: 507 ccatactttggaacttgagctgaaacgaccttttgt 542 Score = 48.1 bits (24), Expect = 0.096 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1174 atattttcttcgatgcatgtctccggcgaccaattggcgcagttgacaggaatagcagct 1233 |||||||| |||||||||| || || || |||||||| ||| |||| |||||||||||| Sbjct: 1243 atattttcggcgatgcatgtgtcaggagaacaattggcacagctgactggaatagcagct 1302 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 536 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 578 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 605 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 647
>gb|AY096569.1| Arabidopsis thaliana putative pelota protein (PEL1) (At4g27650) mRNA, complete cds Length = 1168 Score = 60.0 bits (30), Expect = 3e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 631 gaaacatcgatccctaggaaacatggacctgccattgctggctacgaatcggctctcaag 690 |||||||| || |||||||| ||||||||||| |||||||| ||||| || ||| | ||| Sbjct: 490 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 549 Query: 691 aagttctttgagcatgtt 708 || || |||||| ||||| Sbjct: 550 aaattttttgagaatgtt 567 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 378 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 437 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 237 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 296 Query: 438 tcatactttagaacttgagctgaagagaccttttgt 473 |||||||| |||||||||||||| |||||||||| Sbjct: 297 ccatactttggaacttgagctgaaacgaccttttgt 332 Score = 48.1 bits (24), Expect = 0.096 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1174 atattttcttcgatgcatgtctccggcgaccaattggcgcagttgacaggaatagcagct 1233 |||||||| |||||||||| || || || |||||||| ||| |||| |||||||||||| Sbjct: 1033 atattttcggcgatgcatgtgtcaggagaacaattggcacagctgactggaatagcagct 1092 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 536 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 578 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 395 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 437
>gb|AY074298.1| Arabidopsis thaliana putative pelota (PEL1) protein (At4g27650) mRNA, complete cds Length = 1494 Score = 60.0 bits (30), Expect = 3e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 631 gaaacatcgatccctaggaaacatggacctgccattgctggctacgaatcggctctcaag 690 |||||||| || |||||||| ||||||||||| |||||||| ||||| || ||| | ||| Sbjct: 670 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 729 Query: 691 aagttctttgagcatgtt 708 || || |||||| ||||| Sbjct: 730 aaattttttgagaatgtt 747 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 378 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 437 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 417 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 476 Query: 438 tcatactttagaacttgagctgaagagaccttttgt 473 |||||||| |||||||||||||| |||||||||| Sbjct: 477 ccatactttggaacttgagctgaaacgaccttttgt 512 Score = 48.1 bits (24), Expect = 0.096 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1174 atattttcttcgatgcatgtctccggcgaccaattggcgcagttgacaggaatagcagct 1233 |||||||| |||||||||| || || || |||||||| ||| |||| |||||||||||| Sbjct: 1213 atattttcggcgatgcatgtgtcaggagaacaattggcacagctgactggaatagcagct 1272 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 536 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 578 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 575 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 617
>gb|AF325048.2|AF325048 Arabidopsis thaliana AT4g27650 (AT4g27650/T29A15_140) mRNA, complete cds Length = 1436 Score = 60.0 bits (30), Expect = 3e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 631 gaaacatcgatccctaggaaacatggacctgccattgctggctacgaatcggctctcaag 690 |||||||| || |||||||| ||||||||||| |||||||| ||||| || ||| | ||| Sbjct: 540 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 599 Query: 691 aagttctttgagcatgtt 708 || || |||||| ||||| Sbjct: 600 aaattttttgagaatgtt 617 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 378 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 437 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 287 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 346 Query: 438 tcatactttagaacttgagctgaagagaccttttgt 473 |||||||| |||||||||||||| |||||||||| Sbjct: 347 ccatactttggaacttgagctgaaacgaccttttgt 382 Score = 48.1 bits (24), Expect = 0.096 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1174 atattttcttcgatgcatgtctccggcgaccaattggcgcagttgacaggaatagcagct 1233 |||||||| |||||||||| || || || |||||||| ||| |||| |||||||||||| Sbjct: 1214 atattttcggcgatgcatgtgtcaggagaacaattggcacagctgactggaatagcagct 1273 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 536 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 578 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 445 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 487
