Clone Name | FLbaf96o08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK068155:Os08g0485400 | 369 | e-102 | 2 | AK100705:Os08g0485400 | 236 | 2e-62 | 3 | AK109964: | 46 | 7e-05 | 4 | AK071795:Os07g0693200 | 34 | 0.21 | 5 | AK110223:Os01g0329300 | 33 | 0.61 | 6 | AK070848:Os01g0141900 | 32 | 1.4 | 7 | AK110196:Os05g0516400 | 31 | 2.3 | 8 | Os12g0228300:Os12g0228300 | 30 | 3.0 | 9 | AK109861:Os12g0117500 | 30 | 3.0 | 10 | AK070117:Os06g0572000 | 30 | 3.0 | 11 | AK110283: | 30 | 3.9 | 12 | AY360145:Os05g0148600 | 30 | 5.2 | 13 | AK104336:Os05g0148600 | 30 | 5.2 | 14 | AK066168:Os05g0148600 | 30 | 5.2 | 15 | Os06g0542700:Os06g0542700 | 29 | 6.7 | 16 | AK066544:Os07g0102100 | 29 | 6.7 | 17 | Os09g0365900:Os09g0365900 | 29 | 8.8 | 18 | AK073993:Os03g0618900 | 29 | 8.8 | 19 | AK073691:Os08g0533700 | 29 | 8.8 | 20 | AK073544:Os01g0895300 | 29 | 8.8 | 21 | AK070064:Os01g0939100 | 29 | 8.8 |
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>AK068155:Os08g0485400 | Length = 280 Score = 369 bits (946), Expect(2) = e-102 Identities = 185/270 (68%), Positives = 197/270 (72%) Frame = +1 Query: 130 MGWKGIMGFDYGVVQAPLGPDISGPELXXXXXXXXXIGLLRLPDWPAPDHVRELIRRTRS 309 MGWKGI+GFD+GVVQAPLGPDISGPEL IGLLRLPDWPAPD VR+LIRRTRS Sbjct: 1 MGWKGILGFDHGVVQAPLGPDISGPELAAAVANAGGIGLLRLPDWPAPDRVRDLIRRTRS 60 Query: 310 LTEKPFGAAIVLAFPHXXXXXXXXXXXXXXXXXYWGEFPKERVDEAHRAGVKVLHQVGDL 489 LTE+PFGAAIVLAFPH YWGEFP+ERVDEAH AGVKVLHQVG Sbjct: 61 LTERPFGAAIVLAFPHEENLRVVLEEKLAVLQVYWGEFPRERVDEAHLAGVKVLHQVGSF 120 Query: 490 EEAAKAKEAGVDGIIIQGREAGGHVIGQEGXXXXXXXXXXXXXXXXXXXIAAGGIVDXXX 669 EEAAKAKEAGVDGII+QG EAGGHVIGQEG IAAGGIVD Sbjct: 121 EEAAKAKEAGVDGIIVQGCEAGGHVIGQEGLLPLLPRVVDLVSDTDISVIAAGGIVDGRG 180 Query: 670 XXXXXXXXXXXXXXXTRFVATEESFAHPLYKKKLIEMNCTDYTNVFGRARWPGAPQRVLK 849 TRF+ TEESFAHPLYKK+LIE+NCT YTNVFGRARWPGAPQRVLK Sbjct: 181 YAAALALGAQGVCLGTRFLTTEESFAHPLYKKRLIEINCTGYTNVFGRARWPGAPQRVLK 240 Query: 850 TPFYVEWKNLPDHETEENQPIIGHSIIHGV 939 T FY +WKNLP+ ETEENQPIIGH+IIHGV Sbjct: 241 TTFYDQWKNLPEQETEENQPIIGHTIIHGV 270 Score = 23.5 bits (49), Expect(2) = e-102 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +3 Query: 945 GYTSICWYCS 974 GY+S+ WYCS Sbjct: 271 GYSSVRWYCS 280
>AK100705:Os08g0485400 | Length = 206 Score = 236 bits (603), Expect = 2e-62 Identities = 121/177 (68%), Positives = 127/177 (71%) Frame = +1 Query: 130 MGWKGIMGFDYGVVQAPLGPDISGPELXXXXXXXXXIGLLRLPDWPAPDHVRELIRRTRS 309 MGWKGI+GFD+GVVQAPLGPDISGPEL IGLLRLPDWPAPD VR+LIRRTRS Sbjct: 1 MGWKGILGFDHGVVQAPLGPDISGPELAAAVANAGGIGLLRLPDWPAPDRVRDLIRRTRS 60 Query: 310 LTEKPFGAAIVLAFPHXXXXXXXXXXXXXXXXXYWGEFPKERVDEAHRAGVKVLHQVGDL 489 LTE+PFGAAIVLAFPH YWGEFP+ERVDEAH AGVKVLHQVG Sbjct: 61 LTERPFGAAIVLAFPHEENLRVVLEEKLAVLQVYWGEFPRERVDEAHLAGVKVLHQVGSF 120 Query: 490 EEAAKAKEAGVDGIIIQGREAGGHVIGQEGXXXXXXXXXXXXXXXXXXXIAAGGIVD 660 EEAAKAKEAGVDGII+QG EAGGHVIGQEG IAAGGIVD Sbjct: 121 EEAAKAKEAGVDGIIVQGCEAGGHVIGQEGLLPLLPRVVDLVSDTDISVIAAGGIVD 177
