ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96o08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068155:Os08g0485400 369 e-102
2AK100705:Os08g0485400 236 2e-62
3AK109964: 46 7e-05
4AK071795:Os07g0693200 34 0.21
5AK110223:Os01g0329300 33 0.61
6AK070848:Os01g0141900 32 1.4
7AK110196:Os05g0516400 31 2.3
8Os12g0228300:Os12g0228300 30 3.0
9AK109861:Os12g0117500 30 3.0
10AK070117:Os06g0572000 30 3.0
11AK110283: 30 3.9
12AY360145:Os05g0148600 30 5.2
13AK104336:Os05g0148600 30 5.2
14AK066168:Os05g0148600 30 5.2
15Os06g0542700:Os06g0542700 29 6.7
16AK066544:Os07g0102100 29 6.7
17Os09g0365900:Os09g0365900 29 8.8
18AK073993:Os03g0618900 29 8.8
19AK073691:Os08g0533700 29 8.8
20AK073544:Os01g0895300 29 8.8
21AK070064:Os01g0939100 29 8.8

>AK068155:Os08g0485400 |
          Length = 280
 Score =  369 bits (946), Expect(2) = e-102
 Identities = 185/270 (68%), Positives = 197/270 (72%)
 Frame = +1

Query: 130 MGWKGIMGFDYGVVQAPLGPDISGPELXXXXXXXXXIGLLRLPDWPAPDHVRELIRRTRS 309
           MGWKGI+GFD+GVVQAPLGPDISGPEL         IGLLRLPDWPAPD VR+LIRRTRS
Sbjct: 1   MGWKGILGFDHGVVQAPLGPDISGPELAAAVANAGGIGLLRLPDWPAPDRVRDLIRRTRS 60

Query: 310 LTEKPFGAAIVLAFPHXXXXXXXXXXXXXXXXXYWGEFPKERVDEAHRAGVKVLHQVGDL 489
           LTE+PFGAAIVLAFPH                 YWGEFP+ERVDEAH AGVKVLHQVG  
Sbjct: 61  LTERPFGAAIVLAFPHEENLRVVLEEKLAVLQVYWGEFPRERVDEAHLAGVKVLHQVGSF 120

Query: 490 EEAAKAKEAGVDGIIIQGREAGGHVIGQEGXXXXXXXXXXXXXXXXXXXIAAGGIVDXXX 669
           EEAAKAKEAGVDGII+QG EAGGHVIGQEG                   IAAGGIVD   
Sbjct: 121 EEAAKAKEAGVDGIIVQGCEAGGHVIGQEGLLPLLPRVVDLVSDTDISVIAAGGIVDGRG 180

Query: 670 XXXXXXXXXXXXXXXTRFVATEESFAHPLYKKKLIEMNCTDYTNVFGRARWPGAPQRVLK 849
                          TRF+ TEESFAHPLYKK+LIE+NCT YTNVFGRARWPGAPQRVLK
Sbjct: 181 YAAALALGAQGVCLGTRFLTTEESFAHPLYKKRLIEINCTGYTNVFGRARWPGAPQRVLK 240

Query: 850 TPFYVEWKNLPDHETEENQPIIGHSIIHGV 939
           T FY +WKNLP+ ETEENQPIIGH+IIHGV
Sbjct: 241 TTFYDQWKNLPEQETEENQPIIGHTIIHGV 270



 Score = 23.5 bits (49), Expect(2) = e-102
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 945 GYTSICWYCS 974
           GY+S+ WYCS
Sbjct: 271 GYSSVRWYCS 280



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>AK100705:Os08g0485400 |
          Length = 206

 Score =  236 bits (603), Expect = 2e-62
 Identities = 121/177 (68%), Positives = 127/177 (71%)
 Frame = +1

Query: 130 MGWKGIMGFDYGVVQAPLGPDISGPELXXXXXXXXXIGLLRLPDWPAPDHVRELIRRTRS 309
           MGWKGI+GFD+GVVQAPLGPDISGPEL         IGLLRLPDWPAPD VR+LIRRTRS
Sbjct: 1   MGWKGILGFDHGVVQAPLGPDISGPELAAAVANAGGIGLLRLPDWPAPDRVRDLIRRTRS 60

Query: 310 LTEKPFGAAIVLAFPHXXXXXXXXXXXXXXXXXYWGEFPKERVDEAHRAGVKVLHQVGDL 489
           LTE+PFGAAIVLAFPH                 YWGEFP+ERVDEAH AGVKVLHQVG  
Sbjct: 61  LTERPFGAAIVLAFPHEENLRVVLEEKLAVLQVYWGEFPRERVDEAHLAGVKVLHQVGSF 120

Query: 490 EEAAKAKEAGVDGIIIQGREAGGHVIGQEGXXXXXXXXXXXXXXXXXXXIAAGGIVD 660
           EEAAKAKEAGVDGII+QG EAGGHVIGQEG                   IAAGGIVD
Sbjct: 121 EEAAKAKEAGVDGIIVQGCEAGGHVIGQEGLLPLLPRVVDLVSDTDISVIAAGGIVD 177



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>AK109964: |
          Length = 589