>emb|BX827139.1|CNS0A3ML Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1428 Score = 60.0 bits (30), Expect = 3e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 631 gaaacatcgatccctaggaaacatggacctgccattgctggctacgaatcggctctcaag 690 |||||||| || |||||||| ||||||||||| |||||||| ||||| || ||| | ||| Sbjct: 700 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 759 Query: 691 aagttctttgagcatgtt 708 || || |||||| ||||| Sbjct: 760 aaattttttgagaatgtt 777 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 378 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 437 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 447 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 506 Query: 438 tcatactttagaacttgagctgaagagaccttttgt 473 |||||||| |||||||||||||| |||||||||| Sbjct: 507 ccatactttggaacttgagctgaaacgaccttttgt 542 Score = 48.1 bits (24), Expect = 0.096 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1174 atattttcttcgatgcatgtctccggcgaccaattggcgcagttgacaggaatagcagct 1233 |||||||| |||||||||| || || || |||||||| ||| |||| |||||||||||| Sbjct: 1243 atattttcggcgatgcatgtgtcaggagaacaattggcacagctgactggaatagcagct 1302 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 536 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 578 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 605 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 647
>gb|AF069497.1|AF069497 Arabidopsis thaliana pelota (PEL1) mRNA, complete cds Length = 1498 Score = 60.0 bits (30), Expect = 3e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 631 gaaacatcgatccctaggaaacatggacctgccattgctggctacgaatcggctctcaag 690 |||||||| || |||||||| ||||||||||| |||||||| ||||| || ||| | ||| Sbjct: 691 gaaacatccattcctaggaagcatggacctgcaattgctggttacgagtctgctttgaag 750 Query: 691 aagttctttgagcatgtt 708 || || |||||| ||||| Sbjct: 751 aaattttttgagaatgtt 768 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 378 tgttttgcgagtgcgtggcaaaaatattactgagaatgatcacgtgaagattggccagtt 437 ||||||||| | |||||||||||||| |||||||| ||||| |||||||| || Sbjct: 438 tgttttgcgcatacgtggcaaaaatatcctggagaatgagcacgtaaagattggtgcatt 497 Query: 438 tcatactttagaacttgagctgaagagaccttttgt 473 |||||||| |||||||||||||| |||||||||| Sbjct: 498 ccatactttggaacttgagctgaaacgaccttttgt 533 Score = 48.1 bits (24), Expect = 0.096 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1174 atattttcttcgatgcatgtctccggcgaccaattggcgcagttgacaggaatagcagct 1233 |||||||| |||||||||| || || || |||||||| ||| |||| |||||||||||| Sbjct: 1234 atattttcggcgatgcatgtgtcaggagaacaattggcacagctgactggaatagcagct 1293 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 536 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 578 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 596 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 638
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67 Length = 200001 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 631 gaaacatcgatccctaggaaacatggacctgccattgctggctacga 677 |||||||| || |||||||| ||||||||||| |||||||| ||||| Sbjct: 115806 gaaacatccattcctaggaagcatggacctgcaattgctggttacga 115760 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Minus Query: 536 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 578 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 116077 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 116035 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Minus Query: 439 catactttagaacttgagctgaagagaccttttgt 473 |||||||| |||||||||||||| |||||||||| Sbjct: 117116 catactttggaacttgagctgaaacgaccttttgt 117082
>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project) Length = 95679 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 631 gaaacatcgatccctaggaaacatggacctgccattgctggctacga 677 |||||||| || |||||||| ||||||||||| |||||||| ||||| Sbjct: 55096 gaaacatccattcctaggaagcatggacctgcaattgctggttacga 55050 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Minus Query: 536 ctgcaagtgctgatctagcagttattcttatgcaagaaggact 578 |||| |||||||||||||| || |||| |||||||||||||| Sbjct: 55367 ctgctagtgctgatctagctgtagttctaatgcaagaaggact 55325 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Minus Query: 439 catactttagaacttgagctgaagagaccttttgt 473 |||||||| |||||||||||||| |||||||||| Sbjct: 56406 catactttggaacttgagctgaaacgaccttttgt 56372
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 192 gctgctgccggaggaggaggacg 214 ||||||||||||||||||||||| Sbjct: 4378766 gctgctgccggaggaggaggacg 4378788 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 agctgctgccggaggaggagg 211 ||||||||||||||||||||| Sbjct: 3811464 agctgctgccggaggaggagg 3811444