>AK109964: | Length = 589 Score = 45.8 bits (107), Expect = 7e-05 Identities = 50/224 (22%), Positives = 77/224 (34%), Gaps = 15/224 (6%) Frame = +1 Query: 193 ISGPELXXXXXXXXXIGLLRLPDWPAPDHVRELIRRTRSLT--------EKPFGAAIV-- 342 + P L +G L P+P+ +R+ IR T+SL E +G+ V Sbjct: 24 VGTPALAAAVSNAGALGTLTALTQPSPEALRKAIRETKSLISEDIRKEREGKYGSFAVNI 83 Query: 343 -----LAFPHXXXXXXXXXXXXXXXXXYWGEFPKERVDEAHRAGVKVLHQVGDLEEAAKA 507 + P G P E + AG V+H+ + A A Sbjct: 84 TLLPSINPPDYVGYAKAALEEGVRIFETAGNNPGEVIKVVKAAGAYVIHKCTAVRHARSA 143 Query: 508 KEAGVDGIIIQGREAGGHVIGQEGXXXXXXXXXXXXXXXXXXXIAAGGIVDXXXXXXXXX 687 + G D + I G E GH E IA+GGI + Sbjct: 144 ERLGADMLSIDGFECAGH--PGEDDIGGLVLMARAAEELKIPFIASGGIANGQGLASALA 201 Query: 688 XXXXXXXXXTRFVATEESFAHPLYKKKLIEMNCTDYTNVFGRAR 819 TRF+ T+ES H K+ ++E + + T++F R Sbjct: 202 LGAVGANMGTRFMCTKESEIHDNIKRAIVESDERNTTHIFRTLR 245
>AK071795:Os07g0693200 | Length = 402 Score = 34.3 bits (77), Expect = 0.21 Identities = 27/92 (29%), Positives = 39/92 (42%) Frame = -3 Query: 462 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILLVREGQHDGRPERLLGQAPGPPYQLP 283 D VGL L L + HG +++ P+ + G HD R E +AP P + Sbjct: 257 DGHAVGLHHHRLLLLQQARVPHGAVVVEDGPREQVGVRGLHDLRAEGRADRAPVGPDEAR 316 Query: 282 HVIRRRPVGKAEEAYGASVGDGGGELRAGDVG 187 +R +P+G G V G GE+ G G Sbjct: 317 QRLRHQPLGGRHG--GHRVAAGVGEVHEGPSG 346
>AK110223:Os01g0329300 | Length = 759 Score = 32.7 bits (73), Expect = 0.61 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = -1 Query: 653 IPPAAITKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPS-TPASLAFAASSRSPT 477 IPPAA+ K S RP P T PP S P + P+ P + A A + PT Sbjct: 256 IPPAAMPKPP-----SVAPVQPPQRPPAPATKPPPSFPPQLAPTMPPPAHAPAETPAPPT 310 Query: 476 *CKTLTPARWASSTRSLGNSP 414 L PA A S ++ +SP Sbjct: 311 TPPALPPATTAPSPKNSSSSP 331
>AK070848:Os01g0141900 | Length = 606 Score = 31.6 bits (70), Expect = 1.4 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 16/90 (17%) Frame = -1 Query: 635 TKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSR---------- 486 T T S +T + SRPS P P SR STP A S++ Sbjct: 285 TPTSRSSIPATRSSTPSSRPSIPAQSKPVSRS-----STPTRRPSATSTQHGSLAAPVRS 339 Query: 485 ------SPT*CKTLTPARWASSTRSLGNSP 414 +PT K+ +PA+ +ST S G+SP Sbjct: 340 TSISKPAPTMSKSSSPAKTIASTPSRGSSP 369
