ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96o05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100730:Os07g0645400 | 880 | 0.0 | 2 | AK065185:Os07g0645400 | 880 | 0.0 | 3 | AK119179:Os07g0645400 | 627 | e-180 | 4 | AK101627:Os01g0759700 | 31 | 2.5 | 5 | AK072034:Os01g0759700 | 31 | 2.5 | 6 | AK065835:Os11g0471300 | 31 | 3.3 | 7 | Os01g0263000:Os01g0263000 | 30 | 4.3 | 8 | Os07g0104400:Os07g0104400 | 30 | 5.7 | 9 | AK110142: | 30 | 7.4 | 10 | AK109567:Os02g0121900 | 30 | 7.4 | 11 | AK102535:Os01g0679200 | 30 | 7.4 | 12 | AK105363:Os01g0543100 | 29 | 9.7 |
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>AK100730:Os07g0645400 | Length = 504 Score = 880 bits (2274), Expect(2) = 0.0 Identities = 419/431 (97%), Positives = 429/431 (99%) Frame = +2 Query: 251 PEKTHFGDLKDEDRIFTNLYGLHDPFLKGAMKRGDWNRTKDLVIKGADWIVNEMKKSGLR 430 PEKTHFGDLKDEDRIFTNLYG HDPFLKGAMKRGDW+RTKDLV+KGADWIVNEMKKSGLR Sbjct: 68 PEKTHFGDLKDEDRIFTNLYGQHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEMKKSGLR 127 Query: 431 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 610 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG Sbjct: 128 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 187 Query: 611 VGMRASAAYIYIRGEYVNERLNLEKARQEAYASGLLGKNACGSGYDFDVHIHFGAGAYIC 790 VGMRASAAYIYIRGEYVNERLNL KAR+EAYA+GLLGKNACGSGYDFDVHIHFGAGAYIC Sbjct: 188 VGMRASAAYIYIRGEYVNERLNLLKAREEAYAAGLLGKNACGSGYDFDVHIHFGAGAYIC 247 Query: 791 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 970 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG Sbjct: 248 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 307 Query: 971 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 1150 RKNNSGTKL+C+SGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLA+IPGGSSVPL Sbjct: 308 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAIIPGGSSVPL 367 Query: 1151 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 1330 LPKHICDDVLMDYDALKAVQSGLGTAAV+VMDKSTDVVDAIARLSYFYKHESCGQCTPCR Sbjct: 368 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 427 Query: 1331 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 1510 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL Sbjct: 428 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 487 Query: 1511 ERRIRDRADRE 1543 ERRIR+RA+RE Sbjct: 488 ERRIRERAERE 498 Score = 75.9 bits (185), Expect(2) = 0.0 Identities = 42/58 (72%), Positives = 44/58 (75%) Frame = +3 Query: 102 MALRWALFRSAEISPGRKAAFEYLHSLSRAQPTRSPSCADLYPAGRSFSTQRRLTLVT 275 MALR AL RSAEISP RKAA EYLH LSRAQPTRS + A LY AG+SFSTQ T T Sbjct: 1 MALRRALLRSAEISPDRKAALEYLHYLSRAQPTRSLTGAGLYSAGKSFSTQAATTSST 58
>AK065185:Os07g0645400 | Length = 504 Score = 880 bits (2274), Expect(2) = 0.0 Identities = 419/431 (97%), Positives = 429/431 (99%) Frame = +2 Query: 251 PEKTHFGDLKDEDRIFTNLYGLHDPFLKGAMKRGDWNRTKDLVIKGADWIVNEMKKSGLR 430 PEKTHFGDLKDEDRIFTNLYG HDPFLKGAMKRGDW+RTKDLV+KGADWIVNEMKKSGLR Sbjct: 68 PEKTHFGDLKDEDRIFTNLYGQHDPFLKGAMKRGDWHRTKDLVLKGADWIVNEMKKSGLR 127 Query: 431 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 610 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG Sbjct: 128 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 187 Query: 611 VGMRASAAYIYIRGEYVNERLNLEKARQEAYASGLLGKNACGSGYDFDVHIHFGAGAYIC 790 VGMRASAAYIYIRGEYVNERLNL