>ref|XM_962033.1| PREDICTED: Tribolium castaneum similar to Protein pelota (LOC655490), mRNA Length = 1152 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 218 tgtggcacgcgtacaatctcat 239 |||||||||||||||||||||| Sbjct: 77 tgtggcacgcgtacaatctcat 98
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 tctcctctcctccactcgccgccgtc 75 ||||||||||||| |||||||||||| Sbjct: 53982 tctcctctcctcccctcgccgccgtc 53957
>gb|AC126403.7| Mus musculus chromosome 15, clone RP24-483E7, complete sequence Length = 152384 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1071 tcttctgatgacagatactttg 1092 |||||||||||||||||||||| Sbjct: 91549 tcttctgatgacagatactttg 91570
>gb|AC118216.15| Mus musculus chromosome 1, clone RP23-209N14, complete sequence Length = 269784 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 45 tcccctctcctctcctccactc 66 |||||||||||||||||||||| Sbjct: 229126 tcccctctcctctcctccactc 229105
>gb|AC161111.2| Mus musculus chromosome 15, clone RP23-50B6, complete sequence Length = 200074 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1071 tcttctgatgacagatactttg 1092 |||||||||||||||||||||| Sbjct: 32003 tcttctgatgacagatactttg 32024
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 195 gctgccggaggaggaggacgac 216 |||||||||||||||||||||| Sbjct: 10736876 gctgccggaggaggaggacgac 10736897
>gb|AC007717.8|AC007717 Homo sapiens chromosome 18, clone RP11-315O17, complete sequence Length = 168787 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1128 tgtgaacttggttgagtcagtc 1149 |||||||||||||||||||||| Sbjct: 136477 tgtgaacttggttgagtcagtc 136498
>emb|AL358292.4|CNS05TDZ Human chromosome 14 DNA sequence BAC R-736P16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180211 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1128 tgtgaacttggttgagtcagtc 1149 |||||||||||||||||||||| Sbjct: 54907 tgtgaacttggttgagtcagtc 54928
>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135105 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 195 gctgccggaggaggaggacgac 216 |||||||||||||||||||||| Sbjct: 101772 gctgccggaggaggaggacgac 101793
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 195 gctgccggaggaggaggacgac 216 |||||||||||||||||||||| Sbjct: 3225 gctgccggaggaggaggacgac 3246
>emb|BX936352.19| Zebrafish DNA sequence from clone DKEY-37I13 in linkage group 6, complete sequence Length = 161193 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 gtgaagctcaagttggaaatt 342 ||||||||||||||||||||| Sbjct: 121807 gtgaagctcaagttggaaatt 121787
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 agctgctgccggaggaggagg 211 ||||||||||||||||||||| Sbjct: 1823351 agctgctgccggaggaggagg 1823371
>emb|CR847870.16| Zebrafish DNA sequence from clone DKEY-170G11 in linkage group 22, complete sequence Length = 237985 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1136 tggttgagtcagtcaagaaat 1156 ||||||||||||||||||||| Sbjct: 116507 tggttgagtcagtcaagaaat 116487
>ref|NM_001036447.1| Arabidopsis thaliana unknown protein (AT2G41350) mRNA, complete cds Length = 1115 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agaacttgagctgaagagacc 467 ||||||||||||||||||||| Sbjct: 556 agaacttgagctgaagagacc 536
>ref|NM_129698.1| Arabidopsis thaliana unknown protein (AT2G41350) mRNA, complete cds Length = 1217 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agaacttgagctgaagagacc 467 ||||||||||||||||||||| Sbjct: 565 agaacttgagctgaagagacc 545
>gb|BT015461.1| Arabidopsis thaliana At2g41350 mRNA sequence Length = 897 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agaacttgagctgaagagacc 467 ||||||||||||||||||||| Sbjct: 338 agaacttgagctgaagagacc 318
>gb|AY682094.1| Homo sapiens fibroblast growth factor 9 (glia-activating factor) (FGF9) gene, complete cds Length = 33221 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gctgctgccggaggaggagga 212 ||||||||||||||||||||| Sbjct: 5024 gctgctgccggaggaggagga 5004
>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete sequence Length = 208603 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1205 aattggcgcagttgacaggaa 1225 ||||||||||||||||||||| Sbjct: 121923 aattggcgcagttgacaggaa 121903
>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence Length = 195446 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1205 aattggcgcagttgacaggaa 1225 ||||||||||||||||||||| Sbjct: 189060 aattggcgcagttgacaggaa 189040
>ref|XM_848587.1| PREDICTED: Canis familiaris similar to Transcription factor Sp8 (LOC610985), mRNA Length = 1327 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 gctgccggaggaggaggacga 215 ||||||||||||||||||||| Sbjct: 268 gctgccggaggaggaggacga 248