>AK110196:Os05g0516400 | Length = 827 Score = 30.8 bits (68), Expect = 2.3 Identities = 20/68 (29%), Positives = 30/68 (44%) Frame = -1 Query: 653 IPPAAITKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT* 474 +PPA + + T + + P P T PP+ P +PS P A A +++ P Sbjct: 166 LPPATSPPSPANPLPPATSPPSPANPLPPTTSPPSPAPPPTVPSQPPEAAPAPTTKPPP- 224 Query: 473 CKTLTPAR 450 L PAR Sbjct: 225 -TPLPPAR 231
>Os12g0228300:Os12g0228300 | Length = 1132 Score = 30.4 bits (67), Expect = 3.0 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -3 Query: 303 GPPYQLPHVIRRRPVGKAEEAYGASVGDGGGELRAGDVGAE 181 G P+ L RRRP + G + GDGGGE R G E Sbjct: 22 GIPHALALTARRRPTNRPARPRGEN-GDGGGERRRQRTGVE 61
>AK109861:Os12g0117500 | Length = 173 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +1 Query: 481 GDLEEAAKAKEAGVDGIIIQGREAGGH 561 GD+EEAA+ E G +G +++GRE G H Sbjct: 62 GDMEEAAE--ERGGEGRVVRGREHGNH 86
>AK070117:Os06g0572000 | Length = 85 Score = 30.4 bits (67), Expect = 3.0 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Frame = -1 Query: 578 PS*PITCPPASRP*MIIPS-----TPASLAFAASSRSPT*CKTLTPARWASSTRSLGN 420 PS T PP + ++ PS PASLAF + +P+ C L +++RSLG+ Sbjct: 22 PSDATTLPPPTLADLLHPSHRDAAPPASLAFGSPPPAPSLCDPLAIFDTVAASRSLGS 79
>AK110283: | Length = 501 Score = 30.0 bits (66), Expect = 3.9 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -1 Query: 653 IPPAAITKTVLSETRSTTLG-SNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT 477 +PP+ T + T S + G + P+ PI PP+S P IP+TPA ++ + T Sbjct: 311 LPPSGSTSSPTGSTSSPSGGIPHHVPPNKPIPAPPSS-PLPPIPTTPAPTPTPTATPTAT 369 Query: 476 *CKTLTPA 453 T+ PA Sbjct: 370 PTTTVPPA 377
>AY360145:Os05g0148600 | Length = 544 Score = 29.6 bits (65), Expect = 5.2 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 462 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 358 D + ++DPLLG L G+P Q+N Q+LL Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489
>AK104336:Os05g0148600 | Length = 544 Score = 29.6 bits (65), Expect = 5.2 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 462 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 358 D + ++DPLLG L G+P Q+N Q+LL Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489
>AK066168:Os05g0148600 | Length = 544 Score = 29.6 bits (65), Expect = 5.2 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 462 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 358 D + ++DPLLG L G+P Q+N Q+LL Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489
>Os06g0542700:Os06g0542700 | Length = 284 Score = 29.3 bits (64), Expect = 6.7 Identities = 12/38 (31%), Positives = 23/38 (60%) Frame = -1 Query: 1085 VTSLSTTSLAGTISVISPTPWPAYIAMLWISPVVVALG 972 + SL SL+ +V+SP PW +++ +W+ P ++ G Sbjct: 241 IYSLENNSLS---NVVSPEPWKSWLPPIWMMPNLMKTG 275
