>Q8CHZ9:MTERF_MOUSE Transcription termination factor, mitochondrial precursor - Mus|
           musculus (Mouse)
          Length = 379
 Score = 38.1 bits (87), Expect = 0.097
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
 Frame = +2

Query: 395 DVAALVARDPK-FLCSGVDKGLSPIVAGLSGLGLSHSEIARLLSHSPNSF-RCRSIVPKL 568
           ++  ++ R P+ F  S  +  L   +  L  +GL+H  + RLL+++P +F    ++  ++
Sbjct: 137 EIVNILERSPESFFRSNNNLNLENNIKFLCSVGLTHKCLCRLLTNAPRTFSNSLNLNKQM 196

Query: 569 QYYLPLFGSS-------EKLLRAINFNTSLLVYKSK-VELNVAFLREC-GLGDRDIAKL- 718
             +L   G S       + + + I+ N S+L+  +K V+ N+ FL+    L  RD+  L 
Sbjct: 197 VEFLQETGMSLGHNDPRDFVRKIISKNPSILIQSTKRVKTNIEFLQSTFNLNKRDLLLLI 256

Query: 719 CVSIPRMVTTNLECVRTMVA------LTEGLGVPRGSRMFRHALSALAFLDEKKIAAKVD 880
           C    R++  + +C +          L+ G       R     L+ + FL EKK   K+D
Sbjct: 257 CGPGARILDLSNDCTKKNYTNIRERLLSLGCSEEEVQRFVLSYLN-MVFLSEKKFNDKID 315

Query: 881 YL 886
            L
Sbjct: 316 CL 317

>Q9EPI8:MTERF_RAT Transcription termination factor, mitochondrial precursor - Rattus|
           norvegicus (Rat)
          Length = 374

 Score = 33.9 bits (76), Expect = 1.8
 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
 Frame = +2

Query: 395 DVAALVARDPK-FLCSGVDKGLSPIVAGLSGLGLSHSEIARLLSHSPNSF-RCRSIVPKL 568
           ++  ++ R P+ F  S  +  L   +  L  +GL+H  + RLL+ +P +F    ++  ++
Sbjct: 132 EIVNILERSPESFFRSNNNLNLENNIKFLCSVGLTHKCLCRLLTSAPRTFSNSLNLNKQM 191

Query: 569 QYYLPLFGSS-------EKLLRAINFNTSLLVYKSK-VELNVAFLRECGLGDRDIAKLCV 724
             +L   G S       + + + I+ N S+L+  +K V+ N+ FL+     D++   L +
Sbjct: 192 VEFLQETGISLGHNNPTDFVRKIISKNPSILIQSTKRVKTNIEFLQSTFNLDKEDLLLLI 251

Query: 725 SIP--RMVTTNLECVRTMVALTEGLGVPRG---SRMFRHALSAL--AFLDEKKIAAKVDY 883
             P  R++  + +C +      +   +  G     + +  LS L   FL EKK   K+D 
Sbjct: 252 CGPGARILDLSNDCTKRNYTNIKKRLLSLGCTEEEVQKFVLSYLNMIFLSEKKFNDKIDC 311

Query: 884 L 886
           L
Sbjct: 312 L 312

>Q5NZS1:IF2_AZOSE Translation initiation factor IF-2 - Azoarcus sp. (strain EbN1)|
           (Aromatoleum aromaticum (strain EbN1))
          Length = 945

 Score = 33.5 bits (75), Expect = 2.4
 Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
 Frame = -3

Query: 486 RPESPATMGDRPLSTPLQRNLGSLATRAATSALERPRPARKARTASGLAGDRRWE----S 319
           +PE+P     RP   PL+ ++ S   RAA     R     +AR A+ L   +  E    +
Sbjct: 195 KPEAPVRAPSRP---PLRVSILSDEERAAREREARRHQELRARQAADLKAKQDREAAARA 251

Query: 318 LGEALRA--WARVKPQAETR*SSAAKPVVGEMLGAVASDMRR 199
             EA RA   ARV+ +AE R + AAKP   E   A A  + R
Sbjct: 252 AAEARRAEEEARVRAEAERR-AEAAKPQPKEAAKAPAGTLHR 292

>Q8GXE6:AKT6_ARATH Potassium channel AKT6 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 888

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 4/154 (2%)
 Frame = -2

Query: 1006 HLRDEELGPVLQRFV*LAEQKRGLRQSNAHLVIRPP*RLLQVIHLGCDLLL---VEECES 836
            HL+D E  PV++    LA+ +  L Q    L    P  L      G DLLL   +    S
Sbjct: 517  HLKDSE-DPVMKGV--LADTEHMLAQGKMDL----PLSLCFAAARGDDLLLHQLLRRGSS 569