KAR+EAYA+GLLGKNACGSGYDFDVHIHFGAGAYIC Sbjct: 188 VGMRASAAYIYIRGEYVNERLNLLKAREEAYAAGLLGKNACGSGYDFDVHIHFGAGAYIC 247 Query: 791 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 970 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG Sbjct: 248 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFG 307 Query: 971 RKNNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPL 1150 RKNNSGTKL+C+SGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLA+IPGGSSVPL Sbjct: 308 RKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAIIPGGSSVPL 367 Query: 1151 LPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 1330 LPKHICDDVLMDYDALKAVQSGLGTAAV+VMDKSTDVVDAIARLSYFYKHESCGQCTPCR Sbjct: 368 LPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCR 427 Query: 1331 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 1510 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL Sbjct: 428 EGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 487 Query: 1511 ERRIRDRADRE 1543 ERRIR+RA+RE Sbjct: 488 ERRIRERAERE 498 Score = 75.9 bits (185), Expect(2) = 0.0 Identities = 42/58 (72%), Positives = 44/58 (75%) Frame = +3 Query: 102 MALRWALFRSAEISPGRKAAFEYLHSLSRAQPTRSPSCADLYPAGRSFSTQRRLTLVT 275 MALR AL RSAEISP RKAA EYLH LSRAQPTRS + A LY AG+SFSTQ T T Sbjct: 1 MALRRALLRSAEISPDRKAALEYLHYLSRAQPTRSLTGAGLYSAGKSFSTQAATTSST 58
>AK119179:Os07g0645400 | Length = 315 Score = 627 bits (1618), Expect = e-180 Identities = 300/309 (97%), Positives = 308/309 (99%) Frame = +2 Query: 617 MRASAAYIYIRGEYVNERLNLEKARQEAYASGLLGKNACGSGYDFDVHIHFGAGAYICGE 796 MRASAAYIYIRGEYVNERLNL KAR+EAYA+GLLGKNACGSGYDFDVHIHFGAGAYICGE Sbjct: 1 MRASAAYIYIRGEYVNERLNLLKAREEAYAAGLLGKNACGSGYDFDVHIHFGAGAYICGE 60 Query: 797 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRK 976 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRK Sbjct: 61 ETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRK 120 Query: 977 NNSGTKLYCISGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLP 1156 NNSGTKL+C+SGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLA+IPGGSSVPLLP Sbjct: 121 NNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIEKHCGGVRGGWDNLLAIIPGGSSVPLLP 180 Query: 1157 KHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 1336 KHICDDVLMDYDALKAVQSGLGTAAV+VMDKSTDVVDAIARLSYFYKHESCGQCTPCREG Sbjct: 181 KHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG 240 Query: 1337 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 1516 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER Sbjct: 241 TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 300 Query: 1517 RIRDRADRE 1543 RIR+RA+RE Sbjct: 301 RIRERAERE 309
>AK101627:Os01g0759700 | Length = 195 Score = 31.2 bits (69), Expect = 2.5 Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 11/98 (11%) Frame = -3 Query: 969 PKLANHSGPRLRIVGDTATVSTFVTVVGQPYSPALA----GKGGF-----SLGLPCLPSR 817 P A S P + G+ + + P SP LA G+ S GLP LPSR Sbjct: 33 PAAATSSSPSPQTEGEGSNPNPNAAASSAPPSPPLAEDPAGRRTLASPYPSPGLPPLPSR 92 Query: 816 LSSR--AVSSPQMYAPAPKCICTSKS*PDPQAFLPRSP 709 SS A+SSP PA P A LPR P Sbjct: 93 RSSSPFAISSPSPLRPAAAM---------PPADLPRPP 121