>AK066544:Os07g0102100 | Length = 808 Score = 29.3 bits (64), Expect = 6.7 Identities = 26/95 (27%), Positives = 40/95 (42%) Frame = -1 Query: 761 LYSGCAKLSSVATNLVPKQTXXXXXXXXXXXXXPSTIPPAAITKTVLSETRSTTLGSNGS 582 ++ A SS AT+ P T ++ + + T S + S+ S + Sbjct: 14 VWPSSASASSTATSAPPHSTSTPPPSTAASATPTTSSASSPSSSTASSSSPSS---STST 70 Query: 581 RPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT 477 PS P T A+ + PSTP+S A S+ SPT Sbjct: 71 SPSAPTTTETAA----LSPSTPSSPATPRSASSPT 101
>Os09g0365900:Os09g0365900 | Length = 577 Score = 28.9 bits (63), Expect = 8.8 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +2 Query: 80 PPPAAGRTALTIRLGRKWGGRASWASTTAS 169 PPP + RT L + K GG+ WA S Sbjct: 368 PPPTSDRTILLLNTQNKIGGQIKWALNNVS 397
>AK073993:Os03g0618900 | Length = 271 Score = 28.9 bits (63), Expect = 8.8 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 1028 PWPAYIAMLWISPVVVALGTVPANRRISLCTPWMIEWPII 909 P P +A W+S + L RR +C PWMIE+ ++ Sbjct: 210 PEPLLLATDWLSRLHFFLNP----RRSMICKPWMIEYSLV 245
>AK073691:Os08g0533700 | Length = 238 Score = 28.9 bits (63), Expect = 8.8 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = -3 Query: 315 GQAPGPPYQLPHVIRRRPVGKAEEAYGASVGDGGGELRAGDVGAERCLHDAVVEAH 148 G+ PG P L +RRRP+ + VG + D+GA L DA +AH Sbjct: 94 GEKPGSPISLSSGLRRRPIAHTD------VGPSSHARKDRDIGAPIKL-DAEAQAH 142
>AK073544:Os01g0895300 | Length = 376 Score = 28.9 bits (63), Expect = 8.8 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 8/77 (10%) Frame = -3 Query: 384 LQHNPQILLVREGQHDGRPERLLGQAPGPPYQLPHVIRR-------RPV-GKAEEAYGAS 229 L+ ++ + R H G P R QA + PH++RR RP+ + E + Sbjct: 14 LEPRGEVSVERLVLHSGEPRRRRQQAHPLRHLQPHLLRRMELRELHRPLYEQREHVELRA 73 Query: 228 VGDGGGELRAGDVGAER 178 VG G G +R G V A R Sbjct: 74 VGAGQGRVRGGGVLAGR 90
>AK070064:Os01g0939100 | Length = 1043 Score = 28.9 bits (63), Expect = 8.8 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = +1 Query: 427 KERVDEAHRAGVKVLHQVGDLEEAAK--AKEAGV---DGIIIQGRE 549 +E V H AG+ V GD AK A+E G+ DGI I+G E Sbjct: 669 REAVATCHAAGINVRMVTGDNINTAKAIARECGILTDDGIAIEGPE 714 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,475,469 Number of extensions: 873345 Number of successful extensions: 3239 Number of sequences better than 10.0: 21 Number of HSP's gapped: 3230 Number of HSP's successfully gapped: 22 Length of query: 451 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 347 Effective length of database: 11,235,591 Effective search space: 3898750077 Effective search space used: 3898750077 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)