Query: 835  TQSMPEHSRSPGHTQTFGQCHHCPDTLQVGGDHPRYRDAQLGNVAITQPTLTQERDIELH 656
               M +  R+  H       H+C   L   G  P  RD++ GNV + +  + + R+I   
Sbjct: 570  PNEMDKDGRTALHIAASKGSHYCVVLLLEHGADPNIRDSE-GNVPLWEAIIGRHREIAKL 628

Query: 655  LALVYEEGG-VEVDSPEQLLGGAEEGQVVLQLGD 557
            LA   E G  + +DS     G A E   +  L D
Sbjct: 629  LA---ENGAKLSLDSVSYFSGLAVEKNCLDALKD 659

>Q7RRM4:TIP_PLAYO T-cell immunomodulatory protein homolog precursor - Plasmodium yoelii|
            yoelii
          Length = 701

 Score = 32.7 bits (73), Expect = 4.1
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +2

Query: 998  SEVGLEPAYIAHRPVMLCYSLEGRMRPRHYVVKFLKENGMLKRDPSYYTVF 1150
            S++G++ +  AH P+ L Y L G  R  +YV +F    GM   + SYY ++
Sbjct: 576  SKIGIQKSQSAHSPLQLPYVLFGLGRTSNYVEEFYV--GMPTHEHSYYNMW 624

>P41073:PEP_DROME Zinc finger protein on ecdysone puffs - Drosophila melanogaster|
           (Fruit fly)
          Length = 716

 Score = 32.0 bits (71), Expect = 6.9
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
 Frame = -3

Query: 531 GECERRRAISECDKPRPESPATMGDRPLSTPLQRNLGSLATR---AATSALERPRPARKA 361
           GE E     +    P P  PA     P  TP +    +       AATSA   P PA+KA
Sbjct: 632 GEQEPEPEPAPVQTPAPAEPAPPAKTPAKTPTKAAAPAAVASPAAAATSADASPSPAKKA 691

Query: 360 RTASGLAG 337
             A   AG
Sbjct: 692 TPARAAAG 699

>Q2GBD2:TOLB1_NOVAD Protein tolB 1 precursor - Novosphingobium aromaticivorans (strain|
           DSM 12444)
          Length = 451

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -3

Query: 417 LATRAATSALERPRPARKARTASGLAGDRRWESLGEALRAWARVKPQAETR*SSAAKPVV 238
           LA   A +    P+PA +   +  ++ D  W+ LG A+ A+A       T  S+ +   +
Sbjct: 12  LAAAPAQAQQTEPQPAEEGGLSGTVSDDSEWQDLGIAIPAFA-TNADVPTPTSAGSTSAL 70

Query: 237 GEMLGAVAS-DMRRRG 193
           G+ L  V S ++R  G
Sbjct: 71  GQALAQVISANLRNNG 86

>Q7TU44:CH602_PROMP 60 kDa chaperonin 2 - Prochlorococcus marinus subsp. pastoris|
           (strain CCMP 1378 / MED4)
          Length = 544

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = +2

Query: 632 SLLVYKSKVELNVAFLRECGLGDRDIAKL---CVSIPRMVTTNLECVRTMVALTEGLGVP 802
           +L+V + +  LNVA ++  G GDR  A L    V     + T    ++   A  E LG  
Sbjct: 260 TLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLITEDAGLKLENATLEMLGTG 319

Query: 803 RGSRMFRHALSALAFLDEKKIAAKVDYLKKTLGWSD 910
           R   + +   + +A  +EK + A+ D +KK +  +D
Sbjct: 320 RRITINKETTTIVAEGNEKAVTARCDQIKKQMDETD 355

>O88751:CABP1_RAT Calcium-binding protein 1 - Rattus norvegicus (Rat)|
          Length = 298

 Score = 31.6 bits (70), Expect = 9.1
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
 Frame = -3

Query: 489 PRPESPATMGD----RPLSTPLQRNLGSLATRAATSALERPRPARKARTASGLAGDRRWE 322
           P P+SPAT GD    RPL  P+ R+ G+  +R         RP      A G  G+ R  
Sbjct: 45  PCPDSPATCGDPSSRRPLCRPVPRDEGARGSRRGLPQ-AHCRPRETLPPARGRDGEERGL 103

Query: 321 SLGEALRAWARVKPQAE 271
           +   +LR   R + + +
Sbjct: 104 APALSLRGSLRSRGRGD 120


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 221,261,018
Number of extensions: 4855011
Number of successful extensions: 13744
Number of sequences better than 10.0: 9
Number of HSP's gapped: 13735
Number of HSP's successfully gapped: 9
Length of query: 497
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 380
Effective length of database: 68,593,924
Effective search space: 26065691120
Effective search space used: 26065691120
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)