ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96n20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AY224468:Os03g0202200 | 56 | 2e-08 | 2 | AK121020:Os03g0202200 | 56 | 2e-08 | 3 | AK071833:Os05g0536200 | 44 | 1e-04 | 4 | AJ251562:Os05g0536200 | 44 | 1e-04 | 5 | AK100231:Os03g0137500 | 40 | 8e-04 | 6 | AK073584:Os03g0137500 | 40 | 8e-04 | 7 | AK060148:Os03g0137500 | 40 | 8e-04 | 8 | Y18104:Os09g0361400 | 40 | 0.001 | 9 | AK061261:Os09g0361400 | 40 | 0.001 | 10 | AK060652:Os09g0361400 | 40 | 0.001 | 11 | Os01g0715500:Os01g0715500 | 38 | 0.004 | 12 | AK104419:Os01g0588200 | 37 | 0.012 | 13 | AK104055:Os01g0588200 | 37 | 0.012 | 14 | AK070745:Os01g0588200 | 37 | 0.012 | 15 | AJ251563:Os01g0588200 | 37 | 0.012 | 16 | AK120120:Os02g0617300 | 29 | 2.5 | 17 | AK067375:Os03g0157800 | 29 | 2.5 | 18 | AY224559:Os12g0596800 | 28 | 4.2 | 19 | AY224475:Os12g0596800 | 28 | 4.2 | 20 | AK065760:Os12g0596800 | 28 | 4.2 | 21 | AK062035:Os12g0596800 | 28 | 4.2 | 22 | AK061488:Os04g0649900 | 28 | 4.3 | 23 | Os07g0113500:Os07g0113500 | 28 | 5.5 | 24 | AK106389:Os05g0197300 | 27 | 7.2 | 25 | AK108668: | 27 | 9.4 |
|---|
>AY224468:Os03g0202200 | Length = 277 Score = 55.8 bits (133), Expect = 2e-08 Identities = 24/27 (88%), Positives = 27/27 (100%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQKL 173 KGPGLF+DIGK+AKDLLT+DYTYDQKL Sbjct: 4 KGPGLFSDIGKRAKDLLTKDYTYDQKL 30
>AK121020:Os03g0202200 | Length = 277 Score = 55.8 bits (133), Expect = 2e-08 Identities = 24/27 (88%), Positives = 27/27 (100%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQKL 173 KGPGLF+DIGK+AKDLLT+DYTYDQKL Sbjct: 4 KGPGLFSDIGKRAKDLLTKDYTYDQKL 30
>AK071833:Os05g0536200 | Length = 280 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +3 Query: 96 GPGLFTDIGKKAKDLLTRDYTYDQK 170 GPGL++DIGKKA+DLL RDY DQK Sbjct: 9 GPGLYSDIGKKARDLLYRDYHTDQK 33
>AJ251562:Os05g0536200 | Length = 280 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = +3 Query: 96 GPGLFTDIGKKAKDLLTRDYTYDQK 170 GPGL++DIGKKA+DLL RDY DQK Sbjct: 9 GPGLYSDIGKKARDLLYRDYHTDQK 33
>AK100231:Os03g0137500 | Length = 276 Score = 40.4 bits (93), Expect = 8e-04 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQK 170 KGP F +IGK+AKDLL +DY +DQK Sbjct: 3 KGPAPFLNIGKRAKDLLYKDYNFDQK 28
>AK073584:Os03g0137500 | Length = 276 Score = 40.4 bits (93), Expect = 8e-04 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQK 170 KGP F +IGK+AKDLL +DY +DQK Sbjct: 3 KGPAPFLNIGKRAKDLLYKDYNFDQK 28
>AK060148:Os03g0137500 | Length = 276 Score = 40.4 bits (93), Expect = 8e-04 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQK 170 KGP F +IGK+AKDLL +DY +DQK Sbjct: 3 KGPAPFLNIGKRAKDLLYKDYNFDQK 28
>Y18104:Os09g0361400 | Length = 274 Score = 39.7 bits (91), Expect = 0.001 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +3 Query: 96 GPGLFTDIGKKAKDLLTRDYTYDQK 170 GPGL+ +IGKKA+DLL RDY D K Sbjct: 3 GPGLYPEIGKKARDLLYRDYQTDHK 27
>AK061261:Os09g0361400 | Length = 274 Score = 39.7 bits (91), Expect = 0.001 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +3 Query: 96 GPGLFTDIGKKAKDLLTRDYTYDQK 170 GPGL+ +IGKKA+DLL RDY D K Sbjct: 3 GPGLYPEIGKKARDLLYRDYQTDHK 27
>AK060652:Os09g0361400 | Length = 274 Score = 39.7 bits (91), Expect = 0.001 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +3 Query: 96 GPGLFTDIGKKAKDLLTRDYTYDQK 170 GPGL+ +IGKKA+DLL RDY D K Sbjct: 3 GPGLYPEIGKKARDLLYRDYQTDHK 27
>Os01g0715500:Os01g0715500 | Length = 280 Score = 38.1 bits (87), Expect = 0.004 Identities = 16/25 (64%), Positives = 21/25 (84%) Frame = +3 Query: 96 GPGLFTDIGKKAKDLLTRDYTYDQK 170 GPGL+ +IGKKA+DLL +D+ DQK Sbjct: 44 GPGLYFEIGKKARDLLYKDFHTDQK 68
>AK104419:Os01g0588200 | Length = 275 Score = 36.6 bits (83), Expect = 0.012 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = +3 Query: 99 PGLFTDIGKKAKDLLTRDY 155 PGL+TDIGKK +DLL RDY Sbjct: 3 PGLYTDIGKKTRDLLYRDY 21