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 ttctcagggattctgcttctg 301 ||||||||||||||||||||| Sbjct: 3531892 ttctcagggattctgcttctg 3531912
>gb|AY143923.1| Arabidopsis thaliana At2g41350/F13H10.10 mRNA, complete cds Length = 897 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agaacttgagctgaagagacc 467 ||||||||||||||||||||| Sbjct: 341 agaacttgagctgaagagacc 321
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1409 ttttcctttgagaagatatctttat 1433 |||| |||||||||||||||||||| Sbjct: 240629 ttttgctttgagaagatatctttat 240605
>gb|AC073493.27| Homo sapiens Xp BAC RP11-631N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211422 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 tcccctctcctctcctccactcgcc 69 |||||||||||||||||| |||||| Sbjct: 10415 tcccctctcctctcctcccctcgcc 10439
>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete sequence Length = 96066 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 agaacttgagctgaagagacc 467 ||||||||||||||||||||| Sbjct: 39790 agaacttgagctgaagagacc 39810
>gb|AY075602.1| Arabidopsis thaliana At2g41350/F13H10.10 mRNA, complete cds Length = 1201 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agaacttgagctgaagagacc 467 ||||||||||||||||||||| Sbjct: 555 agaacttgagctgaagagacc 535
>gb|AF435944.1| Chalinolobus beatrix protamine P1 gene, complete cds Length = 349 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gctgctgccggaggaggagga 212 ||||||||||||||||||||| Sbjct: 128 gctgctgccggaggaggagga 148
>emb|CR695420.2|CNS0FZJC Tetraodon nigroviridis full-length cDNA Length = 1003 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cccctctcctctcctccactc 66 ||||||||||||||||||||| Sbjct: 854 cccctctcctctcctccactc 874
>emb|AL603791.3| Human DNA sequence from clone RP11-44E1 on chromosome 1 Contains part of the KCNH1 gene for a potassium voltage-gated channel, subfamily H (eag-related), member, complete sequence Length = 17716 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1219 acaggaatagcagctatactt 1239 ||||||||||||||||||||| Sbjct: 17556 acaggaatagcagctatactt 17576
>emb|AL158831.15| Human DNA sequence from clone RP11-564A4 on chromosome 9, complete sequence Length = 162700 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1452 ccacatctattggttattttt 1472 ||||||||||||||||||||| Sbjct: 141960 ccacatctattggttattttt 141940
>emb|AL139378.15| Human DNA sequence from clone RP11-271B5 on chromosome 13 Contains the FGF9 gene for fibroblast growth factor 9 (glia-activating factor (GAF, HBFG-9)), a ribosomal protein S7 (40S ribosomal protein S7) (RPS7) pseudogene and two CpG islands, complete sequence Length = 166703 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gctgctgccggaggaggagga 212 ||||||||||||||||||||| Sbjct: 58139 gctgctgccggaggaggagga 58119
>gb|AC092017.2| Homo sapiens chromosome 1 clone RP11-543B16, complete sequence Length = 193041 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1219 acaggaatagcagctatactt 1239 ||||||||||||||||||||| Sbjct: 1840 acaggaatagcagctatactt 1860
>gb|AY084814.1| Arabidopsis thaliana clone 11854 mRNA, complete sequence Length = 1217 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agaacttgagctgaagagacc 467 ||||||||||||||||||||| Sbjct: 565 agaacttgagctgaagagacc 545
>emb|AL935208.8| Zebrafish DNA sequence from clone CH211-241N17, complete sequence Length = 151406 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 gtgaagctcaagttggaaatt 342 ||||||||||||||||||||| Sbjct: 53042 gtgaagctcaagttggaaatt 53022
>emb|BX293544.7| Mouse DNA sequence from clone RP23-109C9 on chromosome 2, complete sequence Length = 97505 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 735 tttcgaagtggtccaatgtgttgta 759 ||||||||||||| ||||||||||| Sbjct: 39569 tttcgaagtggtctaatgtgttgta 39545
>gb|AC147440.4| Gallus gallus BAC clone CH261-49N7 from chromosome unknown, complete sequence Length = 192621 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 ttcctttgagaagatatcttt 1431 ||||||||||||||||||||| Sbjct: 55766 ttcctttgagaagatatcttt 55786
>gb|M29764.1|CHKMHBLIIB Chicken MHC class II B-LBIII-beta gene, exon 1 Length = 444 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gctgctgccggaggaggagga 212 ||||||||||||||||||||| Sbjct: 123 gctgctgccggaggaggagga 103 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 267,495,952 Number of extensions: 14588765 Number of successful extensions: 390717 Number of sequences better than 10.0: 55 Number of HSP's gapped: 390710 Number of HSP's successfully gapped: 165 Length of query: 1561 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1538 Effective length of database: 18,503,978,556 Effective search space: 28459119019128 Effective search space used: 28459119019128 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