>AK072034:Os01g0759700 | Length = 443 Score = 31.2 bits (69), Expect = 2.5 Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 11/98 (11%) Frame = -3 Query: 969 PKLANHSGPRLRIVGDTATVSTFVTVVGQPYSPALA----GKGGF-----SLGLPCLPSR 817 P A S P + G+ + + P SP LA G+ S GLP LPSR Sbjct: 33 PAAATSSSPSPQTEGEGSNPNPNAAASSAPPSPPLAEDPAGRRTLASPYPSPGLPPLPSR 92 Query: 816 LSSR--AVSSPQMYAPAPKCICTSKS*PDPQAFLPRSP 709 SS A+SSP PA P A LPR P Sbjct: 93 RSSSPFAISSPSPLRPAAAM---------PPADLPRPP 121
>AK065835:Os11g0471300 | Length = 192 Score = 30.8 bits (68), Expect = 3.3 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 9/75 (12%) Frame = -2 Query: 1594 IKSANKKWCLCRSCHQQLPISTIADPPLQLRSE---------VPDKTLHRPCCSIPEGTD 1442 ++S KK C + ++ ++ +A+ PLQLRS +P TLHR + EG Sbjct: 14 VRSRKKKNCGRKK--NEINLTDVANVPLQLRSTLRSFASASGIPKNTLHR---MLIEGLL 68 Query: 1441 RVAFNLLRDLLKHIN 1397 R N L+ LLK N Sbjct: 69 RRHSNTLKPLLKEEN 83
>Os01g0263000:Os01g0263000 | Length = 347 Score = 30.4 bits (67), Expect = 4.3 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = +2 Query: 884 CPTTVTNVETVAVSP---TILRRGPEWFASFGRKNNSGTKLYCISGHVNKP 1027 CP TV+ +T+A++ T+L GP W GRK++ + + ++ P Sbjct: 132 CPHTVSCADTIALAARGSTVLSGGPYWELPLGRKDSKAAYMKLANKNLPPP 182
>Os07g0104400:Os07g0104400 | Length = 349 Score = 30.0 bits (66), Expect = 5.7 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Frame = +2 Query: 812 ESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAV---SPTILRRGPEWFASFGRKNN 982 +SL G R+K A CP TV+ + +A+ +L +GP W GR++ Sbjct: 115 KSLRGFDSVARVKAKLEA-----ACPATVSCADLLALMARDAVVLAKGPYWHVPLGRRDG 169 Query: 983 SGTKLYCISGHVNKPC 1030 + G + C Sbjct: 170 RSSTAASCGGQLPPLC 185
>AK110142: | Length = 966 Score = 29.6 bits (65), Expect = 7.4 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -3 Query: 888 GQPYSPALAGKGGFSLGLPCLPSRLSSRAVSSPQMYAPA 772 G P P A +G P PSRL+S S P +PA Sbjct: 715 GSPMPPHRAPASAGGMGSPSQPSRLASNPASYPSQASPA 753
>AK109567:Os02g0121900 | Length = 624 Score = 29.6 bits (65), Expect = 7.4 Identities = 22/60 (36%), Positives = 26/60 (43%) Frame = +3 Query: 18 RFSSPQHNSLSLFFFFQIRRTRGQPEAEMALRWALFRSAEISPGRKAAFEYLHSLSRAQP 197 R SP +S + +RR G+ A AL AL RS SP LH LS A P Sbjct: 74 RIPSPTPHSFNSLLAALLRR--GRRRAASALFAALLRSPSASPDAATLNTLLHGLSTASP 131
>AK102535:Os01g0679200 | Length = 234 Score = 29.6 bits (65), Expect = 7.4 Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 14/101 (13%) Frame = -3 Query: 1209 CTAFSAS*SINTSSHMCFGKRGTDE---------PPGITASRLSHPPLTPPQCFSINSFR 1057 CT S S S +S + G+ +E PP ++ SR HPP PP C + R Sbjct: 31 CTCLSLSPSPPLASPVASGREDDEEGRLSRRRCPPPHLSLSR-RHPPRPPPSCHHYHPPR 89 Query: 1056 GILISSSTVQGLFT*PEIQYSFVPE-----LFLRPKLANHS 949 L +G + SFV E LRP++ S Sbjct: 90 RSLSLQRRTEGDEEDRRGRRSFVGEGDEESRLLRPRIRRRS 130
>AK105363:Os01g0543100 | Length = 340 Score = 29.3 bits (64), Expect = 9.7 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +2 Query: 884 CPTTVTNVETVAVSP---TILRRGPEWFASFGRKNNSGTKLYCISGHVNKP 1027 CP TV+ + +A++ T++ GP W GR+++ G + + + P Sbjct: 125 CPHTVSCADILALAARDSTVMTGGPGWIVPLGRRDSRGASVQGSNNDIPAP 175 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 55,351,869 Number of extensions: 1361578 Number of successful extensions: 4115 Number of sequences better than 10.0: 12 Number of HSP's gapped: 4113 Number of HSP's successfully gapped: 14 Length of query: 608 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 502 Effective length of database: 11,155,509 Effective search space: 5600065518 Effective search space used: 5600065518 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