>AK104055:Os01g0588200 | Length = 275 Score = 36.6 bits (83), Expect = 0.012 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = +3 Query: 99 PGLFTDIGKKAKDLLTRDY 155 PGL+TDIGKK +DLL RDY Sbjct: 3 PGLYTDIGKKTRDLLYRDY 21
>AK070745:Os01g0588200 | Length = 275 Score = 36.6 bits (83), Expect = 0.012 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = +3 Query: 99 PGLFTDIGKKAKDLLTRDY 155 PGL+TDIGKK +DLL RDY Sbjct: 3 PGLYTDIGKKTRDLLYRDY 21
>AJ251563:Os01g0588200 | Length = 275 Score = 36.6 bits (83), Expect = 0.012 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = +3 Query: 99 PGLFTDIGKKAKDLLTRDY 155 PGL+TDIGKK +DLL RDY Sbjct: 3 PGLYTDIGKKTRDLLYRDY 21
>AK120120:Os02g0617300 | Length = 844 Score = 28.9 bits (63), Expect = 2.5 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 Query: 542 RVPPINLGQHETTLLYKDTTTRFSHRIRVPSSQHILRAQ 426 R+P + + +H + Y+D + R H +VP Q LR Q Sbjct: 130 RMPQMQMDRHYLDMTYRDASHRNLHNHQVPHFQRPLRKQ 168
>AK067375:Os03g0157800 | Length = 600 Score = 28.9 bits (63), Expect = 2.5 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 309 AREEPSEGY*IVRPDGKRRDSTGIESSRGSGT 214 A EE +G+ +VR K+R + G S GSGT Sbjct: 21 AAEEAGDGFQVVRGKKKKRPNGGSASGAGSGT 52
>AY224559:Os12g0596800 | Length = 174 Score = 28.1 bits (61), Expect = 4.2 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%) Frame = +3 Query: 321 WVPHCCTS---SSTPVCSESPRLLGIDVSVLNADGGRALC 431 W+ C S TP C R+ +D+ + D GR LC Sbjct: 80 WMQKYCPSHEDDGTPRCCSCERMEPMDIKYITLDDGRKLC 119
>AY224475:Os12g0596800 | Length = 174 Score = 28.1 bits (61), Expect = 4.2 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%) Frame = +3 Query: 321 WVPHCCTS---SSTPVCSESPRLLGIDVSVLNADGGRALC 431 W+ C S TP C R+ +D+ + D GR LC Sbjct: 80 WMQKYCPSHEDDGTPRCCSCERMEPMDIKYITLDDGRKLC 119
>AK065760:Os12g0596800 | Length = 486 Score = 28.1 bits (61), Expect = 4.2 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%) Frame = +3 Query: 321 WVPHCCTS---SSTPVCSESPRLLGIDVSVLNADGGRALC 431 W+ C S TP C R+ +D+ + D GR LC Sbjct: 202 WMQKYCPSHEDDGTPRCCSCERMEPMDIKYITLDDGRKLC 241
>AK062035:Os12g0596800 | Length = 431 Score = 28.1 bits (61), Expect = 4.2 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%) Frame = +3 Query: 321 WVPHCCTS---SSTPVCSESPRLLGIDVSVLNADGGRALC 431 W+ C S TP C R+ +D+ + D GR LC Sbjct: 147 WMQKYCPSHEDDGTPRCCSCERMEPMDIKYITLDDGRKLC 186
>AK061488:Os04g0649900 | Length = 318 Score = 28.1 bits (61), Expect = 4.3 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 327 EPNLLIAREEPSEGY*IVRPDGKRRDSTGIESSRGSGTGS 208 + N + PS G+ +VRPDG+R + S +GT S Sbjct: 274 DENRVAGSGTPSLGHFVVRPDGRRDAFCSGQDSTAAGTSS 313
>Os07g0113500:Os07g0113500 | Length = 634 Score = 27.7 bits (60), Expect = 5.5 Identities = 15/21 (71%), Positives = 16/21 (76%), Gaps = 1/21 (4%) Frame = +2 Query: 155 HLRP-EALRLHRQLLRSGKDP 214 H RP EALRL R +LRSG DP Sbjct: 239 HGRPNEALRLFRWMLRSGVDP 259
>AK106389:Os05g0197300 | Length = 556 Score = 27.3 bits (59), Expect = 7.2 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Frame = +2 Query: 95 GTGPLHR----HRQEGQGSAHQGLHLRPEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRL 262 GTGP R + Q+ Q A + ++L P +DPVP PR +LS RL Sbjct: 474 GTGPRIRCVRDYPQDLQSRALEHVNLSPRLAAAGVAPATRKRDPVPSPRPSPGMILSPRL 533 Query: 263 PS 268 S Sbjct: 534 AS 535
>AK108668: | Length = 282 Score = 26.9 bits (58), Expect = 9.4 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +3 Query: 99 PGLFTDIGKKAKDLLTRDYTY 161 P + D+GK AKDL + Y Y Sbjct: 3 PPQYADLGKAAKDLFNKGYNY 23 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,806,766 Number of extensions: 340656 Number of successful extensions: 1083 Number of sequences better than 10.0: 25 Number of HSP's gapped: 1081 Number of HSP's successfully gapped: 25 Length of query: 191 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 96 Effective length of database: 11,595,960 Effective search space: 1113212160 Effective search space used: 1113212160 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