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 50/224 (22%), Positives = 77/224 (34%), Gaps = 15/224 (6%)
 Frame = +1

Query: 193 ISGPELXXXXXXXXXIGLLRLPDWPAPDHVRELIRRTRSLT--------EKPFGAAIV-- 342
           +  P L         +G L     P+P+ +R+ IR T+SL         E  +G+  V  
Sbjct: 24  VGTPALAAAVSNAGALGTLTALTQPSPEALRKAIRETKSLISEDIRKEREGKYGSFAVNI 83

Query: 343 -----LAFPHXXXXXXXXXXXXXXXXXYWGEFPKERVDEAHRAGVKVLHQVGDLEEAAKA 507
                +  P                    G  P E +     AG  V+H+   +  A  A
Sbjct: 84  TLLPSINPPDYVGYAKAALEEGVRIFETAGNNPGEVIKVVKAAGAYVIHKCTAVRHARSA 143

Query: 508 KEAGVDGIIIQGREAGGHVIGQEGXXXXXXXXXXXXXXXXXXXIAAGGIVDXXXXXXXXX 687
           +  G D + I G E  GH    E                    IA+GGI +         
Sbjct: 144 ERLGADMLSIDGFECAGH--PGEDDIGGLVLMARAAEELKIPFIASGGIANGQGLASALA 201

Query: 688 XXXXXXXXXTRFVATEESFAHPLYKKKLIEMNCTDYTNVFGRAR 819
                    TRF+ T+ES  H   K+ ++E +  + T++F   R
Sbjct: 202 LGAVGANMGTRFMCTKESEIHDNIKRAIVESDERNTTHIFRTLR 245



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>AK071795:Os07g0693200 |
          Length = 402

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 27/92 (29%), Positives = 39/92 (42%)
 Frame = -3

Query: 462 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILLVREGQHDGRPERLLGQAPGPPYQLP 283
           D   VGL    L  L    + HG  +++  P+  +   G HD R E    +AP  P +  
Sbjct: 257 DGHAVGLHHHRLLLLQQARVPHGAVVVEDGPREQVGVRGLHDLRAEGRADRAPVGPDEAR 316

Query: 282 HVIRRRPVGKAEEAYGASVGDGGGELRAGDVG 187
             +R +P+G      G  V  G GE+  G  G
Sbjct: 317 QRLRHQPLGGRHG--GHRVAAGVGEVHEGPSG 346



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>AK110223:Os01g0329300 |
          Length = 759

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = -1

Query: 653 IPPAAITKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPS-TPASLAFAASSRSPT 477
           IPPAA+ K       S        RP  P T PP S P  + P+  P + A A +   PT
Sbjct: 256 IPPAAMPKPP-----SVAPVQPPQRPPAPATKPPPSFPPQLAPTMPPPAHAPAETPAPPT 310

Query: 476 *CKTLTPARWASSTRSLGNSP 414
               L PA  A S ++  +SP
Sbjct: 311 TPPALPPATTAPSPKNSSSSP 331



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>AK070848:Os01g0141900 |
          Length = 606

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 16/90 (17%)
 Frame = -1

Query: 635 TKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSR---------- 486
           T T  S   +T   +  SRPS P    P SR      STP     A S++          
Sbjct: 285 TPTSRSSIPATRSSTPSSRPSIPAQSKPVSRS-----STPTRRPSATSTQHGSLAAPVRS 339

Query: 485 ------SPT*CKTLTPARWASSTRSLGNSP 414
                 +PT  K+ +PA+  +ST S G+SP
Sbjct: 340 TSISKPAPTMSKSSSPAKTIASTPSRGSSP 369



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>AK110196:Os05g0516400 |
          Length = 827

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = -1

Query: 653 IPPAAITKTVLSETRSTTLGSNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT* 474
           +PPA    +  +     T   + + P  P T PP+  P   +PS P   A A +++ P  
Sbjct: 166 LPPATSPPSPANPLPPATSPPSPANPLPPTTSPPSPAPPPTVPSQPPEAAPAPTTKPPP- 224

Query: 473 CKTLTPAR 450
              L PAR
Sbjct: 225 -TPLPPAR 231



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>Os12g0228300:Os12g0228300 |
          Length = 1132

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -3

Query: 303 GPPYQLPHVIRRRPVGKAEEAYGASVGDGGGELRAGDVGAE 181
           G P+ L    RRRP  +     G + GDGGGE R    G E
Sbjct: 22  GIPHALALTARRRPTNRPARPRGEN-GDGGGERRRQRTGVE 61



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>AK109861:Os12g0117500 |
          Length = 173

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +1

Query: 481 GDLEEAAKAKEAGVDGIIIQGREAGGH 561
           GD+EEAA+  E G +G +++GRE G H
Sbjct: 62  GDMEEAAE--ERGGEGRVVRGREHGNH 86



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>AK070117:Os06g0572000 |
          Length = 85

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -1

Query: 578 PS*PITCPPASRP*MIIPS-----TPASLAFAASSRSPT*CKTLTPARWASSTRSLGN 420
           PS   T PP +   ++ PS      PASLAF +   +P+ C  L      +++RSLG+
Sbjct: 22  PSDATTLPPPTLADLLHPSHRDAAPPASLAFGSPPPAPSLCDPLAIFDTVAASRSLGS 79



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>AK110283: |
          Length = 501

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -1

Query: 653 IPPAAITKTVLSETRSTTLG-SNGSRPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT 477
           +PP+  T +    T S + G  +   P+ PI  PP+S P   IP+TPA      ++ + T
Sbjct: 311 LPPSGSTSSPTGSTSSPSGGIPHHVPPNKPIPAPPSS-PLPPIPTTPAPTPTPTATPTAT 369

Query: 476 *CKTLTPA 453
              T+ PA
Sbjct: 370 PTTTVPPA 377



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>AY360145:Os05g0148600 |
          Length = 544

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 462 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 358
           D  +  ++DPLLG L       G+P  Q+N Q+LL
Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489



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>AK104336:Os05g0148600 |
          Length = 544

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 462 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 358
           D  +  ++DPLLG L       G+P  Q+N Q+LL
Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489



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>AK066168:Os05g0148600 |
          Length = 544

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 462 DAGTVGLVDPLLGELAPVHLQHGEPLLQHNPQILL 358
           D  +  ++DPLLG L       G+P  Q+N Q+LL
Sbjct: 455 DLSSQSIIDPLLGSLLGSDFDVGQPSPQNNLQLLL 489



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>Os06g0542700:Os06g0542700 |
          Length = 284

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -1

Query: 1085 VTSLSTTSLAGTISVISPTPWPAYIAMLWISPVVVALG 972
            + SL   SL+   +V+SP PW +++  +W+ P ++  G
Sbjct: 241  IYSLENNSLS---NVVSPEPWKSWLPPIWMMPNLMKTG 275



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>AK066544:Os07g0102100 |
          Length = 808

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 26/95 (27%), Positives = 40/95 (42%)
 Frame = -1

Query: 761 LYSGCAKLSSVATNLVPKQTXXXXXXXXXXXXXPSTIPPAAITKTVLSETRSTTLGSNGS 582
           ++   A  SS AT+  P  T              ++   +  + T  S + S+   S  +
Sbjct: 14  VWPSSASASSTATSAPPHSTSTPPPSTAASATPTTSSASSPSSSTASSSSPSS---STST 70

Query: 581 RPS*PITCPPASRP*MIIPSTPASLAFAASSRSPT 477
            PS P T   A+    + PSTP+S A   S+ SPT
Sbjct: 71  SPSAPTTTETAA----LSPSTPSSPATPRSASSPT 101



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>Os09g0365900:Os09g0365900 |
          Length = 577

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 80  PPPAAGRTALTIRLGRKWGGRASWASTTAS 169
           PPP + RT L +    K GG+  WA    S
Sbjct: 368 PPPTSDRTILLLNTQNKIGGQIKWALNNVS 397



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>AK073993:Os03g0618900 |
          Length = 271

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 1028 PWPAYIAMLWISPVVVALGTVPANRRISLCTPWMIEWPII 909
            P P  +A  W+S +   L      RR  +C PWMIE+ ++
Sbjct: 210  PEPLLLATDWLSRLHFFLNP----RRSMICKPWMIEYSLV 245



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>AK073691:Os08g0533700 |
          Length = 238

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -3

Query: 315 GQAPGPPYQLPHVIRRRPVGKAEEAYGASVGDGGGELRAGDVGAERCLHDAVVEAH 148
           G+ PG P  L   +RRRP+   +      VG      +  D+GA   L DA  +AH
Sbjct: 94  GEKPGSPISLSSGLRRRPIAHTD------VGPSSHARKDRDIGAPIKL-DAEAQAH 142



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>AK073544:Os01g0895300 |
          Length = 376

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
 Frame = -3

Query: 384 LQHNPQILLVREGQHDGRPERLLGQAPGPPYQLPHVIRR-------RPV-GKAEEAYGAS 229
           L+   ++ + R   H G P R   QA    +  PH++RR       RP+  + E     +
Sbjct: 14  LEPRGEVSVERLVLHSGEPRRRRQQAHPLRHLQPHLLRRMELRELHRPLYEQREHVELRA 73

Query: 228 VGDGGGELRAGDVGAER 178
           VG G G +R G V A R
Sbjct: 74  VGAGQGRVRGGGVLAGR 90



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>AK070064:Os01g0939100 |
          Length = 1043

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +1

Query: 427 KERVDEAHRAGVKVLHQVGDLEEAAK--AKEAGV---DGIIIQGRE 549
           +E V   H AG+ V    GD    AK  A+E G+   DGI I+G E
Sbjct: 669 REAVATCHAAGINVRMVTGDNINTAKAIARECGILTDDGIAIEGPE 714


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 37,475,469
Number of extensions: 873345
Number of successful extensions: 3239
Number of sequences better than 10.0: 21
Number of HSP's gapped: 3230
Number of HSP's successfully gapped: 22
Length of query: 451
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 347
Effective length of database: 11,235,591
Effective search space: 3898750077
Effective search space used: 3898750077
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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